View
Concise Results
Standard Results
Full Results
VSP [Giardia intestinalis]
Protein Classification
serine/threonine-protein kinase ( domain architecture ID 13281737 )
serine/threonine-protein kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates
List of domain hits
Name
Accession
Description
Interval
E-value
PTZ00382
PTZ00382 Variant-specific surface protein (VSP); Provisional
594-689
1.94e-33
Variant-specific surface protein (VSP); Provisional
Pssm-ID: 173574 [Multi-domain]
Cd Length: 96
Bit Score: 123.52
E-value: 1.94e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 594 M A PAVCTSCDS S KKPN R DGSGCVLCSVG G CKSCV M D NI CGECNSGFSLDNGKCVSSGANRSGLS A GAIAGISVAVVAVVG 673
Cdd:PTZ00382 1 M T PAVCTSCDS D KKPN K DGSGCVLCSVG N CKSCV V D GV CGECNSGFSLDNGKCVSSGANRSGLS T GAIAGISVAVVAVVG 80
90
....*....|....*.
gi 1940870138 674 GLVGFLCWWFVCRGKA 689
Cdd:PTZ00382 81 GLVGFLCWWFVCRGKA 96
PTZ00214 super family
cl31756 high cysteine membrane protein Group 4; Provisional
21-635
9.78e-26
high cysteine membrane protein Group 4; Provisional
PTZ00214 :Pssm-ID: 173479 [Multi-domain]
Cd Length: 800
Bit Score: 113.09
E-value: 9.78e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 21 G DHAAT C QTGK C ETV GS A E I CT E C KT G G VP VD G F C RPF gs P QA A AAG C TKAGGAALDKMTAT ce K CGDGY FLF M GGCY K - 99
Cdd:PTZ00214 30 G GKQEN C AQNR C ILL GS D E L CT Q C VS G Y VP IN G K C QLY -- P GD A SSV C IPDDASSPTRCIEC -- K SEQNV FLF Y GGCY T i 105
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 100 TTDGP GS E IC TK A EG G L CTEC --- K T ANGL F K NP AATPEK gs E CILCSD IN G AD GY T G VAN C AQ C TKSDSN K - G A A T CT A 175
Cdd:PTZ00214 106 DQSTV GS F IC SQ A SN G R CTEC nvs T T EKYV F T NP DTSAAE -- K CILCSD TV G FN GY K G ASG C LD C LPPITD K i G I A L CT K 183
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 176 C QAG ------ Y YK D F Q ACS K CDGT C LT cetsa AQ CTSC PE g KY L KGDKS C VNNNGC TG ---------------------- 227
Cdd:PTZ00214 184 C HYT eqnrhf Y PI D Y Q CQA K GLHN C VN ----- GY CTSC YK - TH L FYEYG C YSRHSS TG faicaeanqyeldnvtickecv 257
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 228 NT YAD P ES G K C LPCN --- T I DQACTQ C EV D ST tk K PK CT N C G --------- G QKMVKTAID G TTT C -- VDANG C ATS N VD 293
Cdd:PTZ00214 258 NT SYA P KN G G C TLVG esa S I ESLFSD C TK D AS -- K GL CT A C S ssaksflfy G GCYDRDSHI G SRL C sr IGSGV C TQW N SA 335
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 294 GSHFLN --- D GSTKCI LC S D dsesl EA N K G TP GC K TC KK N GAKP TC SE C LD GY YN sgnggt V TCEA C GAN C ATC T QAGND 370
Cdd:PTZ00214 336 FDFIFS knd D NNGDGY LC G D ----- AT N G G VS GC A TC GY N SGAV TC TR C SA GY LG ------ V DGKS C SES C SGD T RGVCT 404
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 371 K CTK ------------ CKP G F F mkgn GPT G E C VA C dnaqgg I D G CA E C t K ES T g P LK C TK C K P NR kp AGTSDNYTCTEKT 438
Cdd:PTZ00214 405 K VAE gsestevscrcv CKP T F Y ---- NSS G T C TP C ------ T D S CA V C - K DG T - P TG C QQ C S P GK -- ILEFSIVSSESAD 470
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 439 C E D PTAC G GTAGS C d A I V ID DQ gttk H YC SY C G D S S QA P ID G L C ASEA Q KAG -- NTC ANG V CT Q C TNNY FL YM GGCY S T Q 516
Cdd:PTZ00214 471 C V D QCSV G SECAE C - G I T ID GS ---- R YC TR C K D A S TY P FN G V C IPNT Q RDA yc TST ANG A CT T C SGAA FL MN GGCY T T E 545
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 517 KA PGS FM C KTAG N t G I CT EAANN r Y FVV P GAS -- NT D QSV LAC SN P LGTLTGTGDTA K AYVGVE G CS -- Q C TA P A A LS DG 592
Cdd:PTZ00214 546 HY PGS TI C DKQS N - G K CT TTKKG - Y GIS P DGK ll EC D PTC LAC TA P GPGRCTRCPSD K LLKRAS G AA tg S C VD P G A CV DG 623
650 660 670 680
....*....|....*....|....*....|....*....|...
