NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1070328754|ref|XP_018238048|]
View 

hypothetical protein FOXG_03698 [Fusarium oxysporum f. sp. lycopersici 4287]

Protein Classification

Inp1 domain-containing protein( domain architecture ID 10576882)

Inp1 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Inp1 pfam12634
Inheritance of peroxisomes protein 1; Inp1 is a family of peripheral membrane proteins of ...
 37-167 1.67e-63

Inheritance of peroxisomes protein 1; Inp1 is a family of peripheral membrane proteins of peroxisomes. Inp1p binds Pex25p, Pex30p, and Vps1p, all of which are involved in controlling peroxisome division. The levels of Inp1p vary with the cell cycle, and Inp1 acts as a factor that retains peroxisomes in cells and controls peroxisome division. Inp1p promotes the retention of peroxisomes in mother cells and buds of budding yeast by attaching peroxisomes to as-yet-unidentified cortical structures.


:

Pssm-ID: 432685  Cd Length: 137  Bit Score: 207.14  E-value: 1.67e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070328754  37 VETLYSHPNVKIISFTATGRAYARSPGGPALSNVDPPS----SLSWSSQLERTIAVGPFRIYRAPRSVAFLSCGSALQPI 112
Cdd:pfam12634   2 RETLFKHPNVKIVSFTPPGSSSSSSSSSPTSSDVDYPSgsieTLPWRSKTERTIAVGPLEIYRIPGSVAFLSCGNIVHPI 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1070328754 113 LRKSQCWCIDEVNSRFVLQIRRPN-YWRIELPVDDPEDQQRAEELREVLDKILQFE 167
Cdd:pfam12634  82 LPKSQCWCVDDGESKFVLRIRRPErYWRIEFPVETEEDKEKVEEFKEVLSKILQFE 137
 
Name Accession Description Interval E-value
Inp1 pfam12634
Inheritance of peroxisomes protein 1; Inp1 is a family of peripheral membrane proteins of ...
 37-167 1.67e-63

Inheritance of peroxisomes protein 1; Inp1 is a family of peripheral membrane proteins of peroxisomes. Inp1p binds Pex25p, Pex30p, and Vps1p, all of which are involved in controlling peroxisome division. The levels of Inp1p vary with the cell cycle, and Inp1 acts as a factor that retains peroxisomes in cells and controls peroxisome division. Inp1p promotes the retention of peroxisomes in mother cells and buds of budding yeast by attaching peroxisomes to as-yet-unidentified cortical structures.


Pssm-ID: 432685  Cd Length: 137  Bit Score: 207.14  E-value: 1.67e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070328754  37 VETLYSHPNVKIISFTATGRAYARSPGGPALSNVDPPS----SLSWSSQLERTIAVGPFRIYRAPRSVAFLSCGSALQPI 112
Cdd:pfam12634   2 RETLFKHPNVKIVSFTPPGSSSSSSSSSPTSSDVDYPSgsieTLPWRSKTERTIAVGPLEIYRIPGSVAFLSCGNIVHPI 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1070328754 113 LRKSQCWCIDEVNSRFVLQIRRPN-YWRIELPVDDPEDQQRAEELREVLDKILQFE 167
Cdd:pfam12634  82 LPKSQCWCVDDGESKFVLRIRRPErYWRIEFPVETEEDKEKVEEFKEVLSKILQFE 137
 
Name Accession Description Interval E-value
Inp1 pfam12634
Inheritance of peroxisomes protein 1; Inp1 is a family of peripheral membrane proteins of ...
 37-167 1.67e-63

Inheritance of peroxisomes protein 1; Inp1 is a family of peripheral membrane proteins of peroxisomes. Inp1p binds Pex25p, Pex30p, and Vps1p, all of which are involved in controlling peroxisome division. The levels of Inp1p vary with the cell cycle, and Inp1 acts as a factor that retains peroxisomes in cells and controls peroxisome division. Inp1p promotes the retention of peroxisomes in mother cells and buds of budding yeast by attaching peroxisomes to as-yet-unidentified cortical structures.


Pssm-ID: 432685  Cd Length: 137  Bit Score: 207.14  E-value: 1.67e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1070328754  37 VETLYSHPNVKIISFTATGRAYARSPGGPALSNVDPPS----SLSWSSQLERTIAVGPFRIYRAPRSVAFLSCGSALQPI 112
Cdd:pfam12634   2 RETLFKHPNVKIVSFTPPGSSSSSSSSSPTSSDVDYPSgsieTLPWRSKTERTIAVGPLEIYRIPGSVAFLSCGNIVHPI 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1070328754 113 LRKSQCWCIDEVNSRFVLQIRRPN-YWRIELPVDDPEDQQRAEELREVLDKILQFE 167
Cdd:pfam12634  82 LPKSQCWCVDDGESKFVLRIRRPErYWRIEFPVETEEDKEKVEEFKEVLSKILQFE 137
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH