|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
641-1348 |
4.53e-25 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 113.61 E-value: 4.53e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 641 EEDLQR---KLEEFEDEKEQLQKMADSA---ATLEQELDQVKLTL------------HQRDLQLESLQQEHLDLMKQFTM 702
Cdd:TIGR02168 185 RENLDRledILNELERQLKSLERQAEKAeryKELKAELRELELALlvlrleelreelEELQEELKEAEEELEELTAELQE 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 703 TQEML-------HTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGE 775
Cdd:TIGR02168 265 LEEKLeelrlevSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEE 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 776 DTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMK 855
Cdd:TIGR02168 345 KLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIE 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 856 ELKRELLQiqVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQVE 935
Cdd:TIGR02168 425 ELLKKLEE--AELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLE 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 936 QMQEEAKKAITEQKQKMKRLG--SDLTSAQKEmkakhkaYENAVSI-LSRRLQESLTAKESAEAELSKLKAQITDGGSNQ 1012
Cdd:TIGR02168 503 GFSEGVKALLKNQSGLSGILGvlSELISVDEG-------YEAAIEAaLGGRLQAVVVENLNAAKKAIAFLKQNELGRVTF 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1013 IAQERIQAleTELQAVRSSKLMLEKELQEVISLTSQELEEYReKVLE-------LEDELQESRGFRRKIKRLEEInKKLA 1085
Cdd:TIGR02168 576 LPLDSIKG--TEIQGNDREILKNIEGFLGVAKDLVKFDPKLR-KALSyllggvlVVDDLDNALELAKKLRPGYRI-VTLD 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1086 LELEHERGKLTGlsqsnAALREHNNVLETA-----LAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKS 1160
Cdd:TIGR02168 652 GDLVRPGGVITG-----GSAKTNSSILERRreieeLEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSR 726
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1161 KVKDLKEQVAAAKADA---AHNRRHYRAAALELNEVKKELHAK----ELLVQALQAEVDKLQVEDEKHSQEVSQFQQELA 1233
Cdd:TIGR02168 727 QISALRKDLARLEAEVeqlEERIAQLSKELTELEAEIEELEERleeaEEELAEAEAEIEELEAQIEQLKEELKALREALD 806
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1234 EARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQKEREIGTLKQQ----------LDMSEQRSHKELEGMQVVLQNIK 1303
Cdd:TIGR02168 807 ELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDieslaaeieeLEELIEELESELEALLNERASLE 886
|
730 740 750 760
....*....|....*....|....*....|....*....|....*
gi 2024459673 1304 TELEVVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQLKMDL 1348
Cdd:TIGR02168 887 EALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRL 931
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
484-1337 |
9.32e-25 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 112.84 E-value: 9.32e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 484 EQYQRLMLKVEDMQKSVLTRDstVHDLRQQLASLQSQLQKVQLERTTLTNKLKASETEITSLQnvrqwyqqqlvlaqEAR 563
Cdd:TIGR02168 213 ERYKELKAELRELELALLVLR--LEELREELEELQEELKEAEEELEELTAELQELEEKLEELR--------------LEV 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 564 VRLQSEMANIQAGQMTQAGVLEHLKLENVALSQQLtetqHRSIKEKERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEED 643
Cdd:TIGR02168 277 SELEEEIEELQKELYALANEISRLEQQKQILRERL----ANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEE 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 644 LQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQEHLDLMKQFTMTQEMLHTKEQTLDDLQTQYDE 723
Cdd:TIGR02168 353 LESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEE 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 724 lkARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLdegtkrlgedtevtSEILEQLRQEMAIRSSQVENLQQ 803
Cdd:TIGR02168 433 --AELKELQAELEELEEELEELQEELERLEEALEELREELEEA--------------EQALDAAERELAQLQARLDSLER 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 804 ENGSLKKQVQKVKEQFLQQKVMveayrrdaSSKDQLISELKATKKRLDSEMKELKRELLQiqvekqsletehsklqKEVT 883
Cdd:TIGR02168 497 LQENLEGFSEGVKALLKNQSGL--------SGILGVLSELISVDEGYEAAIEAALGGRLQ----------------AVVV 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 884 EVHQQMVEIENHLQSVQKERDEM----ETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEqkqkmkRLG--- 956
Cdd:TIGR02168 553 ENLNAAKKAIAFLKQNELGRVTFlpldSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSY------LLGgvl 626
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 957 --SDLTSAQkEMKAKHKAYENAVS----ILSRRlqeSLTAKESAEAELSKLKAQItdggsnqiaqeRIQALETELqavrs 1030
Cdd:TIGR02168 627 vvDDLDNAL-ELAKKLRPGYRIVTldgdLVRPG---GVITGGSAKTNSSILERRR-----------EIEELEEKI----- 686
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1031 sklmleKELQEVISLTSQELEEYREKVLELEDELQESRgfrrkiKRLEEINKKLAlELEHERGKLTGLSQSNAALREHNN 1110
Cdd:TIGR02168 687 ------EELEEKIAELEKALAELRKELEELEEELEQLR------KELEELSRQIS-ALRKDLARLEAEVEQLEERIAQLS 753
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1111 VLETALAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAkadaahnRRHYRAAALEL 1190
Cdd:TIGR02168 754 KELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLL-------NEEAANLRERL 826
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1191 NEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQK 1270
Cdd:TIGR02168 827 ESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELREL 906
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024459673 1271 EREIGTLKQQLDMSEQRSHK---ELEGMQVVLQNIK--------TELEVVREDLSVTQKDKFMLQAKVSELKNSMKSL 1337
Cdd:TIGR02168 907 ESKRSELRRELEELREKLAQlelRLEGLEVRIDNLQerlseeysLTLEEAEALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
643-1215 |
5.59e-24 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 110.03 E-value: 5.59e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 643 DLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQEHLDLmkqftmtqemlhtkEQTLDDLQTQYD 722
Cdd:COG1196 226 EAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEEL--------------ELELEEAQAEEY 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 723 ELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQ 802
Cdd:COG1196 292 ELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 803 QENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEV 882
Cdd:COG1196 372 AELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEE 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 883 TEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAitEQKQKMKRLGSDLTSA 962
Cdd:COG1196 452 AELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAA--LLLAGLRGLAGAVAVL 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 963 QKEMKAKHKAYENA--VSILSRRLQESLTAKESAEAELSKLKAQITDGGSNQIAQERIQALETELQAVrssklmlekelQ 1040
Cdd:COG1196 530 IGVEAAYEAALEAAlaAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAI-----------G 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1041 EVISLTSQELEEYREKVLELEDELQESRGFRRKIKRLEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALAKRE 1120
Cdd:COG1196 599 AAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAE 678
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1121 ADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAK 1200
Cdd:COG1196 679 AELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPE 758
|
570
....*....|....*
gi 2024459673 1201 ELLVQALQAEVDKLQ 1215
Cdd:COG1196 759 PPDLEELERELERLE 773
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
391-1274 |
1.66e-23 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 108.61 E-value: 1.66e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 391 LEGQLEALSAEANQALKEKaELQAQLAALnmklqaqvehsqssqqkqeslssEVATLKQSCWDLERAMADLQNTLEAKNA 470
Cdd:TIGR02168 198 LERQLKSLERQAEKAERYK-ELKAELREL-----------------------ELALLVLRLEELREELEELQEELKEAEE 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 471 SLASSNNDLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQSQLQKVQLERTTLTNKLKASETEITSLQNVRQ 550
Cdd:TIGR02168 254 ELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLD 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 551 WYQQQLVLAQEARVRLQSEMANIQAGQMTQAGVLEHLKLENVALSQQLtETQHRSIKEKERIAAQLQNieadmldqeaaf 630
Cdd:TIGR02168 334 ELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQL-ETLRSKVAQLELQIASLNN------------ 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 631 mQIQEAKTMVeEDLQRKLEEFEDEKEQLQKMADsaatlEQELDQVKLTLHQRDLQLESLQQEHLDLMKQFTMTQEMLHTK 710
Cdd:TIGR02168 401 -EIERLEARL-ERLEDRRERLQQEIEELLKKLE-----EAELKELQAELEELEEELEELQEELERLEEALEELREELEEA 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 711 EQTLDDLQTQYDELKARLeefqsdatskdDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEIleqlrqE 790
Cdd:TIGR02168 474 EQALDAAERELAQLQARL-----------DSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGY------E 536
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 791 MAIRSSQVENLQqengslkkqvQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQS 870
Cdd:TIGR02168 537 AAIEAALGGRLQ----------AVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKD 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 871 LETEHSKLQKEVTEVHQQMVEIENhLQSVQKERDEM--ETRLQSLQFD---KEQMASLAEANQTLKLQveqmqeEAKKAI 945
Cdd:TIGR02168 607 LVKFDPKLRKALSYLLGGVLVVDD-LDNALELAKKLrpGYRIVTLDGDlvrPGGVITGGSAKTNSSIL------ERRREI 679
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 946 TEQKQKMKRLGSDLTSAQKEMKA---KHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQItdggsnQIAQERIQALE 1022
Cdd:TIGR02168 680 EELEEKIEELEEKIAELEKALAElrkELEELEEELEQLRKELEELSRQISALRKDLARLEAEV------EQLEERIAQLS 753
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1023 TELqavrssklmleKELQEVISLTSQELEEYREKVLELEDELQEsrgFRRKIKRLEEINKKLALELEHERGKLTGLSQSN 1102
Cdd:TIGR02168 754 KEL-----------TELEAEIEELEERLEEAEEELAEAEAEIEE---LEAQIEQLKEELKALREALDELRAELTLLNEEA 819
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1103 AALREHNNVLETALAKREADLVQLNLQvqavLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRH 1182
Cdd:TIGR02168 820 ANLRERLESLERRIAATERRLEDLEEQ----IEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSE 895
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1183 YRAAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEarsqlqLLQKKLDDKLSEQPLVSQEVED 1262
Cdd:TIGR02168 896 LEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSE------EYSLTLEEAEALENKIEDDEEE 969
|
890
....*....|..
gi 2024459673 1263 LKWEVEQKEREI 1274
Cdd:TIGR02168 970 ARRRLKRLENKI 981
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
720-1277 |
1.17e-20 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 99.24 E-value: 1.17e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 720 QYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVE 799
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRR 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 800 NLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQ 879
Cdd:COG1196 313 ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 880 KEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDL 959
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 960 TSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQITDGGSNQIAQER--IQALETELQAVrssklmLEK 1037
Cdd:COG1196 473 ALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIgvEAAYEAALEAA------LAA 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1038 ELQEVISLTSQELEEYREkvleledELQESRGFRRKIKRLEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALA 1117
Cdd:COG1196 547 ALQNIVVEDDEVAAAAIE-------YLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLG 619
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1118 KREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKEL 1197
Cdd:COG1196 620 DTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEAL 699
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1198 HAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQKEREIGTL 1277
Cdd:COG1196 700 LAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
378-1081 |
2.65e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 98.21 E-value: 2.65e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 378 HDEMLQVLKEKMRLEGQLEALSAEANQAL-------KEKAELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVATLKQS 450
Cdd:TIGR02168 238 REELEELQEELKEAEEELEELTAELQELEekleelrLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 451 CWDLERAMADLQNTLEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQSQLQKVQLERTT 530
Cdd:TIGR02168 318 LEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIAS 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 531 LTNKLKASETEITSLQ-NVRQWYQQQLVLAQEArvrlqsEMANIQAGQMTQAGVLEHLKlenvalsqQLTETQHRSIKEK 609
Cdd:TIGR02168 398 LNNEIERLEARLERLEdRRERLQQEIEELLKKL------EEAELKELQAELEELEEELE--------ELQEELERLEEAL 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 610 ERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVK------------L 677
Cdd:TIGR02168 464 EELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISvdegyeaaieaaL 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 678 TLHQRDLQLESLQQ--EHLDLMKQFTMTQEML---------HTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQ 746
Cdd:TIGR02168 544 GGRLQAVVVENLNAakKAIAFLKQNELGRVTFlpldsikgtEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLG 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 747 NEKIV--LEVALQTAKASQ----------DQLDEGTKRLGEDTEVTSEILEQlRQEMAIRSSQVENLQQENGSLKKQVQK 814
Cdd:TIGR02168 624 GVLVVddLDNALELAKKLRpgyrivtldgDLVRPGGVITGGSAKTNSSILER-RREIEELEEKIEELEEKIAELEKALAE 702
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 815 VKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIEN 894
Cdd:TIGR02168 703 LRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEA 782
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 895 HLQSVQKERDEMETRLQSL---------------------QFDKE----QMASLAEANQTLKLQVEQMQEE---AKKAIT 946
Cdd:TIGR02168 783 EIEELEAQIEQLKEELKALrealdelraeltllneeaanlRERLEslerRIAATERRLEDLEEQIEELSEDiesLAAEIE 862
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 947 EQKQKMKRLGSDLTSAQKEMKAKhkayENAVSILSRRLQESLTAKESAEAELSKLKAQItdggsnQIAQERIQALETELQ 1026
Cdd:TIGR02168 863 ELEELIEELESELEALLNERASL----EEALALLRSELEELSEELRELESKRSELRREL------EELREKLAQLELRLE 932
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*.
gi 2024459673 1027 AVRSSKLMLEKELQEVISLTSQELEEYREKVLELEDELQES-RGFRRKIKRLEEIN 1081
Cdd:TIGR02168 933 GLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRlKRLENKIKELGPVN 988
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
377-1157 |
5.05e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 97.05 E-value: 5.05e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 377 THDEMLQVLKEKM-RLEGQLEALSAEANQALKEKAELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVATLKQSCWDLE 455
Cdd:TIGR02168 257 ELTAELQELEEKLeELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELA 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 456 RAMADLQNTLEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQSQLQkvqlertTLTNKL 535
Cdd:TIGR02168 337 EELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIE-------RLEARL 409
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 536 KASETEITSLQNVRQWYQQQLVLAQEARVRLQSEmaniqagqmtqagvlehlklENVALSQQLTETQHRSIKEKERIAAQ 615
Cdd:TIGR02168 410 ERLEDRRERLQQEIEELLKKLEEAELKELQAELE--------------------ELEEELEELQEELERLEEALEELREE 469
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 616 LQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVK------------LTLHQRD 683
Cdd:TIGR02168 470 LEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISvdegyeaaieaaLGGRLQA 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 684 LQLESLQQ--EHLDLMKQFTMTQEML---------HTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIV- 751
Cdd:TIGR02168 550 VVVENLNAakKAIAFLKQNELGRVTFlpldsikgtEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVd 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 752 -LEVALQTAKASQ----------DQLDEGTKRLGEDTEVTSEILEQlRQEMAIRSSQVENLQQENGSLKKQVQKVKEQFL 820
Cdd:TIGR02168 630 dLDNALELAKKLRpgyrivtldgDLVRPGGVITGGSAKTNSSILER-RREIEELEEKIEELEEKIAELEKALAELRKELE 708
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 821 QQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQ 900
Cdd:TIGR02168 709 ELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELE 788
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 901 KERDEMETRLQSLqfdkeqmaslaeanqtlklqvEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKhkayenavsil 980
Cdd:TIGR02168 789 AQIEQLKEELKAL---------------------REALDELRAELTLLNEEAANLRERLESLERRIAAT----------- 836
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 981 SRRLQESLTAKESAEAELSKLKAQITDGgsnQIAQERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLEL 1060
Cdd:TIGR02168 837 ERRLEDLEEQIEELSEDIESLAAEIEEL---EELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSEL 913
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1061 EDELQESRGfrrKIKRLEEINKKLALELEHERGKLTGLSQSNA-ALREHNNVLETALAKREADLVQLNLQV--------- 1130
Cdd:TIGR02168 914 RRELEELRE---KLAQLELRLEGLEVRIDNLQERLSEEYSLTLeEAEALENKIEDDEEEARRRLKRLENKIkelgpvnla 990
|
810 820 830
....*....|....*....|....*....|..
gi 2024459673 1131 -----QAVLKRKEEEDQQMQQLIQALqASLEK 1157
Cdd:TIGR02168 991 aieeyEELKERYDFLTAQKEDLTEAK-ETLEE 1021
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
391-956 |
4.96e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 93.85 E-value: 4.96e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 391 LEGQLEALSAEANQALK------------------EKAELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVATLKQscw 452
Cdd:COG1196 198 LERQLEPLERQAEKAERyrelkeelkeleaellllKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRL--- 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 453 dlerAMADLQNTLEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQSQLQKVQLERTTLT 532
Cdd:COG1196 275 ----ELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAE 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 533 NKLKASETEITSLQNVRQWYQQQLVLAQEARVRLQSEMANIQAGQmtqagvlehlkLENVALSQQLTETQHRSIKEKERI 612
Cdd:COG1196 351 EELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAA-----------AELAAQLEELEEAEEALLERLERL 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 613 AAQLQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQE 692
Cdd:COG1196 420 EEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEA 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 693 HLDLMKQFTMTQEMLHTKEQ-----TLDDLQTQYDELKARLEE---------FQSDATSKDDMIQYLQNEKIVLEVALQT 758
Cdd:COG1196 500 EADYEGFLEGVKAALLLAGLrglagAVAVLIGVEAAYEAALEAalaaalqniVVEDDEVAAAAIEYLKAAKAGRATFLPL 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 759 AKASQDQLDEGTKRLG----------EDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEA 828
Cdd:COG1196 580 DKIRARAALAAALARGaigaavdlvaSDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAG 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 829 YRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKevtEVHQQMVEIENHLQSVQKERDEMET 908
Cdd:COG1196 660 GSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAE---AEEERLEEELEEEALEEQLEAEREE 736
|
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 2024459673 909 RLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAiteqKQKMKRLG 956
Cdd:COG1196 737 LLEELLEEEELLEEEALEELPEPPDLEELERELERL----EREIEALG 780
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
507-1092 |
1.07e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 89.61 E-value: 1.07e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 507 VHDLRQQLASLQSQlQKVQLERTTLTNKLKASETEITSLQnvRQWYQQQLVLAQEARVRLQSEMANIQAGQMTQAGVLEH 586
Cdd:COG1196 195 LGELERQLEPLERQ-AEKAERYRELKEELKELEAELLLLK--LRELEAELEELEAELEELEAELEELEAELAELEAELEE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 587 LKLENVALSQQLTETQHRSIKEKERIAAqlqnieadmldqeaafmqiqeaktmVEEDLQRKLEEFEDEKEQLQKMADSAA 666
Cdd:COG1196 272 LRLELEELELELEEAQAEEYELLAELAR-------------------------LEQDIARLEERRRELEERLEELEEELA 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 667 TLEQELDQVKLTLHQRDLQLESLQQEHLDLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQ 746
Cdd:COG1196 327 ELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELE 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 747 NEKIVLEVALQTAKASQDQLDEgtkrlgEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQFLQQkvmv 826
Cdd:COG1196 407 EAEEALLERLERLEEELEELEE------ALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLE---- 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 827 EAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEM 906
Cdd:COG1196 477 AALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDD 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 907 ETRLQSLQFDKEQMASLAEAnqtlkLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQE 986
Cdd:COG1196 557 EVAAAAIEYLKAAKAGRATF-----LPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAAR 631
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 987 SLTAKESAEAELSKLKAQITDGGSNQIAQERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLELEDELQE 1066
Cdd:COG1196 632 LEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAE 711
|
570 580
....*....|....*....|....*.
gi 2024459673 1067 SRGFRRKIKRLEEINKKLALELEHER 1092
Cdd:COG1196 712 AEEERLEEELEEEALEEQLEAEREEL 737
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
806-1419 |
1.34e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 89.23 E-value: 1.34e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 806 GSLKKQVQKVKE-QFLQQkvmvEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTE 884
Cdd:COG1196 203 EPLERQAEKAERyRELKE----ELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEE 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 885 VHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQK 964
Cdd:COG1196 279 LELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEA 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 965 EMKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQITDggsNQIAQERIQALETELQAVRSSKLMLEKELQEVIS 1044
Cdd:COG1196 359 ELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQ---LEELEEAEEALLERLERLEEELEELEEALAELEE 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1045 LTSQELEEYREKVLELEDELQESRGFRRKIKRLEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALA--KREAD 1122
Cdd:COG1196 436 EEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEgvKAALL 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1123 LVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKekskVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKK-ELHAKE 1201
Cdd:COG1196 516 LAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQN----IVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRArAALAAA 591
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1202 LLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLddklseqplvsQEVEDLKWEVEQKEREIGTLKQQL 1281
Cdd:COG1196 592 LARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAAL-----------RRAVTLAGRLREVTLEGEGGSAGG 660
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1282 DMSEQRSHKELEGMQVVLQNIKTELEVVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQLKMDLKHGKMKKRKGENn 1361
Cdd:COG1196 661 SLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLE- 739
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 2024459673 1362 ssnpvtpvkipdcpvpaALLEELLKPSTAVSKEPLKNLNscLRQLKQEMDSLQRQMEE 1419
Cdd:COG1196 740 -----------------ELLEEEELLEEEALEELPEPPD--LEELERELERLEREIEA 778
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
727-1335 |
1.12e-16 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 85.89 E-value: 1.12e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 727 RLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQemaiRSSQVENLQQEng 806
Cdd:PRK03918 156 GLDDYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPE----LREELEKLEKE-- 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 807 slKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQvEKQSLETEHSKLQKEVTEVH 886
Cdd:PRK03918 230 --VKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELK-ELKEKAEEYIKLSEFYEEYL 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 887 QQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAkKAITEQKQKMKRLgsdltsaqKEM 966
Cdd:PRK03918 307 DELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERH-ELYEEAKAKKEEL--------ERL 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 967 KAKHKAYEnaVSILSRRLQESLTAKESAEAELSKLKAQItdGGSNQIAQERIQALEtELQAVRSS------------KLM 1034
Cdd:PRK03918 378 KKRLTGLT--PEKLEKELEELEKAKEEIEEEISKITARI--GELKKEIKELKKAIE-ELKKAKGKcpvcgrelteehRKE 452
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1035 LEKELQEVISLTSQELEEYREKVLELEDELQESRGFRRKIKRLEEiNKKLALELEHERGKLTG--LSQSNAALREHNNVL 1112
Cdd:PRK03918 453 LLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIK-LKELAEQLKELEEKLKKynLEELEKKAEEYEKLK 531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1113 ETaLAKREADLVQLNLQvqavLKRKEEEDQQMQQLIQALQaSLEKEKSKVKDLKEQVAAAKADAAHNR----RHYRAAAL 1188
Cdd:PRK03918 532 EK-LIKLKGEIKSLKKE----LEKLEELKKKLAELEKKLD-ELEEELAELLKELEELGFESVEELEERlkelEPFYNEYL 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1189 ELNEVKKELhakellvQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQplVSQEVEDLKWEVE 1268
Cdd:PRK03918 606 ELKDAEKEL-------EREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEE--LREEYLELSRELA 676
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024459673 1269 QKEREIGTLKQQLDMSEqRSHKELEGMQVVLQNIKTELEVVREDLSVTQKdkfmLQAKVSELKNSMK 1335
Cdd:PRK03918 677 GLRAELEELEKRREEIK-KTLEKLKEELEEREKAKKELEKLEKALERVEE----LREKVKKYKALLK 738
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
510-1160 |
2.33e-15 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 82.09 E-value: 2.33e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 510 LRQQLASLQSQLQKVQLERTTLTNKLKASETEITSLQNVRQWYQQQLVLAQEARVRLQSEM--------ANIQAGQMTQA 581
Cdd:pfam15921 262 LQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLestvsqlrSELREAKRMYE 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 582 GVLEHLKLENVALSQQLTETQhrsikekeriaaqlqnIEADMLDQEAAFMQIQEAKTMVeeDLQRKLEEFEDEKEQLQKM 661
Cdd:pfam15921 342 DKIEELEKQLVLANSELTEAR----------------TERDQFSQESGNLDDQLQKLLA--DLHKREKELSLEKEQNKRL 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 662 ADSAATLEQELDQVKLTLHQRDLQLESLQQehldLMKqfTMTQEMLHTKEQTLDDLQTQYDELKaRLEEFQSDATSKDDM 741
Cdd:pfam15921 404 WDRDTGNSITIDHLRRELDDRNMEVQRLEA----LLK--AMKSECQGQMERQMAAIQGKNESLE-KVSSLTAQLESTKEM 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 742 IQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKK---QVQKVKEQ 818
Cdd:pfam15921 477 LRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNvqtECEALKLQ 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 819 FLQQKVMVEAYRRDASSKDQLISE-------LKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVE 891
Cdd:pfam15921 557 MAEKDKVIEILRQQIENMTQLVGQhgrtagaMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVK 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 892 IEN----HLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMK 967
Cdd:pfam15921 637 LVNagseRLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLK 716
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 968 AKHKAYENAVSIlSRRLQESLTAK----ESAEAELSKLKAQITDGGSNQ-IAQERIQALETELQAVRSSKLMLEKELQev 1042
Cdd:pfam15921 717 SMEGSDGHAMKV-AMGMQKQITAKrgqiDALQSKIQFLEEAMTNANKEKhFLKEEKNKLSQELSTVATEKNKMAGELE-- 793
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1043 iSLTSQElEEYREKVLELEDELQESR----GFRRKIKRLEEINKKLALELEHERGKLTG------------LSQSNAALR 1106
Cdd:pfam15921 794 -VLRSQE-RRLKEKVANMEVALDKASlqfaECQDIIQRQEQESVRLKLQHTLDVKELQGpgytsnssmkprLLQPASFTR 871
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 2024459673 1107 EHNNVLETalakrEADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKS 1160
Cdd:pfam15921 872 THSNVPSS-----QSTASFLSHHSRKTNALKEDPTRDLKQLLQELRSVINEEPT 920
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
719-1438 |
2.61e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 81.64 E-value: 2.61e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 719 TQYDELKARLEEFQSDATSKDdmIQYLQNEkivLEVALQTAKASQDQLDEGTKRLgedtEVTSEILEQLRQEMAIRSSQV 798
Cdd:TIGR02168 213 ERYKELKAELRELELALLVLR--LEELREE---LEELQEELKEAEEELEELTAEL----QELEEKLEELRLEVSELEEEI 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 799 ENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKL 878
Cdd:TIGR02168 284 EELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEEL 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 879 QKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEA-NQTLKLQVEQMQEEAKKAITEQKQKMKRLGS 957
Cdd:TIGR02168 364 EAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERlEDRRERLQQEIEELLKKLEEAELKELQAELE 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 958 DLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQITdggSNQIAQERIQALETELQAVRSSKLMLEK 1037
Cdd:TIGR02168 444 ELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLD---SLERLQENLEGFSEGVKALLKNQSGLSG 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1038 ELQEVISLTSQElEEYRekvLELEDELQESRGFRrKIKRLEEINKKLALELEHERGKLTGLsqsnaalrEHNNVLETALA 1117
Cdd:TIGR02168 521 ILGVLSELISVD-EGYE---AAIEAALGGRLQAV-VVENLNAAKKAIAFLKQNELGRVTFL--------PLDSIKGTEIQ 587
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1118 KREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLekekSKVKDLKEQVAAAKAdaahNRRHYRAAALELNEVKKE- 1196
Cdd:TIGR02168 588 GNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGV----LVVDDLDNALELAKK----LRPGYRIVTLDGDLVRPGg 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1197 -----LHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQKE 1271
Cdd:TIGR02168 660 vitggSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLE 739
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1272 REIGTLKQQLDmseqRSHKELEGMQVVLQNIKTELEVVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQLKMDLKhg 1351
Cdd:TIGR02168 740 AEVEQLEERIA----QLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELT-- 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1352 kmkkrkgennssnpvtpvkipdcpvpaalleellkpstavskeplkNLNSCLRQLKQEMDSLQRQMEEHTITVHESMSSW 1431
Cdd:TIGR02168 814 ----------------------------------------------LLNEEAANLRERLESLERRIAATERRLEDLEEQI 847
|
....*..
gi 2024459673 1432 TQIEEQL 1438
Cdd:TIGR02168 848 EELSEDI 854
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
649-1361 |
4.99e-15 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 80.88 E-value: 4.99e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 649 EEFEDEKEqlqKMADSAATLEQELDQVKLTLHQRDLQLESLQQEHLDLMKqFTMTQEMLHTKEQTLddLQTQYDELKARL 728
Cdd:TIGR02169 166 AEFDRKKE---KALEELEEVEENIERLDLIIDEKRQQLERLRREREKAER-YQALLKEKREYEGYE--LLKEKEALERQK 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 729 EEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVtseileQLRQEMAIRSSQVENLQQENGSL 808
Cdd:TIGR02169 240 EAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQL------RVKEKIGELEAEIASLERSIAEK 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 809 KKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQ 888
Cdd:TIGR02169 314 ERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREK 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 889 MVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKA 968
Cdd:TIGR02169 394 LEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYD 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 969 KHKAYenavsilsRRLQESLTAKESaeaELSKLKAQItdggsnqiaqeriQALETELQAVRSSKLMLEKELQEVISLTSQ 1048
Cdd:TIGR02169 474 LKEEY--------DRVEKELSKLQR---ELAEAEAQA-------------RASEERVRGGRAVEEVLKASIQGVHGTVAQ 529
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1049 eLEEYREK----------------VLELEDELQESRGF--RRKIKRLE--EINKKLALELEHERGKLTGLSQSNAALREH 1108
Cdd:TIGR02169 530 -LGSVGERyataievaagnrlnnvVVEDDAVAKEAIELlkRRKAGRATflPLNKMRDERRDLSILSEDGVIGFAVDLVEF 608
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1109 NNVLETA---------------LAKR----------EADLVQ----------LNLQVQAVLKRKEEEDQQMQQLIQALQA 1153
Cdd:TIGR02169 609 DPKYEPAfkyvfgdtlvvedieAARRlmgkyrmvtlEGELFEksgamtggsrAPRGGILFSRSEPAELQRLRERLEGLKR 688
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1154 SLEKEKSKVKDLKeqvaaakadaahnrRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELA 1233
Cdd:TIGR02169 689 ELSSLQSELRRIE--------------NRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIE 754
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1234 EARSQLQLLQKKLD-----------------DKLSEQPLvsQEVEDLKWEVEQKEREIGTLKQQLDMSEQRSH------- 1289
Cdd:TIGR02169 755 NVKSELKELEARIEeleedlhkleealndleARLSHSRI--PEIQAELSKLEEEVSRIEARLREIEQKLNRLTlekeyle 832
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024459673 1290 KELEGMQVVLQNIKTELEVVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQLKMDLKHGKMKKRKGENN 1361
Cdd:TIGR02169 833 KEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERK 904
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
337-941 |
6.09e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.49 E-value: 6.09e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 337 EVLQAAAVEHQAQGQEFNGEIRSRRDSISSSVSMESSVAGTHDEMLQVLKEKMRLEGQLEALSAEANqalKEKAELQAQL 416
Cdd:TIGR02168 284 EELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELK---EELESLEAEL 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 417 AALNMKLQAQVEHSQSSQQKQESLSSEVATLKQScwdLERAMADLQNTLEAKNASLASSNNDLQLAEEQYQRLM-LKVED 495
Cdd:TIGR02168 361 EELEAELEELESRLEELEEQLETLRSKVAQLELQ---IASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEeAELKE 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 496 MQKSVLTRDSTVHDLRQQLASLQSQLQKVQLERTTLTNKLKASETEITSLQNvRQWYQQQLVLAQEARVRLQSEMANIQA 575
Cdd:TIGR02168 438 LQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQA-RLDSLERLQENLEGFSEGVKALLKNQS 516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 576 GQMTQAGVL-EHLKLEN---VALSQQLTETQHRSIKEKERIAAQLQNIEADMLDQEAAFM--------QIQEAKT---MV 640
Cdd:TIGR02168 517 GLSGILGVLsELISVDEgyeAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLpldsikgtEIQGNDReilKN 596
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 641 EEDLQRKLEEFEDEKEQLQKMADS-------AATLEQELDQVKLTLH-----------------------QRDLQLESLQ 690
Cdd:TIGR02168 597 IEGFLGVAKDLVKFDPKLRKALSYllggvlvVDDLDNALELAKKLRPgyrivtldgdlvrpggvitggsaKTNSSILERR 676
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 691 QEHLDLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGT 770
Cdd:TIGR02168 677 REIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKEL 756
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 771 KRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQ--------------ENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSK 836
Cdd:TIGR02168 757 TELEAEIEELEERLEEAEEELAEAEAEIEELEAqieqlkeelkalreALDELRAELTLLNEEAANLRERLESLERRIAAT 836
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 837 DQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRL----QS 912
Cdd:TIGR02168 837 ERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRselrRE 916
|
650 660
....*....|....*....|....*....
