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Conserved domains on  [gi|1039774591|ref|XP_017176960|]
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amiloride-sensitive sodium channel subunit alpha isoform X1 [Mus musculus]

Protein Classification

epithelial sodium channel family protein( domain architecture ID 10017482)

epithelial sodium channel (ENaC) family protein acts as sodium channel transporter; similar to Homo sapiens acid-sensing ion channel 1 and amiloride-sensitive sodium channel subunits alpha/beta/gamma/delta

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ENaC TIGR00859
sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC ...
25-539 0e+00

sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of sodium channels from animals and has no recognizable homologues in other eukaryotes or bacteria. The vertebrate ENaC proteins from epithelial cells cluster tightly together on the phylogenetic tree: voltage-insensitive ENaC homologues are also found in the brain. Eleven sequenced C. elegans proteins, including the degenerins, are distantly related to the vertebrate proteins as well as to each other. At least some ofthese proteins form part of a mechano-transducing complex for touch sensitivity. Other members of the ENaC family, the acid-sensing ion channels, ASIC1-3,are homo- or hetero-oligomeric neuronal H+-gated channels that mediate pain sensation in response to tissue acidosis. The homologous Helix aspersa(FMRF-amide)-activated Na+ channel is the first peptide neurotransmitter-gated ionotropic receptor to be sequenced.Mammalian ENaC is important for the maintenance of Na+ balance and the regulation of blood pressure. Three homologous ENaC subunits, a, b and g, havebeen shown to assemble to form the highly Na+-selective channel.This model is designed from the vertebrate members of the ENaC family. [Transport and binding proteins, Cations and iron carrying compounds]


:

Pssm-ID: 273304 [Multi-domain]  Cd Length: 595  Bit Score: 795.09  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591  25 PVRYTEIKEDLEELDRITEQTLFDLYKYNSSYTRQAGGRRRStRDLRGALPHPLQRLRTPPPPNpARSARSASSSVRDNN 104
Cdd:TIGR00859  84 PYRYSKVKHLLEELDLETAQTLLSLYGYNSSLARSARSNNRN-RIPLVVLDETLPRHPVPRDLF-TRQVHNKLISNRSNS 161
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 105 PQVDRKDWKIGFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPDTSPALEEEALGSFIFTCRFNQAPCNQANY 184
Cdd:TIGR00859 162 PQVNASDWKVGFKLCNNNGSDCFYRTYTSGVQAVREWYRFHYINIFAQVPAEDKDRMGYQLEDFILTCRFDGESCDARNF 241
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 185 SQFHHPMYGNCYTFNNKNNSNLWMSSMPGVNNGLSLTLRTEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNVRPGVE 264
Cdd:TIGR00859 242 THFHHPMYGNCYTFNSGENSNLLTSSMPGAENGLKLVLDIEQDEYLPLLSTEAGARVMVHSQDEPPFIDDLGFGVRPGTE 321
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 265 TSISMRKEALDSLGGNYGDCTENGSDVPVKNLYPSKYTQQVCIHSCFQENMIKKCGCAYIFYPKPKGVEFCDYLKQSSWG 344
Cdd:TIGR00859 322 TSISMQEDELQRLGGPYGDCTENGSDVPVENLYNSSYSIQACLRSCFQRYMVENCGCAYYHYPLPGGAEYCNYEQHPDWA 401
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 345 YCYYKLQAAFSLDSLGCFSKCRKPCSVTNYKLSAGYSRWPSVKSQDWIFEMLSLQNNYTINNKRNGVAKLNIFFKELNYK 424
Cdd:TIGR00859 402 YCYYKLYAEFDQEELGCFSVCREPCNFTEYKLTLSMARWPSAASEDWLLHVLSRQNEYNITLIRNGIAKLNIFFEELNYR 481
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 425 TNSESPSVTMVSLLSNLGSQWSLWFGSSVLSVVEMAELIFDLLVITLIMLLHRFRsRYWSPGRGARGAREVASTPASSFP 504
Cdd:TIGR00859 482 TIEESPAYNVVTLLSNLGGQMGLWMGASVLCVLELLELIIDLIFITLLRLLWRFR-KWWQRRRGPPYAEPPEPVSADTPP 560
                         490       500       510
                  ....*....|....*....|....*....|....*
gi 1039774591 505 SRFCPHPTSPPPSLPQQGTTPPLALTAPPPAYATL 539
Cdd:TIGR00859 561 SLQLDDPPTFPSALPLPHASGLSLPGTPPPNYNTL 595
 
