|
Name |
Accession |
Description |
Interval |
E-value |
| Taxilin |
pfam09728 |
Myosin-like coiled-coil protein; Taxilin contains an extraordinarily long coiled-coil domain ... |
1-302 |
4.03e-102 |
|
Myosin-like coiled-coil protein; Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed. It is a novel binding partner of several syntaxin family members and is possibly involved in Ca2+-dependent exocytosis in neuroendocrine cells. Gamma-taxilin, described as leucine zipper protein Factor Inhibiting ATF4-mediated Transcription (FIAT), localizes to the nucleus in osteoblasts and dimerizes with ATF4 to form inactive dimers, thus inhibiting ATF4-mediated transcription.
Pssm-ID: 462861 [Multi-domain] Cd Length: 302 Bit Score: 309.58 E-value: 4.03e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 1 MQNLNKLQTPEEKFDFLFKKYAELLDEHRTEQKKLKLLQKKQVQIQKEKDQLQGEHSRAILARSKLESLCRELQRHNKTL 80
Cdd:pfam09728 7 MQLLNKLDSPEEKLAALCKKYAELLEEMKRLQKDLKKLKKKQDQLQKEKDQLQSELSKAILAKSKLEKLCRELQKQNKKL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 81 KEEALQRAREEEEKRKEITSHFQSTLTDIQGQIEQQSERNMKLCQENTELAEKLKSIIDQYELREEHLDKIFKHRELQQK 160
Cdd:pfam09728 87 KEESKKLAKEEEEKRKELSEKFQSTLKDIQDKMEEKSEKNNKLREENEELREKLKSLIEQYELRELHFEKLLKTKELEVQ 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 161 LVDAKLEQAQemmkEAEERHKREKEYllNQAAEWKLQAKVLKEQETVLQAQLTLYSGRFEEFQSTLTKSNEVFATFKQEM 240
Cdd:pfam09728 167 LAEAKLQQAT----EEEEKKAQEKEV--AKARELKAQVQTLSETEKELREQLNLYVEKFEEFQDTLNKSNEVFTTFKKEM 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 767942059 241 DKTTKKMKKLEKDTATWKARFENCNKALLDMIEEKALRAKEYECFVMKIGRLENLCRALQEE 302
Cdd:pfam09728 241 EKMSKKIKKLEKENLTWKRKWEKSNKALLEMAEERQKLKEELEKLQKKLEKLENLCRALQAE 302
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
65-308 |
2.25e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 50.83 E-value: 2.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 65 KLESLCRELQRHNKTLKEEALQRAREEEEKRKEITSHFQS------TLTDIQGQIEQQSERNMKLCQENTELAEKLKSII 138
Cdd:TIGR02168 688 ELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQisalrkDLARLEAEVEQLEERIAQLSKELTELEAEIEELE 767
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 139 DQYELREEHLDKIFKHRELQQKLVDAKLEQAQ---EMMKEAEERHKREK----------EYLLNQAAEWKLQAKVLKEQE 205
Cdd:TIGR02168 768 ERLEEAEEELAEAEAEIEELEAQIEQLKEELKalrEALDELRAELTLLNeeaanlrerlESLERRIAATERRLEDLEEQI 847
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 206 TVLQAQLTLYSGRFEEFQSTLTKSNEVFATFKQEMDKTTKKMKKLEKDTATWKARFENCNKALLDMIEEKALRAKEYECF 285
Cdd:TIGR02168 848 EELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQL 927
|
250 260
....*....|....*....|...
gi 767942059 286 VMKIGRLENLCRALQEERNELHK 308
Cdd:TIGR02168 928 ELRLEGLEVRIDNLQERLSEEYS 950
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
371-535 |
3.94e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 49.49 E-value: 3.94e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 371 QSKETQPEIGSSQESADAALKEPEQPPLIPSRDSESPLPPLTPQAEAEGGSDAEPPSKASNSPAGLGAETQCEGLPVGAQ 450
Cdd:PRK12323 368 SGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGA 447
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 451 ADQASWKPEAEASGQAPQAPteASLQKMEADVPAPACAAEEHVAAMVP-ACEPSRQPPRAAAEELPVGASAGPQPRNVAD 529
Cdd:PRK12323 448 PAPAPAPAAAPAAAARPAAA--GPRPVAAAAAAAPARAAPAAAPAPADdDPPPWEELPPEFASPAPAQPDAAPAGWVAES 525
|
....*.