gi 2024459673 913 LQFDKEQMASLAEANQTLKLQVEQMQEEA 941
Cdd:TIGR02168 917 LEELREKLAQLELRLEGLEVRIDNLQERL 945
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
337-944 |
6.75e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 76.90 E-value: 6.75e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 337 EVLQAAAVEHQAQGQEFNGEIRSRRDSISSSVSMESSVAGTHDEMLQVLKEKMRLEGQLEALSAEANQALKEKAELQAQL 416
Cdd:COG1196 246 AELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEEL 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 417 AALNMKLQAQVEHSQSSQQKQESLSSEVATLKQSCWDLERAMADLQNTLEAKNASLASSNNDLQLAEEQYQRLMLKVEDM 496
Cdd:COG1196 326 AELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEEL 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 497 QKSVLTRDSTVHDLRQQLASLQSQLQKVQLERTTLTNKLKASETEITSLQNVRQwyQQQLVLAQEARVRLQSEMANIQAG 576
Cdd:COG1196 406 EEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEE--ALLELLAELLEEAALLEAALAELL 483
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 577 QMTQAGVLEHLKLENVALSQQLTETQHRSIKEKERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKE 656
Cdd:COG1196 484 EELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAI 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 657 QLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQEHLDLmkqftmtqemlhtkeqtLDDLQTQYDELKARLEEFQSDAT 736
Cdd:COG1196 564 EYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDL-----------------VASDLREADARYYVLGDTLLGRT 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 737 SKDDmiqYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVK 816
Cdd:COG1196 627 LVAA---RLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEE 703
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 817 EQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIEN-H 895
Cdd:COG1196 704 EEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGPvN 783
|
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 2024459673 896 LQSVQkERDEMETRLQSLqfdKEQMASLAEANQTLKLQVEQMQEEAKKA 944
Cdd:COG1196 784 LLAIE-EYEELEERYDFL---SEQREDLEEARETLEEAIEEIDRETRER 828
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
386-1264 |
1.24e-13 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 76.37 E-value: 1.24e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 386 KEKMRLEGQLEALSAEANQALKEKAELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVATLKQSCWDLERAMADLQNTL 465
Cdd:pfam01576 201 KGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDL 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 466 EAKNASLASSNNDLQLAEEQYQRLMLKVEDmqksvlTRDSTVhdLRQQLASLQSqlQKVQLERTTLTNKLKASETEitsL 545
Cdd:pfam01576 281 ESERAARNKAEKQRRDLGEELEALKTELED------TLDTTA--AQQELRSKRE--QEVTELKKALEEETRSHEAQ---L 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 546 QNVRQWYQQQLVLAQEARVRLQSEMANIQAGQMTQAGVLEHLKLENVALSQQLTETQHRsikeKERIAAQLQNIEADMLD 625
Cdd:pfam01576 348 QEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHK----RKKLEGQLQELQARLSE 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 626 QEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQ-------LESLQQEHLDLMK 698
Cdd:pfam01576 424 SERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQklnlstrLRQLEDERNSLQE 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 699 QFTMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTE 778
Cdd:pfam01576 504 QLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELD 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 779 VTSEILEQLRQEMairsSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRD----ASSKDQLISELKATKKRLDSEM 854
Cdd:pfam01576 584 DLLVDLDHQRQLV----SNLEKKQKKFDQMLAEEKAISARYAEERDRAEAEAREketrALSLARALEEALEAKEELERTN 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 855 KELKRELLQI-----QVEKQSLETEHSK--LQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSL--QFDKEQMASLAE 925
Cdd:pfam01576 660 KQLRAEMEDLvsskdDVGKNVHELERSKraLEQQVEEMKTQLEELEDELQATEDAKLRLEVNMQALkaQFERDLQARDEQ 739
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 926 ANQTLKLQVEQMQEEAKKAITEQKQKM------KRLGSDLTSAQKEMKAKHKAYENAVSILsRRLQESLT--AKESAEAE 997
Cdd:pfam01576 740 GEEKRRQLVKQVRELEAELEDERKQRAqavaakKKLELDLKELEAQIDAANKGREEAVKQL-KKLQAQMKdlQRELEEAR 818
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 998 LSKLKAQITDGGSnqiaQERIQALETELqavrsskLMLEKELQEVISLTSQELEEYREKVLELEDELQESRGFRRKIKRL 1077
Cdd:pfam01576 819 ASRDEILAQSKES----EKKLKNLEAEL-------LQLQEDLAASERARRQAQQERDELADEIASGASGKSALQDEKRRL 887
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1078 EEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALA-------KREADLVQLNLQVQAVLKRKEEEDQQMQQLIQA 1150
Cdd:pfam01576 888 EARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAaerstsqKSESARQQLERQNKELKAKLQEMEGTVKSKFKS 967
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1151 LQASLEkekSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQ 1230
Cdd:pfam01576 968 SIAALE---AKIAQLEEQLEQESRERQAANKLVRRTEKKLKEVLLQVEDERRHADQYKDQAEKGNSRMKQLKRQLEEAEE 1044
|
890 900 910
....*....|....*....|....*....|....
gi 2024459673 1231 ELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLK 1264
Cdd:pfam01576 1045 EASRANAARRKLQRELDDATESNESMNREVSTLK 1078
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
492-1254 |
1.58e-13 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 75.93 E-value: 1.58e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 492 KVEDMQKSvLTRDSTVHD-----LRQQLASLQSQLQKVQLERTTLTN----KLKASETEITSLQNVRQWYQQQLVLAQEA 562
Cdd:pfam15921 86 QVKDLQRR-LNESNELHEkqkfyLRQSVIDLQTKLQEMQMERDAMADirrrESQSQEDLRNQLQNTVHELEAAKCLKEDM 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 563 RVRLQSEMANIQAGQMTQAGVLEHLKLENV----ALSQQLTETQHRSIKEKERIAAQLQNIEADmLDQEAAFM------- 631
Cdd:pfam15921 165 LEDSNTQIEQLRKMMLSHEGVLQEIRSILVdfeeASGKKIYEHDSMSTMHFRSLGSAISKILRE-LDTEISYLkgrifpv 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 632 --QIQEAKTMVEEDLQRKLEEFEDEKEQLQKmadsaatlEQELDQVKLTLHQRDLQLESLQ-QEHLDLMKQFTMTQEMLH 708
Cdd:pfam15921 244 edQLEALKSESQNKIELLLQQHQDRIEQLIS--------EHEVEITGLTEKASSARSQANSiQSQLEIIQEQARNQNSMY 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 709 TKEqtLDDLQTQYDELKARLEEFQSdatSKDDMIQYLQNEKIVLEVALQTAKASQDQLD--------------------- 767
Cdd:pfam15921 316 MRQ--LSDLESTVSQLRSELREAKR---MYEDKIEELEKQLVLANSELTEARTERDQFSqesgnlddqlqklladlhkre 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 768 -------EGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKvkeQFLQQKVMVEAYRRDASSKDQLI 840
Cdd:pfam15921 391 kelslekEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQG---QMERQMAAIQGKNESLEKVSSLT 467
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 841 SELKATKKRLDSEMKELkrellqiQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQM 920
Cdd:pfam15921 468 AQLESTKEMLRKVVEEL-------TAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEG 540
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 921 ASLAEANQTLKLQVEQMQEEAK--KAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAEL 998
Cdd:pfam15921 541 DHLRNVQTECEALKLQMAEKDKviEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKI 620
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 999 SKLKAQITDGGSNQIaqERIQALETELQAVRSSKLMLEKELQEVISlTSQELEEYREKVLELEdelqesRGFRRKIKRLE 1078
Cdd:pfam15921 621 RELEARVSDLELEKV--KLVNAGSERLRAVKDIKQERDQLLNEVKT-SRNELNSLSEDYEVLK------RNFRNKSEEME 691
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1079 EINKKLALELEHERGKLTglsqsnaalREHNNVLETALAKREADLVQLNLQVQAVLKRKEEEDQQMQ-QLIQALQASLEK 1157
Cdd:pfam15921 692 TTTNKLKMQLKSAQSELE---------QTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKiQFLEEAMTNANK 762
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1158 EKSKVKDLKEQVAaakadaahnrRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQ--ELAEA 1235
Cdd:pfam15921 763 EKHFLKEEKNKLS----------QELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDiiQRQEQ 832
|
810
....*....|....*....
gi 2024459673 1236 RSQLQLLQKKLDDKLSEQP 1254
Cdd:pfam15921 833 ESVRLKLQHTLDVKELQGP 851
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
484-1287 |
1.67e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 75.87 E-value: 1.67e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 484 EQYQRLMLKVEDMQKSVLTRDstVHDLRQQLASLQSQLQKVQLERTTLTNKLKASETEITSLQNVRQWYQQQLV-LAQEA 562
Cdd:TIGR02169 211 ERYQALLKEKREYEGYELLKE--KEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKdLGEEE 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 563 RVRLQSEMANIQAGQMTQAGVLEHLKLEnvalSQQLTETQHRSIKEKERIAAQLQNIEADMLDQeaafmqiQEAKTMVEE 642
Cdd:TIGR02169 289 QLRVKEKIGELEAEIASLERSIAEKERE----LEDAEERLAKLEAEIDKLLAEIEELEREIEEE-------RKRRDKLTE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 643 DLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLtlhqrdlQLESLQQEHLDLMKQFTMTQEMLHTKEQTLDDLQTQYD 722
Cdd:TIGR02169 358 EYAELKEELEDLRAELEEVDKEFAETRDELKDYRE-------KLEKLKREINELKRELDRLQEELQRLSEELADLNAAIA 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 723 ELKARLEEFQSDATSKDdmiqylqnekivLEVALQTAKASQdqldegtkrlgedtevTSEILEQLRQEMAIRSSQVENLQ 802
Cdd:TIGR02169 431 GIEAKINELEEEKEDKA------------LEIKKQEWKLEQ----------------LAADLSKYEQELYDLKEEYDRVE 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 803 QENGSLKKQvqkvkeqflqqkvmveayrrdasskdqlISELKATKKRLDSEMKELKRellQIQVEKQSLETEHSKLQK-- 880
Cdd:TIGR02169 483 KELSKLQRE----------------------------LAEAEAQARASEERVRGGRA---VEEVLKASIQGVHGTVAQlg 531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 881 EVTEVHQQMVEIE--NHLQSVQKERDEMEtrlqslqfdkeqmaslAEANQTLKlqveqmQEEAKKAITEQKQKMKRLGSD 958
Cdd:TIGR02169 532 SVGERYATAIEVAagNRLNNVVVEDDAVA----------------KEAIELLK------RRKAGRATFLPLNKMRDERRD 589
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 959 LtSAQKEMKAKHKA---------YENAVSILSRR--LQESL-TAKE--------SAEAELSKLKAQITdGGSN--QIAQE 1016
Cdd:TIGR02169 590 L-SILSEDGVIGFAvdlvefdpkYEPAFKYVFGDtlVVEDIeAARRlmgkyrmvTLEGELFEKSGAMT-GGSRapRGGIL 667
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1017 RIQALETELQAVRSSKLMLEKELQEVIsltsQELEEYREKVLELEDELQE-SRGFRRKIKRLEEINK---KLALELEHER 1092
Cdd:TIGR02169 668 FSRSEPAELQRLRERLEGLKRELSSLQ----SELRRIENRLDELSQELSDaSRKIGEIEKEIEQLEQeeeKLKERLEELE 743
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1093 GKLTGLSQSNAALREHNNVLETALAKREADLVQLNLQVQAVlkrkeeEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAA 1172
Cdd:TIGR02169 744 EDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDL------EARLSHSRIPEIQAELSKLEEEVSRIEARLREI 817
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1173 KADAahNRRHYRAAALE--LNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKL 1250
Cdd:TIGR02169 818 EQKL--NRLTLEKEYLEkeIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELE 895
|
810 820 830
....*....|....*....|....*....|....*..
gi 2024459673 1251 SEQPLVSQEVEDLKWEVEQKEREIGTLKQQLDMSEQR 1287
Cdd:TIGR02169 896 AQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEE 932
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
385-1083 |
1.72e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 75.87 E-value: 1.72e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 385 LKEKMRLEGQLEALSAEANQALKEKAELQAQLAALNMKL-QAQVEHSQSSQQKQESLSSEVATLKQSCWDLERAMADLQN 463
Cdd:TIGR02169 229 LKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLeEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLER 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 464 TLEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSV----LTRDS---TVHDLRQQLASLQSQLQKVQLERTTLTNKLK 536
Cdd:TIGR02169 309 SIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIeeerKRRDKlteEYAELKEELEDLRAELEEVDKEFAETRDELK 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 537 ASETEITSLQNVRQWYQQQLVLAQEARVRLQSEMANIQAGqmtqagvLEHLKLENVALSQQLTETQHRsIKEKERiaaQL 616
Cdd:TIGR02169 389 DYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAA-------IAGIEAKINELEEEKEDKALE-IKKQEW---KL 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 617 QNIEADMLDQEAAFMQIQEAKTMVEE---DLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQEH 693
Cdd:TIGR02169 458 EQLAADLSKYEQELYDLKEEYDRVEKelsKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERY 537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 694 ------------------------------------------LDLMKQFTMTQEMLHTKEQT-----LDDLQTQYDELKA 726
Cdd:TIGR02169 538 ataievaagnrlnnvvveddavakeaiellkrrkagratflpLNKMRDERRDLSILSEDGVIgfavdLVEFDPKYEPAFK 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 727 RLEE----FQSDATSKDDMIQY----LQNEkiVLE---------VALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQ 789
Cdd:TIGR02169 618 YVFGdtlvVEDIEAARRLMGKYrmvtLEGE--LFEksgamtggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQS 695
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 790 EMAIR-------SSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELL 862
Cdd:TIGR02169 696 ELRRIenrldelSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLH 775
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 863 -------------------QIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLqfdKEQMASL 923
Cdd:TIGR02169 776 kleealndlearlshsripEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDL---KEQIKSI 852
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 924 AEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGsDLTSAQKEMKAKHKAYEN-------AVSILSRRLQESLTAKESAEA 996
Cdd:TIGR02169 853 EKEIENLNGKKEELEEELEELEAALRDLESRLG-DLKKERDELEAQLRELERkieeleaQIEKKRKRLSELKAKLEALEE 931
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 997 ELSKLKAQITDGGSNQIA-------QERIQALETELQAVRSSKLMLEKELQEVIsLTSQELEEYREKVLELEDELQEsrg 1069
Cdd:TIGR02169 932 ELSEIEDPKGEDEEIPEEelsledvQAELQRVEEEIRALEPVNMLAIQEYEEVL-KRLDELKEKRAKLEEERKAILE--- 1007
|
810
....*....|....
gi 2024459673 1070 frrkikRLEEINKK 1083
Cdd:TIGR02169 1008 ------RIEEYEKK 1015
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
711-1364 |
2.21e-13 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 75.06 E-value: 2.21e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 711 EQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEvalQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRqe 790
Cdd:TIGR04523 39 EKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILE---QQIKDLNDKLKKNKDKINKLNSDLSKINSEIK-- 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 791 maIRSSQVENLQQENGSLKKQVQKVKEQflQQKVMVEayrrdasskdqlISELKATKKRLDSEMKELKRELLQIQVEKQS 870
Cdd:TIGR04523 114 --NDKEQKNKLEVELNKLEKQKKENKKN--IDKFLTE------------IKKKEKELEKLNNKYNDLKKQKEELENELNL 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 871 LETEHSKLQKEVTEVHQQMVeIENHLQSVQKERDEMETRLQSlqfdkeQMASLAEANQTLKLQVEQMQEE---AKKAITE 947
Cdd:TIGR04523 178 LEKEKLNIQKNIDKIKNKLL-KLELLLSNLKKKIQKNKSLES------QISELKKQNNQLKDNIEKKQQEineKTTEISN 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 948 QKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSrrlqesltakeSAEAELSKLKAQITDGgSNQIAQERIQALETELQA 1027
Cdd:TIGR04523 251 TQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIK-----------ELEKQLNQLKSEISDL-NNQKEQDWNKELKSELKN 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1028 VRSSKLMLEKElqevISLTSQELEEYREKVLELEDELQESRGFRRKIKR-LEEINKKLALELEHERGKLtglsQSNAALR 1106
Cdd:TIGR04523 319 QEKKLEEIQNQ----ISQNNKIISQLNEQISQLKKELTNSESENSEKQReLEEKQNEIEKLKKENQSYK----QEIKNLE 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1107 EHNNVLETALAKREadlvQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKadaahnrrhyraa 1186
Cdd:TIGR04523 391 SQINDLESKIQNQE----KLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKE------------- 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1187 aLELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWE 1266
Cdd:TIGR04523 454 -LIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESE 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1267 VEQKEREIGTLKQQLDMSEQRSHKELegMQVVLQNIKTELEVVRED---LSVTQKDKFML----QAKVSELKNSMKSLLQ 1339
Cdd:TIGR04523 533 KKEKESKISDLEDELNKDDFELKKEN--LEKEIDEKNKEIEELKQTqksLKKKQEEKQELidqkEKEKKDLIKEIEEKEK 610
|
650 660
....*....|....*....|....*
gi 2024459673 1340 QNQQLKMDLKHGKMKKRKGENNSSN 1364
Cdd:TIGR04523 611 KISSLEKELEKAKKENEKLSSIIKN 635
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
607-1322 |
3.64e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 74.72 E-value: 3.64e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 607 KEKERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMA-DSAATLEQELDQVKLTLHQRDLQ 685
Cdd:TIGR02169 230 KEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGeEEQLRVKEKIGELEAEIASLERS 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 686 LESLQQEHLDLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQ 765
Cdd:TIGR02169 310 IAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKD 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 766 LDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEqflqqkvmveayrrDASSKDQLISELKA 845
Cdd:TIGR02169 390 YREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEE--------------EKEDKALEIKKQEW 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 846 TKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAE 925
Cdd:TIGR02169 456 KLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGE 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 926 ANQT---------LKLQVEQMQEEAKKAITEQKQ------------KMKRLGSDLtSAQKEMKAKHKA---------YEN 975
Cdd:TIGR02169 536 RYATaievaagnrLNNVVVEDDAVAKEAIELLKRrkagratflplnKMRDERRDL-SILSEDGVIGFAvdlvefdpkYEP 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 976 AVSILSRR--LQESL-TAKE--------SAEAELSKLKAQITdGGSN----------------QIAQERIQALETELQAV 1028
Cdd:TIGR02169 615 AFKYVFGDtlVVEDIeAARRlmgkyrmvTLEGELFEKSGAMT-GGSRaprggilfsrsepaelQRLRERLEGLKRELSSL 693
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1029 RSSKLMLEKELQEVISLTS------------------------QELEEYREKVLELEDELQESRG----FRRKIKRLEEI 1080
Cdd:TIGR02169 694 QSELRRIENRLDELSQELSdasrkigeiekeieqleqeeeklkERLEELEEDLSSLEQEIENVKSelkeLEARIEELEED 773
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1081 NKKLALELEHERGKL--TGLSQSNAALREhnnvLETALAKREADLVQLNlqvqAVLKRKEEEDQQMQQLIQALQASLEKE 1158
Cdd:TIGR02169 774 LHKLEEALNDLEARLshSRIPEIQAELSK----LEEEVSRIEARLREIE----QKLNRLTLEKEYLEKEIQELQEQRIDL 845
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1159 KSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQ 1238
Cdd:TIGR02169 846 KEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAK 925
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1239 LQLLQKKLDD------KLSEQPLVSQEVEDLKWEVEQKEREIGTLK-------QQLDMSEQRsHKELEGMQVVLQNIKTE 1305
Cdd:TIGR02169 926 LEALEEELSEiedpkgEDEEIPEEELSLEDVQAELQRVEEEIRALEpvnmlaiQEYEEVLKR-LDELKEKRAKLEEERKA 1004
|
810
....*....|....*..
gi 2024459673 1306 LEVVREDLSVTQKDKFM 1322
Cdd:TIGR02169 1005 ILERIEEYEKKKREVFM 1021
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
649-1152 |
5.36e-13 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 74.09 E-value: 5.36e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 649 EEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQEHLDLMKQFT-------MTQEMLHTKEQTLDDLQTQY 721
Cdd:pfam10174 268 EDREEEIKQMEVYKSHSKFMKNKIDQLKQELSKKESELLALQTKLETLTNQNSdckqhieVLKESLTAKEQRAAILQTEV 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 722 DELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENL 801
Cdd:pfam10174 348 DALRLRLEEKESFLNKKTKQLQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAGLKERVKSL 427
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 802 QQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRldsEMKELKRELLQIQVEKQSLETEHSKLQKE 881
Cdd:pfam10174 428 QTDSSNTDTALTTLEEALSEKERIIERLKEQREREDRERLEELESLKK---ENKDLKEKVSALQPELTEKESSLIDLKEH 504
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 882 VTEVHQQMVEIENHLQS----VQKERDEMeTRLQSLQFDKEQMASLAEAN-------QTLKLQVEQMQEEAKKAITEqkq 950
Cdd:pfam10174 505 ASSLASSGLKKDSKLKSleiaVEQKKEEC-SKLENQLKKAHNAEEAVRTNpeindriRLLEQEVARYKEESGKAQAE--- 580
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 951 kMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQEsltakESAEAELSKLKAQITDGGSNQIAQEriqALETELQAVRS 1030
Cdd:pfam10174 581 -VERLLGILREVENEKNDKDKKIAELESLTLRQMKE-----QNKKVANIKHGQQEMKKKGAQLLEE---ARRREDNLADN 651
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1031 SKLMLEKELQEVISLTSQELEEYREKVLELEDELQESRGFRRKI-----KRLEEInkklaLELEHErGKLTGLSQ--SNA 1103
Cdd:pfam10174 652 SQQLQLEELMGALEKTRQELDATKARLSSTQQSLAEKDGHLTNLraerrKQLEEI-----LEMKQE-ALLAAISEkdANI 725
|
490 500 510 520
....*....|....*....|....*....|....*....|....*....
gi 2024459673 1104 ALREhnnvLETALAKREADLVqlnlqvqAVLKRkeEEDQQMQQLIQALQ 1152
Cdd:pfam10174 726 ALLE----LSSSKKKKTQEEV-------MALKR--EKDRLVHQLKQQTQ 761
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
604-1169 |
5.78e-13 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 73.94 E-value: 5.78e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 604 RSIKEKERIAAQLQNIEAdmldqeaafmQIQEAKTMVEEDLqRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRD 683
Cdd:PRK03918 176 RRIERLEKFIKRTENIEE----------LIKEKEKELEEVL-REINEISSELPELREELEKLEKEVKELEELKEEIEELE 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 684 LQLESLQQEHLDLMKQFTMTQEMLHTKEQTLDDLQTQ---YDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAK 760
Cdd:PRK03918 245 KELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKvkeLKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEIN 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 761 ASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSS-----QVENLQQENGSLKKQ-----VQKVKEQFLQQKVMVEAYR 830
Cdd:PRK03918 325 GIEERIKELEEKEERLEELKKKLKELEKRLEELEERhelyeEAKAKKEELERLKKRltgltPEKLEKELEELEKAKEEIE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 831 RDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEH-----SKLQKEVTEVHQQMVEIENHLQSVQKERDE 905
Cdd:PRK03918 405 EEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHrkellEEYTAELKRIEKELKEIEEKERKLRKELRE 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 906 MET------RLQSLQFDKEQMASLAEanQTLKLQVEQMQEEAKKAiTEQKQKMKRLGSDLTSAQKEMKaKHKAYENavsi 979
Cdd:PRK03918 485 LEKvlkkesELIKLKELAEQLKELEE--KLKKYNLEELEKKAEEY-EKLKEKLIKLKGEIKSLKKELE-KLEELKK---- 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 980 lsrRLQESLTAKESAEAELSKLKAQITDGGSNQIAQ--ERIQALET---ELQAVRSSKLMLEKELQEvISLTSQELEEYR 1054
Cdd:PRK03918 557 ---KLAELEKKLDELEEELAELLKELEELGFESVEEleERLKELEPfynEYLELKDAEKELEREEKE-LKKLEEELDKAF 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1055 EKVLELEDELQESRgfrrkiKRLEEINKKLALElEHE--RGKLTGLSQSNAALREHNNVLETALAKREADLVQLNLQVQA 1132
Cdd:PRK03918 633 EELAETEKRLEELR------KELEELEKKYSEE-EYEelREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEE 705
|
570 580 590
....*....|....*....|....*....|....*..
gi 2024459673 1133 VLKRKEEEDqqmqqliqalqaSLEKEKSKVKDLKEQV 1169
Cdd:PRK03918 706 REKAKKELE------------KLEKALERVEELREKV 730
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
584-947 |
1.34e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.79 E-value: 1.34e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 584 LEHLKLENVALSQQLTETQHRSIKEKERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEEdLQRKLEEFEDEKEQLQKMAD 663
Cdd:TIGR02169 683 LEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEE-LEEDLSSLEQEIENVKSELK 761
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 664 saaTLEQELDQVKLTLHQRDLQLESLQQEhldlmkqftMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQ 743
Cdd:TIGR02169 762 ---ELEARIEELEEDLHKLEEALNDLEAR---------LSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKE 829
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 744 YLQNEKivlevalQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQFLQQK 823
Cdd:TIGR02169 830 YLEKEI-------QELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELE 902
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 824 VMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIqVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKER 903
Cdd:TIGR02169 903 RKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGED-EEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEY 981
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2024459673 904 DEMETRLQSLqfdKEQMASLAEANQTLKLQVEQMQEEAKKAITE 947
Cdd:TIGR02169 982 EEVLKRLDEL---KEKRAKLEEERKAILERIEEYEKKKREVFME 1022
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
608-1062 |
1.48e-12 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 72.77 E-value: 1.48e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 608 EKERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLE 687
Cdd:PRK02224 308 DAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIE 387
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 688 SLQQEHLDLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDatskddmiqyLQNEKIVLEVAlqtakasQDQLD 767
Cdd:PRK02224 388 ELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEAT----------LRTARERVEEA-------EALLE 450
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 768 EGT-KRLGEDTEvTSEILEQLRQemaiRSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKD--QLISELK 844
Cdd:PRK02224 451 AGKcPECGQPVE-GSPHVETIEE----DRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEErrEDLEELI 525
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 845 ATkKRLDSEMKELKREllQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLA 924
Cdd:PRK02224 526 AE-RRETIEEKRERAE--ELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLLAAIA 602
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 925 EANQTLklqveQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKayENAVSILSRRLQESLTAKESAEAELSKLKAQ 1004
Cdd:PRK02224 603 DAEDEI-----ERLREKREALAELNDERRERLAEKRERKRELEAEFD--EARIEEAREDKERAEEYLEQVEEKLDELREE 675
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2024459673 1005 ITDggsnqiAQERIQALETELQAVRSsklmLEKELQEVISlTSQELEEYREKVLELED 1062
Cdd:PRK02224 676 RDD------LQAEIGAVENELEELEE----LRERREALEN-RVEALEALYDEAEELES 722
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
443-1045 |
1.88e-12 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 71.98 E-value: 1.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 443 EVATLKQSCWDLERAMADLQNTLEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQSQLQ 522
Cdd:TIGR04523 125 ELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLS 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 523 KVQlertTLTNKLKASETEITSLQNVRQWYQQQLVLAQEARVRLQSEMANIQAgQMTQAGVLEHLKLENVALSQQLTETQ 602
Cdd:TIGR04523 205 NLK----KKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQT-QLNQLKDEQNKIKKQLSEKQKELEQN 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 603 HRSIKEKEriaAQLQNIEadmldqeaafMQIQEAKTMVEEDLQRKLeefedeKEQLQKMADSAATLEQELDQVKLTLHQR 682
Cdd:TIGR04523 280 NKKIKELE---KQLNQLK----------SEISDLNNQKEQDWNKEL------KSELKNQEKKLEEIQNQISQNNKIISQL 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 683 DLQLESLQQEhldlmkqftmtqemLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKAS 762
Cdd:TIGR04523 341 NEQISQLKKE--------------LTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKL 406
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 763 QDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISE 842
Cdd:TIGR04523 407 NQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQ 486
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 843 LKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEqmas 922
Cdd:TIGR04523 487 KQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENLEKE---- 562
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 923 LAEANQTLklqvEQMQEEAKKAITEQKQKMKRLgSDLTSAQKEMKAKHKAYENAVSILSRRLqesltakESAEAELSKLK 1002
Cdd:TIGR04523 563 IDEKNKEI----EELKQTQKSLKKKQEEKQELI-DQKEKEKKDLIKEIEEKEKKISSLEKEL-------EKAKKENEKLS 630
|
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 2024459673 1003 AQITD-GGSNQIAQERIQALETELQAVRSSKLMLEKELQEVISL 1045
Cdd:TIGR04523 631 SIIKNiKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTK 674
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
792-1245 |
4.39e-12 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 70.95 E-value: 4.39e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 792 AIRSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSL 871
Cdd:COG4717 42 FIRAMLLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 872 ETEhsklqkevtevhQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQK 951
Cdd:COG4717 122 EKL------------LQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLA 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 952 MKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAEL--SKLKAQITDGGSNQIAQERIQALETELQAVR 1029
Cdd:COG4717 190 TEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELeaAALEERLKEARLLLLIAAALLALLGLGGSLL 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1030 SSKLMLEKELQEVISLTSQELEEYREKVLELEDELQESRGFRRKI----KRLEEINKKLALELEHERGKLTGLSQSNAAL 1105
Cdd:COG4717 270 SLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEeleeEELEELLAALGLPPDLSPEELLELLDRIEEL 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1106 REHNNVLETalAKREADLVQLNLQVQAVLKR-KEEEDQQMQQLIQALQAsLEKEKSKVKDLKEQVAAAKADAAHNRRHYR 1184
Cdd:COG4717 350 QELLREAEE--LEEELQLEELEQEIAALLAEaGVEDEEELRAALEQAEE-YQELKEELEELEEQLEELLGELEELLEALD 426
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024459673 1185 AAAL--ELNEVKKELHAKELLVQALQAEVDKL--QVEDEKHSQEVSQFQQELAEARSQLQLLQKK 1245
Cdd:COG4717 427 EEELeeELEELEEELEELEEELEELREELAELeaELEQLEEDGELAELLQELEELKAELRELAEE 491
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
584-943 |
9.84e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 70.09 E-value: 9.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 584 LEHLKLENVALSQQLTETQhrsiKEKERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMAD 663
Cdd:TIGR02168 686 IEELEEKIAELEKALAELR----KELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEA 761
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 664 SAATLEQELDQVKLTLHQRDLQLESLQQEHLDLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQ 743
Cdd:TIGR02168 762 EIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLE 841
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 744 YLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQFLQQK 823
Cdd:TIGR02168 842 DLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELR 921
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 824 VMVEAYRRDASSKDQLISELkatkkrLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKER 903
Cdd:TIGR02168 922 EKLAQLELRLEGLEVRIDNL------QERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEY 995
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2024459673 904 DEMETRLQSLqfdKEQMASLAEANQTLKLQVEQMQEEAKK 943
Cdd:TIGR02168 996 EELKERYDFL---TAQKEDLTEAKETLEEAIEEIDREARE 1032
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
815-1331 |
2.45e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 68.55 E-value: 2.45e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 815 VKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEM----------KELKRELLQIQVEKQSLETEHSKLQKEVTE 884
Cdd:PRK03918 146 SREKVVRQILGLDDYENAYKNLGEVIKEIKRRIERLEKFIkrtenieeliKEKEKELEEVLREINEISSELPELREELEK 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 885 VHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMAslaeanqtlklQVEQMQEEAKKAITEQKQKMKRLgsdltsaqK 964
Cdd:PRK03918 226 LEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIR-----------ELEERIEELKKEIEELEEKVKEL--------K 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 965 EMKAKHKAYEnavsILSRRLQESLTAKESAEAELSKLKAQItdggsnQIAQERIQALETelqavrssklmLEKELQEvis 1044
Cdd:PRK03918 287 ELKEKAEEYI----KLSEFYEEYLDELREIEKRLSRLEEEI------NGIEERIKELEE-----------KEERLEE--- 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1045 lTSQELEEYREKVLELEDELQESRGFRRKIKRLEEINKKLA-LELEHERGKLTGLSQSNAALREHNNVLETALAKREADL 1123
Cdd:PRK03918 343 -LKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTgLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEI 421
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1124 VQLNLQVQAVLKRK-----------EEEDQQMQQLIQALQASLEKEK----SKVKDLKEQVAAAKADAAHNRR--HYRAA 1186
Cdd:PRK03918 422 KELKKAIEELKKAKgkcpvcgreltEEHRKELLEEYTAELKRIEKELkeieEKERKLRKELRELEKVLKKESEliKLKEL 501
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1187 ALELNEVKKELhaKELLVQALQA---EVDKLQVEDEKHSQEVSQFQQEL---AEARSQLQLLQKKLDDKLSEQPLVSQEV 1260
Cdd:PRK03918 502 AEQLKELEEKL--KKYNLEELEKkaeEYEKLKEKLIKLKGEIKSLKKELeklEELKKKLAELEKKLDELEEELAELLKEL 579
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024459673 1261 EDLKWE-VEQKEREIGTLKQQLD--MSEQRSHKELEGMQVVLQNIKTELEVVREDLSVTQKDKFMLQAKVSELK 1331
Cdd:PRK03918 580 EELGFEsVEELEERLKELEPFYNeyLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELE 653
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
632-1329 |
3.95e-11 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 67.82 E-value: 3.95e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 632 QIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLtlhqrdlQLESLQQEHLDLMKQFTMTQEMLHTKE 711
Cdd:pfam05483 89 KIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSL-------KLEEEIQENKDLIKENNATRHLCNLLK 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 712 QTlddlqTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKrLGEDTEVTSEILEQLRQEM 791
Cdd:pfam05483 162 ET-----CARSAEKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRVQAENARLEMHFK-LKEDHEKIQHLEEEYKKEI 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 792 AIRSSQVENL-----QQENGS------LKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELK----------ATKKRL 850
Cdd:pfam05483 236 NDKEKQVSLLliqitEKENKMkdltflLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEdikmslqrsmSTQKAL 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 851 DSEMKELKRELLQIQVEKQSLETEHSKLQKE----VTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEA 926
Cdd:pfam05483 316 EEDLQIATKTICQLTEEKEAQMEELNKAKAAhsfvVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEE 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 927 NQTLKLQVEQMQEEAKKAITE------QKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSK 1000
Cdd:pfam05483 396 MTKFKNNKEVELEELKKILAEdeklldEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVED 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1001 LKAQItdggsnqiaqERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVleLEDELQESRgFRRKIKRLEEI 1080
Cdd:pfam05483 476 LKTEL----------EKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDI--INCKKQEER-MLKQIENLEEK 542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1081 NKKLALELEHERGKltglsqsnaaLREHNNVLETALAKREADLVQLNLQVQavlkRKEEEDQQMQQLIQALQASLEKEKS 1160
Cdd:pfam05483 543 EMNLRDELESVREE----------FIQKGDEVKCKLDKSEENARSIEYEVL----KKEKQMKILENKCNNLKKQIENKNK 608
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1161 KVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAK----ELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEAR 1236
Cdd:pfam05483 609 NIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAkqkfEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAV 688
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1237 SQLQLLQKKLDDKLSEQ-PLVSQEVEDLKWEVEQKEREIGTLKQQldmsEQRSHKELEGMQVVLQNIKTELEVVREDLSV 1315
Cdd:pfam05483 689 KLQKEIDKRCQHKIAEMvALMEKHKHQYDKIIEERDSELGLYKNK----EQEQSSAKAALEIELSNIKAELLSLKKQLEI 764
|
730
....*....|....