Name Accession Description Interval E-value
ENaC TIGR00859
sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC ...
25-539 0e+00

sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of sodium channels from animals and has no recognizable homologues in other eukaryotes or bacteria. The vertebrate ENaC proteins from epithelial cells cluster tightly together on the phylogenetic tree: voltage-insensitive ENaC homologues are also found in the brain. Eleven sequenced C. elegans proteins, including the degenerins, are distantly related to the vertebrate proteins as well as to each other. At least some ofthese proteins form part of a mechano-transducing complex for touch sensitivity. Other members of the ENaC family, the acid-sensing ion channels, ASIC1-3,are homo- or hetero-oligomeric neuronal H+-gated channels that mediate pain sensation in response to tissue acidosis. The homologous Helix aspersa(FMRF-amide)-activated Na+ channel is the first peptide neurotransmitter-gated ionotropic receptor to be sequenced.Mammalian ENaC is important for the maintenance of Na+ balance and the regulation of blood pressure. Three homologous ENaC subunits, a, b and g, havebeen shown to assemble to form the highly Na+-selective channel.This model is designed from the vertebrate members of the ENaC family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273304 [Multi-domain]  Cd Length: 595  Bit Score: 795.09  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591  25 PVRYTEIKEDLEELDRITEQTLFDLYKYNSSYTRQAGGRRRStRDLRGALPHPLQRLRTPPPPNpARSARSASSSVRDNN 104
Cdd:TIGR00859  84 PYRYSKVKHLLEELDLETAQTLLSLYGYNSSLARSARSNNRN-RIPLVVLDETLPRHPVPRDLF-TRQVHNKLISNRSNS 161
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 105 PQVDRKDWKIGFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPDTSPALEEEALGSFIFTCRFNQAPCNQANY 184
Cdd:TIGR00859 162 PQVNASDWKVGFKLCNNNGSDCFYRTYTSGVQAVREWYRFHYINIFAQVPAEDKDRMGYQLEDFILTCRFDGESCDARNF 241
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 185 SQFHHPMYGNCYTFNNKNNSNLWMSSMPGVNNGLSLTLRTEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNVRPGVE 264
Cdd:TIGR00859 242 THFHHPMYGNCYTFNSGENSNLLTSSMPGAENGLKLVLDIEQDEYLPLLSTEAGARVMVHSQDEPPFIDDLGFGVRPGTE 321
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 265 TSISMRKEALDSLGGNYGDCTENGSDVPVKNLYPSKYTQQVCIHSCFQENMIKKCGCAYIFYPKPKGVEFCDYLKQSSWG 344
Cdd:TIGR00859 322 TSISMQEDELQRLGGPYGDCTENGSDVPVENLYNSSYSIQACLRSCFQRYMVENCGCAYYHYPLPGGAEYCNYEQHPDWA 401
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 345 YCYYKLQAAFSLDSLGCFSKCRKPCSVTNYKLSAGYSRWPSVKSQDWIFEMLSLQNNYTINNKRNGVAKLNIFFKELNYK 424
Cdd:TIGR00859 402 YCYYKLYAEFDQEELGCFSVCREPCNFTEYKLTLSMARWPSAASEDWLLHVLSRQNEYNITLIRNGIAKLNIFFEELNYR 481
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 425 TNSESPSVTMVSLLSNLGSQWSLWFGSSVLSVVEMAELIFDLLVITLIMLLHRFRsRYWSPGRGARGAREVASTPASSFP 504
Cdd:TIGR00859 482 TIEESPAYNVVTLLSNLGGQMGLWMGASVLCVLELLELIIDLIFITLLRLLWRFR-KWWQRRRGPPYAEPPEPVSADTPP 560
                         490       500       510
                  ....*....|....*....|....*....|....*
gi 1039774591 505 SRFCPHPTSPPPSLPQQGTTPPLALTAPPPAYATL 539
Cdd:TIGR00859 561 SLQLDDPPTFPSALPLPHASGLSLPGTPPPNYNTL 595
ASC pfam00858
Amiloride-sensitive sodium channel;
116-462 7.69e-88