gi 767942059 530 TNLEGV 535
Cdd:PRK12323 526 IPDPAT 531
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
397-529 |
5.73e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.55 E-value: 5.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 397 PLIPSRDSESPLPPLTPQAEAEGGSDAEPPSKASNSPAGLGAETQCEGLPVGAQADQASWkPEAEASGQAPQAPTEASLQ 476
Cdd:PHA03247 2673 AAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQAS-PALPAAPAPPAVPAGPATP 2751
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 767942059 477 KMEADVPAPACAA--EEHVAAMVPACEPSRQPPRAAAEELPVGASAGPQPRNVAD 529
Cdd:PHA03247 2752 GGPARPARPPTTAgpPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPAD 2806
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
377-524 |
7.92e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 7.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 377 PEIGSSQESADAALKEPEQPPLIPSRDSESPLPPLTpqAEAEGGSDAEP----PSKASNSPAGLGAETQcEGLPVGAQAD 452
Cdd:PHA03247 2690 PTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGP--AAARQASPALPaapaPPAVPAGPATPGGPAR-PARPPTTAGP 2766
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 767942059 453 QASWKPEAEASGQAPQAPTEASLQKMEADVPAPACAAEEHVAAMVPACEPSRQPPRAAAEELPVGASAGPQP 524
Cdd:PHA03247 2767 PAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTA 2838
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
364-524 |
1.27e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.06 E-value: 1.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 364 HPESTPHQSKETQPEIGSSQESADAALKEPEQPPLIPSRDSESPLPPLTPqAEAEGGSDAEPPSKASNSPAGLGAETQCE 443
Cdd:PRK07764 600 PPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAA-PEHHPKHVAVPDASDGGDGWPAKAGGAAP 678
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 444 GLPVGAQADQASWKPEAEASGQ-APQAPTEASLQKMEADVPAPACAAEEhvAAMVPACEPSRQPPRAAAEELPVGASAGP 522
Cdd:PRK07764 679 AAPPPAPAPAAPAAPAGAAPAQpAPAPAATPPAGQADDPAAQPPQAAQG--ASAPSPAADDPVPLPPEPDDPPDPAGAPA 756
|
..
gi 767942059 523 QP 524
Cdd:PRK07764 757 QP 758
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
365-528 |
2.73e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.24 E-value: 2.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 365 PESTPHQSKETQPEIGSSQESADAALKEPEQP--------PLIPSRDSESPLPPLT--PQAEAEGGSDAEPPSKASNSPA 434
Cdd:PHA03247 2708 PEPAPHALVSATPLPPGPAAARQASPALPAAPappavpagPATPGGPARPARPPTTagPPAPAPPAAPAAGPPRRLTRPA 2787
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 435 GLGAETQCEGLP-------VGAQADQASWKPEAEASGQAPQAPTEASLQKMEADVPAPACAAEEHVAAMVPACEPSRQPP 507
Cdd:PHA03247 2788 VASLSESRESLPspwdpadPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPP 2867
|
170 180
....*....|....*....|.