gi 2024459673 1316 TQKDKFMLQAKVSE 1329
Cdd:pfam05483 765 EKEEKEKLKMEAKE 778
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
669-1263 |
4.28e-11 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 67.89 E-value: 4.28e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 669 EQELDQVKLTLHQRDLQLESLQQEHLDLMKQFTMTQEMLHTK-------EQTLDDLQTQYDELKARLEEFQSDATSKDDM 741
Cdd:pfam01576 11 EEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAEtelcaeaEEMRARLAARKQELEEILHELESRLEEEEER 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 742 IQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQFLQ 821
Cdd:pfam01576 91 SQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEERISEFTSNLAE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 822 QKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQ- 900
Cdd:pfam01576 171 EEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALa 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 901 KERDEMETRLQSLQFDKEQMASLAEANQTLKLQvEQMQEEAKKAITEQKQKMKRLGSDL------TSAQKEMKAKHkayE 974
Cdd:pfam01576 251 RLEEETAQKNNALKKIRELEAQISELQEDLESE-RAARNKAEKQRRDLGEELEALKTELedtldtTAAQQELRSKR---E 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 975 NAVSILSRRLQESLTAKESAEAELSKLKAQITDGGSNQIAQER--IQALETELQAVRSSKLMLEKELQeVISLTSQELEE 1052
Cdd:pfam01576 327 QEVTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKrnKANLEKAKQALESENAELQAELR-TLQQAKQDSEH 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1053 YREKvleLEDELQE-----SRGFRRKIKRLEEINkKLALELEHERGKLtglsqsnaalrehnNVLETALAKREADLVQLN 1127
Cdd:pfam01576 406 KRKK---LEGQLQElqarlSESERQRAELAEKLS-KLQSELESVSSLL--------------NEAEGKNIKLSKDVSSLE 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1128 LQVQAVLKRKEEEDQQMQQLIQALQAsLEKEKSkvkDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQAL 1207
Cdd:pfam01576 468 SQLQDTQELLQEETRQKLNLSTRLRQ-LEDERN---SLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEAL 543
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 2024459673 1208 QAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDL 1263
Cdd:pfam01576 544 EEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNL 599
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
640-1215 |
6.33e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 67.37 E-value: 6.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 640 VEEDLQRKLEEFEDEKEQL--QKMADSAATLEQELDQVKLTLHQRDLQLESLQQEHLDLmkqftmtQEMLHTKEQTLDDL 717
Cdd:PRK02224 181 VLSDQRGSLDQLKAQIEEKeeKDLHERLNGLESELAELDEEIERYEEQREQARETRDEA-------DEVLEEHEERREEL 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 718 qtqyDELKARLEEFQSDATSKDDmiqylqnEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTS---EILEQLRQEMAIR 794
Cdd:PRK02224 254 ----ETLEAEIEDLRETIAETER-------EREELAEEVRDLRERLEELEEERDDLLAEAGLDDadaEAVEARREELEDR 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 795 SSQVENLQQENgslKKQVQKVKEQflqqkvmVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETE 874
Cdd:PRK02224 323 DEELRDRLEEC---RVAAQAHNEE-------AESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 875 HSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKL-----QVEQMQEEAKKAIT--- 946
Cdd:PRK02224 393 IEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEagkcpECGQPVEGSPHVETiee 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 947 --EQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRlqESLTAKESAEAELSKLKAQITDGGSNQIAQ--ERIQALE 1022
Cdd:PRK02224 473 drERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRI--ERLEERREDLEELIAERRETIEEKRERAEElrERAAELE 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1023 TELQAVRSS----KLMLEKELQEVISLTS--QELEEYREKVLELEDELQESRGFRRKIKRLEEINKKLALELEHERGKLT 1096
Cdd:PRK02224 551 AEAEEKREAaaeaEEEAEEAREEVAELNSklAELKERIESLERIRTLLAAIADAEDEIERLREKREALAELNDERRERLA 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1097 GLSQSNAALRE--HNNVLETALAKREaDLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEkekskvkdlkeqvaaaka 1174
Cdd:PRK02224 631 EKRERKRELEAefDEARIEEAREDKE-RAEEYLEQVEEKLDELREERDDLQAEIGAVENELE------------------ 691
|
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 2024459673 1175 daahnrrhyraaalELNEVKKELHAKELLVQALQA---EVDKLQ 1215
Cdd:PRK02224 692 --------------ELEELRERREALENRVEALEAlydEAEELE 721
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
711-1303 |
7.19e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 67.07 E-value: 7.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 711 EQTLDDLQTQYDELKARLEEfQSDATSKDDMiqYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQE 790
Cdd:pfam15921 77 ERVLEEYSHQVKDLQRRLNE-SNELHEKQKF--YLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 791 MAIRSSQVENLQQENGSLKKQVQKV---KEQFLQQKVMVEAYRRDASSKD-------------QLISELKATKKRLDSEM 854
Cdd:pfam15921 154 LEAAKCLKEDMLEDSNTQIEQLRKMmlsHEGVLQEIRSILVDFEEASGKKiyehdsmstmhfrSLGSAISKILRELDTEI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 855 KELKRELLQIQVEKQSLETEHSK-----LQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQT 929
Cdd:pfam15921 234 SYLKGRIFPVEDQLEALKSESQNkiellLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNS 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 930 LKLQ--------VEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEM---KAKHKAYENAVSILSRRLQESLTAKESAEAEL 998
Cdd:pfam15921 314 MYMRqlsdlestVSQLRSELREAKRMYEDKIEELEKQLVLANSELteaRTERDQFSQESGNLDDQLQKLLADLHKREKEL 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 999 SKLKAQITD------GGSNQIAQER---------IQALETELQAVRSS-KLMLEKELQEVisltsQELEEYREKVLELED 1062
Cdd:pfam15921 394 SLEKEQNKRlwdrdtGNSITIDHLRrelddrnmeVQRLEALLKAMKSEcQGQMERQMAAI-----QGKNESLEKVSSLTA 468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1063 ELQESRGFRRKIkrLEEIN-KKLALE-LEHERGKLTGLSQSNAALREHNNVLETALAKReadlVQLNLQVQAVLKRKEEE 1140
Cdd:pfam15921 469 QLESTKEMLRKV--VEELTaKKMTLEsSERTVSDLTASLQEKERAIEATNAEITKLRSR----VDLKLQELQHLKNEGDH 542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1141 DQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQA-------------- 1206
Cdd:pfam15921 543 LRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEfkilkdkkdakire 622
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1207 LQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQKEREIGTLKQQLDMSEQ 1286
Cdd:pfam15921 623 LEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLK 702
|
650
....*....|....*..
gi 2024459673 1287 RSHKELEGMQVVLQNIK 1303
Cdd:pfam15921 703 SAQSELEQTRNTLKSME 719
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
808-1337 |
1.10e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 66.60 E-value: 1.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 808 LKKQVQKVKEQFLQQKVmvEAYRRDASSKDQLISEL---KATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTE 884
Cdd:PRK02224 192 LKAQIEEKEEKDLHERL--NGLESELAELDEEIERYeeqREQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAE 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 885 VHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQK 964
Cdd:PRK02224 270 TEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLRE 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 965 EMKAkhkayenavsiLSRRLQESLTAKESAEAELSKLKAQITDGgsnqiaQERIQALETELQAVRSSKLMLEKELQEVIS 1044
Cdd:PRK02224 350 DADD-----------LEERAEELREEAAELESELEEAREAVEDR------REEIEELEEEIEELRERFGDAPVDLGNAED 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1045 ---LTSQELEEYREKVLELEDELQESRGFRRKIKRLEEINK-----------KLALELEHERGKLTGLSQSNAALREHNN 1110
Cdd:PRK02224 413 fleELREERDELREREAELEATLRTARERVEEAEALLEAGKcpecgqpvegsPHVETIEEDRERVEELEAELEDLEEEVE 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1111 VLETALAKREaDLVQLNLQVQavlkRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALEL 1190
Cdd:PRK02224 493 EVEERLERAE-DLVEAEDRIE----RLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEA 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1191 NEVKKELHAKELLVQALQAEVDKLQvedekhsqEVSQFQQELAEARSQLQLLQKKLDDKlseqplvsQEVEDLKWEVEQK 1270
Cdd:PRK02224 568 EEAREEVAELNSKLAELKERIESLE--------RIRTLLAAIADAEDEIERLREKREAL--------AELNDERRERLAE 631
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024459673 1271 ERE-IGTLKQQLDmsEQRshkeLEGMQVVLQNIKTELEVVREDLSVTQKDKFMLQAKVSELKNSMKSL 1337
Cdd:PRK02224 632 KRErKRELEAEFD--EAR----IEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEEL 693
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
484-1239 |
1.14e-10 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 66.53 E-value: 1.14e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 484 EQYQRLMLKVEDMQKSVLTRdSTVHDLRQQLASL--QSQLQKVQLERTTLTNKLKASETEITSLQNVRQWYQQQLVlAQE 561
Cdd:TIGR00618 176 DQYTQLALMEFAKKKSLHGK-AELLTLRSQLLTLctPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKRE-AQE 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 562 ARVRLQSEMANIQAGQMTQAGVLEHLKLENVALSQQltetqhrsiKEKERIAAQLQNIEADMLDQEAAFMQIQEAKTMVE 641
Cdd:TIGR00618 254 EQLKKQQLLKQLRARIEELRAQEAVLEETQERINRA---------RKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRA 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 642 EDLQRKLEEFEDEKEqLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQEHLDL--MKQFTMTQEMLHTKEQTLDDLQT 719
Cdd:TIGR00618 325 KLLMKRAAHVKQQSS-IEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTqhIHTLQQQKTTLTQKLQSLCKELD 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 720 QYDELKARLE-EFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEmairsSQV 798
Cdd:TIGR00618 404 ILQREQATIDtRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQL-----QTK 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 799 ENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLdsemkelkrellqiqvekQSLETEHSKL 878
Cdd:TIGR00618 479 EQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRM------------------QRGEQTYAQL 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 879 QKEVTEVHQQMVEIENHLQSVQkerDEMETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSD 958
Cdd:TIGR00618 541 ETSEEDVYHQLTSERKQRASLK---EQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHAL 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 959 LTSAQKEMKAKHKAYENAVsiLSRRLQESLTAKESAEAELSKLKAqitdggsnQIAQERIQALETELQAVRSSKLMLEKE 1038
Cdd:TIGR00618 618 LRKLQPEQDLQDVRLHLQQ--CSQELALKLTALHALQLTLTQERV--------REHALSIRVLPKELLASRQLALQKMQS 687
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1039 LQEVISLTSQELEEYREKVLELEDELQESrgfRRKIKRLEEINKKLALELEHErgkltgLSQSNAALREHNNVLETALAK 1118
Cdd:TIGR00618 688 EKEQLTYWKEMLAQCQTLLRELETHIEEY---DREFNEIENASSSLGSDLAAR------EDALNQSLKELMHQARTVLKA 758
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1119 READLVQLNLQVQAVLKRkeeeDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELH 1198
Cdd:TIGR00618 759 RTEAHFNNNEEVTAALQT----GAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFL 834
|
730 740 750 760
....*....|....*....|....*....|....*....|.
gi 2024459673 1199 AKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQL 1239
Cdd:TIGR00618 835 SRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKIIQLS 875
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
455-1159 |
1.35e-10 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 66.61 E-value: 1.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 455 ERAMADLQNTLEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDL--RQQLASLQSQLQKVQLERTTLT 532
Cdd:TIGR00606 318 ERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLatRLELDGFERGPFSERQIKNFHT 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 533 NKLKASETEITSLQNVRQWYQQQLVLAQEARVRLQSEMAniqagqmtqaGVLEHLKLENVALSQQLTETQHrsikekerI 612
Cdd:TIGR00606 398 LVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKK----------GLGRTIELKKEILEKKQEELKF--------V 459
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 613 AAQLQNIEADMLDqeaaFMQIQEAKTMVEEDLQR--KLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQ 690
Cdd:TIGR00606 460 IKELQQLEGSSDR----ILELDQELRKAERELSKaeKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRT 535
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 691 QEHLDLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARlEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGT 770
Cdd:TIGR00606 536 QMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNK-KQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNEL 614
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 771 KRLGEDTEVTSEILEQLRQEMAIRSsQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRL 850
Cdd:TIGR00606 615 ESKEEQLSSYEDKLFDVCGSQDEES-DLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAEL 693
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 851 DSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTL 930
Cdd:TIGR00606 694 QEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETL 773
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 931 KLQVEQMQEEAKKAITEQKqKMKRLGSDLTSAQKemKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQITDGGS 1010
Cdd:TIGR00606 774 LGTIMPEEESAKVCLTDVT-IMERFQMELKDVER--KIAQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRK 850
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1011 -NQIAQERIQALETELQAVRSSKLMLE-----------------KELQEVISLTSQELEEYREKVLELEDELQESRGFrr 1072
Cdd:TIGR00606 851 lIQDQQEQIQHLKSKTNELKSEKLQIGtnlqrrqqfeeqlvelsTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEEL-- 928
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1073 kIKRLEEINKKLALELEHERGKLTGLSQSNAALREH-NNVLETALAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQAL 1151
Cdd:TIGR00606 929 -ISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKiQDGKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDI 1007
|
....*...
gi 2024459673 1152 QASLEKEK 1159
Cdd:TIGR00606 1008 DTQKIQER 1015
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
541-1346 |
2.05e-10 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 65.84 E-value: 2.05e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 541 EITSLQNVRQWYQQQLVLAQEARVRLQSEMANIQAGQ---MTQAGVLEHLKLENVALSQQLTETQH--RSIKEKERIAAQ 615
Cdd:TIGR00606 201 KVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSReivKSYENELDPLKNRLKEIEHNLSKIMKldNEIKALKSRKKQ 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 616 LQNIEADM-LDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVK--LTLHQRDLQLES-LQQ 691
Cdd:TIGR00606 281 MEKDNSELeLKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKteLLVEQGRLQLQAdRHQ 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 692 EHL---DLMKQFTMTQEMLHTKEQTlDDLQTQYDELKARLEEFQSDatsKDDMIQYLQNEkivLEVALQTAKASQDQLDE 768
Cdd:TIGR00606 361 EHIrarDSLIQSLATRLELDGFERG-PFSERQIKNFHTLVIERQED---EAKTAAQLCAD---LQSKERLKQEQADEIRD 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 769 GTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQ-----FLQQKVMVEAYRRDASSKDQLISEL 843
Cdd:TIGR00606 434 EKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAerelsKAEKNSLTETLKKEVKSLQNEKADL 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 844 KATKKRLDSEMKELKRE---LLQIQVEKQSLETEHSKLQKEVTEVHQQMV----------EIENHLQSVQKERDEMETRL 910
Cdd:TIGR00606 514 DRKLRKLDQEMEQLNHHtttRTQMEMLTKDKMDKDEQIRKIKSRHSDELTsllgyfpnkkQLEDWLHSKSKEINQTRDRL 593
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 911 QSLQfdkEQMASLAEANQTLKLQVEQMQEEAKKAITE--QKQKMKRLGSDLTSAQKEMK--AKHKAYENAVSILSRRLQE 986
Cdd:TIGR00606 594 AKLN---KELASLEQNKNHINNELESKEEQLSSYEDKlfDVCGSQDEESDLERLKEEIEksSKQRAMLAGATAVYSQFIT 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 987 SLTAKESA-----------EAELSKLKAQITDGG-SNQIAQERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYR 1054
Cdd:TIGR00606 671 QLTDENQSccpvcqrvfqtEAELQEFISDLQSKLrLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELR 750
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1055 EKVLELEDELQESRG-FRRKIKRLEEINKKLALElEHERGKLTGLSQSNAALREHNNVLETALAKreADLVQLNLQVQAV 1133
Cdd:TIGR00606 751 NKLQKVNRDIQRLKNdIEEQETLLGTIMPEEESA-KVCLTDVTIMERFQMELKDVERKIAQQAAK--LQGSDLDRTVQQV 827
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1134 LKRKEEEDQQM----------QQLIQALQASLEKEKSKVKDLKE---QVAAAKADAAHNRRHYRAAALELNEVKKELHAK 1200
Cdd:TIGR00606 828 NQEKQEKQHELdtvvskielnRKLIQDQQEQIQHLKSKTNELKSeklQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDA 907
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1201 ELLVQALQAEVDKLQVEDEkhsQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWE-VEQKEREIGTLKQ 1279
Cdd:TIGR00606 908 KEQDSPLETFLEKDQQEKE---ELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDyLKQKETELNTVNA 984
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024459673 1280 QLDMSEQRSHKELEGMQVVLQNIKTelEVVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQLKM 1346
Cdd:TIGR00606 985 QLEECEKHQEKINEDMRLMRQDIDT--QKIQERWLQDNLTLRKRENELKEVEEELKQHLKEMGQMQV 1049
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1016-1282 |
2.44e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 65.34 E-value: 2.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1016 ERIQALETEL---------QAVRSSK-LMLEKELQEV-ISLTSQELEEYREKVLELEDELQESRgfrRKIKRLEEINKKL 1084
Cdd:COG1196 189 ERLEDILGELerqleplerQAEKAERyRELKEELKELeAELLLLKLRELEAELEELEAELEELE---AELEELEAELAEL 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1085 ALELEHERGKLTGLSQSNAALREHNNVLETALAKREADLVQLNLQVQAVLKRKEEEDQQMQQL---IQALQASLEKEKSK 1161
Cdd:COG1196 266 EAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELeeeLEELEEELEELEEE 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1162 VKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQL 1241
Cdd:COG1196 346 LEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEE 425
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 2024459673 1242 LQKKLDDKLSEQPLVSQEVEDLKWEVEQKEREIGTLKQQLD 1282
Cdd:COG1196 426 LEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLA 466
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
768-1471 |
2.68e-10 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 65.38 E-value: 2.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 768 EGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQFLQQKVMV------EAYRRDASSKDQLI- 840
Cdd:pfam02463 170 KKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYldylklNEERIDLLQELLRDe 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 841 -SELKATKKRLDSEMKELKRELLQIQVEKQS--------------LETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDE 905
Cdd:pfam02463 250 qEEIESSKQEIEKEEEKLAQVLKENKEEEKEkklqeeelkllakeEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKE 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 906 METRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKM--KRLGSDLTSAQKEMKAKHKAY----ENAVSI 979
Cdd:pfam02463 330 LKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLakKKLESERLSSAAKLKEEELELkseeEKEAQL 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 980 LSRRLQESLTAKESAEAELSKLKAQITDGGSNQIAQERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLE 1059
Cdd:pfam02463 410 LLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELL 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1060 LEDELQESRGFRRKIKRlEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETA-LAKREADLVQLNLQVQAVLKRKE 1138
Cdd:pfam02463 490 LSRQKLEERSQKESKAR-SGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAiSTAVIVEVSATADEVEERQKLVR 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1139 EEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQaEVDKLQVED 1218
Cdd:pfam02463 569 ALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLK-ESAKAKESG 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1219 EKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQKEREIGTLKQQLDM---SEQRSHKELEGM 1295
Cdd:pfam02463 648 LRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELkklKLEAEELLADRV 727
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1296 QVVLQNIKTELEVVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQLKMDLKHG---------KMKKRKGENNSSNPV 1366
Cdd:pfam02463 728 QEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTeklkveeekEEKLKAQEEELRALE 807
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1367 TPVKIPDCPVPAALLEELLKPSTAVSKEPLKNLNSCLRQLKQEMDSLQRQMEEHTITVHESMSSWTQIEEQLMDFTST-- 1444
Cdd:pfam02463 808 EELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKde 887
|
730 740
....*....|....*....|....*....
gi 2024459673 1445 --SPATASNQQERPALVETKHNCDVSDKE 1471
Cdd:pfam02463 888 leSKEEKEKEEKKELEEESQKLNLLEEKE 916
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1112-1420 |
2.85e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.46 E-value: 2.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1112 LETALAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELN 1191
Cdd:TIGR02168 191 LEDILNELERQLKSLERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLE 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1192 EVKKELHAKELLVQALQ-------AEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLK 1264
Cdd:TIGR02168 271 ELRLEVSELEEEIEELQkelyalaNEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELK 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1265 WEVEQKEREIGTLKQQLDMSEQRshkeLEGMQVVLQNIKTELEVVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQL 1344
Cdd:TIGR02168 351 EELESLEAELEELEAELEELESR----LEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEEL 426
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024459673 1345 KMDLKHGKMKKRKGENNSSNPVTPVKIPDCPVPAALLEElLKPSTAVSKEPLKNLNSCLRQLKQEMDSLQRQMEEH 1420
Cdd:TIGR02168 427 LKKLEEAELKELQAELEELEEELEELQEELERLEEALEE-LREELEEAEQALDAAERELAQLQARLDSLERLQENL 501
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
779-1419 |
4.45e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 64.55 E-value: 4.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 779 VTSEILEQLRQEMAIRSSqVENLQQENGsLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLiSELKATKKRLDSEMKELK 858
Cdd:COG4913 213 VREYMLEEPDTFEAADAL-VEHFDDLER-AHEALEDAREQIELLEPIRELAERYAAARERL-AELEYLRAALRLWFAQRR 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 859 RELLQIQVEKqsletehskLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQmaslaeanqtlklQVEQMQ 938
Cdd:COG4913 290 LELLEAELEE---------LRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLE-------------QLEREI 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 939 EEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQITDggsnqiAQERI 1018
Cdd:COG4913 348 ERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRD------LRREL 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1019 QALETELQAVRSSKLMLEKELQEVISLTSQELEEYRE---------KVLELEDELQES-----RGFRRKI----KRLEEI 1080
Cdd:COG4913 422 RELEAEIASLERRKSNIPARLLALRDALAEALGLDEAelpfvgeliEVRPEEERWRGAiervlGGFALTLlvppEHYAAA 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1081 NKklALELEHERGKLTGlsqsnaaLREHNNVLETALAKREADLVQLNLQVQAvlkrkeeedqqmQQLIQALQASLEKEKS 1160
Cdd:COG4913 502 LR--WVNRLHLRGRLVY-------ERVRTGLPDPERPRLDPDSLAGKLDFKP------------HPFRAWLEAELGRRFD 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1161 --KVKDLKE------------QVAAAKADAAHNRRHYRAAALEL---NEVKKElhakellvqALQAEVDKLqvedekhsq 1223
Cdd:COG4913 561 yvCVDSPEElrrhpraitragQVKGNGTRHEKDDRRRIRSRYVLgfdNRAKLA---------ALEAELAEL--------- 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1224 evsqfQQELAEARSQLQLLQKKLDDkLSEQPLVSQEVEDLKWE---VEQKEREIGTLKQQLDmseqrshkELEGMQVVLQ 1300
Cdd:COG4913 623 -----EEELAEAEERLEALEAELDA-LQERREALQRLAEYSWDeidVASAEREIAELEAELE--------RLDASSDDLA 688
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1301 NIKTELEVVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQLKMDLKHGKMKKRKGennssnpvtpvkipdcpvPAAL 1380
Cdd:COG4913 689 ALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLE------------------LRAL 750
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 2024459673 1381 LEELLK--PSTAVSKEPLKNLNSCLRQLKQEMDSLQRQMEE 1419
Cdd:COG4913 751 LEERFAaaLGDAVERELRENLEERIDALRARLNRAEEELER 791
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
484-1085 |
5.18e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 64.55 E-value: 5.18e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 484 EQYQRLMLKVEDmQKSVLTRdstVHDLRQQLASLQSQLQKVQLERTTLTnkLKASETEITSLQNVRQWYQQQLVLAQEAR 563
Cdd:COG4913 238 ERAHEALEDARE-QIELLEP---IRELAERYAAARERLAELEYLRAALR--LWFAQRRLELLEAELEELRAELARLEAEL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 564 VRLQSEMANIQA------GQMTQAGV--LEHLKLENVALSQQLTETQHRSikekERIAAQLQNIEADMLDQEAAFMQIQE 635
Cdd:COG4913 312 ERLEARLDALREeldeleAQIRGNGGdrLEQLEREIERLERELEERERRR----ARLEALLAALGLPLPASAEEFAALRA 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 636 AktmveedLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQrdlQLESLQQehldlmKQFTMTQEMLHTKEQTLD 715
Cdd:COG4913 388 E-------AAALLEALEEELEALEEALAEAEAALRDLRRELRELEA---EIASLER------RKSNIPARLLALRDALAE 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 716 DLQTQYDEL---------KARLEEFQ--------SDATS-------KDDMIQYLQNEKivLEVALQTAKASQDQLDEGTK 771
Cdd:COG4913 452 ALGLDEAELpfvgelievRPEEERWRgaiervlgGFALTllvppehYAAALRWVNRLH--LRGRLVYERVRTGLPDPERP 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 772 RLGEDTEVT------SEILEQLRQEMAIRSS-----QVENLQQENGSLKKQVQkVKeqflQQKVMVEAYRRDASSKDQLI 840
Cdd:COG4913 530 RLDPDSLAGkldfkpHPFRAWLEAELGRRFDyvcvdSPEELRRHPRAITRAGQ-VK----GNGTRHEKDDRRRIRSRYVL 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 841 -SELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKL--QKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLqfdK 917
Cdd:COG4913 605 gFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALqeRREALQRLAEYSWDEIDVASAEREIAELEAELERL---D 681
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 918 EQMASLAEANQTLKlQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAK---ESA 994
Cdd:COG4913 682 ASSDDLAALEEQLE-ELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERfaaALG 760
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 995 EAELSKLKAQITDggSNQIAQERIQALETELQAVRSSKL------------------MLEKELQEvisLTSQELEEYREK 1056
Cdd:COG4913 761 DAVERELRENLEE--RIDALRARLNRAEEELERAMRAFNrewpaetadldadleslpEYLALLDR---LEEDGLPEYEER 835
|
650 660 670
....*....|....*....|....*....|....*....