Amiloride-sensitive sodium channel;


Pssm-ID: 459966 [Multi-domain]  Cd Length: 439  Bit Score: 278.28  E-value: 7.69e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 116 FQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPDTSPALEEEALGSFIFTCRFNQA--PCNqANYSQFHHpMYG 193
Cdd:pfam00858  98 YLKFKFLEKILKSLTSNTEELEDELKLLLDFTNELLNSLSGYILNLGLRCEDLIVSCSFGGEkeDCS-ANFTPILT-EYG 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 194 NCYTFNNKNNSNLWMSSM---PGVNNGLSLTLRTEQND-FIPLLSTVTGARVMVHGQDEPAFMDDGGFNVRPGVETSISM 269
Cdd:pfam00858 176 NCYTFNSKDNGSKLYPRRlkgAGSGRGLSLILNIQQSEtYSPLDYQAAGFKVSIHSPGEPPDVDKRGFSVPPGTETSVGI 255
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 270 RKEALDSLGGNYGDCTENgsdvPVKNLYPSKYTQQVCIHSCFQENMIKKCGCAYIFYPKPKGVEFCDYLKqsswgyCYYK 349
Cdd:pfam00858 256 QPTEITTLKRPYGNCTFD----DEKLLYFKSYSQSNCLLECRQNYILKLCGCVPFFYPLPPGTKTGADIP------CLLN 325
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 350 LQA--AFSLDSLGCFSkCRKPCSVTNYKLSAGYSRWPSVKSQDWIFEMLSLQNNYTINNKRNGVAKLNIFFKELNYKTNS 427
Cdd:pfam00858 326 YEDhlLEVNEGLSCQD-CLPPCNETEYETEISYSTWPSLSSQLFLLYYELSTYNNSSSTIRENLAKLNIYFKELNYETYR 404
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1039774591 428 ESPSVTMVSLLSNLGSQWSLWFGSSVLSVVEMAEL 462
Cdd:pfam00858 405 RSPAYTWTDLLSSIGGQLGLFLGASVLSLVEIVYF 439
 
Name Accession Description Interval E-value
ENaC TIGR00859
sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC ...
25-539 0e+00

sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of sodium channels from animals and has no recognizable homologues in other eukaryotes or bacteria. The vertebrate ENaC proteins from epithelial cells cluster tightly together on the phylogenetic tree: voltage-insensitive ENaC homologues are also found in the brain. Eleven sequenced C. elegans proteins, including the degenerins, are distantly related to the vertebrate proteins as well as to each other. At least some ofthese proteins form part of a mechano-transducing complex for touch sensitivity. Other members of the ENaC family, the acid-sensing ion channels, ASIC1-3,are homo- or hetero-oligomeric neuronal H+-gated channels that mediate pain sensation in response to tissue acidosis. The homologous Helix aspersa(FMRF-amide)-activated Na+ channel is the first peptide neurotransmitter-gated ionotropic receptor to be sequenced.Mammalian ENaC is important for the maintenance of Na+ balance and the regulation of blood pressure. Three homologous ENaC subunits, a, b and g, havebeen shown to assemble to form the highly Na+-selective channel.This model is designed from the vertebrate members of the ENaC family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273304 [Multi-domain]  Cd Length: 595  Bit Score: 795.09  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591  25 PVRYTEIKEDLEELDRITEQTLFDLYKYNSSYTRQAGGRRRStRDLRGALPHPLQRLRTPPPPNpARSARSASSSVRDNN 104
Cdd:TIGR00859  84 PYRYSKVKHLLEELDLETAQTLLSLYGYNSSLARSARSNNRN-RIPLVVLDETLPRHPVPRDLF-TRQVHNKLISNRSNS 161
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 105 PQVDRKDWKIGFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPDTSPALEEEALGSFIFTCRFNQAPCNQANY 184
Cdd:TIGR00859 162 PQVNASDWKVGFKLCNNNGSDCFYRTYTSGVQAVREWYRFHYINIFAQVPAEDKDRMGYQLEDFILTCRFDGESCDARNF 241
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 185 SQFHHPMYGNCYTFNNKNNSNLWMSSMPGVNNGLSLTLRTEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNVRPGVE 264
Cdd:TIGR00859 242 THFHHPMYGNCYTFNSGENSNLLTSSMPGAENGLKLVLDIEQDEYLPLLSTEAGARVMVHSQDEPPFIDDLGFGVRPGTE 321
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 265 TSISMRKEALDSLGGNYGDCTENGSDVPVKNLYPSKYTQQVCIHSCFQENMIKKCGCAYIFYPKPKGVEFCDYLKQSSWG 344
Cdd:TIGR00859 322 TSISMQEDELQRLGGPYGDCTENGSDVPVENLYNSSYSIQACLRSCFQRYMVENCGCAYYHYPLPGGAEYCNYEQHPDWA 401
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 345 YCYYKLQAAFSLDSLGCFSKCRKPCSVTNYKLSAGYSRWPSVKSQDWIFEMLSLQNNYTINNKRNGVAKLNIFFKELNYK 424
Cdd:TIGR00859 402 YCYYKLYAEFDQEELGCFSVCREPCNFTEYKLTLSMARWPSAASEDWLLHVLSRQNEYNITLIRNGIAKLNIFFEELNYR 481
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 425 TNSESPSVTMVSLLSNLGSQWSLWFGSSVLSVVEMAELIFDLLVITLIMLLHRFRsRYWSPGRGARGAREVASTPASSFP 504
Cdd:TIGR00859 482 TIEESPAYNVVTLLSNLGGQMGLWMGASVLCVLELLELIIDLIFITLLRLLWRFR-KWWQRRRGPPYAEPPEPVSADTPP 560
                         490       500       510
                  ....*....|....*....|....*....|....*
gi 1039774591 505 SRFCPHPTSPPPSLPQQGTTPPLALTAPPPAYATL 539
Cdd:TIGR00859 561 SLQLDDPPTFPSALPLPHASGLSLPGTPPPNYNTL 595
ASC pfam00858
Amiloride-sensitive sodium channel;
116-462 7.69e-88

Amiloride-sensitive sodium channel;


Pssm-ID: 459966 [Multi-domain]  Cd Length: 439  Bit Score: 278.28  E-value: 7.69e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 116 FQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPDTSPALEEEALGSFIFTCRFNQA--PCNqANYSQFHHpMYG 193
Cdd:pfam00858  98 YLKFKFLEKILKSLTSNTEELEDELKLLLDFTNELLNSLSGYILNLGLRCEDLIVSCSFGGEkeDCS-ANFTPILT-EYG 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 194 NCYTFNNKNNSNLWMSSM---PGVNNGLSLTLRTEQND-FIPLLSTVTGARVMVHGQDEPAFMDDGGFNVRPGVETSISM 269
Cdd:pfam00858 176 NCYTFNSKDNGSKLYPRRlkgAGSGRGLSLILNIQQSEtYSPLDYQAAGFKVSIHSPGEPPDVDKRGFSVPPGTETSVGI 255
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 270 RKEALDSLGGNYGDCTENgsdvPVKNLYPSKYTQQVCIHSCFQENMIKKCGCAYIFYPKPKGVEFCDYLKqsswgyCYYK 349
Cdd:pfam00858 256 QPTEITTLKRPYGNCTFD----DEKLLYFKSYSQSNCLLECRQNYILKLCGCVPFFYPLPPGTKTGADIP------CLLN 325
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 350 LQA--AFSLDSLGCFSkCRKPCSVTNYKLSAGYSRWPSVKSQDWIFEMLSLQNNYTINNKRNGVAKLNIFFKELNYKTNS 427
Cdd:pfam00858 326 YEDhlLEVNEGLSCQD-CLPPCNETEYETEISYSTWPSLSSQLFLLYYELSTYNNSSSTIRENLAKLNIYFKELNYETYR 404
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1039774591 428 ESPSVTMVSLLSNLGSQWSLWFGSSVLSVVEMAEL 462
Cdd:pfam00858 405 RSPAYTWTDLLSSIGGQLGLFLGASVLSLVEIVYF 439
deg-1 TIGR00867
degenerin; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of ...
150-462 9.67e-50