gi 767942059 508 RAAAEELPvGASAGPQPRNVA 528
Cdd:PHA03247 2868 SRSPAAKP-AAPARPPVRRLA 2887
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
400-535 |
1.29e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.98 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 400 PSRDSESPLPPLTPQAEAEGGSDAEPPSKASNSPAGLGAETQCEGLPVGAQADQASWKPEAEASGQAPQAPTEAslqkme 479
Cdd:PRK07764 398 APSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPA------ 471
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 767942059 480 ADVPAPACAAEEHVAAMVPACEPsRQPPRAAAeelPVGASAGPQPRNVADTNLEGV 535
Cdd:PRK07764 472 AAPEPTAAPAPAPPAAPAPAAAP-AAPAAPAA---PAGADDAATLRERWPEILAAV 523
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
46-317 |
3.29e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 43.51 E-value: 3.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 46 QKEKDQLQGEHSRAILARskLESLCRELQRHNKTLKEEAlQRAREEEEKRKEITS-HFQSTLTDIQGQIEQQSERNMKLC 124
Cdd:TIGR02168 173 RRKETERKLERTRENLDR--LEDILNELERQLKSLERQA-EKAERYKELKAELRElELALLVLRLEELREELEELQEELK 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 125 QENTELaEKLKSIIDQYElrEEHLDKIFKHRELQQKLVDA------------KLEQAQEMMKEAEERHKREKEYLLNQAA 192
Cdd:TIGR02168 250 EAEEEL-EELTAELQELE--EKLEELRLEVSELEEEIEELqkelyalaneisRLEQQKQILRERLANLERQLEELEAQLE 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 193 EWKLQAKVLKEQETVLQAQLTLYSGRFEEFQSTLTKSNEVFATFKQEMDkttkkmkklekdtaTWKARFENCNKALLDMI 272
Cdd:TIGR02168 327 ELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLE--------------ELEEQLETLRSKVAQLE 392
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 767942059 273 EEKALRAKEYECFVMKIGRLENLCRALQEERNELHKKIRDAEISE 317
Cdd:TIGR02168 393 LQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKE 437
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
377-525 |
4.74e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.91 E-value: 4.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 377 PEIGSSQESADAALKEPEQPPLipsrdSESPLPPLTPQAEAEGGSDAEPPSKASNSPAGLGAETQCEGL-PVGAQADQAS 455
Cdd:PRK07003 381 PAPGARAAAAVGASAVPAVTAV-----TGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADgDAPVPAKANA 455
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 767942059 456 WKPEAEASGQAPQAPTEASLQKMEADVPAPACAAEE------HVAAMVPACEPSRQPPRAAAEELPVGASAGPQPR 525
Cdd:PRK07003 456 RASADSRCDERDAQPPADSGSASAPASDAPPDAAFEpapraaAPSAATPAAVPDARAPAAASREDAPAAAAPPAPE 531
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
383-520 |
6.92e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.53 E-value: 6.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 383 QESADAALKEPEQPPLIPSRDSESPLPPLTPQAEAEGGSDAEPPSKASNSPAGLGAETQCEGLPVGAQADQASWKPEAEA 462
Cdd:PRK07003 413 KAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEP 492
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 767942059 463 SGQAPQAPTEASLQKMEADVPAPACAAEEHVAAMVPACEPSRQPPRAAAEELPVGASA 520
Cdd:PRK07003 493 APRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAA 550
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
387-536 |
7.79e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 7.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 387 DAALKEPEQPPLIPSRDSESPLPPLTPQAEAEGGSDAEPPSKASNSPAGLGAETQCEGLPVGAQADQASWKPEAEASGQA 466
Cdd:PRK07764 591 APGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWP 670
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 467 PQAPTEASlqkmEADVPAPACAAEEHVAAMVPACEPSRQPPRAAAEElpvGASAGPQPRNVADTNLEGVD 536
Cdd:PRK07764 671 AKAGGAAP----AAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQ---ADDPAAQPPQAAQGASAPSP 733
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
340-525 |
8.94e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.08 E-value: 8.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 340 IDAEEVNSVQTAVKNLATAFMIIHHPESTPhqsketQPEIGSSQESADAALKEPEQPPLIPSRDsESPLPPlTPQAEAEG 419
Cdd:PHA03307 46 DSAELAAVTVVAGAAACDRFEPPTGPPPGP------GTEAPANESRSTPTWSLSTLAPASPARE-GSPTPP-GPSSPDPP 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 420 GSDAEPPSKASNSPAGLGAETQCEGLPVGAQADQASWKPEAEASGQAPQA-PTEAS--LQKMEADVPAPACAAEEhvaaM 496
Cdd:PHA03307 118 PPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAAsSRQAAlpLSSPEETARAPSSPPAE----P 193
|
170 180 190
....*....|....*....|....*....|
