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Conserved domains on  [gi|2217266715|ref|XP_024302296|]
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uncharacterized protein C1orf185 isoform X3 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4718 super family cl24421
Domain of unknown function (DUF4718); This family of proteins is found in eukaryotes. Proteins ...
 7-99 1.47e-63

Domain of unknown function (DUF4718); This family of proteins is found in eukaryotes. Proteins in this family are typically between 130 and 224 amino acids in length.


The actual alignment was detected with superfamily member pfam15842:

Pssm-ID: 374163  Cd Length: 183  Bit Score: 190.55  E-value: 1.47e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217266715   7 FFNYLTYFLAAGAVTLGIGFFALASALWFLICKRREIFQNSKFKAIDERCRQRPSMAKIKSHSQCVFISRNFHTGRFQLQ 86
Cdd:pfam15842   1 FFNHLTYFLAAGAVSLGIGFFALASALWFLICKRREIFQNSKFKEIDERCSQRPSKPKLKAHSQCVFISRNFHTGIFQLQ 80

                          90
                  ....*....|...
gi 2217266715  87 EEQRKKEAAHIKA 99
Cdd:pfam15842  81 EEQRKKEEAHIKA 93
 
Name Accession Description Interval E-value
DUF4718 pfam15842
Domain of unknown function (DUF4718); This family of proteins is found in eukaryotes. Proteins ...
 7-99 1.47e-63

Domain of unknown function (DUF4718); This family of proteins is found in eukaryotes. Proteins in this family are typically between 130 and 224 amino acids in length.


Pssm-ID: 374163  Cd Length: 183  Bit Score: 190.55  E-value: 1.47e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217266715   7 FFNYLTYFLAAGAVTLGIGFFALASALWFLICKRREIFQNSKFKAIDERCRQRPSMAKIKSHSQCVFISRNFHTGRFQLQ 86
Cdd:pfam15842   1 FFNHLTYFLAAGAVSLGIGFFALASALWFLICKRREIFQNSKFKEIDERCSQRPSKPKLKAHSQCVFISRNFHTGIFQLQ 80

                          90
                  ....*....|...
gi 2217266715  87 EEQRKKEAAHIKA 99
Cdd:pfam15842  81 EEQRKKEEAHIKA 93
 
Name Accession Description Interval E-value
DUF4718 pfam15842
Domain of unknown function (DUF4718); This family of proteins is found in eukaryotes. Proteins ...
 7-99 1.47e-63

Domain of unknown function (DUF4718); This family of proteins is found in eukaryotes. Proteins in this family are typically between 130 and 224 amino acids in length.


Pssm-ID: 374163  Cd Length: 183  Bit Score: 190.55  E-value: 1.47e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217266715   7 FFNYLTYFLAAGAVTLGIGFFALASALWFLICKRREIFQNSKFKAIDERCRQRPSMAKIKSHSQCVFISRNFHTGRFQLQ 86
Cdd:pfam15842   1 FFNHLTYFLAAGAVSLGIGFFALASALWFLICKRREIFQNSKFKEIDERCSQRPSKPKLKAHSQCVFISRNFHTGIFQLQ 80

                          90
                  ....*....|...
gi 2217266715  87 EEQRKKEAAHIKA 99
Cdd:pfam15842  81 EEQRKKEEAHIKA 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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