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Conserved domains on  [gi|2445360183|ref|XP_003103826|]
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hypothetical protein GCK72_007181 [Caenorhabditis remanei]

Protein Classification

DUF281 domain-containing protein( domain architecture ID 10506384)

DUF281 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF281 pfam03436
Domain of unknown function (DUF281); This family of worm domain has no known function. The ...
 78-132 1.10e-11

Domain of unknown function (DUF281); This family of worm domain has no known function. The boundaries of the presumed domain are rather uncertain.


:

Pssm-ID: 427293  Cd Length: 55  Bit Score: 56.24  E-value: 1.10e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2445360183  78 DGCIRTYTNCGRTDSLVCDSSQMFATTPTGEQEVVDETTGNAVSVTFTCANDGTY 132
Cdd:pfam03436   1 DGCITLNVKCQRTDGTVCNDISLYATTPSGTVTIGGDSPGNEAEATLTCQKDGTW 55
 
Name Accession Description Interval E-value
DUF281 pfam03436
Domain of unknown function (DUF281); This family of worm domain has no known function. The ...
 78-132 1.10e-11

Domain of unknown function (DUF281); This family of worm domain has no known function. The boundaries of the presumed domain are rather uncertain.


Pssm-ID: 427293  Cd Length: 55  Bit Score: 56.24  E-value: 1.10e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2445360183  78 DGCIRTYTNCGRTDSLVCDSSQMFATTPTGEQEVVDETTGNAVSVTFTCANDGTY 132
Cdd:pfam03436   1 DGCITLNVKCQRTDGTVCNDISLYATTPSGTVTIGGDSPGNEAEATLTCQKDGTW 55
 
Name Accession Description Interval E-value
DUF281 pfam03436
Domain of unknown function (DUF281); This family of worm domain has no known function. The ...
 78-132 1.10e-11

Domain of unknown function (DUF281); This family of worm domain has no known function. The boundaries of the presumed domain are rather uncertain.


Pssm-ID: 427293  Cd Length: 55  Bit Score: 56.24  E-value: 1.10e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2445360183  78 DGCIRTYTNCGRTDSLVCDSSQMFATTPTGEQEVVDETTGNAVSVTFTCANDGTY 132
Cdd:pfam03436   1 DGCITLNVKCQRTDGTVCNDISLYATTPSGTVTIGGDSPGNEAEATLTCQKDGTW 55
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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