gi 767942059 497 VPACEPSRQPPRAAAEELPVGASAG-PQPR 525
Cdd:PHA03307 194 PPSTPPAAASPRPPRRSSPISASASsPAPA 223
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
386-522 |
1.05e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 41.76 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 386 ADAALKEPEQPPLIPSRDSESPLPPLTPQAEAEGGSDAEPPSkASNSPAGLGAETQCEGLPVGAQADQASWKPEAEASGQ 465
Cdd:PRK07003 402 VTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAA-DGDAPVPAKANARASADSRCDERDAQPPADSGSASAP 480
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 767942059 466 APQAPTEASLQKMEADVPAPACAAEEHVAAMVPACEPSRQPPRAAAEELPVGASAGP 522
Cdd:PRK07003 481 ASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTP 537
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
365-507 |
1.67e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 41.37 E-value: 1.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 365 PESTPHQSKETQPEIGSSQESADAALKEPEQPPLIPSRDSESPLPPLTPQAEAEGGSDAEPPSKASNSPAGLGAeTQCEG 444
Cdd:PRK07003 482 SDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAAAALDV-LRNAG 560
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 767942059 445 LPVGA---QADQASWKPEAEASGQAPQAPTEASLQKMEADVPAPACAAEEHVAAMVPACEPSRQPP 507
Cdd:PRK07003 561 MRVSSdrgARAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAP 626
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
387-530 |
1.74e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.46 E-value: 1.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 387 DAALKEPEQPPL---------IPSRDSESPLPPLTPQAEAEGGSDAEPPSKASNSPAG--LGAETQCEGLPVGAQADQAS 455
Cdd:PHA03247 2522 DEPVGEPVHPRMltwirgleeLASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEpaVTSRARRPDAPPQSARPRAP 2601
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 456 WKPEAEASGQAPQAPTEASLQKMEADVPAPACAAEE----HVAAMVPACEPSRQPP--------RAAAEELPVGASA--- 520
Cdd:PHA03247 2602 VDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEpdphPPPTVPPPERPRDDPApgrvsrprRARRLGRAAQASSppq 2681
|
170
....*....|
gi 767942059 521 GPQPRNVADT 530
Cdd:PHA03247 2682 RPRRRAARPT 2691
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
5-223 |
2.20e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 40.81 E-value: 2.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 5 NKLQTPEEKFDFLFKKYAELLDEHRTEQKKLKLLQKKQVQIQKEKDQLQGEHSRAILARSKLESLCRELQRHNKTLKEEA 84
Cdd:TIGR02168 740 AEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEA 819
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 85 LQRAREEEEKRKEITShFQSTLTDIQGQIEQQSER------NMKLCQEN-TELAEKLKSIIDQYELREEHLDKIFKHREL 157
Cdd:TIGR02168 820 ANLRERLESLERRIAA-TERRLEDLEEQIEELSEDieslaaEIEELEELiEELESELEALLNERASLEEALALLRSELEE 898
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 158 QQKLVDAKLEQAQEMMKEAEE-RHKREKEYLLNQAAEWK---LQAKVLKEQETVLQAQLTLYSGRFEEFQ 223
Cdd:TIGR02168 899 LSEELRELESKRSELRRELEElREKLAQLELRLEGLEVRidnLQERLSEEYSLTLEEAEALENKIEDDEE 968
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
367-528 |
2.55e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 40.60 E-value: 2.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 367 STPHQSKETQPEIGSSQESADAALKEPEQPPLIPsrDSESPLPPLTPQAEAEGGSDAEPPSKASNSPAGlGAETQCEGLP 446
Cdd:PRK07003 430 PAPPATADRGDDAADGDAPVPAKANARASADSRC--DERDAQPPADSGSASAPASDAPPDAAFEPAPRA-AAPSAATPAA 506
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 447 VGAQADQASWKPEAEASGQAPQAPTEASLQKMEADVPAPACAAEEHV-----AAMVPACEPSRQPPRAAAEELPVGASAG 521
Cdd:PRK07003 507 VPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAAAALdvlrnAGMRVSSDRGARAAAAAKPAAAPAAAPK 586
|
....*..
gi 767942059 522 PQPRNVA 528
Cdd:PRK07003 587 PAAPRVA 593
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
365-529 |
4.09e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.15 E-value: 4.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 365 PESTPHQSKETQPEIGSSQESADAALKEPEQPPLIPSRDSESPLPPLTPQAEAEGGSD---AEPPSKASNSPAGLGAetq 441
Cdd:PHA03307 141 VGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPpaaASPRPPRRSSPISASA--- 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 442 ceGLPVGAQADQASWKPEAEASGQAP-------QAPTEASLQKMEADVPAPACAAeEHVAAMVPACEPSRQPPRAAAEEL 514
Cdd:PHA03307 218 --SSPAPAPGRSAADDAGASSSDSSSsessgcgWGPENECPLPRPAPITLPTRIW-EASGWNGPSSRPGPASSSSSPRER 294
|
170 180
....*....|....*....|...
