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Conserved domains on  [gi|1023183628|ref|XP_016291879|]
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Pleckstrin [Kalmanozyma brasiliensis GHG001]

Protein Classification

SLM1 family PH domain-containing protein( domain architecture ID 20802825)

SLM1 family PH (pleckstrin homology) domain-containing protein, such as yeast phosphatidylinositol 4,5-bisphosphate-binding proteins SLM1 and SLM2, which are effectors of the TORC2- and calcineurin-signaling pathways and bind phosphatidylinositol 4,5-bisphosphate through their PH domains

CATH:  2.30.29.30
Gene Ontology:  GO:0008289|GO:0005515
SCOP:  3000134

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
BAR_4 pfam20400
BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.
97-278 1.02e-84

BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.


:

Pssm-ID: 466549  Cd Length: 192  Bit Score: 261.36  E-value: 1.02e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023183628  97 GIQDIYYGIRDKTRVIADHHANLAKTVEGSIVQHLQKLRSEIKAHIKNVQQDTGKLANSVAKEREMSTKQITELARSITL 176
Cdd:pfam20400   3 GIQDVQVILRDYHRQIADQHAKLAREIESSIIPALEGLRKDLKQKIKEIKNLSGDFKNSVDKERELTRKLLQKLIASVKL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023183628 177 LKNT-------PMSVTAREDPYAANQGVFRQLQRQVNEENALQKSIIIMQQNSAHFEEGIVRSIQSAWQTFDEW-SGRMS 248
Cdd:pfam20400  83 LDNAlgsvdkdPSALTGKNDPYLLNLAVDRQLKRQIDEENYLHKAYLNLQSSGREFEKIIVGEIQKALQTYAELlKREAD 162
                         170       180       190
                  ....*....|....*....|....*....|
gi 1023183628 249 SQVQDTWLSLGVQMRSLQPNSEWIAFAARS 278
Cdd:pfam20400 163 LAIQNLVEELRQGPISLPPDFEWNSFVARN 192
PH_Slm1 cd13311
Slm1 Pleckstrin homology (PH) domain; Slm1 is a component of the target of rapamycin complex 2 ...
304-425 2.54e-58

Slm1 Pleckstrin homology (PH) domain; Slm1 is a component of the target of rapamycin complex 2 (TORC2) signaling pathway. It plays a role in the regulation of actin organization and is a target of sphingolipid signaling during the heat shock response. Slm1 contains a single PH domain that binds PtdIns(4,5)P2, PtdIns(4)P, and dihydrosphingosine 1-phosphate (DHS-1P). Slm1 possesses two binding sites for anionic lipids. The non-canonical binding site of the PH domain of Slm1 is used for ligand binding, and it is proposed that beta-spectrin, Tiam1 and ArhGAP9 also have this type of phosphoinositide binding site. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


:

Pssm-ID: 270121  Cd Length: 110  Bit Score: 189.86  E-value: 2.54e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023183628 304 VIPVHQGILERKKRFTKTYKESFYVLTPAGYLHEHGSSDPTKHPQPELSLFLPECTLGPPSTMAAKSHKFHIEGRKVTGN 383
Cdd:cd13311     1 TKPLISGILERKSKFLKSYSKGYYVLTPAGYLHEFKSSDRKKDPAPEMSLYLPECKIGAPSNKGSKSHKFILKGKDVGSG 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1023183628 384 QsavaskglaslgMGREHAYTFRARSHDEMMEWWNDIKQLSK 425
Cdd:cd13311    81 K------------FHRGHEWVFKAESHEEMMAWWEDIKELTK 110
 
Name Accession Description Interval E-value
BAR_4 pfam20400
BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.
97-278 1.02e-84

BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.


Pssm-ID: 466549  Cd Length: 192  Bit Score: 261.36  E-value: 1.02e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023183628  97 GIQDIYYGIRDKTRVIADHHANLAKTVEGSIVQHLQKLRSEIKAHIKNVQQDTGKLANSVAKEREMSTKQITELARSITL 176
Cdd:pfam20400   3 GIQDVQVILRDYHRQIADQHAKLAREIESSIIPALEGLRKDLKQKIKEIKNLSGDFKNSVDKERELTRKLLQKLIASVKL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023183628 177 LKNT-------PMSVTAREDPYAANQGVFRQLQRQVNEENALQKSIIIMQQNSAHFEEGIVRSIQSAWQTFDEW-SGRMS 248
Cdd:pfam20400  83 LDNAlgsvdkdPSALTGKNDPYLLNLAVDRQLKRQIDEENYLHKAYLNLQSSGREFEKIIVGEIQKALQTYAELlKREAD 162
                         170       180       190
                  ....*....|....*....|....*....|
gi 1023183628 249 SQVQDTWLSLGVQMRSLQPNSEWIAFAARS 278
Cdd:pfam20400 163 LAIQNLVEELRQGPISLPPDFEWNSFVARN 192
PH_Slm1 cd13311
Slm1 Pleckstrin homology (PH) domain; Slm1 is a component of the target of rapamycin complex 2 ...
304-425 2.54e-58

