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Conserved domains on  [gi|755494031|ref|XP_011246268|]
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thrombospondin type-1 domain-containing protein 7B isoform X2 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
 337-398 1.27e-12

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


:

Pssm-ID: 465948  Cd Length: 52  Bit Score: 63.07  E-value: 1.27e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 755494031  337 CETSEWSPWSPCSKTCrsgtlSPGVRSRSRNVKHIAIGGGQECPELLEKETCiaegeFLQPC 398
Cdd:pfam19028   1 CVVSEWSEWSECSVTC-----GGGVQTRTRTVIVEPQNGGRPCPELLERRPC-----NLPPC 52
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
 180-229 1.39e-12

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


:

Pssm-ID: 465948  Cd Length: 52  Bit Score: 63.07  E-value: 1.39e-12
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 755494031  180 CVVSEFSPWSTCPEGCGKKLQHRTRVAIAPPLYGGLQCPNLTESRACEAP 229
Cdd:pfam19028   1 CVVSEWSEWSECSVTCGGGVQTRTRTVIVEPQNGGRPCPELLERRPCNLP 50
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
 602-660 3.88e-12

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


:

Pssm-ID: 465948  Cd Length: 52  Bit Score: 61.53  E-value: 3.88e-12
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 755494031  602 CVVSEWTVWSSCSQSCsnknSDGKQTRSRSILALAGEGGKTCPssqELQEYRLCNDHSC 660
Cdd:pfam19028   1 CVVSEWSEWSECSVTC----GGGVQTRTRTVIVEPQNGGRPCP---ELLERRPCNLPPC 52
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
 738-789 1.03e-10

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


:

Pssm-ID: 465948  Cd Length: 52  Bit Score: 57.67  E-value: 1.03e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 755494031  738 CLVTAFSEWTPCPRPCQPGnttiKQSRYRIIIQEAANGGQECPDTLfEEREC 789
Cdd:pfam19028   1 CVVSEWSEWSECSVTCGGG----VQTRTRTVIVEPQNGGRPCPELL-ERRPC 47
TSP1_ADAMTS super family cl40597
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 665-733 9.33e-06

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


The actual alignment was detected with superfamily member pfam19030:

Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 43.60  E-value: 9.33e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755494031  665 WETSAWGSCSentlvtalnvtigwngeATCGVGIQTRKVFCIKSHVGQVMT-KRCPESTRPETVRPCFLP 733
Cdd:pfam19030   1 WVAGPWGECS-----------------VTCGGGVQTRLVQCVQKGGGSIVPdSECSAQKKPPETQSCNLK 53
TSP1_ADAMTS super family cl40597
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 44-95 1.05e-04

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


The actual alignment was detected with superfamily member pfam19030:

Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 40.90  E-value: 1.05e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 755494031   44 WKTGPWGRCAGDCGpGGAQSRAVWCFH-IEGWTSPMSNCDESSQPPKERSCFR 95
Cdd:pfam19030   1 WVAGPWGECSVTCG-GGVQTRLVQCVQkGGGSIVPDSECSAQKKPPETQSCNL 52
TSP1_spondin super family cl46269
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
 485-542 1.26e-04

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


The actual alignment was detected with superfamily member pfam19028:

Pssm-ID: 480609  Cd Length: 52  Bit Score: 40.34  E-value: 1.26e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 755494031  485 CIVSSWSTWGPCvfenchDPQGKKGFRMRQRHVLMESTGPMGRCPHLAESVPCEDPMC 542
Cdd:pfam19028   1 CVVSEWSEWSEC------SVTCGGGVQTRTRTVIVEPQNGGRPCPELLERRPCNLPPC 52
TSP1_ADAMTS super family cl40597
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 137-175 4.73e-03

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


The actual alignment was detected with superfamily member pfam19030:

Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 35.89  E-value: 4.73e-03
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 755494031  137 GLQHRTVRCLQKLNRTMVSNEICEHfAPQPPTEQACLIP 175
Cdd:pfam19030  16 GVQTRLVQCVQKGGGSIVPDSECSA-QKKPPETQSCNLK 53
 
Name Accession Description Interval E-value
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
 337-398 1.27e-12

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 63.07  E-value: 1.27e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 755494031  337 CETSEWSPWSPCSKTCrsgtlSPGVRSRSRNVKHIAIGGGQECPELLEKETCiaegeFLQPC 398
Cdd:pfam19028   1 CVVSEWSEWSECSVTC-----GGGVQTRTRTVIVEPQNGGRPCPELLERRPC-----NLPPC 52
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
 180-229 1.39e-12

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 63.07  E-value: 1.39e-12
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 755494031  180 CVVSEFSPWSTCPEGCGKKLQHRTRVAIAPPLYGGLQCPNLTESRACEAP 229
Cdd:pfam19028   1 CVVSEWSEWSECSVTCGGGVQTRTRTVIVEPQNGGRPCPELLERRPCNLP 50
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
 602-660 3.88e-12

