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Conserved domains on  [gi|564330205|ref|XP_006229994|]
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FHF complex subunit HOOK-interacting protein 1B isoform X3 [Rattus norvegicus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
RAI16-like pfam10257
Retinoic acid induced 16-like protein; This is the conserved N-terminal 450 residues of a ...
97-426 3.47e-116

Retinoic acid induced 16-like protein; This is the conserved N-terminal 450 residues of a family of proteins described as retinoic acid-induced protein 16-like proteins. The exact function is not known. The proteins are found from worms to humans.


:

Pssm-ID: 370927  Cd Length: 357  Bit Score: 355.48  E-value: 3.47e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564330205   97 LEFALREDLLSRVLTWQLQwdEFGDGVeerRAEQLKLFEMLVSEARQPLLRHGPVREALLALLDACGRPVPssPALDEGL 176
Cdd:pfam10257   2 LEYLLQHKILETLCTLGKA--DYPPGM---KQEVLKFYNKLLSHERQPLLHHINVHRPLQKLLRSCGEPVG--SDVEKEL 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564330205  177 VLLLSQLCVCVAREPSLLEFFLQP----------------PPEPGAAPRLLLFSRLVPFVHREGTLGQQARDALLLLMAL 240
Cdd:pfam10257  75 VQLLFGLCVKLRQDPSLLNFFFENksdqqraellvnpsveFAGATGKEDFNLFSLLLPLVHREGRLGVFAREGLLLLMSL 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564330205  241 SDGSPTVGRYIADHSYFCPVLATGLSALYSSLPRKIE---VPGDDW---HCLRREDWIGVP---ALALFMSSLEFCNAVI 311
Cdd:pfam10257 155 ASRSPTLATYLIESSDLCPLLATGLGALYSLLPTSLPaptISSIDWrldHSIAPEDLATFPgkrALDSFLSWLDFCNDLI 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564330205  312 QVAHPLVQKQLVDYIHNGFLVPVMGPALHKTSVEEMIASTAYLELFLRSISEPALLR-------TFLRFLLLHRHDTHTI 384
Cdd:pfam10257 235 QVAHSEVADALLDAIYEGFLVPVLYPSLLQTSEGSILAVTAYLDRILRSITSPALLQeflsfllGEEKSPETSDDDGHPL 314
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 564330205  385 LDTLVARIGSNS-RLCMVSLSLFRTLLNLSCEDVLLQLVLRYL 426
Cdd:pfam10257 315 RDTLIERCNHLSdELSIVTLRLFETLLQLPCEDILLDLVLRNL 357
DUF5917 pfam19314
Family of unknown function (DUF5917); This short presumed domain is found close to the ...
559-651 5.01e-39

Family of unknown function (DUF5917); This short presumed domain is found close to the C-terminus of FHIP proteins, FAM160B proteins and UPF0518 family proteins.


:

Pssm-ID: 466037  Cd Length: 94  Bit Score: 139.62  E-value: 5.01e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564330205  559 GPFMAVLFAKLENMLQNSVYVNFLLTGLVAQLACHPQPLLRSFLLNTNMVFQPSVKSLLQVLGSVKNKIESFAASQEDFP 638
Cdd:pfam19314   2 GPFLRMLFNKLENLLSQSYEVNLQLTGVISRLASYPQPLLHSYLLNPSLPLQPSVRSLYTVLSSLKEEIEERAASIPDFD 81
                          90
                  ....*....|...
gi 564330205  639 ALLSKAKKYLIAR 651
Cdd:pfam19314  82 ALLRRARKRLLGR 94
KELAA pfam19311
KELAA motif; This short motif is found at the C-terminus of FHIP proteins, FAM160B proteins ...
738-769 3.20e-08

KELAA motif; This short motif is found at the C-terminus of FHIP proteins, FAM160B proteins and UPF0518 family proteins. It has a conserved KELAA sequence for which it is named.


