hypothetical protein GCK72_018202 [Caenorhabditis remanei]
thrombospondin type-1 domain-containing protein( domain architecture ID 10641280)
thrombospondin type-1 (TSP1) domain-containing protein similar to Mus musculus thrombospondin type-1 domain-containing protein 1, which is a positive regulator of nascent focal adhesion assembly, involved in the modulation of endothelial cell attachment to the extracellular matrix
List of domain hits
Name | Accession | Description | Interval | E-value | ||
TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
25-74 | 1.99e-06 | ||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. : Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 41.03 E-value: 1.99e-06
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Name | Accession | Description | Interval | E-value | ||
TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
25-74 | 1.99e-06 | ||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 41.03 E-value: 1.99e-06
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PTZ00087 | PTZ00087 | thrombosponding-related protein; Provisional |
15-69 | 2.09e-05 | ||
thrombosponding-related protein; Provisional Pssm-ID: 185438 Cd Length: 340 Bit Score: 41.08 E-value: 2.09e-05
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
28-74 | 4.80e-03 | ||
Thrombospondin type 1 domain; Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 32.39 E-value: 4.80e-03
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Name | Accession | Description | Interval | E-value | ||
TSP1 | smart00209 | Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. |
25-74 | 1.99e-06 | ||
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta. Pssm-ID: 214559 [Multi-domain] Cd Length: 53 Bit Score: 41.03 E-value: 1.99e-06
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PTZ00087 | PTZ00087 | thrombosponding-related protein; Provisional |
15-69 | 2.09e-05 | ||
thrombosponding-related protein; Provisional Pssm-ID: 185438 Cd Length: 340 Bit Score: 41.08 E-value: 2.09e-05
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TSP_1 | pfam00090 | Thrombospondin type 1 domain; |
28-74 | 4.80e-03 | ||
Thrombospondin type 1 domain; Pssm-ID: 459668 [Multi-domain] Cd Length: 49 Bit Score: 32.39 E-value: 4.80e-03
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Blast search parameters | ||||
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