gi 1940870138 593 GM A pavctscdsskkpnr DG SG C VL C SVG GCK S C VMDNI C G EC 635
Cdd:PTZ00214 624 YY A --------------- DG DA C LP C ATP GCK T C GHASF C T EC 651
Name
Accession
Description
Interval
E-value
PTZ00382
PTZ00382 Variant-specific surface protein (VSP); Provisional
594-689
1.94e-33
Variant-specific surface protein (VSP); Provisional
Pssm-ID: 173574 [Multi-domain]
Cd Length: 96
Bit Score: 123.52
E-value: 1.94e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 594 M A PAVCTSCDS S KKPN R DGSGCVLCSVG G CKSCV M D NI CGECNSGFSLDNGKCVSSGANRSGLS A GAIAGISVAVVAVVG 673
Cdd:PTZ00382 1 M T PAVCTSCDS D KKPN K DGSGCVLCSVG N CKSCV V D GV CGECNSGFSLDNGKCVSSGANRSGLS T GAIAGISVAVVAVVG 80
90
....*....|....*.
gi 1940870138 674 GLVGFLCWWFVCRGKA 689
Cdd:PTZ00382 81 GLVGFLCWWFVCRGKA 96
PTZ00214
PTZ00214 high cysteine membrane protein Group 4; Provisional
21-635
9.78e-26
high cysteine membrane protein Group 4; Provisional
Pssm-ID: 173479 [Multi-domain]
Cd Length: 800
Bit Score: 113.09
E-value: 9.78e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 21 G DHAAT C QTGK C ETV GS A E I CT E C KT G G VP VD G F C RPF gs P QA A AAG C TKAGGAALDKMTAT ce K CGDGY FLF M GGCY K - 99
Cdd:PTZ00214 30 G GKQEN C AQNR C ILL GS D E L CT Q C VS G Y VP IN G K C QLY -- P GD A SSV C IPDDASSPTRCIEC -- K SEQNV FLF Y GGCY T i 105
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 100 TTDGP GS E IC TK A EG G L CTEC --- K T ANGL F K NP AATPEK gs E CILCSD IN G AD GY T G VAN C AQ C TKSDSN K - G A A T CT A 175
Cdd:PTZ00214 106 DQSTV GS F IC SQ A SN G R CTEC nvs T T EKYV F T NP DTSAAE -- K CILCSD TV G FN GY K G ASG C LD C LPPITD K i G I A L CT K 183
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 176 C QAG ------ Y YK D F Q ACS K CDGT C LT cetsa AQ CTSC PE g KY L KGDKS C VNNNGC TG ---------------------- 227
Cdd:PTZ00214 184 C HYT eqnrhf Y PI D Y Q CQA K GLHN C VN ----- GY CTSC YK - TH L FYEYG C YSRHSS TG faicaeanqyeldnvtickecv 257
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 228 NT YAD P ES G K C LPCN --- T I DQACTQ C EV D ST tk K PK CT N C G --------- G QKMVKTAID G TTT C -- VDANG C ATS N VD 293
Cdd:PTZ00214 258 NT SYA P KN G G C TLVG esa S I ESLFSD C TK D AS -- K GL CT A C S ssaksflfy G GCYDRDSHI G SRL C sr IGSGV C TQW N SA 335
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 294 GSHFLN --- D GSTKCI LC S D dsesl EA N K G TP GC K TC KK N GAKP TC SE C LD GY YN sgnggt V TCEA C GAN C ATC T QAGND 370
Cdd:PTZ00214 336 FDFIFS knd D NNGDGY LC G D ----- AT N G G VS GC A TC GY N SGAV TC TR C SA GY LG ------ V DGKS C SES C SGD T RGVCT 404
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 371 K CTK ------------ CKP G F F mkgn GPT G E C VA C dnaqgg I D G CA E C t K ES T g P LK C TK C K P NR kp AGTSDNYTCTEKT 438
Cdd:PTZ00214 405 K VAE gsestevscrcv CKP T F Y ---- NSS G T C TP C ------ T D S CA V C - K DG T - P TG C QQ C S P GK -- ILEFSIVSSESAD 470