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 61.53  E-value: 3.88e-12
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 755494031  602 CVVSEWTVWSSCSQSCsnknSDGKQTRSRSILALAGEGGKTCPssqELQEYRLCNDHSC 660
Cdd:pfam19028   1 CVVSEWSEWSECSVTC----GGGVQTRTRTVIVEPQNGGRPCP---ELLERRPCNLPPC 52
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
 738-789 1.03e-10

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 57.67  E-value: 1.03e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 755494031  738 CLVTAFSEWTPCPRPCQPGnttiKQSRYRIIIQEAANGGQECPDTLfEEREC 789
Cdd:pfam19028   1 CVVSEWSEWSECSVTCGGG----VQTRTRTVIVEPQNGGRPCPELL-ERRPC 47
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 665-733 9.33e-06

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 43.60  E-value: 9.33e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755494031  665 WETSAWGSCSentlvtalnvtigwngeATCGVGIQTRKVFCIKSHVGQVMT-KRCPESTRPETVRPCFLP 733
Cdd:pfam19030   1 WVAGPWGECS-----------------VTCGGGVQTRLVQCVQKGGGSIVPdSECSAQKKPPETQSCNLK 53
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
 340-399 5.28e-05

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 41.42  E-value: 5.28e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 755494031   340 SEWSPWSPCSKTCRSgtlspGVRSRSRNVK-HIAIGGGQECPEL-LEKETCiaegeFLQPCP 399
Cdd:smart00209   2 SEWSEWSPCSVTCGG-----GVQTRTRSCCsPPPQNGGGPCTGEdVETRAC-----NEQPCP 53
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 44-95 1.05e-04

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 40.90  E-value: 1.05e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 755494031   44 WKTGPWGRCAGDCGpGGAQSRAVWCFH-IEGWTSPMSNCDESSQPPKERSCFR 95
Cdd:pfam19030   1 WVAGPWGECSVTCG-GGVQTRLVQCVQkGGGSIVPDSECSAQKKPPETQSCNL 52
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
 485-542 1.26e-04

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 40.34  E-value: 1.26e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 755494031  485 CIVSSWSTWGPCvfenchDPQGKKGFRMRQRHVLMESTGPMGRCPHLAESVPCEDPMC 542
Cdd:pfam19028   1 CVVSEWSEWSEC------SVTCGGGVQTRTRTVIVEPQNGGRPCPELLERRPCNLPPC 52
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
 604-660 3.56e-04

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 39.11  E-value: 3.56e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 755494031   604 VSEWTVWSSCSQSCSNknsdGKQTRSRS-ILALAGEGGKTCPSsqELQEYRLCNDHSC 660
Cdd:smart00209   1 WSEWSEWSPCSVTCGG----GVQTRTRScCSPPPQNGGGPCTG--EDVETRACNEQPC 52
PTZ00441 PTZ00441
sporozoite surface protein 2 (SSP2); Provisional
 342-399 1.01e-03

sporozoite surface protein 2 (SSP2); Provisional


Pssm-ID: 240420 [Multi-domain]  Cd Length: 576  Bit Score: 42.64  E-value: 1.01e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 755494031 342 WSPWSPCSKTCRSGTlspgvRSRSRNVKHiaIGGGQECPELLEKETCIAEGEFLqPCP 399
Cdd:PTZ00441 243 WDEWTPCSVTCGKGT-----HSRSRPILH--EGCTTHMVEECEEEECPVEPEPL-PVP 292
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
 182-233 1.04e-03

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 37.95  E-value: 1.04e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 755494031   182 VSEFSPWSTCPEGCGKKLQHRTRVAI-APPLYGGLQCP-NLTESRACEAPVsCP 233
Cdd:smart00209   1 WSEWSEWSPCSVTCGGGVQTRTRSCCsPPPQNGGGPCTgEDVETRACNEQP-CP 53
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 137-175 4.73e-03

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 35.89  E-value: 4.73e-03
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 755494031  137 GLQHRTVRCLQKLNRTMVSNEICEHfAPQPPTEQACLIP 175
Cdd:pfam19030  16 GVQTRLVQCVQKGGGSIVPDSECSA-QKKPPETQSCNLK 53
 
Name Accession Description Interval E-value
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
 337-398 1.27e-12

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 63.07  E-value: 1.27e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 755494031  337 CETSEWSPWSPCSKTCrsgtlSPGVRSRSRNVKHIAIGGGQECPELLEKETCiaegeFLQPC 398
Cdd:pfam19028   1 CVVSEWSEWSECSVTC-----GGGVQTRTRTVIVEPQNGGRPCPELLERRPC-----NLPPC 52
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
 180-229 1.39e-12

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 63.07  E-value: 1.39e-12
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 755494031  180 CVVSEFSPWSTCPEGCGKKLQHRTRVAIAPPLYGGLQCPNLTESRACEAP 229
Cdd:pfam19028   1 CVVSEWSEWSECSVTCGGGVQTRTRTVIVEPQNGGRPCPELLERRPCNLP 50
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
 602-660 3.88e-12