degenerin; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of sodium channels from animals and has no recognizable homologues in other eukaryotes or bacteria. The vertebrate ENaC proteins from epithelial cells cluster tightly together on the phylogenetic tree: voltage-insensitive ENaC homologues are also found in the brain. Eleven sequenced C. elegans proteins, including the degenerins, are distantly related to the vertebrate proteins as well as to each other. At least some ofthese proteins form part of a mechano-transducing complex for touch sensitivity. Other members of the ENaC family, the acid-sensing ion channels, ASIC1-3,are homo- or hetero-oligomeric neuronal H+-gated channels that mediate pain sensation in response to tissue acidosis. The homologous Helix aspersa(FMRF-amide)-activated Na+ channel is the first peptide neurotransmitter-gated ionotropic receptor to be sequenced.Mammalian ENaC is important for the maintenance of Na+ balance and the regulation of blood pressure. Three homologous ENaC subunits, a, b and g, havebeen shown to assemble to form the highly Na+-selective channel.This model is designed from the invertebrate members of the ENaC family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273309 [Multi-domain]  Cd Length: 600  Bit Score: 181.20  E-value: 9.67e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 150 LSRLPDTSPALEEEALGSFIFTCRFNQAPCN-QANYSQFHHPMYGNCYTFNNKNNSNLwMSSMPGVNNGLSLTLRTEQND 228
Cdd:TIGR00867 290 MAALSDKAREALSYTKHELILKCSFNGKPCDiDRDFTLHIDPVFGNCYTFNYNRSVNL-SSSRAGPMYGLRLLLFVNQSD 368
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 229 FIPLlSTVTGARVMVHGQDEPAFMDDGGFNVRPGVETSISMRKEALDSLGGNYGDCTENGSDVP-VKNLYpsKYTQQVCI 307
Cdd:TIGR00867 369 YLPT-TEAAGVRLTIHDKDEFPFPDTFGYSAPTGYISSFGVRLKQMSRLPAPYGNCVDTGKDSSyIYKGY--IYSPEGCH 445
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 308 HSCFQENMIKKCGCAYIFYPKPKGVEFCDylkqsswgycyyklqaAFSLDSLGCFSK----------------CRKPCSV 371
Cdd:TIGR00867 446 RSCFQRLIIAKCGCADPRFPVPEGTRHCQ----------------AFNKTDRECLETltgdlgelhhsifkcrCQQPCQE 509
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039774591 372 TNYKLSAGYSRWPSVKSQ----DWIFEMLSLQNNYTinnkRNGVAKLNIFFKELNYKTNSESPSVTMVSLLSNLGSQWSL 447
Cdd:TIGR00867 510 SIYTTTYSAAKWPSGSLKitlgSCDSNTASECNEYY----RENAAMIEVFYEQLNYELLTESEAYTLVNLIADFGGQLGL 585
                         330
                  ....*....|....*
gi 1039774591 448 WFGSSVLSVVEMAEL 462
Cdd:TIGR00867 586 WLGASVITVCEFVFL 600
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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