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 439 C E D PTAC G GTAGS C d A I V ID DQ gttk H YC SY C G D S S QA P ID G L C ASEA Q KAG -- NTC ANG V CT Q C TNNY FL YM GGCY S T Q 516
Cdd:PTZ00214 471 C V D QCSV G SECAE C - G I T ID GS ---- R YC TR C K D A S TY P FN G V C IPNT Q RDA yc TST ANG A CT T C SGAA FL MN GGCY T T E 545
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 517 KA PGS FM C KTAG N t G I CT EAANN r Y FVV P GAS -- NT D QSV LAC SN P LGTLTGTGDTA K AYVGVE G CS -- Q C TA P A A LS DG 592
Cdd:PTZ00214 546 HY PGS TI C DKQS N - G K CT TTKKG - Y GIS P DGK ll EC D PTC LAC TA P GPGRCTRCPSD K LLKRAS G AA tg S C VD P G A CV DG 623
650 660 670 680
....*....|....*....|....*....|....*....|...
gi 1940870138 593 GM A pavctscdsskkpnr DG SG C VL C SVG GCK S C VMDNI C G EC 635
Cdd:PTZ00214 624 YY A --------------- DG DA C LP C ATP GCK T C GHASF C T EC 651
VSP
pfam03302 Giardia variant-specific surface protein;
334-689
4.29e-14
Giardia variant-specific surface protein;
Pssm-ID: 146106 [Multi-domain]
Cd Length: 397
Bit Score: 74.62
E-value: 4.29e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 334 PT C SECLDG YY NSGNGGTVT C EA C G - ANC A TC TQA G nd K C TK C KP GF FMK G N gptg E C VA C DNA qggidg C AE C TKESTG 412
Cdd:pfam03302 56 DD C AKIGNY YY TTNANNKKI C KE C T v ANC K TC EDQ G -- Q C QA C ND GF YKS G D ---- A C SP C HES ------ C KT C SGGTAS 123
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 413 pl K CT K C KPNRKPAGTS D N ytc T EK TC EDPTAC G GT AG S C DAIVIDDQ GT T kh YCS Y C GDSSQA P ID G L C A S E A QK A GN T 492
Cdd:pfam03302 124 -- D CT E C LTGKALRYGN D G --- T KG TC GEGCTT G TG AG A C KTCGLTID GT S -- YCS E C ATETEY P QN G V C T S T A AR A TA T 196
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 493 C ----- ANG V C TQ C T N N YF LYM GGCY S T Q K A PG SFM C KT A GNT G I C TEA A nnryfvv PG ASNTDQSVLA CS NPLG T L T GT 567
Cdd:pfam03302 197 C kassv ANG M C SS C A N G YF RMN GGCY E T T K F PG KSV C EE A NSG G T C QKE A ------- PG YKLNNGDLVT CS PGCK T C T SN 269
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 568 GDTAKAYV G VEGC S QCTAPAAL S DGGMAP A VC T SCDSSKKPNRD G S GCV L C S ---------- V G GC KS C VMDN icge C N S 637
Cdd:pfam03302 270 TVCTTCMD G YVKT S DSCTKCDS S CETCTG A TT T CKTCATGYYKS G T GCV S C T ssesdngitg V K GC LN C APPS ---- N N K 345
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1940870138 638 G FS L DNGKCV S SGA N R SGLS A GAIAGISVAVV A VVGGLVGFLCWWF V CRGKA 689
Cdd:pfam03302 346 G SV L CYLIKD S GST N K SGLS T GAIAGISVAVV I VVGGLVGFLCWWF I CRGKA 397
FU
smart00261 Furin-like repeats;
353-390
5.30e-03
Furin-like repeats;
Pssm-ID: 214589 [Multi-domain]
Cd Length: 45
Bit Score: 35.18
E-value: 5.30e-03
10 20 30
....*....|....*....|....*....|....*...