gi 2024459673 1057 VLEL--EDELQESRGFRRKIK--------RLEEINKKLA 1085
Cdd:COG4913 836 FKELlnENSIEFVADLLSKLRraireikeRIDPLNDSLK 874
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
400-1290 |
9.98e-10 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 63.66 E-value: 9.98e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 400 AEANQALKEKAELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVATLKQscwDLERAMADLQNTLEAKnaslassnndl 479
Cdd:pfam01576 22 QKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQ---ELEEILHELESRLEEE----------- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 480 qlaEEQYQRLMLKVEDMQKSVLtrdstvhDLRQQLASLQSQLQKVQLERTTLTNKLKASETEITSLQNVRQWYQQQLVLA 559
Cdd:pfam01576 88 ---EERSQQLQNEKKKMQQHIQ-------DLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 560 QEArvrlQSEMANIQAGQMTQAGVLEHLKLENVALSQQLTE-------TQHRSIKEKERIAAQLQNIEADMLDQEAAFMQ 632
Cdd:pfam01576 158 EER----ISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEErlkkeekGRQELEKAKRKLEGESTDLQEQIAELQAQIAE 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 633 IQEAKTMVEEDLQRKLEEFEDEKEQ-------LQKMADSAATLEQELDQ-----VKLTLHQRDL--QLESLQQEHLDLMK 698
Cdd:pfam01576 234 LRAQLAKKEEELQAALARLEEETAQknnalkkIRELEAQISELQEDLESeraarNKAEKQRRDLgeELEALKTELEDTLD 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 699 QFTMTQEMLHTKEQTLDDLQ----------------------TQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVAL 756
Cdd:pfam01576 314 TTAAQQELRSKREQEVTELKkaleeetrsheaqlqemrqkhtQALEELTEQLEQAKRNKANLEKAKQALESENAELQAEL 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 757 QTAKASQDQLDEGTKRLG---EDTEVTSEILEQLRQEMAIRSSQVEN------------------LQQENGSLKKQVQKV 815
Cdd:pfam01576 394 RTLQQAKQDSEHKRKKLEgqlQELQARLSESERQRAELAEKLSKLQSelesvssllneaegknikLSKDVSSLESQLQDT 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 816 KEQF---LQQKVMVEAYRRD-----ASSKDQLISELKATK------KRLDSEMKELKRELLQIQVEKQSLETEHSKLQKE 881
Cdd:pfam01576 474 QELLqeeTRQKLNLSTRLRQlederNSLQEQLEEEEEAKRnverqlSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRE 553
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 882 VTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEAnqtlklqVEQMQEEAKKAITEQKQKMKRLGSDLTS 961
Cdd:pfam01576 554 LEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSN-------LEKKQKKFDQMLAEEKAISARYAEERDR 626
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 962 AQKEMKAKhkayENAVSILSRRLQESLTAKESAE-------AELSKLKAQITDGGSNQIAQERIQ-ALETELQAVRSSKL 1033
Cdd:pfam01576 627 AEAEAREK----ETRALSLARALEEALEAKEELErtnkqlrAEMEDLVSSKDDVGKNVHELERSKrALEQQVEEMKTQLE 702
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1034 MLEKELQEV------ISLTSQELEEYREKVLELEDELQESRGfRRKIKRLEEinkkLALELEHERgkltglSQSNAALre 1107
Cdd:pfam01576 703 ELEDELQATedaklrLEVNMQALKAQFERDLQARDEQGEEKR-RQLVKQVRE----LEAELEDER------KQRAQAV-- 769
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1108 hnnvleTALAKREADLVQLNLQVQAVLKRKEEEDQQMQQLiqalQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAA 1187
Cdd:pfam01576 770 ------AAKKKLELDLKELEAQIDAANKGREEAVKQLKKL----QAQMKDLQRELEEARASRDEILAQSKESEKKLKNLE 839
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1188 LELNEVKKELHAKELLVQALQAEVDKLQVE------------DEKHSQE--VSQFQQELAEARSQLQLLQKK-------- 1245
Cdd:pfam01576 840 AELLQLQEDLAASERARRQAQQERDELADEiasgasgksalqDEKRRLEarIAQLEEELEEEQSNTELLNDRlrkstlqv 919
|
970 980 990 1000
....*....|....*....|....*....|....*....|....*..
gi 2024459673 1246 --LDDKLSEQPLVSQEVEDLKWEVEQKEREIGTLKQQLDMSEQRSHK 1290
Cdd:pfam01576 920 eqLTTELAAERSTSQKSESARQQLERQNKELKAKLQEMEGTVKSKFK 966
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
465-1154 |
2.20e-09 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 62.55 E-value: 2.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 465 LEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSvltRDSTVHDLRQQLASLQSQLQKV----QLERTTLTNKLKASET 540
Cdd:pfam12128 246 LQQEFNTLESAELRLSHLHFGYKSDETLIASRQEE---RQETSAELNQLLRTLDDQWKEKrdelNGELSAADAAVAKDRS 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 541 EITSLQNVRQWYQQ----QLVLAQEARVRLQSEMANIQAGQMTQAGVLEHLKLENVALSQQLTETQHRSI--------KE 608
Cdd:pfam12128 323 ELEALEDQHGAFLDadieTAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIagikdklaKI 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 609 KERIAAQLQNIEADMLDQEAAF-MQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQ------ELDQVKLTLHQ 681
Cdd:pfam12128 403 REARDRQLAVAEDDLQALESELrEQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQlenfdeRIERAREEQEA 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 682 RDLQLESLQQEHLDLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARLEefqsdaTSKDDMIQYLQNEKIVLEVALQTAKA 761
Cdd:pfam12128 483 ANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLF------PQAGTLLHFLRKEAPDWEQSIGKVIS 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 762 SqdqldEGTKRLGEDTEVTSeilEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLIS 841
Cdd:pfam12128 557 P-----ELLHRTDLDPEVWD---GSVGGELNLYGVKLDLKRIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLV 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 842 ELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEvhqqmvEIENHLQSVQKERDEMETRLQSLqfDKEQMA 921
Cdd:pfam12128 629 QANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNK------ALAERKDSANERLNSLEAQLKQL--DKKHQA 700
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 922 SLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAyenavsiLSRRLQESLTAKESAEAELSKL 1001
Cdd:pfam12128 701 WLEEQKEQKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKA-------LETWYKRDLASLGVDPDVIAKL 773
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1002 KAQITDggsnqiAQERIQALETELQAVRS-SKLMLEKELQEVISLTSQeLEEYREKVLELEDEL----QESRGFRRKIKR 1076
Cdd:pfam12128 774 KREIRT------LERKIERIAVRRQEVLRyFDWYQETWLQRRPRLATQ-LSNIERAISELQQQLarliADTKLRRAKLEM 846
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1077 LEEINKKLALELEHERGKLTGLSQSNAALREHNNV--LETALAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQAS 1154
Cdd:pfam12128 847 ERKASEKQQVRLSENLRGLRCEMSKLATLKEDANSeqAQGSIGERLAQLEDLKLKRDYLSESVKKYVEHFKNVIADHSGS 926
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
710-914 |
9.54e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 59.01 E-value: 9.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 710 KEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQ 789
Cdd:COG4942 25 AEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKE 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 790 EMA--IRSSQVENLQQENGSLKKQvqkvkEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVE 867
Cdd:COG4942 105 ELAelLRALYRLGRQPPLALLLSP-----EDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2024459673 868 KQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQ 914
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELE 226
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
623-1252 |
9.77e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 60.31 E-value: 9.77e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 623 MLDQEAAFMQIQEAKTMVEE--DLQRKLEEFEDEKEQLQKMADSAATLEQELDQV--------KLTLHQRDLQLESLQQE 692
Cdd:COG4913 217 MLEEPDTFEAADALVEHFDDleRAHEALEDAREQIELLEPIRELAERYAAARERLaeleylraALRLWFAQRRLELLEAE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 693 HLDLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDAtskddmIQYLQNEKIVLEVALQTAKASQDQLDEGTKR 772
Cdd:COG4913 297 LEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDR------LEQLEREIERLERELEERERRRARLEALLAA 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 773 LGEDTEVTSEILEQLRQEMAIRSSQVENLQQEngslkkqvqkVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDS 852
Cdd:COG4913 371 LGLPLPASAEEFAALRAEAAALLEALEEELEA----------LEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPA 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 853 EMKELKRELLQiqvekqsletehsKLQKEVTEVH--QQMVEIenhlqsvqKERDE-----METRLQSLQF----DKEQMA 921
Cdd:COG4913 441 RLLALRDALAE-------------ALGLDEAELPfvGELIEV--------RPEEErwrgaIERVLGGFALtllvPPEHYA 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 922 SLAEA----NQTLKLQVEQMQEEAKKAiteqkqKMKRLGSDLTSAQKEMKAkHKAYENAVSILSRRLqeSLTAKESAEaE 997
Cdd:COG4913 500 AALRWvnrlHLRGRLVYERVRTGLPDP------ERPRLDPDSLAGKLDFKP-HPFRAWLEAELGRRF--DYVCVDSPE-E 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 998 LSKLKAQITDGGsnQI------------------------AQERIQALETELQAvrssklmLEKELQEVISLTsQELEEY 1053
Cdd:COG4913 570 LRRHPRAITRAG--QVkgngtrhekddrrrirsryvlgfdNRAKLAALEAELAE-------LEEELAEAEERL-EALEAE 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1054 REKVLELEDELQESRGFRRKIKRLEEINKKLAlELEHErgkLTGLSQSNAALREhnnvLETALAKREADLVQLnlqvqav 1133
Cdd:COG4913 640 LDALQERREALQRLAEYSWDEIDVASAEREIA-ELEAE---LERLDASSDDLAA----LEEQLEELEAELEEL------- 704
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1134 lkrkEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVaaakadaahnrrhyrAAALELNEVKKELHAKELLVQALQaevdk 1213
Cdd:COG4913 705 ----EEELDELKGEIGRLEKELEQAEEELDELQDRL---------------EAAEDLARLELRALLEERFAAALG----- 760
|
650 660 670
....*....|....*....|....*....|....*....
gi 2024459673 1214 lqveDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSE 1252
Cdd:COG4913 761 ----DAVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
604-1285 |
1.56e-08 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 59.60 E-value: 1.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 604 RSIKEKERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRD 683
Cdd:TIGR00618 160 AKSKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQ 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 684 LQLESLQQEHldlmkqftMTQEMLHTKEQTLDDLQTQYDELK---ARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAK 760
Cdd:TIGR00618 240 QSHAYLTQKR--------EAQEEQLKKQQLLKQLRARIEELRaqeAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQR 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 761 ASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQK-VKEQFLQQKVMVEAYRRDASSKDQL 839
Cdd:TIGR00618 312 IHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATsIREISCQQHTLTQHIHTLQQQKTTL 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 840 ISELKATKKRLDSEMKELKRELLQIQ---VEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFD 916
Cdd:TIGR00618 392 TQKLQSLCKELDILQREQATIDTRTSafrDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKER 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 917 KEQMASLaeanQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAkhkAYENAVsiLSRRLQESLTAKESAEA 996
Cdd:TIGR00618 472 EQQLQTK----EQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQD---IDNPGP--LTRRMQRGEQTYAQLET 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 997 ELSKLKAQITDggsnqiAQERIQALETELQAVRSSKLMLEKELQEVisltSQELEEYREKVLELEDELQESRGFRRKikr 1076
Cdd:TIGR00618 543 SEEDVYHQLTS------ERKQRASLKEQMQEIQQSFSILTQCDNRS----KEDIPNLQNITVRLQDLTEKLSEAEDM--- 609
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1077 LEEINKKLALELEHERGKLTgLSQSNAALREHNNVLETALAKREADLVQLNLQVQAVLKRKEEEdqqmqQLIQALQASLE 1156
Cdd:TIGR00618 610 LACEQHALLRKLQPEQDLQD-VRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPK-----ELLASRQLALQ 683
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1157 KEKSKvkdlKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAEvdkLQVEDEKHSQEVSQFQQELAEAR 1236
Cdd:TIGR00618 684 KMQSE----KEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSD---LAAREDALNQSLKELMHQARTVL 756
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 2024459673 1237 SQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQKEREIGTLKQQLDMSE 1285
Cdd:TIGR00618 757 KARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLE 805
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
383-1108 |
3.37e-08 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 58.43 E-value: 3.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 383 QVLKEKMRLEGQLEALSAEANQAL---KEKAELQAQLAALNMKLQAQVEHsQSSQQKQESLSSEVATLKQSCWDLERAMA 459
Cdd:COG3096 286 RALELRRELFGARRQLAEEQYRLVemaRELEELSARESDLEQDYQAASDH-LNLVQTALRQQEKIERYQEDLEELTERLE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 460 DLQNTLEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSV---LTRDSTVHDLRQQLASLQSQLQKVQLERTTLTNKLK 536
Cdd:COG3096 365 EQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALdvqQTRAIQYQQAVQALEKARALCGLPDLTPENAEDYLA 444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 537 ASETEITSLQNVRQWYQQQLVLAQEAR----------VRLQSEMANIQAGQMTQAGVLEHLKLENVALSQQLTETQHRsi 606
Cdd:COG3096 445 AFRAKEQQATEEVLELEQKLSVADAARrqfekayelvCKIAGEVERSQAWQTARELLRRYRSQQALAQRLQQLRAQLA-- 522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 607 kEKERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVK---------- 676
Cdd:COG3096 523 -ELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRarikelaara 601
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 677 ---LTLHQRDLQLESLQQEHL----DLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQN-- 747
Cdd:COG3096 602 pawLAAQDALERLREQSGEALadsqEVTAAMQQLLEREREATVERDELAARKQALESQIERLSQPGGAEDPRLLALAErl 681
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 748 ---------EKIVLEVA------------------LQTAKASQDQLD---------EGTKRLGEDTEVTSEILE------ 785
Cdd:COG3096 682 ggvllseiyDDVTLEDApyfsalygparhaivvpdLSAVKEQLAGLEdcpedlyliEGDPDSFDDSVFDAEELEdavvvk 761
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 786 ----QLRQEM---------AIRSSQVENLQQENGSLKKQ-------VQKVK------EQFLQQKVMV------EAYRRDA 833
Cdd:COG3096 762 lsdrQWRYSRfpevplfgrAAREKRLEELRAERDELAEQyakasfdVQKLQrlhqafSQFVGGHLAVafapdpEAELAAL 841
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 834 SSKdqlISELKATKKRLDSEMKELKRELLQIQVEKQSL-----------ETEHSKLQKEVTEVHQQMVEIENHLQSVQKE 902
Cdd:COG3096 842 RQR---RSELERELAQHRAQEQQLRQQLDQLKEQLQLLnkllpqanllaDETLADRLEELREELDAAQEAQAFIQQHGKA 918
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 903 RDEMETRLQSLQFDKEQMASLAEANQtlklQVEQMQEEAKKAITEQKQKMKRLgsdltsaqkemkaKHKAYENAVSIL-- 980
Cdd:COG3096 919 LAQLEPLVAVLQSDPEQFEQLQADYL----QAKEQQRRLKQQIFALSEVVQRR-------------PHFSYEDAVGLLge 981
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 981 SRRLQESLTAK-ESAEAELSKLKAQI--TDGGSNQIAQERiQALETELQAVRSSKLMLEKELQEV-ISLTSQELEEYREK 1056
Cdd:COG3096 982 NSDLNEKLRARlEQAEEARREAREQLrqAQAQYSQYNQVL-ASLKSSRDAKQQTLQELEQELEELgVQADAEAEERARIR 1060
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*
gi 2024459673 1057 VLELEDELQESRGfrrkikRLEEINKKLAL---ELEHERGKLTGLSQSNAALREH 1108
Cdd:COG3096 1061 RDELHEELSQNRS------RRSQLEKQLTRceaEMDSLQKRLRKAERDYKQEREQ 1109
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
640-1244 |
9.63e-08 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 56.83 E-value: 9.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 640 VEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQEHLDLMKQFTMTQEMLHtKEQTLDDLQT 719
Cdd:PRK01156 174 VIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALN-ELSSLEDMKN 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 720 QYDElkaRLEEFQSDATSKDDMIQYLQN-EKIVLEVALQTAKASQDQLDEGTKRLGeDTEVTSEILEQLRQEMAIRSSQV 798
Cdd:PRK01156 253 RYES---EIKTAESDLSMELEKNNYYKElEERHMKIINDPVYKNRNYINDYFKYKN-DIENKKQILSNIDAEINKYHAII 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 799 ENLqQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKL 878
Cdd:PRK01156 329 KKL-SVLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAI 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 879 QKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLqfdKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSD 958
Cdd:PRK01156 408 KKELNEINVKLQDISSKVSSLNQRIRALRENLDEL---SRNMEMLNGQSVCPVCGTTLGEEKSNHIINHYNEKKSRLEEK 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 959 LTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQITDggsnqiaqeriqaLETELQAVRSSKLMLEKE 1038
Cdd:PRK01156 485 IREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARADLED-------------IKIKINELKDKHDKYEEI 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1039 LQEVISLTSQELEEYREKVLELEDELqESRGFRRKIKRLEEINKKLalelehergkltglsqsnaalrehnNVLETALAK 1118
Cdd:PRK01156 552 KNRYKSLKLEDLDSKRTSWLNALAVI-SLIDIETNRSRSNEIKKQL-------------------------NDLESRLQE 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1119 READLVQLNLQVQAVLKRKEEEDQQMQ---QLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRhyraAALELNEVKK 1195
Cdd:PRK01156 606 IEIGFPDDKSYIDKSIREIENEANNLNnkyNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKE----ITSRINDIED 681
|
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 2024459673 1196 ELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQK 1244
Cdd:PRK01156 682 NLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINETLESMKK 730
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
852-1295 |
1.22e-07 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 56.29 E-value: 1.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 852 SEMKELKRELLQIQVEKQSLETEH-----------SKLQKEVTEVHQQMVEIENHLQSVQKERDEMET-------RLQSL 913
Cdd:pfam05557 2 AELIESKARLSQLQNEKKQMELEHkrarielekkaSALKRQLDRESDRNQELQKRIRLLEKREAEAEEalreqaeLNRLK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 914 QFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAYEnavsILSRRLQESLTAKES 993
Cdd:pfam05557 82 KKYLEALNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLD----LLKAKASEAEQLRQN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 994 AEAELSKLKAqitdggsnqiAQERIQALETELQAVRSSKLMLEKELQEVISLTSQE------------LEEYREKVLELE 1061
Cdd:pfam05557 158 LEKQQSSLAE----------AEQRIKELEFEIQSQEQDSEIVKNSKSELARIPELEkelerlrehnkhLNENIENKLLLK 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1062 DELQesrGFRRKIKRLEEINKKLA---LELEHERGKLTGLSQSNAALREHNNVLETA------LAKREADLVQLNLQVQA 1132
Cdd:pfam05557 228 EEVE---DLKRKLEREEKYREEAAtleLEKEKLEQELQSWVKLAQDTGLNLRSPEDLsrrieqLQQREIVLKEENSSLTS 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1133 VLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQV---AAAKADAAHNRRHYRAAaleLNEVKKELHAKELLVQALQA 1209
Cdd:pfam05557 305 SARQLEKARRELEQELAQYLKKIEDLNKKLKRHKALVrrlQRRVLLLTKERDGYRAI---LESYDKELTMSNYSPQLLER 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1210 E------VDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDK-----LSEQPLVSQEVEDLKWEVEQKEREIGTLK 1278
Cdd:pfam05557 382 IeeaedmTQKMQAHNEEMEAQLSVAEEELGGYKQQAQTLERELQALrqqesLADPSYSKEEVDSLRRKLETLELERQRLR 461
|
490
....*....|....*...
gi 2024459673 1279 QQLDMSEQR-SHKELEGM 1295
Cdd:pfam05557 462 EQKNELEMElERRCLQGD 479
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
753-1155 |
1.24e-07 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 56.46 E-value: 1.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 753 EVALQTAKASQDQLDEGTKRlgEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQFLQQKvmveayrrd 832
Cdd:PRK11281 32 NGDLPTEADVQAQLDALNKQ--KLLEAEDKLVQQDLEQTLALLDKIDRQKEETEQLKQQLAQAPAKLRQAQ--------- 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 833 asskdqliSELKATKKRLDSEMKElkrellqiQVEKQSLETehskLQKEVTEVHQQmveienhLQSVQKERDEMETRLQS 912
Cdd:PRK11281 101 --------AELEALKDDNDEETRE--------TLSTLSLRQ----LESRLAQTLDQ-------LQNAQNDLAEYNSQLVS 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 913 LQFDKEQMASLAEANQTlklqveQMQEeakkaITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTake 992
Cdd:PRK11281 154 LQTQPERAQAALYANSQ------RLQQ-----IRNLLKGGKVGGKALRPSQRVLLQAEQALLNAQNDLQRKSLEGNT--- 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 993 saeaelsklkaQITDGGSNQ--IAQERIQALETELQAvrssklmlekeLQEVISltSQELEEYREKVLELE--DELQESR 1068
Cdd:PRK11281 220 -----------QLQDLLQKQrdYLTARIQRLEHQLQL-----------LQEAIN--SKRLTLSEKTVQEAQsqDEAARIQ 275
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1069 GfrrkikrleeiNKKLALELEHERGkltgLSQSNAALREHNNVLetalakreadlVQLNLQVQAVLKRKEEEDQQMQQLI 1148
Cdd:PRK11281 276 A-----------NPLVAQELEINLQ----LSQRLLKATEKLNTL-----------TQQNLRVKNWLDRLTQSERNIKEQI 329
|
....*..
gi 2024459673 1149 QALQASL 1155
Cdd:PRK11281 330 SVLKGSL 336
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
710-1264 |
1.36e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 56.59 E-value: 1.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 710 KEQTLDDLQTQYDE-----LKARLEEFQSDATSKDDMIQYLQNEKivlEVALQTAKASQDQLDEGTKRLGEDTEVTSEIl 784
Cdd:PRK02224 185 QRGSLDQLKAQIEEkeekdLHERLNGLESELAELDEEIERYEEQR---EQARETRDEADEVLEEHEERREELETLEAEI- 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 785 EQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQI 864
Cdd:PRK02224 261 EDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAH 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 865 QVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQfdkEQMASLAEANQTLKLQVEQMqEEAKKA 944
Cdd:PRK02224 341 NEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELE---EEIEELRERFGDAPVDLGNA-EDFLEE 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 945 ITEQKqkmkrlgSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQITDggsnqiAQERIQALETE 1024
Cdd:PRK02224 417 LREER-------DELREREAELEATLRTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEE------DRERVEELEAE 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1025 LQavrssklmlekelqevisltsqELEEYREKVLELEDELQESRGFRRKIKRLEEINKKLALELEHERGKLTGLSQSNAA 1104
Cdd:PRK02224 484 LE----------------------DLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEE 541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1105 LREHNNVLETALAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQA--SLEKEKSKVKDLKEQVAaakadaahNRRH 1182
Cdd:PRK02224 542 LRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESleRIRTLLAAIADAEDEIE--------RLRE 613
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1183 YRAAALELNEVKKE-LHAKELLVQALQAEVDKLQVEDEKhsQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVE 1261
Cdd:PRK02224 614 KREALAELNDERRErLAEKRERKRELEAEFDEARIEEAR--EDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELE 691
|
...
gi 2024459673 1262 DLK 1264
Cdd:PRK02224 692 ELE 694
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
507-1040 |
1.69e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 55.88 E-value: 1.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 507 VHDLRQQLASLQSQLQKVQLERTTLTNKLKASETEITSLQNVRQWYQQQLVLAQEARVRLQSEMANI----QAGQMTQAG 582
Cdd:pfam05483 235 INDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIkmslQRSMSTQKA 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 583 VLEHLKLEnvalsqqlTETQHRSIKEKEriaAQLQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMA 662
Cdd:pfam05483 315 LEEDLQIA--------TKTICQLTEEKE---AQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIIT 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 663 DSAATLEQELDQVKLTLHQRDLQLESLQ------QEHLDLMKQFTMTQEMLHTKEQTLDDLqTQYDELKARLEEFQSDAT 736
Cdd:pfam05483 384 MELQKKSSELEEMTKFKNNKEVELEELKkilaedEKLLDEKKQFEKIAEELKGKEQELIFL-LQAREKEIHDLEIQLTAI 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 737 SKDDmiQYLQNEKIVLEVALQTAKASQDQLDEGTKRLG-EDTEVTSE----ILEQLRQEMAIRSS---------QVENLQ 802
Cdd:pfam05483 463 KTSE--EHYLKEVEDLKTELEKEKLKNIELTAHCDKLLlENKELTQEasdmTLELKKHQEDIINCkkqeermlkQIENLE 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 803 QENGSLKKQVQKVKEQFLQQKVMVEAyRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSletehsklqKEV 882
Cdd:pfam05483 541 EKEMNLRDELESVREEFIQKGDEVKC-KLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKN---------KNI 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 883 TEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDkeqmasLAEANQTLKLQVEQMQEEAK-KAITEQK-----QKMKRLG 956
Cdd:pfam05483 611 EELHQENKALKKKGSAENKQLNAYEIKVNKLELE------LASAKQKFEEIIDNYQKEIEdKKISEEKlleevEKAKAIA 684
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 957 SDLTSAQKEM--KAKHKAYEnAVSILSRRLQESLTAKESAEAELSKLKAQITDGGSNQIAqeriqaLETELQAVRSSKLM 1034
Cdd:pfam05483 685 DEAVKLQKEIdkRCQHKIAE-MVALMEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKAA------LEIELSNIKAELLS 757
|
....*.
gi 2024459673 1035 LEKELQ 1040
Cdd:pfam05483 758 LKKQLE 763
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
773-1340 |
1.80e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 56.13 E-value: 1.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 773 LGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAyrrdASSKDQLISELKATKKRLDS 852
Cdd:TIGR00618 199 LTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEE----QLKKQQLLKQLRARIEELRA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 853 EMKELkrELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKL 932
Cdd:TIGR00618 275 QEAVL--EETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHS 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 933 QVEQMQEEAKKA--ITEQKQKMKRLGSDLtSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQITDGGS 1010
Cdd:TIGR00618 353 QEIHIRDAHEVAtsIREISCQQHTLTQHI-HTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKK 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1011 NQIAQERIQALEtelqavrssKLMLEKELQEVIsLTSQELEEYREKVLELEDELQESRGFRRKIKRLEEINKKLALELEH 1090
Cdd:TIGR00618 432 QQELQQRYAELC---------AAAITCTAQCEK-LEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQE 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1091 ERGKLTG-LSQSNAALREHNNV---------LETALAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQAsLEKEKS 1160
Cdd:TIGR00618 502 EPCPLCGsCIHPNPARQDIDNPgpltrrmqrGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSI-LTQCDN 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1161 KVKDLKEQVAAAKADAAHnrrhyraaalelnEVKKELHAKELLVQALQAEVDKLQVE--DEKHSQEVSQFQQELAEARSQ 1238
Cdd:TIGR00618 581 RSKEDIPNLQNITVRLQD-------------LTEKLSEAEDMLACEQHALLRKLQPEqdLQDVRLHLQQCSQELALKLTA 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1239 LQLLQKKL-DDKLSEQPLVSQEVEDLKWE-VEQKEREIGTLKQQLDMSEQRSHKELEGMQVVLQNIKTELEVVREDLSVT 1316
Cdd:TIGR00618 648 LHALQLTLtQERVREHALSIRVLPKELLAsRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENAS 727
|
570 580
....*....|....*....|....
gi 2024459673 1317 QKDKFMLQAKVSELKNSMKSLLQQ 1340
Cdd:TIGR00618 728 SSLGSDLAAREDALNQSLKELMHQ 751
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
642-1041 |
4.38e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 54.39 E-value: 4.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 642 EDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQehldlMKQFTMTQEMLHTKEQTLDDLQTQY 721
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEK-----LLQLLPLYQELEALEAELAELPERL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 722 DELKARLEEFQSD-----------ATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQE 790
Cdd:COG4717 149 EELEERLEELRELeeeleeleaelAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEE 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 791 MAIRSSQVENLQQEngslkKQVQKVKEQFLQQKVMVEAYRRDASSKDQ-----------------LISELKATKKRLDSE 853
Cdd:COG4717 229 LEQLENELEAAALE-----ERLKEARLLLLIAAALLALLGLGGSLLSLiltiagvlflvlgllalLFLLLAREKASLGKE 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 854 MKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQK---ERDEMETRLQSLQFDKEQMASLAEANQTL 930
Cdd:COG4717 304 AEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQEllrEAEELEEELQLEELEQEIAALLAEAGVED 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 931 KLQVEQMQEEAKKAItEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVsiLSRRLQESLTAKESAEAELSKLKAQITDggs 1010
Cdd:COG4717 384 EEELRAALEQAEEYQ-ELKEELEELEEQLEELLGELEELLEALDEEE--LEEELEELEEELEELEEELEELREELAE--- 457
|
410 420 430
....*....|....*....|....*....|...
gi 2024459673 1011 nqiAQERIQALET--ELQAVRSSKLMLEKELQE 1041
Cdd:COG4717 458 ---LEAELEQLEEdgELAELLQELEELKAELRE 487
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
691-1079 |
4.88e-07 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 54.96 E-value: 4.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 691 QEHLDLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEvalQTAKASQDqLDEGT 770
Cdd:PRK04863 286 EEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTALRQQE---KIERYQAD-LEELE 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 771 KRLGEDTEVTSEILEQLrqemAIRSSQVENLQQENGSLKKQVQKVKEQFLQQKVM-------VEAYRR----------DA 833
Cdd:PRK04863 362 ERLEEQNEVVEEADEQQ----EENEARAEAAEEEVDELKSQLADYQQALDVQQTRaiqyqqaVQALERakqlcglpdlTA 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 834 SSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQmveiENHLQSVQKERDEMETRLQSL 913
Cdd:PRK04863 438 DNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQLVRKIAGEVSRS----EAWDVARELLRRLREQRHLAE 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 914 QFDKEQMAsLAEANQTLKLQ--VEQMQEEAKkaiteqkqkmKRLGSDLTSAQkEMKAKHKAYENAVSILSRRLQESLTAK 991
Cdd:PRK04863 514 QLQQLRMR-LSELEQRLRQQqrAERLLAEFC----------KRLGKNLDDED-ELEQLQEELEARLESLSESVSEARERR 581
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 992 ESAEAELSKLKAQItdggsnqiaqERIQALETELQAVRSSKLMLEKELQEVIsLTSQELEEYREKVLELEDELQESR-GF 1070
Cdd:PRK04863 582 MALRQQLEQLQARI----------QRLAARAPAWLAAQDALARLREQSGEEF-EDSQDVTEYMQQLLERERELTVERdEL 650
|
....*....
gi 2024459673 1071 RRKIKRLEE 1079
Cdd:PRK04863 651 AARKQALDE 659
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
590-928 |
5.74e-07 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 54.36 E-value: 5.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 590 ENVALSQQLTETQHRSIKEKERIAAQLQNIEADMLDQEaafmqiqEAKTMVEEDLQRKLEEFEDEKeqlQKMADSAATLE 669
Cdd:pfam17380 267 ENEFLNQLLHIVQHQKAVSERQQQEKFEKMEQERLRQE-------KEEKAREVERRRKLEEAEKAR---QAEMDRQAAIY 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 670 QELDQVKLtlhQRDLQLESLQQE----HLDLMKQFTMTQEMLHTKEqtLDDLQTQYDELKARLEefQSDATSKDDMIQYL 745
Cdd:pfam17380 337 AEQERMAM---ERERELERIRQEerkrELERIRQEEIAMEISRMRE--LERLQMERQQKNERVR--QELEAARKVKILEE 409
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 746 QNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENL-QQENGSLKKQVQKVKEQflQQKV 824
Cdd:pfam17380 410 ERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVERLrQQEEERKRKKLELEKEK--RDRK 487
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 825 MVEAYRRDASSKdqlisELKATKKRLDSEmkELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKER- 903
Cdd:pfam17380 488 RAEEQRRKILEK-----ELEERKQAMIEE--ERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRk 560
|
330 340
....*....|....*....|....*.
