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Conserved domains on  [gi|1381487808|ref|XP_024645919|]
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uncharacterized protein C1orf167-like [Macaca nemestrina]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF4684 super family cl24339
Domain of unknown function (DUF4684); This family of proteins is found in eukaryotes. Proteins ...
25-223 3.66e-33

Domain of unknown function (DUF4684); This family of proteins is found in eukaryotes. Proteins in this family are typically between 531 and 1277 amino acids in length.


The actual alignment was detected with superfamily member pfam15736:

Pssm-ID: 464833  Cd Length: 435  Bit Score: 125.09  E-value: 3.66e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1381487808  25 TRSCWTQATGLVPPAPSLQCSLGGQRKPRGMAWAQRCGEHSLCPAFQLWPQWPGQSSWVPGLPlwmrDQGPRGHSSPEPR 104
Cdd:pfam15736 236 TRSCWTQATGPVLPSPTLQHSLGGRRKPGETAWAQSKEQPSLCPAFQLWLQWPGDGSWAPGLS----PTGPGGDCSPETR 311
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1381487808 105 ALKAQSeahkRRLGRkyLQRRWLKALLRGLRGSQQAR----CLAAAWQHWVDAQGAEQLARTLLREWHLRSAWRTWWQRI 180
Cdd:pfam15736 312 ALQGED----RRLGR--SRSLDEQAQVRGSKLERARSghrgLHIQEEVPAAAVQVAASCPAQAGGCPRGRAAGADPAQAV 385
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1381487808 181 LR----LRVAQQLKQQEDGWVLS---QAFKKWHQRLAARSPRRGAASSPR 223
Cdd:pfam15736 386 APemglADVAAAGPAAAGSAVTAagrQAFKKWHQHLAARAPRGGAPSSPR 435
 
Name Accession Description Interval E-value
DUF4684 pfam15736
Domain of unknown function (DUF4684); This family of proteins is found in eukaryotes. Proteins ...
25-223 3.66e-33

Domain of unknown function (DUF4684); This family of proteins is found in eukaryotes. Proteins in this family are typically between 531 and 1277 amino acids in length.


Pssm-ID: 464833  Cd Length: 435  Bit Score: 125.09  E-value: 3.66e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1381487808  25 TRSCWTQATGLVPPAPSLQCSLGGQRKPRGMAWAQRCGEHSLCPAFQLWPQWPGQSSWVPGLPlwmrDQGPRGHSSPEPR 104
Cdd:pfam15736 236 TRSCWTQATGPVLPSPTLQHSLGGRRKPGETAWAQSKEQPSLCPAFQLWLQWPGDGSWAPGLS----PTGPGGDCSPETR 311
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1381487808 105 ALKAQSeahkRRLGRkyLQRRWLKALLRGLRGSQQAR----CLAAAWQHWVDAQGAEQLARTLLREWHLRSAWRTWWQRI 180
Cdd:pfam15736 312 ALQGED----RRLGR--SRSLDEQAQVRGSKLERARSghrgLHIQEEVPAAAVQVAASCPAQAGGCPRGRAAGADPAQAV 385
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1381487808 181 LR----LRVAQQLKQQEDGWVLS---QAFKKWHQRLAARSPRRGAASSPR 223
Cdd:pfam15736 386 APemglADVAAAGPAAAGSAVTAagrQAFKKWHQHLAARAPRGGAPSSPR 435
 
Name Accession Description Interval E-value
DUF4684 pfam15736
Domain of unknown function (DUF4684); This family of proteins is found in eukaryotes. Proteins ...
25-223 3.66e-33

Domain of unknown function (DUF4684); This family of proteins is found in eukaryotes. Proteins in this family are typically between 531 and 1277 amino acids in length.


Pssm-ID: 464833  Cd Length: 435  Bit Score: 125.09  E-value: 3.66e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1381487808  25 TRSCWTQATGLVPPAPSLQCSLGGQRKPRGMAWAQRCGEHSLCPAFQLWPQWPGQSSWVPGLPlwmrDQGPRGHSSPEPR 104
Cdd:pfam15736 236 TRSCWTQATGPVLPSPTLQHSLGGRRKPGETAWAQSKEQPSLCPAFQLWLQWPGDGSWAPGLS----PTGPGGDCSPETR 311
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1381487808 105 ALKAQSeahkRRLGRkyLQRRWLKALLRGLRGSQQAR----CLAAAWQHWVDAQGAEQLARTLLREWHLRSAWRTWWQRI 180
Cdd:pfam15736 312 ALQGED----RRLGR--SRSLDEQAQVRGSKLERARSghrgLHIQEEVPAAAVQVAASCPAQAGGCPRGRAAGADPAQAV 385
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1381487808 181 LR----LRVAQQLKQQEDGWVLS---QAFKKWHQRLAARSPRRGAASSPR 223
Cdd:pfam15736 386 APemglADVAAAGPAAAGSAVTAagrQAFKKWHQHLAARAPRGGAPSSPR 435
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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