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Conserved domains on  [gi|1620184996|ref|XP_028541433|]
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Plasmodium exported protein (PHISTa), unknown function [Plasmodium sp. gorilla clade G2]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRESAN super family cl23884
Plasmodium RESA N-terminal; The short, four-helical domain first identified in the Plasmodium ...
 139-198 3.06e-09

Plasmodium RESA N-terminal; The short, four-helical domain first identified in the Plasmodium export proteins PHISTa and PHISTc has been extended to become this six-helical PRESAN domain identified in the P. falciparum-specific RESA-type (Ring-infected erythrocyte surface antigen) proteins in association with the DnaJ domain. Overall, at least 67 proteins have been detected in P. falciparum with complete copies of the PRESAN domain. No versions of this domain were detected in other apicomplexan genera, suggesting that the domain was 'invented' after the divergence of the lineage leading to the genus Plasmodium undergoing a dramatic proliferation only in P. falciparum. A secondary structure-prediction derived from the multiple alignment of the PRESAN family reveals that it is composed of an all-helical fold with six conserved helical segments. There is some evidence it might localize to membranes.


The actual alignment was detected with superfamily member TIGR01639:

Pssm-ID: 451595  Cd Length: 61  Bit Score: 52.26  E-value: 3.06e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1620184996 139 INYNDLSKNLTEKELCDVLNSLKECPPKEDLRNIWNHTVGVAKEGLDDIQKELKASIQKY 198
Cdd:TIGR01639   1 IKYNDLSKKLTKEELNEMINSLDEIPNRNDMLIIWNQVHGIERDKFVKMQENLKEYIQKL 60
 
Name Accession Description Interval E-value
P_fal_TIGR01639 TIGR01639
Plasmodium falciparum uncharacterized domain TIGR01639; This model represents a conserved ...
 139-198 3.06e-09

Plasmodium falciparum uncharacterized domain TIGR01639; This model represents a conserved sequence region of about 60 amino acids found in over 40 predicted proteins of Plasmodium falciparum. It is not found elsewhere, including closely related species such as Plasmodium yoelii. No member of this family is characterized.


Pssm-ID: 130700  Cd Length: 61  Bit Score: 52.26  E-value: 3.06e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1620184996 139 INYNDLSKNLTEKELCDVLNSLKECPPKEDLRNIWNHTVGVAKEGLDDIQKELKASIQKY 198
Cdd:TIGR01639   1 IKYNDLSKKLTKEELNEMINSLDEIPNRNDMLIIWNQVHGIERDKFVKMQENLKEYIQKL 60
PRESAN pfam09687
Plasmodium RESA N-terminal; The short, four-helical domain first identified in the Plasmodium ...
 147-278 1.02e-07

Plasmodium RESA N-terminal; The short, four-helical domain first identified in the Plasmodium export proteins PHISTa and PHISTc has been extended to become this six-helical PRESAN domain identified in the P. falciparum-specific RESA-type (Ring-infected erythrocyte surface antigen) proteins in association with the DnaJ domain. Overall, at least 67 proteins have been detected in P. falciparum with complete copies of the PRESAN domain. No versions of this domain were detected in other apicomplexan genera, suggesting that the domain was 'invented' after the divergence of the lineage leading to the genus Plasmodium undergoing a dramatic proliferation only in P. falciparum. A secondary structure-prediction derived from the multiple alignment of the PRESAN family reveals that it is composed of an all-helical fold with six conserved helical segments. There is some evidence it might localize to membranes.


Pssm-ID: 430754  Cd Length: 125  Bit Score: 49.97  E-value: 1.02e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1620184996 147 NLTEKELCDVLNSLKECPPKEDLRNIWNHTVGVAKEGLDDIQKELKASIQKYLDNdiyvqnerNNSKTYVYGNIWDQNIS 226
Cdd:pfam09687   1 NLTEEEINKKINSLNEVVSKKDMYIIWNYVNKNEKKKYYNMIEKLWKYFEELAKK--------YNIPEEYKKKLWKECYK 72

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1620184996 227 IFYKTLGTEEILYAKNFFSLINGKH-TLDDILKFLYSFIEHFKTLKKQLHQYH 278
Cdd:pfam09687  73 EITKELKKKEKFYNKDFYSFLNKGKlSRDEFKEFINSCRKSWKKLRKELEKKW 125
 
Name Accession Description Interval E-value
P_fal_TIGR01639 TIGR01639
Plasmodium falciparum uncharacterized domain TIGR01639; This model represents a conserved ...
 139-198 3.06e-09

Plasmodium falciparum uncharacterized domain TIGR01639; This model represents a conserved sequence region of about 60 amino acids found in over 40 predicted proteins of Plasmodium falciparum. It is not found elsewhere, including closely related species such as Plasmodium yoelii. No member of this family is characterized.


Pssm-ID: 130700  Cd Length: 61  Bit Score: 52.26  E-value: 3.06e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1620184996 139 INYNDLSKNLTEKELCDVLNSLKECPPKEDLRNIWNHTVGVAKEGLDDIQKELKASIQKY 198
Cdd:TIGR01639   1 IKYNDLSKKLTKEELNEMINSLDEIPNRNDMLIIWNQVHGIERDKFVKMQENLKEYIQKL 60
PRESAN pfam09687
Plasmodium RESA N-terminal; The short, four-helical domain first identified in the Plasmodium ...
 147-278 1.02e-07

Plasmodium RESA N-terminal; The short, four-helical domain first identified in the Plasmodium export proteins PHISTa and PHISTc has been extended to become this six-helical PRESAN domain identified in the P. falciparum-specific RESA-type (Ring-infected erythrocyte surface antigen) proteins in association with the DnaJ domain. Overall, at least 67 proteins have been detected in P. falciparum with complete copies of the PRESAN domain. No versions of this domain were detected in other apicomplexan genera, suggesting that the domain was 'invented' after the divergence of the lineage leading to the genus Plasmodium undergoing a dramatic proliferation only in P. falciparum. A secondary structure-prediction derived from the multiple alignment of the PRESAN family reveals that it is composed of an all-helical fold with six conserved helical segments. There is some evidence it might localize to membranes.


Pssm-ID: 430754  Cd Length: 125  Bit Score: 49.97  E-value: 1.02e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1620184996 147 NLTEKELCDVLNSLKECPPKEDLRNIWNHTVGVAKEGLDDIQKELKASIQKYLDNdiyvqnerNNSKTYVYGNIWDQNIS 226
Cdd:pfam09687   1 NLTEEEINKKINSLNEVVSKKDMYIIWNYVNKNEKKKYYNMIEKLWKYFEELAKK--------YNIPEEYKKKLWKECYK 72

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1620184996 227 IFYKTLGTEEILYAKNFFSLINGKH-TLDDILKFLYSFIEHFKTLKKQLHQYH 278
Cdd:pfam09687  73 EITKELKKKEKFYNKDFYSFLNKGKlSRDEFKEFINSCRKSWKKLRKELEKKW 125
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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