:

Pssm-ID: 466035  Cd Length: 32  Bit Score: 49.80  E-value: 3.20e-08
                          10        20        30
                  ....*....|....*....|....*....|..
gi 564330205  738 LRVKNAVYCAVIFPEFLKELAAISQAHAVTSP 769
Cdd:pfam19311   1 ERHKNLLEAAIVLEEFCKELAAIAFVKSHHSV 32
 
Name Accession Description Interval E-value
RAI16-like pfam10257
Retinoic acid induced 16-like protein; This is the conserved N-terminal 450 residues of a ...
97-426 3.47e-116

Retinoic acid induced 16-like protein; This is the conserved N-terminal 450 residues of a family of proteins described as retinoic acid-induced protein 16-like proteins. The exact function is not known. The proteins are found from worms to humans.


Pssm-ID: 370927  Cd Length: 357  Bit Score: 355.48  E-value: 3.47e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564330205   97 LEFALREDLLSRVLTWQLQwdEFGDGVeerRAEQLKLFEMLVSEARQPLLRHGPVREALLALLDACGRPVPssPALDEGL 176
Cdd:pfam10257   2 LEYLLQHKILETLCTLGKA--DYPPGM---KQEVLKFYNKLLSHERQPLLHHINVHRPLQKLLRSCGEPVG--SDVEKEL 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564330205  177 VLLLSQLCVCVAREPSLLEFFLQP----------------PPEPGAAPRLLLFSRLVPFVHREGTLGQQARDALLLLMAL 240
Cdd:pfam10257  75 VQLLFGLCVKLRQDPSLLNFFFENksdqqraellvnpsveFAGATGKEDFNLFSLLLPLVHREGRLGVFAREGLLLLMSL 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564330205  241 SDGSPTVGRYIADHSYFCPVLATGLSALYSSLPRKIE---VPGDDW---HCLRREDWIGVP---ALALFMSSLEFCNAVI 311
Cdd:pfam10257 155 ASRSPTLATYLIESSDLCPLLATGLGALYSLLPTSLPaptISSIDWrldHSIAPEDLATFPgkrALDSFLSWLDFCNDLI 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564330205  312 QVAHPLVQKQLVDYIHNGFLVPVMGPALHKTSVEEMIASTAYLELFLRSISEPALLR-------TFLRFLLLHRHDTHTI 384
Cdd:pfam10257 235 QVAHSEVADALLDAIYEGFLVPVLYPSLLQTSEGSILAVTAYLDRILRSITSPALLQeflsfllGEEKSPETSDDDGHPL 314
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 564330205  385 LDTLVARIGSNS-RLCMVSLSLFRTLLNLSCEDVLLQLVLRYL 426
Cdd:pfam10257 315 RDTLIERCNHLSdELSIVTLRLFETLLQLPCEDILLDLVLRNL 357
DUF5917 pfam19314
Family of unknown function (DUF5917); This short presumed domain is found close to the ...
559-651 5.01e-39

Family of unknown function (DUF5917); This short presumed domain is found close to the C-terminus of FHIP proteins, FAM160B proteins and UPF0518 family proteins.


Pssm-ID: 466037  Cd Length: 94  Bit Score: 139.62  E-value: 5.01e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564330205  559 GPFMAVLFAKLENMLQNSVYVNFLLTGLVAQLACHPQPLLRSFLLNTNMVFQPSVKSLLQVLGSVKNKIESFAASQEDFP 638
Cdd:pfam19314   2 GPFLRMLFNKLENLLSQSYEVNLQLTGVISRLASYPQPLLHSYLLNPSLPLQPSVRSLYTVLSSLKEEIEERAASIPDFD 81
                          90
                  ....*....|...
gi 564330205  639 ALLSKAKKYLIAR 651
Cdd:pfam19314  82 ALLRRARKRLLGR 94
KELAA pfam19311
KELAA motif; This short motif is found at the C-terminus of FHIP proteins, FAM160B proteins ...
738-769 3.20e-08

KELAA motif; This short motif is found at the C-terminus of FHIP proteins, FAM160B proteins and UPF0518 family proteins. It has a conserved KELAA sequence for which it is named.


