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Conserved domains on  [gi|1934785922|ref|XP_037678839|]
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peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 isoform X2 [Choloepus didactylus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SurA super family cl34035
Peptidyl-prolyl isomerase, parvulin family [Posttranslational modification, protein turnover, ...
 38-79 7.46e-03

Peptidyl-prolyl isomerase, parvulin family [Posttranslational modification, protein turnover, chaperones];


The actual alignment was detected with superfamily member COG0760:

Pssm-ID: 440523 [Multi-domain]  Cd Length: 143  Bit Score: 33.78  E-value: 7.46e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1934785922  38 VKVRYIL---------CEKHSRIMEGMEKLKSGMRFNEVATQYSEDK--ARQG 79
Cdd:COG0760     9 VRASHILvkvppsedrAKAEAKAEELLAQLKAGADFAELAKEYSQDPgsAANG 61
 
Name Accession Description Interval E-value
SurA COG0760
Peptidyl-prolyl isomerase, parvulin family [Posttranslational modification, protein turnover, ...
 38-79 7.46e-03

Peptidyl-prolyl isomerase, parvulin family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440523 [Multi-domain]  Cd Length: 143  Bit Score: 33.78  E-value: 7.46e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1934785922  38 VKVRYIL---------CEKHSRIMEGMEKLKSGMRFNEVATQYSEDK--ARQG 79
Cdd:COG0760     9 VRASHILvkvppsedrAKAEAKAEELLAQLKAGADFAELAKEYSQDPgsAANG 61
 
Name Accession Description Interval E-value
SurA COG0760
Peptidyl-prolyl isomerase, parvulin family [Posttranslational modification, protein turnover, ...
 38-79 7.46e-03

Peptidyl-prolyl isomerase, parvulin family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440523 [Multi-domain]  Cd Length: 143  Bit Score: 33.78  E-value: 7.46e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1934785922  38 VKVRYIL---------CEKHSRIMEGMEKLKSGMRFNEVATQYSEDK--ARQG 79
Cdd:COG0760     9 VRASHILvkvppsedrAKAEAKAEELLAQLKAGADFAELAKEYSQDPgsAANG 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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