gi 2024459673 904 -DEMETRLQSLQFDKEQMASLAEANQ 928
Cdd:pfam17380 561 aTEERSRLEAMEREREMMRQIVESEK 586
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
828-1266 |
5.87e-07 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 54.52 E-value: 5.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 828 AYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETehsklqkeVTEVHQQMVEIENHLQSVQKERDEme 907
Cdd:PLN02939 37 ARRRGFSSQQKKKRGKNIAPKQRSSNSKLQSNTDENGQLENTSLRT--------VMELPQKSTSSDDDHNRASMQRDE-- 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 908 trlQSLQFDKEQMASLAEANQTLKLQVEQmqeeakkaiteqkqkmkrLGSDLTSAQKEMKAKHKAYENAVSilsrRLQES 987
Cdd:PLN02939 107 ---AIAAIDNEQQTNSKDGEQLSDFQLED------------------LVGMIQNAEKNILLLNQARLQALE----DLEKI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 988 LTAKESAEAELSKLKAQI--TDGGSNQIAQERIQA--LETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLELEDE 1063
Cdd:PLN02939 162 LTEKEALQGKINILEMRLseTDARIKLAAQEKIHVeiLEEQLEKLRNELLIRGATEGLCVHSLSKELDVLKEENMLLKDD 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1064 LQesrGFRRKIKRLEEINKKLALeLEHERGKLtglsqsNAALREhnnvLETALAKREADLVQLN-LQVQAVLKRkeeedq 1142
Cdd:PLN02939 242 IQ---FLKAELIEVAETEERVFK-LEKERSLL------DASLRE----LESKFIVAQEDVSKLSpLQYDCWWEK------ 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1143 qmqqlIQALQASLEKEKSKVKdlKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAK-ELLVQALQAEVDKLQVEDEKH 1221
Cdd:PLN02939 302 -----VENLQDLLDRATNQVE--KAALVLDQNQDLRDKVDKLEASLKEANVSKFSSYKvELLQQKLKLLEERLQASDHEI 374
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 2024459673 1222 SQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPlvsqeVEDLKWE 1266
Cdd:PLN02939 375 HSYIQLYQESIKEFQDTLSKLKEESKKRSLEHP-----ADDMPSE 414
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
509-748 |
7.32e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.23 E-value: 7.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 509 DLRQQLASLQSQLQKVQLERTTLTNKLKASETEITSLQNVRQWYQQQLVLAQEARVRLQSEMANIQAGQMTQAGvlehlk 588
Cdd:COG4942 31 QLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKE------ 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 589 lenvALSQQLTETQHRSIKEKERIAAQLQNIeADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATL 668
Cdd:COG4942 105 ----ELAELLRALYRLGRQPPLALLLSPEDF-LDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 669 EQELDQVKltlhqrdLQLESLQQEhldlmkqftmtqemlhtKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNE 748
Cdd:COG4942 180 LAELEEER-------AALEALKAE-----------------RQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
785-1347 |
1.16e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.61 E-value: 1.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 785 EQLRQEMAIRSSQvENLQQENGSLKKQVQKVKE-QFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQ 863
Cdd:PTZ00121 1185 EEVRKAEELRKAE-DARKAEAARKAEEERKAEEaRKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMA 1263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 864 IQVEKQS-LETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQfDKEQMASLAEANQTLKLQVEQMQEEAK 942
Cdd:PTZ00121 1264 HFARRQAaIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAK-KADEAKKKAEEAKKKADAAKKKAEEAK 1342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 943 KAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAvsilsRRLQESLT--AKESAEAELSKLKAQitdgGSNQIAQERIQA 1020
Cdd:PTZ00121 1343 KAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEA-----KKKADAAKkkAEEKKKADEAKKKAE----EDKKKADELKKA 1413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1021 LETELQAVRSSKLMLEKELQEVISLTSQEleeyREKVLELEDELQESRGFRRKIKRLEEINKKLALELEHERGKLTGLSQ 1100
Cdd:PTZ00121 1414 AAAKKKADEAKKKAEEKKKADEAKKKAEE----AKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAK 1489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1101 SNA--ALREHNNVLETALAKREAD-LVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAA 1177
Cdd:PTZ00121 1490 KKAeeAKKKADEAKKAAEAKKKADeAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEA 1569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1178 HNRRHYRAAALELNEVKKELHAKEL-LVQALQAEVDKLQVEDEKHSQEVSQFQQEL---AEARSQLQLLQKKLDDKLSEQ 1253
Cdd:PTZ00121 1570 KKAEEDKNMALRKAEEAKKAEEARIeEVMKLYEEEKKMKAEEAKKAEEAKIKAEELkkaEEEKKKVEQLKKKEAEEKKKA 1649
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1254 PLVSQEVEDLKWEVEQKER----------EIGTLKQQLDMSEQRSHKELEGMQVVLQNIKTELEVVREDLSVtQKDKFML 1323
Cdd:PTZ00121 1650 EELKKAEEENKIKAAEEAKkaeedkkkaeEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEEL-KKAEEEN 1728
|
570 580
....*....|....*....|....
gi 2024459673 1324 QAKVSELKNSMKSLLQQNQQLKMD 1347
Cdd:PTZ00121 1729 KIKAEEAKKEAEEDKKKAEEAKKD 1752
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
699-1344 |
1.27e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 53.51 E-value: 1.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 699 QFTMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEkivLEVALQTAKASQDQLDEGTKRLGEDTE 778
Cdd:TIGR00606 183 RYIKALETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQ---LESSREIVKSYENELDPLKNRLKEIEH 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 779 VTSEILEqlrqemairssqVENLQQENGSLKKQVQKVKEQFlqQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELK 858
Cdd:TIGR00606 260 NLSKIMK------------LDNEIKALKSRKKQMEKDNSEL--ELKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDCQ 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 859 RELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLaEANQTLKLQVEQMQ 938
Cdd:TIGR00606 326 RELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSER-QIKNFHTLVIERQE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 939 EEAKKAiteqKQKMKRLGSDLTSAQKEMKAkhkaYENAVSILSRRLQeslTAKESAEAELSKLKAQITDGGSNQIAQERI 1018
Cdd:TIGR00606 405 DEAKTA----AQLCADLQSKERLKQEQADE----IRDEKKGLGRTIE---LKKEILEKKQEELKFVIKELQQLEGSSDRI 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1019 QALETELQAVRSSKLMLEKE------LQEVISLTSQELEEYREKVlELEDELQESRGFRRKIKRLEEINKKLALELEHER 1092
Cdd:TIGR00606 474 LELDQELRKAERELSKAEKNsltetlKKEVKSLQNEKADLDRKLR-KLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIR 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1093 -------GKLTG----------LSQSNAALREHNNVLETALAKRE---ADLVQLNLQVQAVLKRKEEEDQQMQQLI---- 1148
Cdd:TIGR00606 553 kiksrhsDELTSllgyfpnkkqLEDWLHSKSKEINQTRDRLAKLNkelASLEQNKNHINNELESKEEQLSSYEDKLfdvc 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1149 --QALQASLEKEKSKVKDLKEQVAAAKADAAHN------------------RRHYRAAAlELNEVKKELHAKELLVQALQ 1208
Cdd:TIGR00606 633 gsQDEESDLERLKEEIEKSSKQRAMLAGATAVYsqfitqltdenqsccpvcQRVFQTEA-ELQEFISDLQSKLRLAPDKL 711
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1209 AEVDKLQVEDEKHSQEVSQfqqeLAEAR-SQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQKEREIGTLKQQ------- 1280
Cdd:TIGR00606 712 KSTESELKKKEKRRDEMLG----LAPGRqSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEeesakvc 787
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1281 --------------------------------LDMSEQRSHKELEGMQVVLQNIKTELEVVREDLSVTQKDKFMLQAKVS 1328
Cdd:TIGR00606 788 ltdvtimerfqmelkdverkiaqqaaklqgsdLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTN 867
|
730
....*....|....*....
gi 2024459673 1329 ELKNSMKSL---LQQNQQL 1344
Cdd:TIGR00606 868 ELKSEKLQIgtnLQRRQQF 886
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
533-959 |
1.33e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 52.85 E-value: 1.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 533 NKLKASETEITSLQNVRQWYQQQLVLAQEARVRLQSEMAniqagQMTQAGVLEHLKLENVALSQQLTETQHRSIKEKERI 612
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELREELE-----KLEKLLQLLPLYQELEALEAELAELPERLEELEERL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 613 AaQLQNIEADMLDQEAAFMQIQEAKTMVEEDL-QRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQ 691
Cdd:COG4717 156 E-ELRELEEELEELEAELAELQEELEELLEQLsLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLEN 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 692 EHLDLMKQFTMTQEMLHTKEQT-----LDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQL 766
Cdd:COG4717 235 ELEAAALEERLKEARLLLLIAAallalLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALE 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 767 DEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKAT 846
Cdd:COG4717 315 ELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQA 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 847 KKR--LDSEMKELKRELL----------------QIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKER--DEM 906
Cdd:COG4717 395 EEYqeLKEELEELEEQLEellgeleellealdeeELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGelAEL 474
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2024459673 907 ETRLQSLqfdKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDL 959
Cdd:COG4717 475 LQELEEL---KAELRELAEEWAALKLALELLEEAREEYREERLPPVLERASEY 524
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
795-1005 |
1.49e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.07 E-value: 1.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 795 SSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETE 874
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 875 HSKLQKEVTEVHQQMVEIENH----LQSVQKERDEMETRLQSL----QFDKEQMASLAEANQTLKlQVEQMQEEAKKAIT 946
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQpplaLLLSPEDFLDAVRRLQYLkylaPARREQAEELRADLAELA-ALRAELEAERAELE 177
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2024459673 947 EQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQI 1005
Cdd:COG4942 178 ALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
662-902 |
1.66e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.07 E-value: 1.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 662 ADSAATLEQELDQVKLTLHQRDLQLESLQQEHLDLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDM 741
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 742 IQYLQNEKIVLEVALQTAkASQDQLDEGTKrlGEDTEVTSEILEQLRQEMAIRSSQVENLQQEngslKKQVQKVKEQFLQ 821
Cdd:COG4942 99 LEAQKEELAELLRALYRL-GRQPPLALLLS--PEDFLDAVRRLQYLKYLAPARREQAEELRAD----LAELAALRAELEA 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 822 QKvmveayrrdaSSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQK 901
Cdd:COG4942 172 ER----------AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
.
gi 2024459673 902 E 902
Cdd:COG4942 242 R 242
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
851-1419 |
1.78e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 52.72 E-value: 1.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 851 DSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRL------------------QS 912
Cdd:TIGR04523 32 DTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLkknkdkinklnsdlskinSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 913 LQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLgSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKE 992
Cdd:TIGR04523 112 IKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKEL-EKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNID 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 993 SAEAELSKLKAQITDGGSNQIAQERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLELEDELQE-SRGFR 1071
Cdd:TIGR04523 191 KIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKiKKQLS 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1072 RKIKRLEEINKKlalelehergkltgLSQSNAALREHNNVLETALAKREADlvqLNLQVQAVLKRKEEEDQQMQQLIQAL 1151
Cdd:TIGR04523 271 EKQKELEQNNKK--------------IKELEKQLNQLKSEISDLNNQKEQD---WNKELKSELKNQEKKLEEIQNQISQN 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1152 QASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQE 1231
Cdd:TIGR04523 334 NKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQ 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1232 LAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQKEREIGTLKQQLDMSEQrshkELEGMQVVLQNIKTELEVVRE 1311
Cdd:TIGR04523 414 IKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLET----QLKVLSRSINKIKQNLEQKQK 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1312 DLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQLKMDLKHGKMKKRKGENNSSNpvtpvkipdcpvpaaLLEELLKPSTAV 1391
Cdd:TIGR04523 490 ELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISD---------------LEDELNKDDFEL 554
|
570 580 590
....*....|....*....|....*....|..
gi 2024459673 1392 SKEPLK----NLNSCLRQLKQEMDSLQRQMEE 1419
Cdd:TIGR04523 555 KKENLEkeidEKNKEIEELKQTQKSLKKKQEE 586
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
781-1085 |
1.80e-06 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 52.62 E-value: 1.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 781 SEILEQLRQEMAIrssQVENLQQENGSLKkqVQKVKEqfLQQKVMveayrrDASSKDQLISELKATKKRLDSEMKELKRE 860
Cdd:PRK05771 19 DEVLEALHELGVV---HIEDLKEELSNER--LRKLRS--LLTKLS------EALDKLRSYLPKLNPLREEKKKVSVKSLE 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 861 LLQiqvekQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMEtRLQSLQFDkeqmASLAEANQTLKLQVEQMQEE 940
Cdd:PRK05771 86 ELI-----KDVEEELEKIEKEIKELEEEISELENEIKELEQEIERLE-PWGNFDLD----LSLLLGFKYVSVFVGTVPED 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 941 AKKAITEQkqkmkrlgSDLTSAQKEMKAKHKAYenaVSILSRRLQESLTAKESAEAELSKLkaQITDGGSnqiAQERIQA 1020
Cdd:PRK05771 156 KLEELKLE--------SDVENVEYISTDKGYVY---VVVVVLKELSDEVEEELKKLGFERL--ELEEEGT---PSELIRE 219
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024459673 1021 LETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLELEDELQESRGFRR--------------KIKRLEEINKKLA 1085
Cdd:PRK05771 220 IKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELERAEALSKFLKtdktfaiegwvpedRVKKLKELIDKAT 298
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
649-861 |
2.18e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.69 E-value: 2.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 649 EEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQEHLDLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARL 728
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 729 EEfQSDATSKDDMIQYLQNEKIVLEVALQTAKASQ--------DQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVEN 800
Cdd:COG4942 100 EA-QKEELAELLRALYRLGRQPPLALLLSPEDFLDavrrlqylKYLAPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024459673 801 LQQENGSLKKQVQKVKEqflQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKREL 861
Cdd:COG4942 179 LLAELEEERAALEALKA---ERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
|
| Filament |
pfam00038 |
Intermediate filament protein; |
852-1089 |
2.42e-06 |
|
Intermediate filament protein;
Pssm-ID: 459643 [Multi-domain] Cd Length: 313 Bit Score: 51.07 E-value: 2.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 852 SEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQ-------QMVEIENHLQSVQKERDE-------METRLQSLQFDK 917
Cdd:pfam00038 54 KEIEDLRRQLDTLTVERARLQLELDNLRLAAEDFRQkyedelnLRTSAENDLVGLRKDLDEatlarvdLEAKIESLKEEL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 918 EQMASL--AEANQTLK-LQVEQMQEEAKKAiteqkqkmkrLGSDLTSAQKEMKAKH-----KAYENAVSILSRRLQESLT 989
Cdd:pfam00038 134 AFLKKNheEEVRELQAqVSDTQVNVEMDAA----------RKLDLTSALAEIRAQYeeiaaKNREEAEEWYQSKLEELQQ 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 990 AKESAEAELSKLKAQITDggsnqiAQERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLELEDELQESRG 1069
Cdd:pfam00038 204 AAARNGDALRSAKEEITE------LRRTIQSLEIELQSLKKQKASLERQLAETEERYELQLADYQELISELEAELQETRQ 277
|
250 260
....*....|....*....|..
gi 2024459673 1070 -FRRKIKRLEEI-NKKLALELE 1089
Cdd:pfam00038 278 eMARQLREYQELlNVKLALDIE 299
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
406-1099 |
2.44e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 52.28 E-value: 2.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 406 LKEKAELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVATLKQscwdLERAMADLQNTLEAKNaslassnndlqlaeeq 485
Cdd:TIGR00618 228 LKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEE----LRAQEAVLEETQERIN---------------- 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 486 YQRLMLKVEDMQKSVLTRDstvHDLRQQLASLQSQLQKVQLERTTLTNKLKASETEITSLQNVRQWYQQQLVLAQEARVr 565
Cdd:TIGR00618 288 RARKAAPLAAHIKAVTQIE---QQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEV- 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 566 lqsemaniqagqmtQAGVLEHlklenvaLSQQLTETQH-RSIKEKERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEEDL 644
Cdd:TIGR00618 364 --------------ATSIREI-------SCQQHTLTQHiHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDL 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 645 QRKLEEFEDEKEQLQKmadSAATLEQELDQVKLTLHQRDLQLESLQQEhLDLMKQFTMTQEMLHTKEQTLDDLQTQYDEL 724
Cdd:TIGR00618 423 QGQLAHAKKQQELQQR---YAELCAAAITCTAQCEKLEKIHLQESAQS-LKEREQQLQTKEQIHLQETRKKAVVLARLLE 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 725 KARLEEFQSDATSKDDMIQYLQNEKIVLEVALQtakasqdQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQE 804
Cdd:TIGR00618 499 LQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQ-------RGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQS 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 805 NGSLKKQVQKVKEQFLQQKVMVEAYR----RDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEkQSLETEHSKLQK 880
Cdd:TIGR00618 572 FSILTQCDNRSKEDIPNLQNITVRLQdlteKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCS-QELALKLTALHA 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 881 EVTEVHQQMVEI---------ENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQVEQMQ---EEAKKAITEQ 948
Cdd:TIGR00618 651 LQLTLTQERVREhalsirvlpKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDrefNEIENASSSL 730
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 949 KQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQITDggSNQIAQERIQALETELQAV 1028
Cdd:TIGR00618 731 GSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQF--FNRLREEDTHLLKTLEAEI 808
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024459673 1029 RSSKLMLEKELQEVISLTSQELEEYREKVLELEDELQEsrgFRRKIKRLEEINKKLAlELEHERGKLTGLS 1099
Cdd:TIGR00618 809 GQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGE---ITHQLLKYEECSKQLA-QLTQEQAKIIQLS 875
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
891-1440 |
2.63e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 51.94 E-value: 2.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 891 EIENHLQSVQKERDEMETRLQSLQFD-KEQMASLAEANQTLKLqVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAK 969
Cdd:TIGR04523 37 QLEKKLKTIKNELKNKEKELKNLDKNlNKDEEKINNSNNKIKI-LEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKND 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 970 HKAyenavsilsrrlqesltaKESAEAELSKLKAQITDGGSNQIA-QERIQALETELQAVRSSKLMLEKELQEVisltSQ 1048
Cdd:TIGR04523 116 KEQ------------------KNKLEVELNKLEKQKKENKKNIDKfLTEIKKKEKELEKLNNKYNDLKKQKEEL----EN 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1049 ELEEYREKVLELEDELQESRGFRRK-------IKRLEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALAKREA 1121
Cdd:TIGR04523 174 ELNLLEKEKLNIQKNIDKIKNKLLKlelllsnLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQT 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1122 DLVQL---NLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQvaaakadaahnrrhyrAAALELNEVKKELH 1198
Cdd:TIGR04523 254 QLNQLkdeQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQ----------------KEQDWNKELKSELK 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1199 AKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQKEREIGTLK 1278
Cdd:TIGR04523 318 NQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLE 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1279 QQLDMSEQRShkelegmqvvlQNIKTELEVVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQLKMDLKHGKMKKRKG 1358
Cdd:TIGR04523 398 SKIQNQEKLN-----------QQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESL 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1359 ENNSSNPVTPVKIPDcpvpaALLEELLKPSTAVSKEpLKNLNSCLRQLKQEMDSLQRQMEEHTITVHESMSSWTQIEEQL 1438
Cdd:TIGR04523 467 ETQLKVLSRSINKIK-----QNLEQKQKELKSKEKE-LKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKI 540
|
..
gi 2024459673 1439 MD 1440
Cdd:TIGR04523 541 SD 542
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
860-1357 |
3.93e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 51.76 E-value: 3.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 860 ELLQIQVEKQSLETEHSKLQkevtEVHQQMVEIENHLQSVQKERDEMETRLQSL--QFDKEQMASLAEANQTLKLQVEQM 937
Cdd:pfam12128 242 EFTKLQQEFNTLESAELRLS----HLHFGYKSDETLIASRQEERQETSAELNQLlrTLDDQWKEKRDELNGELSAADAAV 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 938 Q--EEAKKAITEQKQKMKRLGSDLTSAQKEMKakhKAYENAVSILSRRLQESLTAKESAEAELSKLKAQITDGGSNQIA- 1014
Cdd:pfam12128 318 AkdRSELEALEDQHGAFLDADIETAAADQEQL---PSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAg 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1015 --QERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLELEDELQESRGFRRKIKRLEEINKKLAL---ELE 1089
Cdd:pfam12128 395 ikDKLAKIREARDRQLAVAEDDLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLENfdeRIE 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1090 HERGKLTglsQSNAALREHNNVLETALAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQV 1169
Cdd:pfam12128 475 RAREEQE---AANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQSI 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1170 AAAKADAAHNRRHYRAaalelnEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEvsQFQQELAEARSQLQLLQKKLDDK 1249
Cdd:pfam12128 552 GKVISPELLHRTDLDP------EVWDGSVGGELNLYGVKLDLKRIDVPEWAASEE--ELRERLDKAEEALQSAREKQAAA 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1250 LSEQPLVSQEVEDLKWEVEQKEREIgtlkQQLDMSEQRSHKELEGMQVVLQNIKTElevvREDLSVTQKDKFMLQAKVse 1329
Cdd:pfam12128 624 EEQLVQANGELEKASREETFARTAL----KNARLDLRRLFDEKQSEKDKKNKALAE----RKDSANERLNSLEAQLKQ-- 693
|
490 500
....*....|....*....|....*...
gi 2024459673 1330 LKNSMKSLLQQNQQLKMDLKHGKMKKRK 1357
Cdd:pfam12128 694 LDKKHQAWLEEQKEQKREARTEKQAYWQ 721
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
390-575 |
4.46e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.45 E-value: 4.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 390 RLEGQLEALSAEANQALKEKAELQAQLAALNMKLQAqvehsqssqqkqeslsseVATLKQSCWD------LERAMADLQN 463
Cdd:COG4913 614 ALEAELAELEEELAEAEERLEALEAELDALQERREA------------------LQRLAEYSWDeidvasAEREIAELEA 675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 464 TLEAknasLASSNNDLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQSQLQKVQ-----------LERTTLT 532
Cdd:COG4913 676 ELER----LDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQdrleaaedlarLELRALL 751
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2024459673 533 NKLKASETEITSLQNVRQWYQQQLVLAQEARVRLQSEMANIQA 575
Cdd:COG4913 752 EERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMR 794
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1014-1254 |
4.91e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.53 E-value: 4.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1014 AQERIQALETELQavrssklmlekELQEVISLTSQELEEYREKVLELEDELQESRgfrRKIKRLEEINKKLALELEHERG 1093
Cdd:COG4942 18 QADAAAEAEAELE-----------QLQQEIAELEKELAALKKEEKALLKQLAALE---RRIAALARRIRALEQELAALEA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1094 KLTGLSQSNAALREHNNVLETALAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAK 1173
Cdd:COG4942 84 ELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1174 ADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQ 1253
Cdd:COG4942 164 ALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
.
gi 2024459673 1254 P 1254
Cdd:COG4942 244 P 244
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
920-1161 |
6.00e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 6.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 920 MASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAkhkaYENAVSILSRRLQESLTAKESAEAELS 999
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAA----LERRIAALARRIRALEQELAALEAELA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1000 KLKAQItdggsnQIAQERIQALETEL--QAVRSSKLMLEKELQEVISLTSQELEEYREKVLE--LEDELQESRGFRRKIK 1075
Cdd:COG4942 87 ELEKEI------AELRAELEAQKEELaeLLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKylAPARREQAEELRADLA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1076 RLEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASL 1155
Cdd:COG4942 161 ELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
....*.
gi 2024459673 1156 EKEKSK 1161
Cdd:COG4942 241 ERTPAA 246
|
|
| PHA01351 |
PHA01351 |
putative minor structural protein |
855-1053 |
6.18e-06 |
|
putative minor structural protein
Pssm-ID: 107029 Cd Length: 1070 Bit Score: 51.10 E-value: 6.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 855 KELKRELLQIQVEKQSLETEhsklqKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQV 934
Cdd:PHA01351 504 EELKANKFNEQVALQILESE-----LQFAQLQNQLKEYQFKLNNFLISPQDLEKDLKHLGFDSAIISALIYENQVEQLIK 578
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 935 EQM---QEEAKK---AITEQKQKMKRLG--SDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLkaQIT 1006
Cdd:PHA01351 579 FQLnniESLAKKgylSLDEIKKQFKAIGiiKEYEDAFINFYNQELQISAFLTILKSQLRQFQIDPKEAETELKKL--NIN 656
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2024459673 1007 DGGSNQIAQE---------RIQALETELQAVRSSKLMLEKELQEVI---SLTSQELEEY 1053
Cdd:PHA01351 657 EYLANQIIQEeyniniaklQLSVLETIAKTLYYDQQQLSGELKKIHkdkTALELYITKF 715
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
443-1247 |
6.18e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 51.11 E-value: 6.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 443 EVATLKQSCWDLERAMADLQNTLEAKNASLASSNNDLQLAEEQYQ----RLMLKVEDM--QKSVLTRDSTVHDLRQQLAS 516
Cdd:PRK04863 287 EALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQaasdHLNLVQTALrqQEKIERYQADLEELEERLEE 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 517 LQSQLQKVQLERTTLTNKLKASETEITSLQNVRQWYQQQLVLAQ-------EARVRLQSEMANIQAGQMTQAGV---LEH 586
Cdd:PRK04863 367 QNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQtraiqyqQAVQALERAKQLCGLPDLTADNAedwLEE 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 587 LKLENVALSQQLTETQHR-----SIKEKERIAAQLQNIEADMLDQEAAFMQIQEaktmveedLQRKLEEFEDEKEQLQKM 661
Cdd:PRK04863 447 FQAKEQEATEELLSLEQKlsvaqAAHSQFEQAYQLVRKIAGEVSRSEAWDVARE--------LLRRLREQRHLAEQLQQL 518
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 662 ADSAATLEQELDQvkltlhQRDLQleslqqehlDLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDM 741
Cdd:PRK04863 519 RMRLSELEQRLRQ------QQRAE---------RLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMA 583
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 742 IQYlQNEKIVLEVALQTAKASQ-DQLDEGTKRLGE---DTEVTSEILEQLRQEMAIR------------------SSQVE 799
Cdd:PRK04863 584 LRQ-QLEQLQARIQRLAARAPAwLAAQDALARLREqsgEEFEDSQDVTEYMQQLLERereltverdelaarkqalDEEIE 662
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 800 NLQQENGSLKKQVQKVKEQFlqQKVMVEAYRRDASSKDQ--------------LISELKATKKRLDSEmKELKRELLQIQ 865
Cdd:PRK04863 663 RLSQPGGSEDPRLNALAERF--GGVLLSEIYDDVSLEDApyfsalygparhaiVVPDLSDAAEQLAGL-EDCPEDLYLIE 739
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 866 VEKQSLETEHSKLQKEVTEVHQQMVEI------------------ENHLQSVQKERDEMETRLQSLQFDKEQMASLAEA- 926
Cdd:PRK04863 740 GDPDSFDDSVFSVEELEKAVVVKIADRqwrysrfpevplfgraarEKRIEQLRAEREELAERYATLSFDVQKLQRLHQAf 819
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 927 ----NQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRL-QESLTAKESAEAELSKL 1001
Cdd:PRK04863 820 srfiGSHLAVAFEADPEAELRQLNRRRVELERALADHESQEQQQRSQLEQAKEGLSALNRLLpRLNLLADETLADRVEEI 899
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1002 KAQITDGGSNQ--IAQ--ERIQALETELQAVRSSKlmlekelqevisltsQELEEYREKVLELEDELQESrgfRRKIKRL 1077
Cdd:PRK04863 900 REQLDEAEEAKrfVQQhgNALAQLEPIVSVLQSDP---------------EQFEQLKQDYQQAQQTQRDA---KQQAFAL 961
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1078 EEINKKLAleleHergkltgLSQSNAalrehnnvletalAKREADLVQLNLQVQAVLKRKEEE-DQQMQQLIQAlQASLE 1156
Cdd:PRK04863 962 TEVVQRRA----H-------FSYEDA-------------AEMLAKNSDLNEKLRQRLEQAEQErTRAREQLRQA-QAQLA 1016
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1157 KEKSKVKDLKEQvaaakadaahnrrhYRAAALELNEVKKELhaKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEAR 1236
Cdd:PRK04863 1017 QYNQVLASLKSS--------------YDAKRQMLQELKQEL--QDLGVPADSGAEERARARRDELHARLSANRSRRNQLE 1080
|
890
....*....|.
gi 2024459673 1237 SQLQLLQKKLD 1247
Cdd:PRK04863 1081 KQLTFCEAEMD 1091
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
587-1123 |
6.84e-06 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 50.67 E-value: 6.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 587 LKLENVALSQQLTETQHRSI-KEKERIAAQLQNIEADMLDQEAAF---MQIQEAKTMVEEDLQR----------KLEEFE 652
Cdd:PRK01156 197 LELENIKKQIADDEKSHSITlKEIERLSIEYNNAMDDYNNLKSALnelSSLEDMKNRYESEIKTaesdlsmeleKNNYYK 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 653 DEKEQLQKMADSAA-----------TLEQELDQVKLTLHQRDLQLESLQQEHLDLmkqftmtqEMLHTKEQTLDDLQTQY 721
Cdd:PRK01156 277 ELEERHMKIINDPVyknrnyindyfKYKNDIENKKQILSNIDAEINKYHAIIKKL--------SVLQKDYNDYIKKKSRY 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 722 DELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENL 801
Cdd:PRK01156 349 DDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKVSSL 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 802 QQENGSLKKQVQKVKEQFL----QQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSK 877
Cdd:PRK01156 429 NQRIRALRENLDELSRNMEmlngQSVCPVCGTTLGEEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEY 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 878 LQKEvtevhqqmvEIENHLQSVQKerdeMETRLQSLQFDKEQMASLAEANqtlkLQVEQMQEEAKKAITEqkqkmkrlgs 957
Cdd:PRK01156 509 LESE---------EINKSINEYNK----IESARADLEDIKIKINELKDKH----DKYEEIKNRYKSLKLE---------- 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 958 dltsaqkEMKAKHKAYENAVSILS--------RRLQESLTAKESAEAELSKLKAQITDggSNQIAQERIQALETELQAVR 1029
Cdd:PRK01156 562 -------DLDSKRTSWLNALAVISlidietnrSRSNEIKKQLNDLESRLQEIEIGFPD--DKSYIDKSIREIENEANNLN 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1030 SSKLMLEkELQEVISLTSQELEEYREKVLELEDELQESRGFRRKIKRLEEINKKLALELEHERGKLTGLSQSNAALREHN 1109
Cdd:PRK01156 633 NKYNEIQ-ENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRI 711
|
570
....*....|....