Slm1 Pleckstrin homology (PH) domain; Slm1 is a component of the target of rapamycin complex 2 (TORC2) signaling pathway. It plays a role in the regulation of actin organization and is a target of sphingolipid signaling during the heat shock response. Slm1 contains a single PH domain that binds PtdIns(4,5)P2, PtdIns(4)P, and dihydrosphingosine 1-phosphate (DHS-1P). Slm1 possesses two binding sites for anionic lipids. The non-canonical binding site of the PH domain of Slm1 is used for ligand binding, and it is proposed that beta-spectrin, Tiam1 and ArhGAP9 also have this type of phosphoinositide binding site. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270121  Cd Length: 110  Bit Score: 189.86  E-value: 2.54e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023183628 304 VIPVHQGILERKKRFTKTYKESFYVLTPAGYLHEHGSSDPTKHPQPELSLFLPECTLGPPSTMAAKSHKFHIEGRKVTGN 383
Cdd:cd13311     1 TKPLISGILERKSKFLKSYSKGYYVLTPAGYLHEFKSSDRKKDPAPEMSLYLPECKIGAPSNKGSKSHKFILKGKDVGSG 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1023183628 384 QsavaskglaslgMGREHAYTFRARSHDEMMEWWNDIKQLSK 425
Cdd:cd13311    81 K------------FHRGHEWVFKAESHEEMMAWWEDIKELTK 110
PH_20 pfam20399
PH domain; This entry represents a PH domain found in a variety of fungal proteins.
296-378 3.94e-45

PH domain; This entry represents a PH domain found in a variety of fungal proteins.


Pssm-ID: 466548  Cd Length: 84  Bit Score: 153.87  E-value: 3.94e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023183628 296 YPGKDDPSVIPVHQGILERKKRFTKTYKESFYVLTPAGYLHEHGSSDPTKHPQ-PELSLFLPECTLGPPSTMAAKSHKFH 374
Cdd:pfam20399   1 YPGKDSPLVKPIRAGYLERKSKYLKSYTEGYYVLTPAGFLHEFKSSDPFKTGQaPVFSLYLPECTLGPPSDPGSSSHKFH 80

                  ....
gi 1023183628 375 IEGR 378
Cdd:pfam20399  81 LKGK 84
PH smart00233
Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The ...
306-425 4.05e-07

Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.


Pssm-ID: 214574 [Multi-domain]  Cd Length: 102  Bit Score: 48.31  E-value: 4.05e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023183628  306 PVHQGILERK-KRFTKTYKESFYVLTPaGYLHEHGSSDPTKHPQPELSLFLPECTLGPPSTMAAKSHKFHIEgrkvtgnq 384
Cdd:smart00233   1 VIKEGWLYKKsGGGKKSWKKRYFVLFN-STLLYYKSKKDKKSYKPKGSIDLSGCTVREAPDPDSSKKPHCFE-------- 71
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 1023183628  385 savaskglasLGMGREHAYTFRARSHDEMMEWWNDIKQLSK 425
Cdd:smart00233  72 ----------IKTSDRKTLLLQAESEEEREKWVEALRKAIA 102
 
Name Accession Description Interval E-value
BAR_4 pfam20400
BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.
97-278 1.02e-84

BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.


Pssm-ID: 466549  Cd Length: 192  Bit Score: 261.36  E-value: 1.02e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023183628  97 GIQDIYYGIRDKTRVIADHHANLAKTVEGSIVQHLQKLRSEIKAHIKNVQQDTGKLANSVAKEREMSTKQITELARSITL 176
Cdd:pfam20400   3 GIQDVQVILRDYHRQIADQHAKLAREIESSIIPALEGLRKDLKQKIKEIKNLSGDFKNSVDKERELTRKLLQKLIASVKL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023183628 177 LKNT-------PMSVTAREDPYAANQGVFRQLQRQVNEENALQKSIIIMQQNSAHFEEGIVRSIQSAWQTFDEW-SGRMS 248
Cdd:pfam20400  83 LDNAlgsvdkdPSALTGKNDPYLLNLAVDRQLKRQIDEENYLHKAYLNLQSSGREFEKIIVGEIQKALQTYAELlKREAD 162
                         170       180       190
                  ....*....|....*....|....*....|
gi 1023183628 249 SQVQDTWLSLGVQMRSLQPNSEWIAFAARS 278
Cdd:pfam20400 163 LAIQNLVEELRQGPISLPPDFEWNSFVARN 192
PH_Slm1 cd13311
Slm1 Pleckstrin homology (PH) domain; Slm1 is a component of the target of rapamycin complex 2 ...
304-425 2.54e-58