Pssm-ID: 466035  Cd Length: 32  Bit Score: 49.80  E-value: 3.20e-08
                          10        20        30
                  ....*....|....*....|....*....|..
gi 564330205  738 LRVKNAVYCAVIFPEFLKELAAISQAHAVTSP 769
Cdd:pfam19311   1 ERHKNLLEAAIVLEEFCKELAAIAFVKSHHSV 32
 
Name Accession Description Interval E-value
RAI16-like pfam10257
Retinoic acid induced 16-like protein; This is the conserved N-terminal 450 residues of a ...
97-426 3.47e-116

Retinoic acid induced 16-like protein; This is the conserved N-terminal 450 residues of a family of proteins described as retinoic acid-induced protein 16-like proteins. The exact function is not known. The proteins are found from worms to humans.


Pssm-ID: 370927  Cd Length: 357  Bit Score: 355.48  E-value: 3.47e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564330205   97 LEFALREDLLSRVLTWQLQwdEFGDGVeerRAEQLKLFEMLVSEARQPLLRHGPVREALLALLDACGRPVPssPALDEGL 176
Cdd:pfam10257   2 LEYLLQHKILETLCTLGKA--DYPPGM---KQEVLKFYNKLLSHERQPLLHHINVHRPLQKLLRSCGEPVG--SDVEKEL 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564330205  177 VLLLSQLCVCVAREPSLLEFFLQP----------------PPEPGAAPRLLLFSRLVPFVHREGTLGQQARDALLLLMAL 240
Cdd:pfam10257  75 VQLLFGLCVKLRQDPSLLNFFFENksdqqraellvnpsveFAGATGKEDFNLFSLLLPLVHREGRLGVFAREGLLLLMSL 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564330205  241 SDGSPTVGRYIADHSYFCPVLATGLSALYSSLPRKIE---VPGDDW---HCLRREDWIGVP---ALALFMSSLEFCNAVI 311
Cdd:pfam10257 155 ASRSPTLATYLIESSDLCPLLATGLGALYSLLPTSLPaptISSIDWrldHSIAPEDLATFPgkrALDSFLSWLDFCNDLI 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564330205  312 QVAHPLVQKQLVDYIHNGFLVPVMGPALHKTSVEEMIASTAYLELFLRSISEPALLR-------TFLRFLLLHRHDTHTI 384
Cdd:pfam10257 235 QVAHSEVADALLDAIYEGFLVPVLYPSLLQTSEGSILAVTAYLDRILRSITSPALLQeflsfllGEEKSPETSDDDGHPL 314
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 564330205  385 LDTLVARIGSNS-RLCMVSLSLFRTLLNLSCEDVLLQLVLRYL 426
Cdd:pfam10257 315 RDTLIERCNHLSdELSIVTLRLFETLLQLPCEDILLDLVLRNL 357
DUF5917 pfam19314
Family of unknown function (DUF5917); This short presumed domain is found close to the ...
559-651 5.01e-39

Family of unknown function (DUF5917); This short presumed domain is found close to the C-terminus of FHIP proteins, FAM160B proteins and UPF0518 family proteins.


Pssm-ID: 466037  Cd Length: 94  Bit Score: 139.62  E-value: 5.01e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564330205  559 GPFMAVLFAKLENMLQNSVYVNFLLTGLVAQLACHPQPLLRSFLLNTNMVFQPSVKSLLQVLGSVKNKIESFAASQEDFP 638
Cdd:pfam19314   2 GPFLRMLFNKLENLLSQSYEVNLQLTGVISRLASYPQPLLHSYLLNPSLPLQPSVRSLYTVLSSLKEEIEERAASIPDFD 81
                          90
                  ....*....|...
gi 564330205  639 ALLSKAKKYLIAR 651
Cdd:pfam19314  82 ALLRRARKRLLGR 94
KELAA pfam19311
KELAA motif; This short motif is found at the C-terminus of FHIP proteins, FAM160B proteins ...
738-769 3.20e-08

KELAA motif; This short motif is found at the C-terminus of FHIP proteins, FAM160B proteins and UPF0518 family proteins. It has a conserved KELAA sequence for which it is named.


Pssm-ID: 466035  Cd Length: 32  Bit Score: 49.80  E-value: 3.20e-08
                          10        20        30
                  ....*....|....*....|....*....|..
gi 564330205  738 LRVKNAVYCAVIFPEFLKELAAISQAHAVTSP 769
Cdd:pfam19311   1 ERHKNLLEAAIVLEEFCKELAAIAFVKSHHSV 32
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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