gi 1940870138 353 T C EA C GAN CATCT QA G N D K CT K CK P GFF MK G NGPTG EC 390
Cdd:smart00261 3 E C KP C HPE CATCT GP G P D D CT S CK H GFF LD G GKCVS EC 40
Name
Accession
Description
Interval
E-value
PTZ00382
PTZ00382 Variant-specific surface protein (VSP); Provisional
594-689
1.94e-33
Variant-specific surface protein (VSP); Provisional
Pssm-ID: 173574 [Multi-domain]
Cd Length: 96
Bit Score: 123.52
E-value: 1.94e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 594 M A PAVCTSCDS S KKPN R DGSGCVLCSVG G CKSCV M D NI CGECNSGFSLDNGKCVSSGANRSGLS A GAIAGISVAVVAVVG 673
Cdd:PTZ00382 1 M T PAVCTSCDS D KKPN K DGSGCVLCSVG N CKSCV V D GV CGECNSGFSLDNGKCVSSGANRSGLS T GAIAGISVAVVAVVG 80
90
....*....|....*.
gi 1940870138 674 GLVGFLCWWFVCRGKA 689
Cdd:PTZ00382 81 GLVGFLCWWFVCRGKA 96
PTZ00214
PTZ00214 high cysteine membrane protein Group 4; Provisional
21-635
9.78e-26
high cysteine membrane protein Group 4; Provisional
Pssm-ID: 173479 [Multi-domain]
Cd Length: 800
Bit Score: 113.09
E-value: 9.78e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 21 G DHAAT C QTGK C ETV GS A E I CT E C KT G G VP VD G F C RPF gs P QA A AAG C TKAGGAALDKMTAT ce K CGDGY FLF M GGCY K - 99
Cdd:PTZ00214 30 G GKQEN C AQNR C ILL GS D E L CT Q C VS G Y VP IN G K C QLY -- P GD A SSV C IPDDASSPTRCIEC -- K SEQNV FLF Y GGCY T i 105
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 100 TTDGP GS E IC TK A EG G L CTEC --- K T ANGL F K NP AATPEK gs E CILCSD IN G AD GY T G VAN C AQ C TKSDSN K - G A A T CT A 175
Cdd:PTZ00214 106 DQSTV GS F IC SQ A SN G R CTEC nvs T T EKYV F T NP DTSAAE -- K CILCSD TV G FN GY K G ASG C LD C LPPITD K i G I A L CT K 183
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 176 C QAG ------ Y YK D F Q ACS K CDGT C LT cetsa AQ CTSC PE g KY L KGDKS C VNNNGC TG ---------------------- 227
Cdd:PTZ00214 184 C HYT eqnrhf Y PI D Y Q CQA K GLHN C VN ----- GY CTSC YK - TH L FYEYG C YSRHSS TG faicaeanqyeldnvtickecv 257
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 228 NT YAD P ES G K C LPCN --- T I DQACTQ C EV D ST tk K PK CT N C G --------- G QKMVKTAID G TTT C -- VDANG C ATS N VD 293
Cdd:PTZ00214 258 NT SYA P KN G G C TLVG esa S I ESLFSD C TK D AS -- K GL CT A C S ssaksflfy G GCYDRDSHI G SRL C sr IGSGV C TQW N SA 335
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 294 GSHFLN --- D GSTKCI LC S D dsesl EA N K G TP GC K TC KK N GAKP TC SE C LD GY YN sgnggt V TCEA C GAN C ATC T QAGND 370
Cdd:PTZ00214 336 FDFIFS knd D NNGDGY LC G D ----- AT N G G VS GC A TC GY N SGAV TC TR C SA GY LG ------ V DGKS C SES C SGD T RGVCT 404
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 371 K CTK ------------ CKP G F F mkgn GPT G E C VA C dnaqgg I D G CA E C t K ES T g P LK C TK C K P NR kp AGTSDNYTCTEKT 438
Cdd:PTZ00214 405 K VAE gsestevscrcv CKP T F Y ---- NSS G T C TP C ------ T D S CA V C - K DG T - P TG C QQ C S P GK -- ILEFSIVSSESAD 470
