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Conserved domains on  [gi|1907132578|ref|XP_036017516|]
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inositol 1,4,5-trisphosphate receptor-interacting protein isoform X1 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Mab-21_C super family cl48430
Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In ...
 411-485 4.63e-03

Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In C. elegans these proteins are required for several aspects of embryonic development.


The actual alignment was detected with superfamily member pfam20266:

Pssm-ID: 466416  Cd Length: 102  Bit Score: 36.83  E-value: 4.63e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907132578 411 CLQIASFLLSKQTR--LTGPSGLSDYHLKTALLHLLLSR-QASDWKASKLDVRLQDLFCFLERSLLEKKLYHFFMGNH 485
Cdd:pfam20266   5 CLRILKKLKEPGKRdvKTELSKICSYHLKTLFLWECEKHpDDSDWDKENLSDRFLGLLEELHKCLRNGKLPHFFIPKL 82
 
Name Accession Description Interval E-value
Mab-21_C pfam20266
Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In ...
 411-485 4.63e-03

Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In C. elegans these proteins are required for several aspects of embryonic development.


Pssm-ID: 466416  Cd Length: 102  Bit Score: 36.83  E-value: 4.63e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907132578 411 CLQIASFLLSKQTR--LTGPSGLSDYHLKTALLHLLLSR-QASDWKASKLDVRLQDLFCFLERSLLEKKLYHFFMGNH 485
Cdd:pfam20266   5 CLRILKKLKEPGKRdvKTELSKICSYHLKTLFLWECEKHpDDSDWDKENLSDRFLGLLEELHKCLRNGKLPHFFIPKL 82
 
Name Accession Description Interval E-value
Mab-21_C pfam20266
Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In ...
 411-485 4.63e-03

Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In C. elegans these proteins are required for several aspects of embryonic development.


Pssm-ID: 466416  Cd Length: 102  Bit Score: 36.83  E-value: 4.63e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907132578 411 CLQIASFLLSKQTR--LTGPSGLSDYHLKTALLHLLLSR-QASDWKASKLDVRLQDLFCFLERSLLEKKLYHFFMGNH 485
Cdd:pfam20266   5 CLRILKKLKEPGKRdvKTELSKICSYHLKTLFLWECEKHpDDSDWDKENLSDRFLGLLEELHKCLRNGKLPHFFIPKL 82
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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