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 61.53  E-value: 3.88e-12
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 755494031  602 CVVSEWTVWSSCSQSCsnknSDGKQTRSRSILALAGEGGKTCPssqELQEYRLCNDHSC 660
Cdd:pfam19028   1 CVVSEWSEWSECSVTC----GGGVQTRTRTVIVEPQNGGRPCP---ELLERRPCNLPPC 52
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
 738-789 1.03e-10

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 57.67  E-value: 1.03e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 755494031  738 CLVTAFSEWTPCPRPCQPGnttiKQSRYRIIIQEAANGGQECPDTLfEEREC 789
Cdd:pfam19028   1 CVVSEWSEWSECSVTCGGG----VQTRTRTVIVEPQNGGRPCPELL-ERRPC 47
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 665-733 9.33e-06

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 43.60  E-value: 9.33e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755494031  665 WETSAWGSCSentlvtalnvtigwngeATCGVGIQTRKVFCIKSHVGQVMT-KRCPESTRPETVRPCFLP 733
Cdd:pfam19030   1 WVAGPWGECS-----------------VTCGGGVQTRLVQCVQKGGGSIVPdSECSAQKKPPETQSCNLK 53
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
 340-399 5.28e-05

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 41.42  E-value: 5.28e-05
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 755494031   340 SEWSPWSPCSKTCRSgtlspGVRSRSRNVK-HIAIGGGQECPEL-LEKETCiaegeFLQPCP 399
Cdd:smart00209   2 SEWSEWSPCSVTCGG-----GVQTRTRSCCsPPPQNGGGPCTGEdVETRAC-----NEQPCP 53
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 44-95 1.05e-04

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 40.90  E-value: 1.05e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 755494031   44 WKTGPWGRCAGDCGpGGAQSRAVWCFH-IEGWTSPMSNCDESSQPPKERSCFR 95
Cdd:pfam19030   1 WVAGPWGECSVTCG-GGVQTRLVQCVQkGGGSIVPDSECSAQKKPPETQSCNL 52
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
 485-542 1.26e-04

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 40.34  E-value: 1.26e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 755494031  485 CIVSSWSTWGPCvfenchDPQGKKGFRMRQRHVLMESTGPMGRCPHLAESVPCEDPMC 542
Cdd:pfam19028   1 CVVSEWSEWSEC------SVTCGGGVQTRTRTVIVEPQNGGRPCPELLERRPCNLPPC 52
TSP_1 pfam00090
Thrombospondin type 1 domain;
340-388 2.15e-04

Thrombospondin type 1 domain;


Pssm-ID: 459668 [Multi-domain]  Cd Length: 49  Bit Score: 39.71  E-value: 2.15e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 755494031  340 SEWSPWSPCSKTCrsgtlSPGVRSRSRNVKHIAIGGGQECPELLEKETC 388
Cdd:pfam00090   1 SPWSPWSPCSVTC-----GKGIQVRQRTCKSPFPGGEPCTGDDIETQAC 44
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
 604-660 3.56e-04

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 39.11  E-value: 3.56e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 755494031   604 VSEWTVWSSCSQSCSNknsdGKQTRSRS-ILALAGEGGKTCPSsqELQEYRLCNDHSC 660
Cdd:smart00209   1 WSEWSEWSPCSVTCGG----GVQTRTRScCSPPPQNGGGPCTG--EDVETRACNEQPC 52
PTZ00441 PTZ00441
sporozoite surface protein 2 (SSP2); Provisional
 342-399 1.01e-03

sporozoite surface protein 2 (SSP2); Provisional


Pssm-ID: 240420 [Multi-domain]  Cd Length: 576  Bit Score: 42.64  E-value: 1.01e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 755494031 342 WSPWSPCSKTCRSGTlspgvRSRSRNVKHiaIGGGQECPELLEKETCIAEGEFLqPCP 399
Cdd:PTZ00441 243 WDEWTPCSVTCGKGT-----HSRSRPILH--EGCTTHMVEECEEEECPVEPEPL-PVP 292
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
 182-233 1.04e-03

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 37.95  E-value: 1.04e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 755494031   182 VSEFSPWSTCPEGCGKKLQHRTRVAI-APPLYGGLQCP-NLTESRACEAPVsCP 233
Cdd:smart00209   1 WSEWSEWSPCSVTCGGGVQTRTRSCCsPPPQNGGGPCTgEDVETRACNEQP-CP 53
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
 137-175 4.73e-03

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 35.89  E-value: 4.73e-03
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 755494031  137 GLQHRTVRCLQKLNRTMVSNEICEHfAPQPPTEQACLIP 175
Cdd:pfam19030  16 GVQTRLVQCVQKGGGSIVPDSECSA-QKKPPETQSCNLK 53
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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