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 439 C E D PTAC G GTAGS C d A I V ID DQ gttk H YC SY C G D S S QA P ID G L C ASEA Q KAG -- NTC ANG V CT Q C TNNY FL YM GGCY S T Q 516
Cdd:PTZ00214 471 C V D QCSV G SECAE C - G I T ID GS ---- R YC TR C K D A S TY P FN G V C IPNT Q RDA yc TST ANG A CT T C SGAA FL MN GGCY T T E 545
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 517 KA PGS FM C KTAG N t G I CT EAANN r Y FVV P GAS -- NT D QSV LAC SN P LGTLTGTGDTA K AYVGVE G CS -- Q C TA P A A LS DG 592
Cdd:PTZ00214 546 HY PGS TI C DKQS N - G K CT TTKKG - Y GIS P DGK ll EC D PTC LAC TA P GPGRCTRCPSD K LLKRAS G AA tg S C VD P G A CV DG 623
650 660 670 680
....*....|....*....|....*....|....*....|...
gi 1940870138 593 GM A pavctscdsskkpnr DG SG C VL C SVG GCK S C VMDNI C G EC 635
Cdd:PTZ00214 624 YY A --------------- DG DA C LP C ATP GCK T C GHASF C T EC 651
VSP
pfam03302 Giardia variant-specific surface protein;
334-689
4.29e-14
Giardia variant-specific surface protein;
Pssm-ID: 146106 [Multi-domain]
Cd Length: 397
Bit Score: 74.62
E-value: 4.29e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 334 PT C SECLDG YY NSGNGGTVT C EA C G - ANC A TC TQA G nd K C TK C KP GF FMK G N gptg E C VA C DNA qggidg C AE C TKESTG 412
Cdd:pfam03302 56 DD C AKIGNY YY TTNANNKKI C KE C T v ANC K TC EDQ G -- Q C QA C ND GF YKS G D ---- A C SP C HES ------ C KT C SGGTAS 123
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 413 pl K CT K C KPNRKPAGTS D N ytc T EK TC EDPTAC G GT AG S C DAIVIDDQ GT T kh YCS Y C GDSSQA P ID G L C A S E A QK A GN T 492
Cdd:pfam03302 124 -- D CT E C LTGKALRYGN D G --- T KG TC GEGCTT G TG AG A C KTCGLTID GT S -- YCS E C ATETEY P QN G V C T S T A AR A TA T 196
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 493 C ----- ANG V C TQ C T N N YF LYM GGCY S T Q K A PG SFM C KT A GNT G I C TEA A nnryfvv PG ASNTDQSVLA CS NPLG T L T GT 567
Cdd:pfam03302 197 C kassv ANG M C SS C A N G YF RMN GGCY E T T K F PG KSV C EE A NSG G T C QKE A ------- PG YKLNNGDLVT CS PGCK T C T SN 269
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 568 GDTAKAYV G VEGC S QCTAPAAL S DGGMAP A VC T SCDSSKKPNRD G S GCV L C S ---------- V G GC KS C VMDN icge C N S 637
Cdd:pfam03302 270 TVCTTCMD G YVKT S DSCTKCDS S CETCTG A TT T CKTCATGYYKS G T GCV S C T ssesdngitg V K GC LN C APPS ---- N N K 345
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1940870138 638 G FS L DNGKCV S SGA N R SGLS A GAIAGISVAVV A VVGGLVGFLCWWF V CRGKA 689
Cdd:pfam03302 346 G SV L CYLIKD S GST N K SGLS T GAIAGISVAVV I VVGGLVGFLCWWF I CRGKA 397
VSP
pfam03302 Giardia variant-specific surface protein;
83-406
3.25e-08
Giardia variant-specific surface protein;
Pssm-ID: 146106 [Multi-domain]
Cd Length: 397
Bit Score: 56.13
