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Conserved domains on  [gi|568976416|ref|XP_006534563|]
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protein IL-40 isoform X3 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Ig_C17orf99 pfam17736
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 25-116 7.20e-38

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


:

Pssm-ID: 465476  Cd Length: 95  Bit Score: 127.23  E-value: 7.20e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568976416   25 PVSQLqADFVLRHGDSGPTVELSCLASSGSPPITYRLVGNGGRVLAQQRPLHGKPANFSLPLSQTT----GWFQCEAEND 100
Cdd:pfam17736   1 PVSQI-AYKVLEVFPSGRRVLISCHASQGSPPITYSLVGSDGIVVAKKIPLHGEPANFSLNITLKSspdlLTYQCQAANT 79

                          90
                  ....*....|....*.
gi 568976416  101 VGVDSSARIPLPRGEL 116
Cdd:pfam17736  80 SGTQVSSLRLQPPWEL 95
 
Name Accession Description Interval E-value
Ig_C17orf99 pfam17736
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 25-116 7.20e-38

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


Pssm-ID: 465476  Cd Length: 95  Bit Score: 127.23  E-value: 7.20e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568976416   25 PVSQLqADFVLRHGDSGPTVELSCLASSGSPPITYRLVGNGGRVLAQQRPLHGKPANFSLPLSQTT----GWFQCEAEND 100
Cdd:pfam17736   1 PVSQI-AYKVLEVFPSGRRVLISCHASQGSPPITYSLVGSDGIVVAKKIPLHGEPANFSLNITLKSspdlLTYQCQAANT 79

                          90
                  ....*....|....*.
gi 568976416  101 VGVDSSARIPLPRGEL 116
Cdd:pfam17736  80 SGTQVSSLRLQPPWEL 95
IG_like smart00410
Immunoglobulin like; IG domains that cannot be classified into one of IGv1, IGc1, IGc2, IG.
 43-106 6.95e-04

Immunoglobulin like; IG domains that cannot be classified into one of IGv1, IGc1, IGc2, IG.


Pssm-ID: 214653 [Multi-domain]  Cd Length: 85  Bit Score: 37.48  E-value: 6.95e-04
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568976416    43 TVELSCLASsGSPPITYRLVGNGGRVLAQQR--PLHGKPANFSLPLSQTT----GWFQCEAENDVGVDSS 106
Cdd:smart00410  11 SVTLSCEAS-GSPPPEVTWYKQGGKLLAESGrfSVSRSGSTSTLTISNVTpedsGTYTCAATNSSGSASS 79
 
Name Accession Description Interval E-value
Ig_C17orf99 pfam17736
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 25-116 7.20e-38

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


Pssm-ID: 465476  Cd Length: 95  Bit Score: 127.23  E-value: 7.20e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568976416   25 PVSQLqADFVLRHGDSGPTVELSCLASSGSPPITYRLVGNGGRVLAQQRPLHGKPANFSLPLSQTT----GWFQCEAEND 100
Cdd:pfam17736   1 PVSQI-AYKVLEVFPSGRRVLISCHASQGSPPITYSLVGSDGIVVAKKIPLHGEPANFSLNITLKSspdlLTYQCQAANT 79

                          90
                  ....*....|....*.
gi 568976416  101 VGVDSSARIPLPRGEL 116
Cdd:pfam17736  80 SGTQVSSLRLQPPWEL 95
IG_like smart00410
Immunoglobulin like; IG domains that cannot be classified into one of IGv1, IGc1, IGc2, IG.
 43-106 6.95e-04

Immunoglobulin like; IG domains that cannot be classified into one of IGv1, IGc1, IGc2, IG.


Pssm-ID: 214653 [Multi-domain]  Cd Length: 85  Bit Score: 37.48  E-value: 6.95e-04
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568976416    43 TVELSCLASsGSPPITYRLVGNGGRVLAQQR--PLHGKPANFSLPLSQTT----GWFQCEAENDVGVDSS 106
Cdd:smart00410  11 SVTLSCEAS-GSPPPEVTWYKQGGKLLAESGrfSVSRSGSTSTLTISNVTpedsGTYTCAATNSSGSASS 79
Ig_3 pfam13927
Immunoglobulin domain; This family contains immunoglobulin-like domains.
 43-99 6.93e-03

Immunoglobulin domain; This family contains immunoglobulin-like domains.


Pssm-ID: 464046 [Multi-domain]  Cd Length: 78  Bit Score: 34.46  E-value: 6.93e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568976416   43 TVELSCLASSGSPPITYRLVGNGGRVLAQQRPLHGKPANFSLPLSQTT----GWFQCEAEN 99
Cdd:pfam13927  18 TVTLTCEATGSPPPTITWYKNGEPISSGSTRSRSLSGSNSTLTISNVTrsdaGTYTCVASN 78
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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