gi 2024459673 1110 NVLETALAKREADL 1123
Cdd:PRK01156 712 NELSDRINDINETL 725
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
849-1000 |
6.97e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 49.15 E-value: 6.97e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 849 RLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAE-AN 927
Cdd:COG1579 21 RLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEYEALQKEiES 100
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024459673 928 QTLKLQV-EQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSK 1000
Cdd:COG1579 101 LKRRISDlEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAKIPP 174
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
768-1344 |
9.33e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 50.49 E-value: 9.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 768 EGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKE--QFLQQKVMVEAYRRDASSKDqLISELKA 845
Cdd:pfam05483 74 EGLSRLYSKLYKEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQelQFENEKVSLKLEEEIQENKD-LIKENNA 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 846 TKkrldsEMKELKRELLQIQVEKQSletehsKLQKEVTEVHQQMVEIENHLQS---------VQKERDEMETRLQsLQFD 916
Cdd:pfam05483 153 TR-----HLCNLLKETCARSAEKTK------KYEYEREETRQVYMDLNNNIEKmilafeelrVQAENARLEMHFK-LKED 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 917 KEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKrlgsDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEA 996
Cdd:pfam05483 221 HEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMK----DLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTK 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 997 ELSKLKAQITDGGSNQIA-QERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLELEDELqesRGFRRKIK 1075
Cdd:pfam05483 297 ELEDIKMSLQRSMSTQKAlEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELL---RTEQQRLE 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1076 RLEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALAKREAdLVQLNLQVQAV--------------LKRKEEED 1141
Cdd:pfam05483 374 KNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEK-LLDEKKQFEKIaeelkgkeqeliflLQAREKEI 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1142 QQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKH 1221
Cdd:pfam05483 453 HDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERM 532
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1222 SQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQKEREIGTLKQQLDMSEQRSHKELEGMQVVLQN 1301
Cdd:pfam05483 533 LKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEE 612
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 2024459673 1302 IKTELEVVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQL 1344
Cdd:pfam05483 613 LHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEI 655
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
379-881 |
1.05e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.15 E-value: 1.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 379 DEMLQVLKEKMRLEGQLEALSAEANQALKEKAELQAQLAALNMKLQaQVEHSQSSQQKQESLSSEVATLKQSCWDLERAM 458
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELE-KLEKLLQLLPLYQELEALEAELAELPERLEELE 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 459 ADLQNTLEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQSQLQKVQLERTTLTNKLKAS 538
Cdd:COG4717 153 ERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 539 ETEITSLQNVRQWYQQQLVLAQEA-RVRLQSEMANIQAGQMTQAGVLehlkLENVALSQQLTETQHRSIKEKERIAAQLQ 617
Cdd:COG4717 233 ENELEAAALEERLKEARLLLLIAAaLLALLGLGGSLLSLILTIAGVL----FLVLGLLALLFLLLAREKASLGKEAEELQ 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 618 NIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELdqvkltlhqrdlQLESLQQEHLDLM 697
Cdd:COG4717 309 ALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEEL------------QLEELEQEIAALL 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 698 KQFTMTQEmlHTKEQTLDDLQtQYDELKARLEEFQSDatskddmiqylqnekivLEVALQTAKASQDQLDEgtkrlgedt 777
Cdd:COG4717 377 AEAGVEDE--EELRAALEQAE-EYQELKEELEELEEQ-----------------LEELLGELEELLEALDE--------- 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 778 EVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEqflqqkvmveayrrdasskDQLISELKATKKRLDSEMKEL 857
Cdd:COG4717 428 EELEEELEELEEELEELEEELEELREELAELEAELEQLEE-------------------DGELAELLQELEELKAELREL 488
|
490 500
....*....|....*....|....
gi 2024459673 858 KRELLQIQVEKQSLETEHSKLQKE 881
Cdd:COG4717 489 AEEWAALKLALELLEEAREEYREE 512
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
921-1085 |
1.08e-05 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 49.78 E-value: 1.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 921 ASLAEANQTLKLQVEQMQEEA----KKAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEA 996
Cdd:PRK12704 31 AKIKEAEEEAKRILEEAKKEAeaikKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLELLEKREE 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 997 ELSKLKAQITDggsnqiAQERIQALETELQAVRSSKLmleKELQEVISLTSqelEEYREKVLE-LEDELQESRGfrRKIK 1075
Cdd:PRK12704 111 ELEKKEKELEQ------KQQELEKKEEELEELIEEQL---QELERISGLTA---EEAKEILLEkVEEEARHEAA--VLIK 176
|
170
....*....|
gi 2024459673 1076 RLEEINKKLA 1085
Cdd:PRK12704 177 EIEEEAKEEA 186
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
386-615 |
1.30e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 386 KEKMRLEGQLEALSAEANQALKEKAELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVATLKQSCWDLERAMADLQNTL 465
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 466 EAKNASLASSNNDLQLAEEQ-YQRLMLKVEDMQKSVltrdSTVHDLRQQLASLQSQLQKVQLERTTLTNKLKASETEITS 544
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQpPLALLLSPEDFLDAV----RRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024459673 545 LQNVRQWYQQQLVLAQEARVRLQSEMANIQAGQMTQAGVLEHLKLENVALSQQLTETQHRSIKEKERIAAQ 615
Cdd:COG4942 176 LEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
839-1095 |
1.98e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.61 E-value: 1.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 839 LISELKATKKRLDSEMKELKRELLQIQVEKQSLEtehsKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQfdkE 918
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELA----ALKKEEKALLKQLAALERRIAALARRIRALEQELAALE---A 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 919 QMASLAEANQTLKLQVEQMQEEAKKAITEQkQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAEL 998
Cdd:COG4942 84 ELAELEKEIAELRAELEAQKEELAELLRAL-YRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAEL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 999 SKLKAQItdggsnQIAQERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLELEDELQESRGFRRKIKRLE 1078
Cdd:COG4942 163 AALRAEL------EAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
250
....*....|....*....
gi 2024459673 1079 EI--NKKLALELEHERGKL 1095
Cdd:COG4942 237 AAaaERTPAAGFAALKGKL 255
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
853-1004 |
2.14e-05 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 49.01 E-value: 2.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 853 EMKELKRE-LLQIQVEKQSLETEHsklQKEVTEVHQQMVEIENHLQsvQKErDEMETRLQSLQFDKEQMASLAEANQTLK 931
Cdd:PRK12704 50 EAEAIKKEaLLEAKEEIHKLRNEF---EKELRERRNELQKLEKRLL--QKE-ENLDRKLELLEKREEELEKKEKELEQKQ 123
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024459673 932 LQVEQMQEEAKKAITEQKQKMKRLgSDLTSAQ-KEM---KAKHKAYENAVSILSRRLQEsltAKESAEAELSKLKAQ 1004
Cdd:PRK12704 124 QELEKKEEELEELIEEQLQELERI-SGLTAEEaKEIlleKVEEEARHEAAVLIKEIEEE---AKEEADKKAKEILAQ 196
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
982-1108 |
2.37e-05 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 49.09 E-value: 2.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 982 RRLQESLTAKESAEAELSKLKAQITDggsnQIAQERIQALETELQAVRSSKLMLEKELQEVIsltsQELEEYREKVLELE 1061
Cdd:COG2433 383 EELIEKELPEEEPEAEREKEHEEREL----TEEEEEIRRLEEQVERLEAEVEELEAELEEKD----ERIERLERELSEAR 454
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 2024459673 1062 DELQESRGFRRKIKRLEEINKKLALELEHERGKLTGLSQSNAALREH 1108
Cdd:COG2433 455 SEERREIRKDREISRLDREIERLERELEEERERIEELKRKLERLKEL 501
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
457-666 |
2.42e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 2.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 457 AMADLQNTLEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQSQLQKVQLERTTLTNKLK 536
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 537 ASETEITSL-----QNVRQWYQQQLVLAQEAR--VRLQSEMANIQAGQMTQAGVLEHLKLENVALSQQLTETQHRSIKEK 609
Cdd:COG4942 101 AQKEELAELlralyRLGRQPPLALLLSPEDFLdaVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 610 ERIAAQLQNIEADMLDQEAAFMQIQEAKTMVE---EDLQRKLEEFEDEKEQLQKMADSAA 666
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAaelAELQQEAEELEALIARLEAEAAAAA 240
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
510-941 |
2.81e-05 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 49.03 E-value: 2.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 510 LRQQLASLQSQLQKVQLERTTLTNKLKASETEIT----SLQNVRQWY---QQQL-----VLAQEARVR-LQSEMANIQAG 576
Cdd:PRK10246 424 LRQRLVALHGQIVPQQKRLAQLQVAIQNVTQEQTqrnaALNEMRQRYkekTQQLadvktICEQEARIKdLEAQRAQLQAG 503
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 577 Q-MTQAGVLEHLKLENVAlSQQLTETQHRsIKEKERIAAQLQNIEADMLDQEAAFM-QIQEAktmvEEDLQRKLEEFEDE 654
Cdd:PRK10246 504 QpCPLCGSTSHPAVEAYQ-ALEPGVNQSR-LDALEKEVKKLGEEGAALRGQLDALTkQLQRD----ESEAQSLRQEEQAL 577
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 655 KEQLQKMADSAATLEQELDQVKLTL---HQRDLQLESLQQEHL------DLMKQFTMTQEMLHTKEQTLDDLQTQY---- 721
Cdd:PRK10246 578 TQQWQAVCASLNITLQPQDDIQPWLdaqEEHERQLRLLSQRHElqgqiaAHNQQIIQYQQQIEQRQQQLLTALAGYaltl 657
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 722 ---DELKARLEEFQSDATskddMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQV 798
Cdd:PRK10246 658 pqeDEEASWLATRQQEAQ----SWQQRQNELTALQNRIQQLTPLLETLPQSDDLPHSEETVALDNWRQVHEQCLSLHSQL 733
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 799 ENLQQENGSLKKQVQKVKEQF---LQQKVMV--EAYRRdASSKDQLISELKATKKRLDSEMKE---LKRELLQIQVEKQS 870
Cdd:PRK10246 734 QTLQQQDVLEAQRLQKAQAQFdtaLQASVFDdqQAFLA-ALLDEETLTQLEQLKQNLENQRQQaqtLVTQTAQALAQHQQ 812
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024459673 871 LETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQslqfdkeQMASLAEANQTLKLQVEQMQEEA 941
Cdd:PRK10246 813 HRPDGLDLTVTVEQIQQELAQLAQQLRENTTRQGEIRQQLK-------QDADNRQQQQALMQQIAQATQQV 876
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
453-955 |
3.10e-05 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 48.58 E-value: 3.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 453 DLERAMADLQNTLEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQSQLQKVQLERTTLT 532
Cdd:pfam05557 52 ELQKRIRLLEKREAEAEEALREQAELNRLKKKYLEALNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTN 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 533 NKLKASeteitslqnvrqwyQQQLVLAQEARVRLQSEMANIQAGQMTQAGVLEHLKLENVALSQQLTETQH-RSIKEKER 611
Cdd:pfam05557 132 SELEEL--------------QERLDLLKAKASEAEQLRQNLEKQQSSLAEAEQRIKELEFEIQSQEQDSEIvKNSKSELA 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 612 IAAQLQNIEADMLDQEAAFMQIQEAKTMVEE---DLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDL---- 684
Cdd:pfam05557 198 RIPELEKELERLREHNKHLNENIENKLLLKEeveDLKRKLEREEKYREEAATLELEKEKLEQELQSWVKLAQDTGLnlrs 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 685 ------QLESLQQEHLDLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQT 758
Cdd:pfam05557 278 pedlsrRIEQLQQREIVLKEENSSLTSSARQLEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKERDG 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 759 AKASQDQLDEGTKRLGEDTEVTSEI--LEQLRQEMAIRSS----QVENLQQENGSLKKQVQKVkeqflqqKVMVEAYRRD 832
Cdd:pfam05557 358 YRAILESYDKELTMSNYSPQLLERIeeAEDMTQKMQAHNEemeaQLSVAEEELGGYKQQAQTL-------ERELQALRQQ 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 833 ASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQ-----KEVTEVHQQMVEI-------ENHLQSVQ 900
Cdd:pfam05557 431 ESLADPSYSKEEVDSLRRKLETLELERQRLREQKNELEMELERRCLQgdydpKKTKVLHLSMNPAaeayqqrKNQLEKLQ 510
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 2024459673 901 KERDEMETRLQSLQFDKEQMASLAEANQTLKlqvEQMQEEAKKAITEQKQKMKRL 955
Cdd:pfam05557 511 AEIERLKRLLKKLEDDLEQVLRLPETTSTMN---FKEVLDLRKELESAELKNQRL 562
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
606-1264 |
3.20e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 48.68 E-value: 3.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 606 IKEKERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEkeqlqkMADSAATLEQELDQVKLTLHQRDLQ 685
Cdd:pfam12128 250 FNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQ------WKEKRDELNGELSAADAAVAKDRSE 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 686 LESLQQEHLDLMKQftmTQEMLHTKEQTLDDLQTQYDELKARLEEF---QSDATSKDDMIQYLQNEKIVLEVAlqTAKAS 762
Cdd:pfam12128 324 LEALEDQHGAFLDA---DIETAAADQEQLPSWQSELENLEERLKALtgkHQDVTAKYNRRRSKIKEQNNRDIA--GIKDK 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 763 QDQLDEGTKRLGEDTEVTSEILE-QLRQEM--AIRSSQVENLQQEN--GSLK---KQVQKVKEQFLQQKVMVEAYRRDAS 834
Cdd:pfam12128 399 LAKIREARDRQLAVAEDDLQALEsELREQLeaGKLEFNEEEYRLKSrlGELKlrlNQATATPELLLQLENFDERIERARE 478
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 835 SKDQ-------LISELKATKKRLDSEMKELKRELLQIQVEKQSLE-----------TEHSKLQKEVTEVHQQMVEIENHL 896
Cdd:pfam12128 479 EQEAanaeverLQSELRQARKRRDQASEALRQASRRLEERQSALDelelqlfpqagTLLHFLRKEAPDWEQSIGKVISPE 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 897 Q--------SVQKERDEMETRLQSLQFDKEQM--ASLAEANQTLKLQVEQMQE---EAKKAITEQKQKMKRLGSDLTSAQ 963
Cdd:pfam12128 559 LlhrtdldpEVWDGSVGGELNLYGVKLDLKRIdvPEWAASEEELRERLDKAEEalqSAREKQAAAEEQLVQANGELEKAS 638
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 964 KEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQitdggsnqiAQERIQALETELQAV-RSSKLMLEKELQEV 1042
Cdd:pfam12128 639 REETFARTALKNARLDLRRLFDEKQSEKDKKNKALAERKDS---------ANERLNSLEAQLKQLdKKHQAWLEEQKEQK 709
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1043 ISLTSQELEEYREKVLELEDElqesrgfrrkikrLEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALAKREAD 1122
Cdd:pfam12128 710 REARTEKQAYWQVVEGALDAQ-------------LALLKAAIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKRE 776
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1123 LVQLNLQVQAVLKRKEE-------EDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADaahnrrhyraAALELNEVKK 1195
Cdd:pfam12128 777 IRTLERKIERIAVRRQEvlryfdwYQETWLQRRPRLATQLSNIERAISELQQQLARLIAD----------TKLRRAKLEM 846
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024459673 1196 ELHAKELLVQALQAEVDKLQVEDE-----KHSQEVSQFQQELAEARSQLQLLQKKLdDKLSEQplVSQEVEDLK 1264
Cdd:pfam12128 847 ERKASEKQQVRLSENLRGLRCEMSklatlKEDANSEQAQGSIGERLAQLEDLKLKR-DYLSES--VKKYVEHFK 917
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
825-1068 |
3.22e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.47 E-value: 3.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 825 MVEAYRRDasSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHS--KLQKEVTEVHQQMVEIENHLQSVQKE 902
Cdd:COG3206 157 LAEAYLEQ--NLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGlvDLSEEAKLLLQQLSELESQLAEARAE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 903 RDEMETRLQSLQfdkEQMASLAEANQTLkLQVEQMQeEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSR 982
Cdd:COG3206 235 LAEAEARLAALR---AQLGSGPDALPEL-LQSPVIQ-QLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQ 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 983 RLQESLtakESAEAELsklkaqitdggsnQIAQERIQALETELQAVRSSKLMLEKELQEVISLTsQELEEYREKVLELED 1062
Cdd:COG3206 310 EAQRIL---ASLEAEL-------------EALQAREASLQAQLAQLEARLAELPELEAELRRLE-REVEVARELYESLLQ 372
|
....*.
gi 2024459673 1063 ELQESR 1068
Cdd:COG3206 373 RLEEAR 378
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1050-1344 |
3.88e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 48.50 E-value: 3.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1050 LEEYREKV----LELEDELQESRGFRRKIKrlEEINKKLALELeHER--GKLTGLSQSNAALREHNNVLETALAKREAdl 1123
Cdd:PRK02224 164 LEEYRERAsdarLGVERVLSDQRGSLDQLK--AQIEEKEEKDL-HERlnGLESELAELDEEIERYEEQREQARETRDE-- 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1124 vqlnlqVQAVLKRKEEEDQQMQQL---IQALQASLEKEKSKVKDLKEQVaaakadaahnrRHYRAAALELNEVKKELHAK 1200
Cdd:PRK02224 239 ------ADEVLEEHEERREELETLeaeIEDLRETIAETEREREELAEEV-----------RDLRERLEELEEERDDLLAE 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1201 ----ELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQKEREIGT 1276
Cdd:PRK02224 302 agldDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVED 381
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024459673 1277 LKQQLDMSEQR---SHKELEGMQVVLQNIKTELEVVREDLSVTQKDKFMLQAKVSELKNSmkslLQQNQQL 1344
Cdd:PRK02224 382 RREEIEELEEEieeLRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARER----VEEAEAL 448
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
789-1279 |
3.97e-05 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 48.20 E-value: 3.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 789 QEMAIRSSQVENLQQE-NGSLKKQVQKVKeqflQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVE 867
Cdd:pfam05557 51 QELQKRIRLLEKREAEaEEALREQAELNR----LKKKYLEALNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELE 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 868 KQSLETEHSKLQKEVTEVHQQMVEIE---NHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLK---LQVEQMQEEA 941
Cdd:pfam05557 127 LQSTNSELEELQERLDLLKAKASEAEqlrQNLEKQQSSLAEAEQRIKELEFEIQSQEQDSEIVKNSKselARIPELEKEL 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 942 KKAITEQKQ--KMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQEsltaKESAEAELSKLKAQITDGGSN----QIAQ 1015
Cdd:pfam05557 207 ERLREHNKHlnENIENKLLLKEEVEDLKRKLEREEKYREEAATLELE----KEKLEQELQSWVKLAQDTGLNlrspEDLS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1016 ERIQALETELQAVRSSKLMLE---KELQEVISLTSQELEEYREKVLELEDELQESRGFRRKI-KRLEEINKKLALELEHE 1091
Cdd:pfam05557 283 RRIEQLQQREIVLKEENSSLTssaRQLEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLqRRVLLLTKERDGYRAIL 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1092 RGKLTGLSQSNAALREHNNVLEtaLAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVkDLKEQvaa 1171
Cdd:pfam05557 363 ESYDKELTMSNYSPQLLERIEE--AEDMTQKMQAHNEEMEAQLSVAEEELGGYKQQAQTLERELQALRQQE-SLADP--- 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1172 akadaahnrrhyRAAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKHS----------------------------Q 1223
Cdd:pfam05557 437 ------------SYSKEEVDSLRRKLETLELERQRLREQKNELEMELERRClqgdydpkktkvlhlsmnpaaeayqqrkN 504
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1224 EVSQFQQELAEARSQLQLLQKKLDDKLSEQP----LVSQEVEDLKWEVEQKEREIGTLKQ 1279
Cdd:pfam05557 505 QLEKLQAEIERLKRLLKKLEDDLEQVLRLPEttstMNFKEVLDLRKELESAELKNQRLKE 564
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
696-1317 |
4.42e-05 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 48.28 E-value: 4.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 696 LMKQFTMTQEMLHTKEQTLDDLQtqyDELKArleefqsdatsKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGE 775
Cdd:pfam10174 58 LKEQYRVTQEENQHLQLTIQALQ---DELRA-----------QRDLNQLLQQDFTTSPVDGEDKFSTPELTEENFRRLQS 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 776 DTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEqFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMK 855
Cdd:pfam10174 124 EHERQAKELFLLRKTLEEMELRIETQKQTLGARDESIKKLLE-MLQSKGLPKKSGEEDWERTRRIAEAEMQLGHLEVLLD 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 856 ELKRELLQIQVEKQSLETEHSKLQKevTEVHQQMVEI-ENHLQSVQKERDEMETRLQSLQfdKEQMASLAEANQTLKlQV 934
Cdd:pfam10174 203 QKEKENIHLREELHRRNQLQPDPAK--TKALQTVIEMkDTKISSLERNIRDLEDEVQMLK--TNGLLHTEDREEEIK-QM 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 935 EQMQEEAKKaiteQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRR------LQESLTAKESAEAELS--------- 999
Cdd:pfam10174 278 EVYKSHSKF----MKNKIDQLKQELSKKESELLALQTKLETLTNQNSDCkqhievLKESLTAKEQRAAILQtevdalrlr 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1000 -KLKAQITDGGSNQIaQERIQALETELQAVRSSKLMLE-------------KELQEVISLTSQELEEYREKVLELEDE-- 1063
Cdd:pfam10174 354 lEEKESFLNKKTKQL-QDLTEEKSTLAGEIRDLKDMLDvkerkinvlqkkiENLQEQLRDKDKQLAGLKERVKSLQTDss 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1064 --------LQESRGFRRKIkrLEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALAKREADLVQLNLQVQAVLK 1135
Cdd:pfam10174 433 ntdtalttLEEALSEKERI--IERLKEQREREDRERLEELESLKKENKDLKEKVSALQPELTEKESSLIDLKEHASSLAS 510
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1136 RKEEEDQQMQQLiqalQASLEKEKSKVKDLKEQVAAAKADAAhNRRHYRAAALELNEVKKELHAKELLVQALQAEVDKL- 1214
Cdd:pfam10174 511 SGLKKDSKLKSL----EIAVEQKKEECSKLENQLKKAHNAEE-AVRTNPEINDRIRLLEQEVARYKEESGKAQAEVERLl 585
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1215 ----QVEDEKHSQEvsqfqQELAEarsqlqlLQKKLDDKLSEQPLVSQEVEDLKWEVEQKEREIG--TLKQQLDMSEQRS 1288
Cdd:pfam10174 586 gilrEVENEKNDKD-----KKIAE-------LESLTLRQMKEQNKKVANIKHGQQEMKKKGAQLLeeARRREDNLADNSQ 653
|
650 660
....*....|....*....|....*....
gi 2024459673 1289 HKELEGMQVVLQNIKTELEVVREDLSVTQ 1317
Cdd:pfam10174 654 QLQLEELMGALEKTRQELDATKARLSSTQ 682
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
467-692 |
5.33e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 5.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 467 AKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQSQLQKVQLERTTLTNKLKASETEITSLQ 546
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 547 nvRQWYQQQLVLAQEARVRLQSEMANIQAGQMTQAGVLEHLKleNVALSQQLTETQHRSIKEKERIAAQLQNIEADMLDQ 626
Cdd:COG4942 97 --AELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVR--RLQYLKYLAPARREQAEELRADLAELAALRAELEAE 172
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024459673 627 EAafmQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQE 692
Cdd:COG4942 173 RA---ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
894-1349 |
5.84e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.84 E-value: 5.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 894 NHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAitEQKQKMKRLGSDLTSAQKEMKAKHKAY 973
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKL--EKLLQLLPLYQELEALEAELAELPERL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 974 ENAVSILsRRLQESLTAKESAEAELSKLKAQITD--GGSNQIAQERIQALETELQAVRSSKLMLEKELQEVisltSQELE 1051
Cdd:COG4717 149 EELEERL-EELRELEEELEELEAELAELQEELEEllEQLSLATEEELQDLAEELEELQQRLAELEEELEEA----QEELE 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1052 EYREKVLELEDELQESRgFRRKIKRLEEINKKLAL---------ELEHERGKLTGLSQSNAALREhnnVLETALAKREAD 1122
Cdd:COG4717 224 ELEEELEQLENELEAAA-LEERLKEARLLLLIAAAllallglggSLLSLILTIAGVLFLVLGLLA---LLFLLLAREKAS 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1123 LVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVaaakadaahnrRHYRAAALELNEVKKELHAKEL 1202
Cdd:COG4717 300 LGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRI-----------EELQELLREAEELEEELQLEEL 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1203 LvQALQAEVDKLQVEDEKhsqevsQFQQELAEARSQLQLLQkklddklseqplvsqEVEDLKWEVEQKEREIGTLKQQLD 1282
Cdd:COG4717 369 E-QEIAALLAEAGVEDEE------ELRAALEQAEEYQELKE---------------ELEELEEQLEELLGELEELLEALD 426
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024459673 1283 mseqrshkeLEGMQVVLQNIKTELEVVREDLSVTQKDKFMLQAKVSELKNSMK--SLLQQNQQLKMDLK 1349
Cdd:COG4717 427 ---------EEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGElaELLQELEELKAELR 486
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
667-1338 |
5.92e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 47.77 E-value: 5.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 667 TLEQELDQVKLTLHQRDLQLESLQQEHLDLMKQFTMTQEmlhtkEQTLDDLQTQYDELKARLEEFQSDAtskddmIQYLQ 746
Cdd:COG5022 835 TEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQS-----AQRVELAERQLQELKIDVKSISSLK------LVNLE 903
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 747 NEKIVLEVALQTAKAsqdqldegtkrLGEDTEVTSEILEQLRQemAIRSSQVENLQQENGSLKKQVQKVKEQFLQQKVMV 826
Cdd:COG5022 904 LESEIIELKKSLSSD-----------LIENLEFKTELIARLKK--LLNNIDLEEGPSIEYVKLPELNKLHEVESKLKETS 970
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 827 EAYRRDASSKDQLISELKATKkrldSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVhqqmveieNHLQSVQKERDEM 906
Cdd:COG5022 971 EEYEDLLKKSTILVREGNKAN----SELKNFKKELAELSKQYGALQESTKQLKELPVEV--------AELQSASKIISSE 1038
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 907 ETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQ---------KMKRLGSDLTSAQKEMKAKHKAYENAV 977
Cdd:COG5022 1039 STELSILKPLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKQlyqlestenLLKTINVKDLEVTNRNLVKPANVLQFI 1118
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 978 SILSRRLQESLTAKESAEAELSKLKAQITDGGSNQIAQERIQALETE--------LQAVRSSKLMLEKELQEVISLTSQE 1049
Cdd:COG5022 1119 VAQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLealpspppFAALSEKRLYQSALYDEKSKLSSSE 1198
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1050 LEEYREKVLELEDELQEsrgfrrkikrlEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALAKREADLVQLNLQ 1129
Cdd:COG5022 1199 VNDLKNELIALFSKIFS-----------GWPRGDKLKKLISEGWVPTEYSTSLKGFNNLNKKFDTPASMSNEKLLSLLNS 1267
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1130 VQAVLKRKEEEDqqmqqliqalqaslEKEKSKVKDLKEQVaaakadaahNRRHYRAAALELNEVKKElhakellvQALQA 1209
Cdd:COG5022 1268 IDNLLSSYKLEE--------------EVLPATINSLLQYI---------NVGLFNALRTKASSLRWK--------SATEV 1316
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1210 EVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDklseqplVSQEVEDLKWEVEQKEREIGTLKQQLDMSEQRSH 1289
Cdd:COG5022 1317 NYNSEELDDWCREFEISDVDEELEELIQAVKVLQLLKDD-------LNKLDELLDACYSLNPAEIQNLKSRYDPADKENN 1389
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 2024459673 1290 KELEgmqvVLQNIKTELEVVREDLSVTQKDKfmLQAKVSELKNSMKSLL 1338
Cdd:COG5022 1390 LPKE----ILKKIEALLIKQELQLSLEGKDE--TEVHLSEIFSEEKSLI 1432
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
976-1210 |
6.07e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 6.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 976 AVSILSRRLQESLTAKESAEAELSKLKAQItdggsnQIAQERIQALETELQAVRSSKLMLEK---ELQEVISLTSQELEE 1052
Cdd:COG4942 7 LALLLALAAAAQADAAAEAEAELEQLQQEI------AELEKELAALKKEEKALLKQLAALERriaALARRIRALEQELAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1053 YREKVLELEDELQESRgfRRKIKRLEEINKKL-ALELEHERGKLT-GLSQSNAALREHNNVLETALAKREADLVQLNLQV 1130
Cdd:COG4942 81 LEAELAELEKEIAELR--AELEAQKEELAELLrALYRLGRQPPLAlLLSPEDFLDAVRRLQYLKYLAPARREQAEELRAD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1131 QAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAkelLVQALQAE 1210
Cdd:COG4942 159 LAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA---LIARLEAE 235
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1055-1288 |
6.18e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 6.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1055 EKVLELEDELQESRgfrRKIKRLEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALAKREADLVQLNLQVQAVL 1134
Cdd:COG4942 20 DAAAEAEAELEQLQ---QEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1135 KRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELhakellvQALQAEVDKL 1214
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADL-------AELAALRAEL 169
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024459673 1215 QVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQKEREIGTLKQQLDMSEQRS 1288
Cdd:COG4942 170 EAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
848-1169 |
6.19e-05 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 47.64 E-value: 6.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 848 KRLDSEMKELKRELLQIQVEKQSLETEHS-KLQKEVTEVHQQMVEIENHLQSVQKERDEMetRLQSLQFDKEQMASLAEA 926
Cdd:COG5185 206 SIKESETGNLGSESTLLEKAKEIINIEEAlKGFQDPESELEDLAQTSDKLEKLVEQNTDL--RLEKLGENAESSKRLNEN 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 927 NQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLT-AKESAEAELSKLKAQI 1005
Cdd:COG5185 284 ANNLIKQFENTKEKIAEYTKSIDIKKATESLEEQLAAAEAEQELEESKRETETGIQNLTAEIEqGQESLTENLEAIKEEI 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1006 TDGGSNQIAQERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLELEDELQESRGFRRKIKRLEEINKKLA 1085
Cdd:COG5185 364 ENIVGEVELSKSSEELDSFKDTIESTKESLDEIPQNQRGYAQEILATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLL 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1086 LELEHERGKLTGLSQSNAalrehnnvletaLAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDL 1165
Cdd:COG5185 444 NELISELNKVMREADEES------------QSRLEEAYDEINRSVRSKKEDLNEELTQIESRVSTLKATLEKLRAKLERQ 511
|
....
gi 2024459673 1166 KEQV 1169
Cdd:COG5185 512 LEGV 515
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
374-1056 |
6.19e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.60 E-value: 6.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 374 VAGTHDEMLQVLKEKMRLEGQLEALSAEANQalKEKAELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVATLKQSCWD 453
Cdd:COG4913 257 IRELAERYAAARERLAELEYLRAALRLWFAQ--RRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRG 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 454 LE-RAMADLQNTLEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSVLtrdSTVHDLRQQLASLQSQLQKVQLERTTLT 532
Cdd:COG4913 335 NGgDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFA---ALRAEAAALLEALEEELEALEEALAEAE 411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 533 NKLKASETEITSLQNVRQWYQQQlvlaqeaRVRLQSEMANIQAgqmtqagvlehlklenvALSQQLtetqhrSIKEKE-R 611
Cdd:COG4913 412 AALRDLRRELRELEAEIASLERR-------KSNIPARLLALRD-----------------ALAEAL------GLDEAElP 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 612 IAAQLQNIEADMLDQEAAFmqiqE------AKTMV--EEDLQRKLEEFEDEKeqlqkmadsaatLEQELDQVKLTLHQRD 683
Cdd:COG4913 462 FVGELIEVRPEEERWRGAI----ErvlggfALTLLvpPEHYAAALRWVNRLH------------LRGRLVYERVRTGLPD 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 684 LQLESLQQEHLDlmkqftmtqEMLHTKEQTLddlqtqYDELKARLEEfQSDATSKDDmIQYLQNEKIVLEVALQTaKASQ 763
Cdd:COG4913 526 PERPRLDPDSLA---------GKLDFKPHPF------RAWLEAELGR-RFDYVCVDS-PEELRRHPRAITRAGQV-KGNG 587
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 764 DQLDEGTKR-------LGEDTEvtsEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQF--LQQKVMVEAYRRDAS 834
Cdd:COG4913 588 TRHEKDDRRrirsryvLGFDNR---AKLAALEAELAELEEELAEAEERLEALEAELDALQERReaLQRLAEYSWDEIDVA 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 835 SKDQLISELKATKKRLDSEMKELKRelLQIQVEKqsLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQ 914
Cdd:COG4913 665 SAEREIAELEAELERLDASSDDLAA--LEEQLEE--LEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAE 740
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 915 --FDKEQMASLAE--ANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVS-----------I 979
Cdd:COG4913 741 dlARLELRALLEErfAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDadleslpeylaL 820
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 980 LSR-----------RLQESLtaKESAEAELSKLKAQITDggSNQIAQERIQALETELQAVR---SSKLMLE--------- 1036
Cdd:COG4913 821 LDRleedglpeyeeRFKELL--NENSIEFVADLLSKLRR--AIREIKERIDPLNDSLKRIPfgpGRYLRLEarprpdpev 896
|
730 740
....*....|....*....|....