Slm1 Pleckstrin homology (PH) domain; Slm1 is a component of the target of rapamycin complex 2 (TORC2) signaling pathway. It plays a role in the regulation of actin organization and is a target of sphingolipid signaling during the heat shock response. Slm1 contains a single PH domain that binds PtdIns(4,5)P2, PtdIns(4)P, and dihydrosphingosine 1-phosphate (DHS-1P). Slm1 possesses two binding sites for anionic lipids. The non-canonical binding site of the PH domain of Slm1 is used for ligand binding, and it is proposed that beta-spectrin, Tiam1 and ArhGAP9 also have this type of phosphoinositide binding site. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270121  Cd Length: 110  Bit Score: 189.86  E-value: 2.54e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023183628 304 VIPVHQGILERKKRFTKTYKESFYVLTPAGYLHEHGSSDPTKHPQPELSLFLPECTLGPPSTMAAKSHKFHIEGRKVTGN 383
Cdd:cd13311     1 TKPLISGILERKSKFLKSYSKGYYVLTPAGYLHEFKSSDRKKDPAPEMSLYLPECKIGAPSNKGSKSHKFILKGKDVGSG 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1023183628 384 QsavaskglaslgMGREHAYTFRARSHDEMMEWWNDIKQLSK 425
Cdd:cd13311    81 K------------FHRGHEWVFKAESHEEMMAWWEDIKELTK 110
PH_20 pfam20399
PH domain; This entry represents a PH domain found in a variety of fungal proteins.
296-378 3.94e-45

PH domain; This entry represents a PH domain found in a variety of fungal proteins.


Pssm-ID: 466548  Cd Length: 84  Bit Score: 153.87  E-value: 3.94e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023183628 296 YPGKDDPSVIPVHQGILERKKRFTKTYKESFYVLTPAGYLHEHGSSDPTKHPQ-PELSLFLPECTLGPPSTMAAKSHKFH 374
Cdd:pfam20399   1 YPGKDSPLVKPIRAGYLERKSKYLKSYTEGYYVLTPAGFLHEFKSSDPFKTGQaPVFSLYLPECTLGPPSDPGSSSHKFH 80

                  ....
gi 1023183628 375 IEGR 378
Cdd:pfam20399  81 LKGK 84
PH smart00233
Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The ...
306-425 4.05e-07

Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.


Pssm-ID: 214574 [Multi-domain]  Cd Length: 102  Bit Score: 48.31  E-value: 4.05e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023183628  306 PVHQGILERK-KRFTKTYKESFYVLTPaGYLHEHGSSDPTKHPQPELSLFLPECTLGPPSTMAAKSHKFHIEgrkvtgnq 384
Cdd:smart00233   1 VIKEGWLYKKsGGGKKSWKKRYFVLFN-STLLYYKSKKDKKSYKPKGSIDLSGCTVREAPDPDSSKKPHCFE-------- 71
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 1023183628  385 savaskglasLGMGREHAYTFRARSHDEMMEWWNDIKQLSK 425
Cdd:smart00233  72 ----------IKTSDRKTLLLQAESEEEREKWVEALRKAIA 102
PH pfam00169
PH domain; PH stands for pleckstrin homology.
306-425 9.13e-06

PH domain; PH stands for pleckstrin homology.


Pssm-ID: 459697 [Multi-domain]  Cd Length: 105  Bit Score: 44.86  E-value: 9.13e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023183628 306 PVHQGILERK-KRFTKTYKESFYVLTPaGYLHEHGSSDPTKHPQPELSLFLPECTLG--PPSTMAAKSHKFHIEGRKVTG 382
Cdd:pfam00169   1 VVKEGWLLKKgGGKKKSWKKRYFVLFD-GSLLYYKDDKSGKSKEPKGSISLSGCEVVevVASDSPKRKFCFELRTGERTG 79
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1023183628 383 NQSavaskglaslgmgrehaYTFRARSHDEMMEWWNDIKQLSK 425
Cdd:pfam00169  80 KRT-----------------YLLQAESEEERKDWIKAIQSAIR 105
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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