E-value: 3.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 83 C EK C GD GY F L FMGGCYK T TDG P ---- GSEI C TKAEGGL C T EC KTA N G L FK ---- NPAATPEKGSECILCSDINGADGYTG 154
Cdd:pfam03302 1 C DE C KP GY E L SADKTKC T SSA P ckte NCKA C SNDKREV C E EC NSN N Y L TP tsqc IDDCAKIGNYYYTTNANNKKICKECT 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 155 VANC AQ C TKS dsnkga AT C T AC QA G Y YK DFQ ACS K C DGT C L TC ET - S A AQ CT S C PE GK Y L KGDKSCVNNN g C TGNTYADP 233
Cdd:pfam03302 81 VANC KT C EDQ ------ GQ C Q AC ND G F YK SGD ACS P C HES C K TC SG g T A SD CT E C LT GK A L RYGNDGTKGT - C GEGCTTGT 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 234 ES G K C LP C N - TID QACTQC E VDST T KK P KCTN C ggqkm VK TA IDG T T TC VD --- ANG CAT S NVD G SHFL N D G -------- 301
Cdd:pfam03302 154 GA G A C KT C G l TID GTSYCS E CATE T EY P QNGV C ----- TS TA ARA T A TC KA ssv ANG MCS S CAN G YFRM N G G cyettkfp 228
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 302 --------- S TKCILCSDDSES L EANKGTPGCKT CK KNGAKPT C SE C L DGY YNS gngg TVT C EA C GAN C A TCT Q A GN d K C 372
Cdd:pfam03302 229 gksvceean S GGTCQKEAPGYK L NNGDLVTCSPG CK TCTSNTV C TT C M DGY VKT ---- SDS C TK C DSS C E TCT G A TT - T C 303
330 340 350
....*....|....*....|....*....|....*.
gi 1940870138 373 TK C KP G FFMK G N G p TGE C VACDNAQ G -- G ID GC AE C 406
Cdd:pfam03302 304 KT C AT G YYKS G T G - CVS C TSSESDN G it G VK GC LN C 338
VSP
pfam03302 Giardia variant-specific surface protein;
34-227
6.62e-08
Giardia variant-specific surface protein;
Pssm-ID: 146106 [Multi-domain]
Cd Length: 397
Bit Score: 55.36
E-value: 6.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 34 T VGSAEI C T EC K T GG - V P VD G F C rpfg SPQ AA A A GC T KAGGAALDK M tat C EK C GD GYF LFM GGCY K TT DG PG SEI C TK A 112
Cdd:pfam03302 164 T IDGTSY C S EC A T ET e Y P QN G V C ---- TST AA R A TA T CKASSVANG M --- C SS C AN GYF RMN GGCY E TT KF PG KSV C EE A 236
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1940870138 113 EG G l C T EC K T A N G LFK N PAATPEKGSE C IL C SD ingadgytgvancaqctksdsnkg AAT CT A C QA GY Y K DFQA C S KCD G 192
Cdd:pfam03302 237 NS G - G T CQ K E A P G YKL N NGDLVTCSPG C KT C TS ------------------------ NTV CT T C MD GY V K TSDS C T KCD S 291
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1940870138 193 T C L TC ETSAAQ C TS C PE G K Y LK G DK ----- S CVNN NG C TG 227
Cdd:pfam03302 292 S C E TC TGATTT C KT C AT G Y Y KS G TG cvsct S SESD NG I TG 331
FU
smart00261 Furin-like repeats;
353-390
5.30e-03
Furin-like repeats;
Pssm-ID: 214589 [Multi-domain]
Cd Length: 45
Bit Score: 35.18
E-value: 5.30e-03
10 20 30
....*....|....*....|....*....|....*...
gi 1940870138 353 T C EA C GAN CATCT QA G N D K CT K CK P GFF MK G NGPTG EC 390
Cdd:smart00261 3 E C KP C HPE CATCT GP G P D D CT S CK H GFF LD G GKCVS EC 40
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