gi 767942059 515 --------PVGASAGPQPRNVAD 529
Cdd:PHA03307 295 spspspssPGSGPAPSSPRASSS 317
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
385-531 |
4.34e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 39.83 E-value: 4.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 385 SADAALKEPEQPPLIPS---RDSESPLPPLTPQAEAEGGSDAEPPSKASNSPAglgAETQCEGLPVGAQADQASWKPEAE 461
Cdd:PRK07003 366 GAPGGGVPARVAGAVPApgaRAAAAVGASAVPAVTAVTGAAGAALAPKAAAAA---AATRAEAPPAAPAPPATADRGDDA 442
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 462 ASGQAPQAPTEASlqKMEADVPAPACAAEEHVAAMVPACEPSRQPPRAAAEELPVGASAGPQPRNVADTN 531
Cdd:PRK07003 443 ADGDAPVPAKANA--RASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDA 510
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
330-508 |
4.53e-03 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 40.02 E-value: 4.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 330 PESNVSVDQEIDAEEVNSVQTAVKNLATAfmiihhpestphqsketQPEIGSSQESADAALKEPEQPPLIPSRDSESPLP 409
Cdd:PRK10811 849 RPQDVQVEEQREAEEVQVQPVVAEVPVAA-----------------AVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVV 911
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 410 PLTPQAEAEGGSDAEPPSKASNSPAGLGAETQCEGLPVGAQADQASWKPEAEASG-QAPQAPTEASLQKMEADVPAPACA 488
Cdd:PRK10811 912 VETTHPEVIAAPVTEQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAeVVVAEPEVVAQPAAPVVAEVAAEV 991
|
170 180
....*....|....*....|
gi 767942059 489 AEEHVAAMVPACEPSRQPPR 508
Cdd:PRK10811 992 ETVTAVEPEVAPAQVPEATV 1011
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
413-524 |
5.40e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 39.70 E-value: 5.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 413 PQAEAEGGSDAE-----PPSKASNSPAGLgAETQCEGLPVGAQADQASWKPEAEASGQAPQAPTEASLQKMEADVPAPAC 487
Cdd:PRK14951 366 PAAAAEAAAPAEkktpaRPEAAAPAAAPV-AQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444
|
90 100 110
....*....|....*....|....*....|....*..
gi 767942059 488 AAEEHVAAMVPACEPSRQPPRAAAEelPVGASAGPQP 524
Cdd:PRK14951 445 VALAPAPPAQAAPETVAIPVRVAPE--PAVASAAPAP 479
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
413-524 |
6.27e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 39.58 E-value: 6.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 413 PQAEAEGGSDAEPPSkasnSPAGLGAETQCEGLPVGAQADQASWKPEAEASGQAPQAPTEASLQKMEADVPAPAC----- 487
Cdd:PRK07764 394 PAAAAPSAAAAAPAA----APAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAqpapa 469
|
90 100 110
....*....|....*....|....*....|....*....
gi 767942059 488 --AAEEHVAAMVPACEPSRQPPRAAAEELPVGASAGPQP 524
Cdd:PRK07764 470 paAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADD 508
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
367-524 |
6.67e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 39.54 E-value: 6.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767942059 367 STPHQSKETQPEIGSSQESADAALKEPEQPPLIPSRdsesPLPPLTPQAEAEGGSDAEPPSKASNSPAGLGAEtqceglP 446
Cdd:PHA03247 392 ATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPASA----PPPPATPLPSAEPGSDDGPAPPPERQPPAPATE------P 461
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767942059 447 VGAQADQASWKP-EAEASGQAPQAPTEASLQKMEADvpaPACAAeehVAAMVPACEPSRQPPRAAAEELPVGASAGPQP 524
Cdd:PHA03247 462 APDDPDDATRKAlDALRERRPPEPPGADLAELLGRH---PDTAG---TVVRLAAREAAIAREVAECSRLTINALRSPFP 534
|
|
| |