gi 2024459673 1037 ----KELQEVISLTSQELEEYREK 1056
Cdd:COG4913 897 refrQELRAVTSGASLFDEELSEA 920
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
645-965 |
6.62e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.60 E-value: 6.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 645 QRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLqQEHLDLMKQFTMTQEMLHTKEQTLDD-------- 716
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRL-AEYSWDEIDVASAEREIAELEAELERldassddl 687
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 717 --LQTQYDELKARLEEFQSDATSKDDMIQYLQNEkivLEVALQTAKASQDQLDEGTKRlgEDTEVTSEILEQLRQEM--A 792
Cdd:COG4913 688 aaLEEQLEELEAELEELEEELDELKGEIGRLEKE---LEQAEEELDELQDRLEAAEDL--ARLELRALLEERFAAALgdA 762
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 793 IRSSQVENLQQENGSLKKQVQKVKEQFLQQkvmVEAYRR--------------DASSKDQLISELKATK-KRLDSEMKEL 857
Cdd:COG4913 763 VERELRENLEERIDALRARLNRAEEELERA---MRAFNRewpaetadldadleSLPEYLALLDRLEEDGlPEYEERFKEL 839
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 858 KRELlqiqvEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDemeTRLQsLQFDKEQMASLAEANQTLKLQVEQM 937
Cdd:COG4913 840 LNEN-----SIEFVADLLSKLRRAIREIKERIDPLNDSLKRIPFGPG---RYLR-LEARPRPDPEVREFRQELRAVTSGA 910
|
330 340
....*....|....*....|....*...
gi 2024459673 938 QEEAKKAITEQKQKMKRLGSDLTSAQKE 965
Cdd:COG4913 911 SLFDEELSEARFAALKRLIERLRSEEEE 938
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
642-1291 |
7.15e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 47.74 E-value: 7.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 642 EDLQRKLEefeDEKEQLQKMadSAATLEQELDQVKLTLHQ-RDLQLESLQQEHLDLMKQFTMTQEMLHTKEQTL----DD 716
Cdd:TIGR01612 699 DDLKSKID---KEYDKIQNM--ETATVELHLSNIENKKNElLDIIVEIKKHIHGEINKDLNKILEDFKNKEKELsnkiND 773
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 717 LQTQYDEL---KARLEEFQS---DATSKDDMIQylQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQE 790
Cdd:TIGR01612 774 YAKEKDELnkyKSKISEIKNhynDQINIDNIKD--EDAKQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDFLNKVDKF 851
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 791 MAIRSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVeaYRRDASSKDQLISELKATKKRLDSEMKELKR--ELLQI-QVE 867
Cdd:TIGR01612 852 INFENNCKEKIDSEHEQFAELTNKIKAEISDDKLND--YEKKFNDSKSLINEINKSIEEEYQNINTLKKvdEYIKIcENT 929
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 868 KQSLETEHSKlQKEVTEVHQQMVEIENHLQSVQKE-RDEMETRLQSLQFDKEQM---ASLA--EANQTLKLQ-------- 933
Cdd:TIGR01612 930 KESIEKFHNK-QNILKEILNKNIDTIKESNLIEKSyKDKFDNTLIDKINELDKAfkdASLNdyEAKNNELIKyfndlkan 1008
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 934 --------VEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELS-----K 1000
Cdd:TIGR01612 1009 lgknkenmLYHQFDEKEKATNDIEQKIEDANKNIPNIEIAIHTSIYNIIDEIEKEIGKNIELLNKEILEEAEINitnfnE 1088
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1001 LKAQITDGGSNQIAQERIQALETELQAVRSSKLMLEKELQEVIsltsQELEEYREKVLELEDELqesrgfRRKIKRLEEI 1080
Cdd:TIGR01612 1089 IKEKLKHYNFDDFGKEENIKYADEINKIKDDIKNLDQKIDHHI----KALEEIKKKSENYIDEI------KAQINDLEDV 1158
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1081 NKKLAL-----ELEHERGKLTGLSQSNAALREHNNVLETALAKREADLVQLNlQVQAV------------LKRKEEEDQQ 1143
Cdd:TIGR01612 1159 ADKAISnddpeEIEKKIENIVTKIDKKKNIYDEIKKLLNEIAEIEKDKTSLE-EVKGInlsygknlgklfLEKIDEEKKK 1237
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1144 MQQLIQALQASLE-----KEKSK--------VKDLKEQVAAAKADAAHNRRHY-------------RAAALELNEVKKEl 1197
Cdd:TIGR01612 1238 SEHMIKAMEAYIEdldeiKEKSPeienemgiEMDIKAEMETFNISHDDDKDHHiiskkhdenisdiREKSLKIIEDFSE- 1316
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1198 hakELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQ-KKLDDKLSEqplVSQEVE----DLKWEVEQKER 1272
Cdd:TIGR01612 1317 ---ESDINDIKKELQKNLLDAQKHNSDINLYLNEIANIYNILKLNKiKKIIDEVKE---YTKEIEennkNIKDELDKSEK 1390
|
730
....*....|....*....
gi 2024459673 1273 EIGTLKQQLDMSEQRSHKE 1291
Cdd:TIGR01612 1391 LIKKIKDDINLEECKSKIE 1409
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
387-574 |
7.22e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 47.32 E-value: 7.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 387 EKMRLEGQLEALSAEANQALKEKAELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVATLKQSCW--DLERAMADLQNT 464
Cdd:COG3206 199 EEFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSPViqQLRAQLAELEAE 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 465 LEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSVL-TRDSTVHDLRQQLASLQSQLQKVQLERTTLTNKlkasETEIT 543
Cdd:COG3206 279 LAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRILaSLEAELEALQAREASLQAQLAQLEARLAELPEL----EAELR 354
|
170 180 190
....*....|....*....|....*....|....*
gi 2024459673 544 SLQ----NVRQWYQQQLVLAQEARVRLQSEMANIQ 574
Cdd:COG3206 355 RLEreveVARELYESLLQRLEEARLAEALTVGNVR 389
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1014-1349 |
8.38e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 47.37 E-value: 8.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1014 AQERIQALETELQAVRSSK---LMLEKELQEVISLTSQELEEYREKVLELEDELQESRGFRRKIKRLEEINKKLALELEH 1090
Cdd:PRK03918 163 AYKNLGEVIKEIKRRIERLekfIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEE 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1091 ERGKLTGLSQSNAALREHNNVLETALAKREADLVQLNLQVQAVLKRKEEEDQQMQqliqalqasLEKEKSKVKDLKEQVA 1170
Cdd:PRK03918 243 LEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIK---------LSEFYEEYLDELREIE 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1171 AAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQvEDEKHSQEVSQFQQELAEARSQLQLLQK-KLDDK 1249
Cdd:PRK03918 314 KRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELE-ERHELYEEAKAKKEELERLKKRLTGLTPeKLEKE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1250 LseqplvsQEVEDLKWEVEQKEREIGTLKQQLDMSEQRSHKELEGmqvvLQNIKTELEVVREDLSVTQKDKFMLQ--AKV 1327
Cdd:PRK03918 393 L-------EELEKAKEEIEEEISKITARIGELKKEIKELKKAIEE----LKKAKGKCPVCGRELTEEHRKELLEEytAEL 461
|
330 340
....*....|....*....|..
gi 2024459673 1328 SELKNSMKSLLQQNQQLKMDLK 1349
Cdd:PRK03918 462 KRIEKELKEIEEKERKLRKELR 483
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
902-1273 |
8.81e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 8.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 902 ERDEMETRLQSLQFDKE-QMASLAEANQTLKLQVEQMQEEAKKAITE-QKQKMKRLGSDLTSAQKEMKAKhkayENAVSI 979
Cdd:PTZ00121 1080 DFDAKEDNRADEATEEAfGKAEEAKKTETGKAEEARKAEEAKKKAEDaRKAEEARKAEDARKAEEARKAE----DAKRVE 1155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 980 LSRRLQESLTAKESAEAELSKlkaqitdggsnqiaqeRIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLE 1059
Cdd:PTZ00121 1156 IARKAEDARKAEEARKAEDAK----------------KAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARK 1219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1060 LEDElqesrgfrrkiKRLEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALAKREAdlvqlnlQVQAVLKRKEE 1139
Cdd:PTZ00121 1220 AEDA-----------KKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQA-------AIKAEEARKAD 1281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1140 EDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAA---------------ALELNEVKKELHAKELLV 1204
Cdd:PTZ00121 1282 ELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKkkadaakkkaeeakkAAEAAKAEAEAAADEAEA 1361
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024459673 1205 QALQAEVDKLQVEDEKHSQEVSQFQQElaEARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQKERE 1273
Cdd:PTZ00121 1362 AEEKAEAAEKKKEEAKKKADAAKKKAE--EKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAE 1428
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
680-1029 |
1.09e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 46.66 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 680 HQRDLQlESLQQEHLDLMKQFTMTQEmlhtKEQTLDDLQTQY---DELKARLEEFQSDATSkddmiqYLQNEKIVLEVAL 756
Cdd:pfam17380 280 HQKAVS-ERQQQEKFEKMEQERLRQE----KEEKAREVERRRkleEAEKARQAEMDRQAAI------YAEQERMAMERER 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 757 QTAKASQDQLDEGTKRLGEdtevtseilEQLRQEMAiRSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDassk 836
Cdd:pfam17380 349 ELERIRQEERKRELERIRQ---------EEIAMEIS-RMRELERLQMERQQKNERVRQELEAARKVKILEEERQRK---- 414
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 837 dqlISELKATKKRLDSEMKELKRELLQIQVEKQSLETEhsKLQKEVTEVHQQMVEIenhlqsvqkERDEMETRLQSLQFD 916
Cdd:pfam17380 415 ---IQQQKVEMEQIRAEQEEARQREVRRLEEERAREME--RVRLEEQERQQQVERL---------RQQEEERKRKKLELE 480
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 917 KEQMASlAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLgsdltsaQKEMKAKHKA-YENAvsilSRRLQESLTAKESAE 995
Cdd:pfam17380 481 KEKRDR-KRAEEQRRKILEKELEERKQAMIEEERKRKLL-------EKEMEERQKAiYEEE----RRREAEEERRKQQEM 548
|
330 340 350
....*....|....*....|....*....|....
gi 2024459673 996 AELSKLKAQITDGGSNqiaQERIQALETELQAVR 1029
Cdd:pfam17380 549 EERRRIQEQMRKATEE---RSRLEAMEREREMMR 579
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
852-1191 |
1.35e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 46.89 E-value: 1.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 852 SEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLK 931
Cdd:pfam02463 165 SRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQE 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 932 LQVEQMQEEAKKAITEQKQKMKrlgsdltsaQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQITDGGSN 1011
Cdd:pfam02463 245 LLRDEQEEIESSKQEIEKEEEK---------LAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEK 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1012 Q-IAQERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLELEDELQESRGFRRKIKRLEEINKKLALELEH 1090
Cdd:pfam02463 316 LkESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1091 E---RGKLTGLSQSNAALREHNNVLETALAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKE 1167
Cdd:pfam02463 396 ElelKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLK 475
|
330 340
....*....|....*....|....
gi 2024459673 1168 QVAAAKADAAHNRRHYRAAALELN 1191
Cdd:pfam02463 476 ETQLVKLQEQLELLLSRQKLEERS 499
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
443-740 |
1.97e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.06 E-value: 1.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 443 EVATLKQSCWDLERAMADLQNTLEAKNASLASSNN---------DLQLAEEQYQRLMLKVEDMQKSvltrDSTVHDLRQQ 513
Cdd:COG4913 618 ELAELEEELAEAEERLEALEAELDALQERREALQRlaeyswdeiDVASAEREIAELEAELERLDAS----SDDLAALEEQ 693
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 514 LASLQSQLQKVQLERTTLTNKLKASETEITSLQNVRQWYQQQLVLAQEARVRLQSEMANIQAGQMTQAGVLEHLKLENVA 593
Cdd:COG4913 694 LEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEE 773
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 594 LSQQLTETQHRSIKEKERIAAQLQN---IEADMLDQEAAFMQ--IQEAKTMVEEDLQRKLEEFEDEKEQ---------LQ 659
Cdd:COG4913 774 RIDALRARLNRAEEELERAMRAFNRewpAETADLDADLESLPeyLALLDRLEEDGLPEYEERFKELLNEnsiefvadlLS 853
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 660 KMADSAATLEQELDQVKLTLHQ------RDLQLEsLQQEHLDLMKQFT--MTQEMLHTKEQTLDDLQTQYDELKARLEEF 731
Cdd:COG4913 854 KLRRAIREIKERIDPLNDSLKRipfgpgRYLRLE-ARPRPDPEVREFRqeLRAVTSGASLFDEELSEARFAALKRLIERL 932
|
....*....
gi 2024459673 732 QSDATSKDD 740
Cdd:COG4913 933 RSEEEESDR 941
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
510-736 |
1.98e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.78 E-value: 1.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 510 LRQQLASLQSQLQKVQ--LERTTLTNKLKASETEITSLQNVRQWYQQQLVLAQEARVRLQSEMANIQAGqmtqagvlehL 587
Cdd:COG3206 180 LEEQLPELRKELEEAEaaLEEFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQ----------L 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 588 KLENVALSQQLTETQHRSIKekeriaAQLQNIEADMLDQEAAFM----QIQEAKTMVEEDLQRKLEEFEDEKEQLQKMAD 663
Cdd:COG3206 250 GSGPDALPELLQSPVIQQLR------AQLAELEAELAELSARYTpnhpDVIALRAQIAALRAQLQQEAQRILASLEAELE 323
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024459673 664 SAATLEQELDQVKLTLHQRDLQLESLQQEHLDLMKQFTmtqemlhTKEQTLDDLQTQYDELKARLEEFQSDAT 736
Cdd:COG3206 324 ALQAREASLQAQLAQLEARLAELPELEAELRRLEREVE-------VARELYESLLQRLEEARLAEALTVGNVR 389
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
459-1247 |
2.29e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 46.10 E-value: 2.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 459 ADLQNTLEAKNASLASSNNDLQLAEEQYQRLMLKVEdMQKSVLTRDSTVHDLRQQLASLQSQLQKVQLERTTLTNKLKAS 538
Cdd:COG3096 309 VEMARELEELSARESDLEQDYQAASDHLNLVQTALR-QQEKIERYQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEAA 387
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 539 ETEITSLQNVRQWYQQQL-------VLAQEARVRLQSEMANIQAGQMTQAGVLEHLkLENVALSQQLTET-----QHRSI 606
Cdd:COG3096 388 EEEVDSLKSQLADYQQALdvqqtraIQYQQAVQALEKARALCGLPDLTPENAEDYL-AAFRAKEQQATEEvleleQKLSV 466
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 607 KE--KERIAAQLQNIE--ADMLDQEAAFMQIQE---------AKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELD 673
Cdd:COG3096 467 ADaaRRQFEKAYELVCkiAGEVERSQAWQTAREllrryrsqqALAQRLQQLRAQLAELEQRLRQQQNAERLLEEFCQRIG 546
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 674 QVKLTLHQRDLQLESLQQEHLDLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSdatsKDDMIQYLQNEkivLE 753
Cdd:COG3096 547 QQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARAPAWLA----AQDALERLREQ---SG 619
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 754 VALQTAKASQDQLDEGTKRLGEdTEVTSEILEQLRQEMAirsSQVENLQQENGSLKKQVQKVKEQFlQQKVMVEAYRrDA 833
Cdd:COG3096 620 EALADSQEVTAAMQQLLERERE-ATVERDELAARKQALE---SQIERLSQPGGAEDPRLLALAERL-GGVLLSEIYD-DV 693
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 834 SSKDQ--------------LISELKATKKRLDsEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEI------- 892
Cdd:COG3096 694 TLEDApyfsalygparhaiVVPDLSAVKEQLA-GLEDCPEDLYLIEGDPDSFDDSVFDAEELEDAVVVKLSDRqwrysrf 772
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 893 -----------ENHLQSVQKERDEMETRLQSLQFDKEQMASLAEA-----NQTLKLQVEQMQEEAKKAITEQKQKMKRLG 956
Cdd:COG3096 773 pevplfgraarEKRLEELRAERDELAEQYAKASFDVQKLQRLHQAfsqfvGGHLAVAFAPDPEAELAALRQRRSELEREL 852
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 957 SDLTSAQKEMKAKHKAYENAVSILSRRL-QESLTAKESAEAELSKLKAQITDGGSNQ--IAQ--ERIQALETELQAVRSs 1031
Cdd:COG3096 853 AQHRAQEQQLRQQLDQLKEQLQLLNKLLpQANLLADETLADRLEELREELDAAQEAQafIQQhgKALAQLEPLVAVLQS- 931
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1032 klmlekelqevislTSQELEEYREKVLELEDELQEsrgFRRKIKRLEE-INKKLALELEHERGKLTGLSQSNAALREHnn 1110
Cdd:COG3096 932 --------------DPEQFEQLQADYLQAKEQQRR---LKQQIFALSEvVQRRPHFSYEDAVGLLGENSDLNEKLRAR-- 992
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1111 vletaLAKREADLVQLNLQVQAVlkrkeeeDQQMQQLIQALQaslekekskvkDLKEQvaaakadaahnrrhYRAAALEL 1190
Cdd:COG3096 993 -----LEQAEEARREAREQLRQA-------QAQYSQYNQVLA-----------SLKSS--------------RDAKQQTL 1035
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*..
gi 2024459673 1191 NEVKKELhaKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLD 1247
Cdd:COG3096 1036 QELEQEL--EELGVQADAEAEERARIRRDELHEELSQNRSRRSQLEKQLTRCEAEMD 1090
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
387-790 |
2.32e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.80 E-value: 2.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 387 EKMRLEGQLEALSAEANQALKEkaELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVATLKQSCWDLERAMADLQNTLE 466
Cdd:PRK02224 296 DDLLAEAGLDDADAEAVEARRE--ELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELE 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 467 AKNASLASSNNDLQLAEEQYQRLMLKVEdmqksvltrdstvhDLRQQLASLQSQLQKVQLERTTLTNKLKASETEITSLQ 546
Cdd:PRK02224 374 EAREAVEDRREEIEELEEEIEELRERFG--------------DAPVDLGNAEDFLEELREERDELREREAELEATLRTAR 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 547 NVRQWYQQQLV------------------LAQEARVR---LQSEMANIQAGQMTQAGVLEHLK------------LENVA 593
Cdd:PRK02224 440 ERVEEAEALLEagkcpecgqpvegsphveTIEEDRERveeLEAELEDLEEEVEEVEERLERAEdlveaedrierlEERRE 519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 594 LSQQLTETQHRSIKEKERIAAQL----QNIEADMLDQ-EAAFMQIQEAKTMVEE--DLQRKLEEFEDEKEQLQKMADSAA 666
Cdd:PRK02224 520 DLEELIAERRETIEEKRERAEELreraAELEAEAEEKrEAAAEAEEEAEEAREEvaELNSKLAELKERIESLERIRTLLA 599
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 667 TLEQELDqvkltlhqrdlQLESLQQEHLDLMKQFTMTQEMLHTKEQTLDDLQTQYDEL--------KARLEEFQSDATSK 738
Cdd:PRK02224 600 AIADAED-----------EIERLREKREALAELNDERRERLAEKRERKRELEAEFDEArieearedKERAEEYLEQVEEK 668
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 2024459673 739 ddmIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLgEDTEVTSEILEQLRQE 790
Cdd:PRK02224 669 ---LDELREERDDLQAEIGAVENELEELEELRERR-EALENRVEALEALYDE 716
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
787-1334 |
2.33e-04 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 45.97 E-value: 2.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 787 LRQEMAIRSS----QVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKkrldsEMKELKRELL 862
Cdd:pfam10174 47 LRKEEAARISvlkeQYRVTQEENQHLQLTIQALQDELRAQRDLNQLLQQDFTTSPVDGEDKFSTP-----ELTEENFRRL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 863 QIQVEKQSLEtehsklqkevtevhqqmveienhLQSVQKERDEMETRLQSlqfDKEQMASLAEANQTLkLQVEQMQEEAK 942
Cdd:pfam10174 122 QSEHERQAKE-----------------------LFLLRKTLEEMELRIET---QKQTLGARDESIKKL-LEMLQSKGLPK 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 943 KAITEQKQKMKRLG-SDLTSAQKEMKAKHKAYENAvsilsrRLQESLTAKESAEAELSKLKAqitdggsnqiAQERIQAL 1021
Cdd:pfam10174 175 KSGEEDWERTRRIAeAEMQLGHLEVLLDQKEKENI------HLREELHRRNQLQPDPAKTKA----------LQTVIEMK 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1022 ETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLELEDELQESRGFRRKIKRLEEINKKLALELEHERGKLTGLSQS 1101
Cdd:pfam10174 239 DTKISSLERNIRDLEDEVQMLKTNGLLHTEDREEEIKQMEVYKSHSKFMKNKIDQLKQELSKKESELLALQTKLETLTNQ 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1102 NAALREHNNVLETALAKREADLVQLNLQVQAVLKRKEEEdqqmqqliqalQASLEKEKSKVKDLKEQVAAAkadaahnrr 1181
Cdd:pfam10174 319 NSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEK-----------ESFLNKKTKQLQDLTEEKSTL--------- 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1182 hyraaALELNEVKKELHAKELLVQALQAEVDKLQvedekhsQEVSQFQQELAEARSQLQLLQKklDDKLSEQPLVSQEvE 1261
Cdd:pfam10174 379 -----AGEIRDLKDMLDVKERKINVLQKKIENLQ-------EQLRDKDKQLAGLKERVKSLQT--DSSNTDTALTTLE-E 443
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024459673 1262 DLKweveQKEREIGTLKQQLDMSEQRSHKELEGMQVVLQNIKTELEVVREDLSVTQKDKFMLQAKVSELKNSM 1334
Cdd:pfam10174 444 ALS----EKERIIERLKEQREREDRERLEELESLKKENKDLKEKVSALQPELTEKESSLIDLKEHASSLASSG 512
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
837-1020 |
2.58e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.21 E-value: 2.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 837 DQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKE----RDEMETRLQS 912
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEieerREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 913 LQ---------------------FDK-EQMASLAEANQTLKLQVEQMQ---EEAKKAITEQKQKMKRLGSDLTSAQKEMK 967
Cdd:COG3883 95 LYrsggsvsyldvllgsesfsdfLDRlSALSKIADADADLLEELKADKaelEAKKAELEAKLAELEALKAELEAAKAELE 174
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 2024459673 968 AKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQITDGGSNQIAQERIQA 1020
Cdd:COG3883 175 AQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAA 227
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
711-950 |
2.58e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.21 E-value: 2.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 711 EQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQE 790
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 791 MAIRSSQVENLQQ--ENGSLkkqvqkvkEQFLQQkvmVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEK 868
Cdd:COG3883 95 LYRSGGSVSYLDVllGSESF--------SDFLDR---LSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALK 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 869 QSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQ 948
Cdd:COG3883 164 AELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 243
|
..
gi 2024459673 949 KQ 950
Cdd:COG3883 244 AS 245
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
521-1005 |
2.75e-04 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 45.81 E-value: 2.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 521 LQKVQLERTTLTNKLKASETEITSLQNVRQWYQQ-QLVLAQEARVRLQSEMANIQAGQMTQAGVLEHLKLENVA----LS 595
Cdd:TIGR01612 1228 LEKIDEEKKKSEHMIKAMEAYIEDLDEIKEKSPEiENEMGIEMDIKAEMETFNISHDDDKDHHIISKKHDENISdireKS 1307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 596 QQLTETQHRS-----IK---EKERIAAQLQNIEADMLDQEAA----FMQIQEAKTMVEE--DLQRKLEEFE-------DE 654
Cdd:TIGR01612 1308 LKIIEDFSEEsdindIKkelQKNLLDAQKHNSDINLYLNEIAniynILKLNKIKKIIDEvkEYTKEIEENNknikdelDK 1387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 655 KEQLQKMADSAATLEQELDQVKLTLHQRDLQlESLQQehLDLMKQFTMTQE-----------------MLHTKEQTLDDL 717
Cdd:TIGR01612 1388 SEKLIKKIKDDINLEECKSKIESTLDDKDID-ECIKK--IKELKNHILSEEsnidtyfknadennenvLLLFKNIEMADN 1464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 718 QTQYdelkaRLEEFQSDATSKDDmiqYLQNEkivLEVALQTAKASQDQLDEGTKRlgedTEVTSEILEQLRQEMAIRSSQ 797
Cdd:TIGR01612 1465 KSQH-----ILKIKKDNATNDHD---FNINE---LKEHIDKSKGCKDEADKNAKA----IEKNKELFEQYKKDVTELLNK 1529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 798 VENLQQENGSlkKQVQKVKEQFLQQ-KVMVEAYRRDASSKDQLISELKATKKRLDSEM---KELKRELLQIQVEKQSLET 873
Cdd:TIGR01612 1530 YSALAIKNKF--AKTKKDSEIIIKEiKDAHKKFILEAEKSEQKIKEIKKEKFRIEDDAaknDKSNKAAIDIQLSLENFEN 1607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 874 EHSKLQkevtevhqqmvEIENHLQSVQKERDEMETRLQSLQFDKE--QMASLAEANQTLKLQVEQMQEEaKKAITEQKQK 951
Cdd:TIGR01612 1608 KFLKIS-----------DIKKKINDCLKETESIEKKISSFSIDSQdtELKENGDNLNSLQEFLESLKDQ-KKNIEDKKKE 1675
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 2024459673 952 MKRLGSDLTSAQKEMKAKHKAYEnaVSILSRRLQESLTAKESAEAELSKLKAQI 1005
Cdd:TIGR01612 1676 LDELDSEIEKIEIDVDQHKKNYE--IGIIEKIKEIAIANKEEIESIKELIEPTI 1727
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1080-1274 |
2.86e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 45.15 E-value: 2.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1080 INKKLALELEHERGKLTGLSQSNAALREHNNVLEtalAKREADlvQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEK 1159
Cdd:PRK12704 28 IAEAKIKEAEEEAKRILEEAKKEAEAIKKEALLE---AKEEIH--KLRNEFEKELRERRNELQKLEKRLLQKEENLDRKL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1160 SKVKDLKEqvaaakadaahnrrhyraaalELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQElaEARsql 1239
Cdd:PRK12704 103 ELLEKREE---------------------ELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISGLTAE--EAK--- 156
|
170 180 190
....*....|....*....|....*....|....*..
gi 2024459673 1240 QLLQKKLDDKLSEQP--LVSQEVEDLKWEVEQKEREI 1274
Cdd:PRK12704 157 EILLEKVEEEARHEAavLIKEIEEEAKEEADKKAKEI 193
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
377-1108 |
3.12e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 45.72 E-value: 3.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 377 THDEMLQVLKEKMRLEGQLE----------ALSAEANQALKEKAELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVAT 446
Cdd:PRK04863 308 RLVEMARELAELNEAESDLEqdyqaasdhlNLVQTALRQQEKIERYQADLEELEERLEEQNEVVEEADEQQEENEARAEA 387
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 447 LKQSCWDLERAMADLQNTLEAknaslassnndLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQSQLQkvql 526
Cdd:PRK04863 388 AEEEVDELKSQLADYQQALDV-----------QQTRAIQYQQAVQALERAKQLCGLPDLTADNAEDWLEEFQAKEQ---- 452
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 527 ertTLTNKLKASETEITSLQNVRQWYQQQLVLAQearvRLQSEMANIQAGQMTQAGVLEHLKLENVA-----LSQQLTET 601
Cdd:PRK04863 453 ---EATEELLSLEQKLSVAQAAHSQFEQAYQLVR----KIAGEVSRSEAWDVARELLRRLREQRHLAeqlqqLRMRLSEL 525
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 602 QHRSIKEK--ERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTL 679
Cdd:PRK04863 526 EQRLRQQQraERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAW 605
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 680 HQRDLQLESLQQ---EHL----DLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQN----- 747
Cdd:PRK04863 606 LAAQDALARLREqsgEEFedsqDVTEYMQQLLERERELTVERDELAARKQALDEEIERLSQPGGSEDPRLNALAErfggv 685
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 748 ------EKIVLEVA------------------LQTAKASQDQLD---------EGTKRLGEDTEVTSEILE--------- 785
Cdd:PRK04863 686 llseiyDDVSLEDApyfsalygparhaivvpdLSDAAEQLAGLEdcpedlyliEGDPDSFDDSVFSVEELEkavvvkiad 765
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 786 -QLRQEM---------AIRSSQVENLQQENGSLKKQ-------VQKVK------EQFLQQKVMV----------EAYRRD 832
Cdd:PRK04863 766 rQWRYSRfpevplfgrAAREKRIEQLRAEREELAERyatlsfdVQKLQrlhqafSRFIGSHLAVafeadpeaelRQLNRR 845
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 833 ASSKDQLISELKATKKRLDSEMKELKRELLQI-QVEKQSLETEHSKLQKEVTEVHQQMVEIE---NHLQSVQKERDEMET 908
Cdd:PRK04863 846 RVELERALADHESQEQQQRSQLEQAKEGLSALnRLLPRLNLLADETLADRVEEIREQLDEAEeakRFVQQHGNALAQLEP 925
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 909 RLQSLQFDKEQMAslaeanqtlklQVEQMQEEAKKAITEQKQKmKRLGSDLTSaqkemKAKHKAYENAVSILSRR--LQE 986
Cdd:PRK04863 926 IVSVLQSDPEQFE-----------QLKQDYQQAQQTQRDAKQQ-AFALTEVVQ-----RRAHFSYEDAAEMLAKNsdLNE 988
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 987 SLTAK-ESAEAELSKLKAQITdGGSNQIAQ--ERIQALETELQAVRSSKLMLEKELQEV-ISLTSQELEEYREKVLELED 1062
Cdd:PRK04863 989 KLRQRlEQAEQERTRAREQLR-QAQAQLAQynQVLASLKSSYDAKRQMLQELKQELQDLgVPADSGAEERARARRDELHA 1067
|
810 820 830 840
....*....|....*....|....*....|....*....|....*....
gi 2024459673 1063 ELQESRGfrrkikRLEEINKKLA---LELEHERGKLTGLSQSNAALREH 1108
Cdd:PRK04863 1068 RLSANRS------RRNQLEKQLTfceAEMDNLTKKLRKLERDYHEMREQ 1110
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
595-987 |
3.71e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 45.28 E-value: 3.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 595 SQQLTETQHRSIKEKERIAAQLQNIEADMLDQEAAfmqiqEAKTMVEedLQRKLEEFEDEKEQLQKMADSAATleqELDQ 674
Cdd:PLN02939 44 SQQKKKRGKNIAPKQRSSNSKLQSNTDENGQLENT-----SLRTVME--LPQKSTSSDDDHNRASMQRDEAIA---AIDN 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 675 VKLTLHQRDLQLESLQQEHLDLMKQFTMTQEML--HTKEQTLDDLQTQYDELKArleefqsdatskddmiqyLQNEKIVL 752
Cdd:PLN02939 114 EQQTNSKDGEQLSDFQLEDLVGMIQNAEKNILLlnQARLQALEDLEKILTEKEA------------------LQGKINIL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 753 EVALQTAKASQDQLDEGTKrlgeDTEVTSEILEQLRQEMAIRSS-----------QVENLQQENGSLKKQVQKVKEQFLQ 821
Cdd:PLN02939 176 EMRLSETDARIKLAAQEKI----HVEILEEQLEKLRNELLIRGAteglcvhslskELDVLKEENMLLKDDIQFLKAELIE 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 822 QKvmveayrrdasSKDQLISELKATKKRLDSEMKELKRELLQIQvekqsleTEHSKLQKEVTEVHQQMVEIENHLqsvqk 901
Cdd:PLN02939 252 VA-----------ETEERVFKLEKERSLLDASLRELESKFIVAQ-------EDVSKLSPLQYDCWWEKVENLQDL----- 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 902 erdemetrLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQ---------KQKMKRLGSDLTSAQKEMKAKHKA 972
Cdd:PLN02939 309 --------LDRATNQVEKAALVLDQNQDLRDKVDKLEASLKEANVSKfssykvellQQKLKLLEERLQASDHEIHSYIQL 380
|
410
....*....|....*....
gi 2024459673 973 YENAVS----ILSRRLQES 987
Cdd:PLN02939 381 YQESIKefqdTLSKLKEES 399
|
|
| ClyA_Cry6Aa-like |
cd22656 |
Bacillus thuringiensis crystal 6Aa (Cry6Aa) toxin, and similar proteins; This model includes ... |
1203-1340 |
3.73e-04 |
|
Bacillus thuringiensis crystal 6Aa (Cry6Aa) toxin, and similar proteins; This model includes pesticidal Cry6Aa toxin from Bacillus thuringiensis, one of the many parasporal crystal (Cry) toxins produced during the sporulation phase of growth. Many of these proteins are toxic to numerous insect species and have been effectively used as proteinaceous insecticides to directly kill insect pests; some have been used to control insect growth on transgenic agricultural plants. Cry6Aa exists as a protoxin, which is activated by cleavage using trypsin. Structure studies for Cry6Aa support a mechanism of action by pore formation, similar to cytolysin A (ClyA)-type alpha pore-forming toxins (alpha-PFTs) such as HblB, and bioassay and mutation studies show that Cry6Aa is an active pore-forming toxin. Cry6Aa shows atypical features compared to other members of alpha-PFTs, including internal repeat sequences and small loop regions within major alpha helices.
Pssm-ID: 439154 [Multi-domain] Cd Length: 309 Bit Score: 44.28 E-value: 3.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1203 LVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSE--QPLVSQEVEDLKWEVEQKEREIGT-LKQ 1279
Cdd:cd22656 122 LLDDLLKEAKKYQDKAAKVVDKLTDFENQTEKDQTALETLEKALKDLLTDegGAIARKEIKDLQKELEKLNEEYAAkLKA 201
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024459673 1280 QLDmseqrshkelegmqvvlqniktELEVVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQ 1340
Cdd:cd22656 202 KID----------------------ELKALIADDEAKLAAALRLIADLTAADTDLDNLLAL 240
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
898-1258 |
3.78e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 45.35 E-value: 3.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 898 SVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKrlgsdLTSAQKEMKAKHKAYENAv 977
Cdd:pfam02463 163 AGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEK-----LELEEEYLLYLDYLKLNE- 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 978 silsrRLQESLTAKESAEAELSKLKAQItdggsnqiaQERIQALETELQAVRSSKLMLEKELQEVISLTSQELEeyrEKV 1057
Cdd:pfam02463 237 -----ERIDLLQELLRDEQEEIESSKQE---------IEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEE---ELK 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1058 LELEDELQESRGFRRKIKRLEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALAKREADLVQLNLQVQAVLKRK 1137
Cdd:pfam02463 300 SELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKK 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1138 EEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQVE 1217
Cdd:pfam02463 380 KLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELK 459
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2024459673 1218 DEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQ 1258
Cdd:pfam02463 460 LLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQ 500
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
379-581 |
4.00e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.37 E-value: 4.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 379 DEMLQVLKEKMRLEGQLEALSAEANQALKEKAELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVATLKQSCWDLERAm 458
Cdd:COG4942 41 KELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQ- 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 459 ADLQNTLEAKNASLASSNndLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQSQLQKVQLERTTLTNKLKAS 538
Cdd:COG4942 120 PPLALLLSPEDFLDAVRR--LQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAER 197
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2024459673 539 ETEITSLQNVRQWYQQQLVLAQEARVRLQSEMANIQAGQMTQA 581
Cdd:COG4942 198 QKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| Macoilin |
pfam09726 |
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 ... |
867-1281 |
4.14e-04 |
|
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 trasnmembrane helices, followed by a C-terminal coiled-coil region. Macoilin is a highly conserved protein present in eukaryotes. Macoilin appears to be found in the ER and be involved in the function of neurons.
Pssm-ID: 462859 [Multi-domain] Cd Length: 670 Bit Score: 44.84 E-value: 4.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 867 EKQSLETEHSKLQkEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMA-SLAEANQTLKLQVEQMQEEAKKAI 945
Cdd:pfam09726 264 SKKSHNHNIHNLN-HVDSKLQEKEYMENHSNSKRLNISTSPGSEEDLLVRESVSSkSSSSSSSSNKNYKNASGGSANSSN 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 946 TEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQES-----LTAKESA----EAELSKLKAQITdgGSNQIAQE 1016
Cdd:pfam09726 343 SSPRSHSHNSGSVTSSSSSKNSKKQKGPGGKSGARHKDPAENcipnnQLSKPDAlvrlEQDIKKLKAELQ--ASRQTEQE 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1017 -RIQ---------ALETELQAVRSSKLMLEKELQEVISLTSQEleeyREKVLELEDELQESRGFRRKIKRLeeinkklaL 1086
Cdd:pfam09726 421 lRSQissltslerSLKSELGQLRQENDLLQTKLHNAVSAKQKD----KQTVQQLEKRLKAEQEARASAEKQ--------L 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1087 ELEHERGKLtglsqsnaalrehnnvlETALAKREAdlvqlnlqVQAVLKRKEEEDQqMQQLIQALQASLEKEKSKVKDLK 1166
Cdd:pfam09726 489 AEEKKRKKE-----------------EEATAARAV--------ALAAASRGECTES-LKQRKRELESEIKKLTHDIKLKE 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1167 EQVaaakadaahnrRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSqevsqfqqelAEARSQLQLLQKKL 1246
Cdd:pfam09726 543 EQI-----------RELEIKVQELRKYKESEKDTEVLMSALSAMQDKNQHLENSLS----------AETRIKLDLFSALG 601
|
410 420 430
....*....|....*....|....*....|....*
gi 2024459673 1247 DDKlseqplvsQEVEDLKWEVEQKEREIGTLKQQL 1281
Cdd:pfam09726 602 DAK--------RQLEIAQGQIYQKDQEIKDLKQKI 628
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
683-882 |
4.18e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 44.62 E-value: 4.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 683 DLQLESLQQEhLDLMKQFTMTQEMLhtKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVAL------ 756
Cdd:PHA02562 187 DMKIDHIQQQ-IKTYNKNIEEQRKK--NGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSAALnklnta 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 757 QTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKK------QVQKVKEQFLQQKVMVEAYR 830
Cdd:PHA02562 264 AAKIKSKIEQFQKVIKMYEKGGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKldtaidELEEIMDEFNEQSKKLLELK 343
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2024459673 831 RDASSKDQLISELKATKKRLDSEMKEL-------KRELLQIQVEKQSLETEHSKLQKEV 882
Cdd:PHA02562 344 NKISTNKQSLITLVDKAKKVKAAIEELqaefvdnAEELAKLQDELDKIVKTKSELVKEK 402
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
400-720 |
4.66e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 44.90 E-value: 4.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 400 AEANQALKEKAELQAQLAALNMK---------LQAQVEHSQSSQQKQESLSSEVATLKQSCWDLERAMADLQNTLEAKNA 470
Cdd:PRK11281 29 AASNGDLPTEADVQAQLDALNKQklleaedklVQQDLEQTLALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKD 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 471 SLASSnndlqlAEEQYQRLMLKvedmqksvltrdstvhDLRQQLASLQSQLQKVQLERTTLTNKLKASETEITSLQNVRQ 550
Cdd:PRK11281 109 DNDEE------TRETLSTLSLR----------------QLESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALY 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 551 WYQQQLvlaQEARVRLQSEMANIQAGQMTQAGVLE-HLKLENVALSQQLTETQHRSikekeriaaQLQNIEADMLDQEAA 629
Cdd:PRK11281 167 ANSQRL---QQIRNLLKGGKVGGKALRPSQRVLLQaEQALLNAQNDLQRKSLEGNT---------QLQDLLQKQRDYLTA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 630 fmQIQEAKTMVeEDLQ-----RKLEEFEDEKEQLQKMADSAAT-----LEQELDqVKLTLHQRDLQleslQQEHLDlmkq 699
Cdd:PRK11281 235 --RIQRLEHQL-QLLQeainsKRLTLSEKTVQEAQSQDEAARIqanplVAQELE-INLQLSQRLLK----ATEKLN---- 302
|
330 340
....*....|....*....|..
gi 2024459673 700 fTMTQEMLHTKeQTLDDL-QTQ 720
Cdd:PRK11281 303 -TLTQQNLRVK-NWLDRLtQSE 322
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
792-1296 |
4.89e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 44.94 E-value: 4.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 792 AIRSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKD---QLISE----LKATKKRLDSEMKELKRELLqi 864
Cdd:COG3096 211 AITRSLRDYLLPENSGVRKAFQDMEAALRENRMTLEAIRVTQSDRDlfkHLITEatnyVAADYMRHANERRELSERAL-- 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 865 qvekqSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSlqfdkeqmaslaeANQTLKLQVEQMQeeakka 944
Cdd:COG3096 289 -----ELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQA-------------ASDHLNLVQTALR------ 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 945 iteQKQKMKRLGSDLTSAQKEMKAKHKAYENAvsilSRRLQESLTAKESAEAELSKLKAQITDggsnqiAQERIQALETE 1024
Cdd:COG3096 345 ---QQEKIERYQEDLEELTERLEEQEEVVEEA----AEQLAEAEARLEAAEEEVDSLKSQLAD------YQQALDVQQTR 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1025 L----QAVRSskLMLEKELQEVISLTSQELEEYREKVLELEDELQESRgfrrkikrleeinkklaLELEHErgkltgLSQ 1100
Cdd:COG3096 412 AiqyqQAVQA--LEKARALCGLPDLTPENAEDYLAAFRAKEQQATEEV-----------------LELEQK------LSV 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1101 SNAALREHNNVLEtaLAKREADLV---QLNLQVQAVLKRKEEEDQQMQQLiQALQASL-EKEKskvkDLKEQVAAAKADA 1176
Cdd:COG3096 467 ADAARRQFEKAYE--LVCKIAGEVersQAWQTARELLRRYRSQQALAQRL-QQLRAQLaELEQ----RLRQQQNAERLLE 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1177 AHNRRHYR--AAALELnevkkelhakELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKK------LDD 1248
Cdd:COG3096 540 EFCQRIGQqlDAAEEL----------EELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARapawlaAQD 609
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 2024459673 1249 KL------SEQPLV-SQEVEDLKWEVEQKEREIGTLKQQLDMSEQRSHKELEGMQ 1296
Cdd:COG3096 610 ALerlreqSGEALAdSQEVTAAMQQLLEREREATVERDELAARKQALESQIERLS 664
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1055-1359 |
5.17e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 44.96 E-value: 5.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1055 EKVLELEDELQESRGFRRKIKRLEE-------INKKLALELEHERGKLTGLSQSNAALREHNNVLETALAKREADLVQLN 1127
Cdd:pfam02463 153 ERRLEIEEEAAGSRLKRKKKEALKKlieetenLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYL 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1128 LQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQAL 1207
Cdd:pfam02463 233 KLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDD 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1208 QAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQKEREIGTLKQQLDMSEQR 1287
Cdd:pfam02463 313 EEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKL 392
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024459673 1288 SHKELEGMQVVLQNIKTELEVVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQLKMDLKHGKMKKRKGE 1359
Cdd:pfam02463 393 KEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDE 464
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
1018-1307 |
5.22e-04 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 44.46 E-value: 5.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1018 IQALETELQAvrssklmLEKELQEVISLTSQ-ELEEYREKVLELEDELQEsrgFRRKIKRLEEINKKLALELEHERGKLT 1096
Cdd:pfam06160 148 IDELEKQLAE-------IEEEFSQFEELTESgDYLEAREVLEKLEEETDA---LEELMEDIPPLYEELKTELPDQLEELK 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1097 G----LSQSNAALrEHNNV------LETALAKREADLVQLNLqvqavlKRKEEEDQQMQQLIQALQASLEKEKSKVKDLK 1166
Cdd:pfam06160 218 EgyreMEEEGYAL-EHLNVdkeiqqLEEQLEENLALLENLEL------DEAEEALEEIEERIDQLYDLLEKEVDAKKYVE 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1167 EQVAAAKADAAHNRRHYRAAALELNEVKK--ELHAKELlvqalqaevdklqvedekhsQEVSQFQQELAEARSQLQLLQK 1244
Cdd:pfam06160 291 KNLPEIEDYLEHAEEQNKELKEELERVQQsyTLNENEL--------------------ERVRGLEKQLEELEKRYDEIVE 350
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024459673 1245 KLDDKLSEQPLVSQEVEDLKWEVEQKEREIGTLKQQLDM---SEQRSHKELEGMQVVLQNIKTELE 1307
Cdd:pfam06160 351 RLEEKEVAYSELQEELEEILEQLEEIEEEQEEFKESLQSlrkDELEAREKLDEFKLELREIKRLVE 416
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
784-1059 |
5.29e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.12 E-value: 5.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 784 LEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQ 863
Cdd:COG4372 40 LDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEE 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 864 IQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMaSLAEANQTLKLQVEQMQEEAKK 943
Cdd:COG4372 120 LQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQAL-SEAEAEQALDELLKEANRNAEK 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 944 AITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQITDGGSNQIAQERIQALET 1023
Cdd:COG4372 199 EEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEEL 278
|
250 260 270
....*....|....*....|....*....|....*.
gi 2024459673 1024 ELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLE 1059
Cdd:COG4372 279 EIAALELEALEEAALELKLLALLLNLAALSLIGALE 314
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1014-1247 |
6.24e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 44.23 E-value: 6.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1014 AQERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVlelEDELQESRGFRRKIKRLEEINKKLALELEHERG 1093
Cdd:PHA02562 179 LNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKY---DELVEEAKTIKAEIEELTDELLNLVMDIEDPSA 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1094 KLTGLSQSNAALREhnnvlETALAKREADLVQLNLQVQAVLKRKEEEDQQMQQL---IQALQASLEKEKSKVKDLKEQVA 1170
Cdd:PHA02562 256 ALNKLNTAAAKIKS-----KIEQFQKVIKMYEKGGVCPTCTQQISEGPDRITKIkdkLKELQHSLEKLDTAIDELEEIMD 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1171 AakadaahnrrhYRAAALELNEVKKELHAKELLVQAL-------QAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQ 1243
Cdd:PHA02562 331 E-----------FNEQSKKLLELKNKISTNKQSLITLvdkakkvKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELV 399
|
....
gi 2024459673 1244 KKLD 1247
Cdd:PHA02562 400 KEKY 403
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
797-971 |
6.44e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.99 E-value: 6.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 797 QVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELK--RELLQIQVEKQSLETE 874
Cdd:COG1579 25 RLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRnnKEYEALQKEIESLKRR 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 875 HSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQfdkeqmaslaeanQTLKLQVEQMQEEAKKAITEQKQKMKR 954
Cdd:COG1579 105 ISDLEDEILELMERIEELEEELAELEAELAELEAELEEKK-------------AELDEELAELEAELEELEAEREELAAK 171
|
170
....*....|....*..
gi 2024459673 955 LGSDLTSAQKEMKAKHK 971
Cdd:COG1579 172 IPPELLALYERIRKRKN 188
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1038-1288 |
7.41e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.24 E-value: 7.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1038 ELQEVISLTSQELEEYREKVLELEDELQEsrgFRRKIKrleeinkklalelehergkLTGLSQSNAALREHNNVLETALA 1117
Cdd:COG3206 172 EARKALEFLEEQLPELRKELEEAEAALEE---FRQKNG-------------------LVDLSEEAKLLLQQLSELESQLA 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1118 KREADLVQLNLQVQAVLKRKEEEDQQMQQLIQAlqaslekekSKVKDLKEQvaaakadaahnrrhYRAAALELNEVKKEL 1197
Cdd:COG3206 230 EARAELAEAEARLAALRAQLGSGPDALPELLQS---------PVIQQLRAQ--------------LAELEAELAELSARY 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1198 HAKELLVQALQAEVDKLQVEDEKHSQEV-SQFQQELAEARSQLQLLQKKLDD---KLSEQPLVSQEVEDLKWEVEQKERE 1273
Cdd:COG3206 287 TPNHPDVIALRAQIAALRAQLQQEAQRIlASLEAELEALQAREASLQAQLAQleaRLAELPELEAELRRLEREVEVAREL 366
|
250
....*....|....*
gi 2024459673 1274 IGTLKQQLDMSEQRS 1288
Cdd:COG3206 367 YESLLQRLEEARLAE 381
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
701-969 |
7.78e-04 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 43.36 E-value: 7.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 701 TMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVT 780
Cdd:COG1340 4 DELSSSLEELEEKIEELREEIEELKEKRDELNEELKELAEKRDELNAQVKELREEAQELREKRDELNEKVKELKEERDEL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 781 SEILEQLRQEMAIRSSQVENLQQENGS---LKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLD--SEMK 855
Cdd:COG1340 84 NEKLNELREELDELRKELAELNKAGGSidkLRKEIERLEWRQQTEVLSPEEEKELVEKIKELEKELEKAKKALEknEKLK 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 856 ELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMetrlqslqfdKEQMASLAEANQTLKLQVE 935
Cdd:COG1340 164 ELRAELKELRKEAEEIHKKIKELAEEAQELHEEMIELYKEADELRKEADEL----------HKEIVEAQEKADELHEEII 233
|
250 260 270
....*....|....*....|....*....|....*..
gi 2024459673 936 QMQEEAK---KAITEQKQKMKRLGSDLTSAQKEMKAK 969
Cdd:COG1340 234 ELQKELRelrKELKKLRKKQRALKREKEKEELEEKAE 270
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
915-1166 |
8.09e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 43.76 E-value: 8.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 915 FDKEQMASLAEANQTLKL-QVEQMQEE--------AKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAyenavsilsrRLQ 985
Cdd:PRK05771 13 TLKSYKDEVLEALHELGVvHIEDLKEElsnerlrkLRSLLTKLSEALDKLRSYLPKLNPLREEKKKV----------SVK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 986 ESLTAKESAEAELSKLKAQITDggsnqiAQERIQALETELQAvrssklmLEKELQEVISLTSqeleeyrekvLELEDE-L 1064
Cdd:PRK05771 83 SLEELIKDVEEELEKIEKEIKE------LEEEISELENEIKE-------LEQEIERLEPWGN----------FDLDLSlL 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1065 QESRGFRRKIKRLEEiNKKLALELEHERGKLTGLSQSN-------AALREHNNVLETALAKREADLVQLNLQ--VQAVLK 1135
Cdd:PRK05771 140 LGFKYVSVFVGTVPE-DKLEELKLESDVENVEYISTDKgyvyvvvVVLKELSDEVEEELKKLGFERLELEEEgtPSELIR 218
|
250 260 270
....*....|....*....|....*....|.
gi 2024459673 1136 RKEEEDQQMQQLIQALQASLEKEKSKVKDLK 1166
Cdd:PRK05771 219 EIKEELEEIEKERESLLEELKELAKKYLEEL 249
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1186-1307 |
9.81e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.61 E-value: 9.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1186 AALELNEVKKEL--HAKELLVQAlQAEVDKLQVEDEKhsqEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDL 1263
Cdd:PRK12704 40 AKRILEEAKKEAeaIKKEALLEA-KEEIHKLRNEFEK---ELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKK 115
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2024459673 1264 KWEVEQKEREIGTLKQQLDMSEQRSHKELE---GM------QVVLQNIKTELE 1307
Cdd:PRK12704 116 EKELEQKQQELEKKEEELEELIEEQLQELErisGLtaeeakEILLEKVEEEAR 168
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
384-884 |
1.04e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 43.56 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 384 VLKEKMRLEGQLEALSAEANQALKEKAE----LQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVATLKQS--------- 450
Cdd:pfam05483 262 LLEESRDKANQLEEKTKLQDENLKELIEkkdhLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEkeaqmeeln 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 451 ---------CWDLERAMADLQNTLEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQSQL 521
Cdd:pfam05483 342 kakaahsfvVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLL 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 522 -QKVQLERttLTNKLKASETEITSLQNVRQWYQQQLVLaQEARVRLQSEMANIQAGQMTQAgvLEHLKLENVAL---SQQ 597
Cdd:pfam05483 422 dEKKQFEK--IAEELKGKEQELIFLLQAREKEIHDLEI-QLTAIKTSEEHYLKEVEDLKTE--LEKEKLKNIELtahCDK 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 598 LTETQHRSIKEKERIAAQLQNIEADMLDQEAafmqiQEAKTMVE-EDLQRKLEEFEDEKEQLQKmadsaaTLEQELDQVK 676
Cdd:pfam05483 497 LLLENKELTQEASDMTLELKKHQEDIINCKK-----QEERMLKQiENLEEKEMNLRDELESVRE------EFIQKGDEVK 565
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 677 LTLHQRDLQLESLQQEHLDLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVAL 756
Cdd:pfam05483 566 CKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELEL 645
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 757 QTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQE-----NGSLKKQVQKVKEQFLQQKVMVEAYRR 831
Cdd:pfam05483 646 ASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEidkrcQHKIAEMVALMEKHKHQYDKIIEERDS 725
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 2024459673 832 DASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTE 884
Cdd:pfam05483 726 ELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKE 778
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
593-1257 |
1.23e-03 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 43.59 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 593 ALSQQlTETQHRSIKEKERIAAQLQNIEADMLDQEAAFmqiqEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQEL 672
Cdd:pfam07111 60 ALSQQ-AELISRQLQELRRLEEEVRLLRETSLQQKMRL----EAQAMELDALAVAEKAGQAEAEGLRAALAGAEMVRKNL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 673 DQVK-------LTLHQRdlQLESLQQEHLDLMKQFTMTQEMLhtkEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYL 745
Cdd:pfam07111 135 EEGSqreleeiQRLHQE--QLSSLTQAHEEALSSLTSKAEGL---EKSLNSLETKRAGEAKQLAEAQKEAELLRKQLSKT 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 746 QNE---KIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQFLQQ 822
Cdd:pfam07111 210 QEEleaQVTLVESLRKYVGEQVPPEVHSQTWELERQELLDTMQHLQEDRADLQATVELLQVRVQSLTHMLALQEEELTRK 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 823 KVMVEAYRRDASSKDQliSELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQ--SVQ 900
Cdd:pfam07111 290 IQPSDSLEPEFPKKCR--SLLNRWREKVFALMVQLKAQDLEHRDSVKQLRGQVAELQEQVTSQSQEQAILQRALQdkAAE 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 901 KERDEMETRLQSLQFDKEQmaslaEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQkEMKAKHKAYENAVSIL 980
Cdd:pfam07111 368 VEVERMSAKGLQMELSRAQ-----EARRRQQQQTASAEEQLKFVVNAMSSTQIWLETTMTRVE-QAVARIPSLSNRLSYA 441
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 981 SRRLQ--ESLTAKESAEAELSKLKAQITDGGSNQIAQeriqaLETELQAVRSSKLMLEKELQEVISLTSQELEEYREkvl 1058
Cdd:pfam07111 442 VRKVHtiKGLMARKVALAQLRQESCPPPPPAPPVDAD-----LSLELEQLREERNRLDAELQLSAHLIQQEVGRARE--- 513
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1059 ELEDELQesrgfrrkikRLEEINKKLALELEHERGKLTGLSQS-NAALREHNNVLETALAKReadlvqlnlqvqavlkrk 1137
Cdd:pfam07111 514 QGEAERQ----------QLSEVAQQLEQELQRAQESLASVGQQlEVARQGQQESTEEAASLR------------------ 565
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1138 EEEDQQMQQLIQALQASLEKEKSKvkdLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQVE 1217
Cdd:pfam07111 566 QELTQQQEIYGQALQEKVAEVETR---LREQLSDTKRRLNEARREQAKAVVSLRQIQHRATQEKERNQELRRLQDEARKE 642
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 2024459673 1218 DekhSQEVSQFQQELAEARSQL--QLLQKKLDDKLSEQPLVS 1257
Cdd:pfam07111 643 E---GQRLARRVQELERDKNLMlaTLQQEGLLSRYKQQRLLA 681
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
840-984 |
1.34e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.22 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 840 ISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENH--LQSVQKERDEMETRLQSLqfdK 917
Cdd:COG1579 33 LAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNkeYEALQKEIESLKRRISDL---E 109
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024459673 918 EQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRL 984
Cdd:COG1579 110 DEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAKIPPEL 176
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
832-1031 |
1.41e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.89 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 832 DASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIEnhlQSVQKERDEMETRLQ 911
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAE---AEIEERREELGERAR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 912 SLQ------------FDKEQMASLAEANQTLKLQVEQM------QEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAY 973
Cdd:COG3883 94 ALYrsggsvsyldvlLGSESFSDFLDRLSALSKIADADadlleeLKADKAELEAKKAELEAKLAELEALKAELEAAKAEL 173
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2024459673 974 ENAVSILSRRLQESLTAKESAEAELSKLKAQITDGGSNQIAQERIQALETELQAVRSS 1031
Cdd:COG3883 174 EAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAA 231
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
824-1069 |
1.95e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.54 E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 824 VMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVtevhQQMVEIENHLQSVQKER 903
Cdd:COG2433 399 REKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLERELSEARSEE----RREIRKDREISRLDREI 474
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 904 DEMETRLQSLQfdkeqmaslaEANQTLKLQVEQMQEEAKKAITEQKQKMKRLgSDLTSaqKEMKAKHKAYENA------- 976
Cdd:COG2433 475 ERLERELEEER----------ERIEELKRKLERLKELWKLEHSGELVPVKVV-EKFTK--EAIRRLEEEYGLKegdvvyl 541
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 977 --VSILSRRlqeslTAKESAEAelsKLKAQITDGGSNQIAQE--------RIQALETELQAVRSSKLMLEKELQEVISLT 1046
Cdd:COG2433 542 rdASGAGRS-----TAELLAEA---GPRAVIVPGELSEAADEvlfeegipVLPAEDVTIQEVDDLAVVDEEELEAAIEDW 613
|
250 260
....*....|....*....|....*...
gi 2024459673 1047 SQELEEYR-----EKVLELEDELQESRG 1069
Cdd:COG2433 614 EERAEERRrekkaEMLERLISEYRAERR 641
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
632-854 |
2.00e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.70 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 632 QIQEAKTMVEEdLQRKLEEFEdEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQEHLDLMKQFTMTQEMLHTKE 711
Cdd:COG3206 183 QLPELRKELEE-AEAALEEFR-QKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELL 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 712 Q--TLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAkasqdqldegtkrlgedtevTSEILEQLRQ 789
Cdd:COG3206 261 QspVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQE--------------------AQRILASLEA 320
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024459673 790 EMAIRSSQVENLQQENGSLKKQVQKVKEQFLQQKVMveayRRDASSKDQLISELKATKKRLDSEM 854
Cdd:COG3206 321 ELEALQAREASLQAQLAQLEARLAELPELEAELRRL----EREVEVARELYESLLQRLEEARLAE 381
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
834-1167 |
2.63e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.81 E-value: 2.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 834 SSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSL 913
Cdd:COG4372 27 AALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 914 QFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKES 993
Cdd:COG4372 107 QEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALD 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 994 AEAELSKLKAQITDGGSNQIaQERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLELEDELQESRGFRRK 1073
Cdd:COG4372 187 ELLKEANRNAEKEEELAEAE-KLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELEL 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1074 IKRLEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQA 1153
Cdd:COG4372 266 AILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQL 345
|
330
....*....|....
gi 2024459673 1154 SLEKEKSKVKDLKE 1167
Cdd:COG4372 346 LLVGLLDNDVLELL 359
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1188-1345 |
2.66e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.06 E-value: 2.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1188 LELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVS--QEVEDLKW 1265
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRnnKEYEALQK 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1266 EVEQKEREIGTLKQQldmsEQRSHKELEGMQVVLQNIKTELEVVREDLSVTQKDkfmLQAKVSELKNSMKSLLQQNQQLK 1345
Cdd:COG1579 97 EIESLKRRISDLEDE----ILELMERIEELEEELAELEAELAELEAELEEKKAE---LDEELAELEAELEELEAEREELA 169
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1185-1345 |
2.90e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 2.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1185 AAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLK 1264
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1265 WEVEQKEREIGTLKQQLDMSEQRSH--------------KELEGMQVVLQNIKTELEVVREDLSVTQKDKFMLQAKVSEL 1330
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPPlalllspedfldavRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170
....*....|....*
gi 2024459673 1331 KNSMKSLLQQNQQLK 1345
Cdd:COG4942 177 EALLAELEEERAALE 191
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1189-1344 |
2.91e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.31 E-value: 2.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1189 ELNEVKKELHAKELLVQALQAEVDKLQVEDEKH---------SQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQ- 1258
Cdd:COG3206 183 QLPELRKELEEAEAALEEFRQKNGLVDLSEEAKlllqqlselESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQs 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1259 -EVEDLKWEVEQKEREIGTLKQQLdmseQRSHKELEGMQVVLQNIKTELEV-VREDLSVTQKDKFMLQAKVSELKNSMKS 1336
Cdd:COG3206 263 pVIQQLRAQLAELEAELAELSARY----TPNHPDVIALRAQIAALRAQLQQeAQRILASLEAELEALQAREASLQAQLAQ 338
|
....*...
gi 2024459673 1337 LLQQNQQL 1344
Cdd:COG3206 339 LEARLAEL 346
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
584-904 |
3.02e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.81 E-value: 3.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 584 LEHLKLENVALSQQLTETQHRSIKEKERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMAD 663
Cdd:COG4372 15 LFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 664 SAATLEQELDQVKLTLHQRDLQLESLQQEHLDLMKQFTMTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQ 743
Cdd:COG4372 95 ELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQ 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 744 YLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQV-QKVKEQFLQQ 822
Cdd:COG4372 175 ALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALElEEDKEELLEE 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 823 KVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKE 902
Cdd:COG4372 255 VILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAI 334
|
..
gi 2024459673 903 RD 904
Cdd:COG4372 335 LL 336
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
395-821 |
3.13e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 42.03 E-value: 3.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 395 LEALSAEANQALKEKAELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVATLKQSCWDLERAMADLQNTLEAKNASLAS 474
Cdd:pfam15921 414 IDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLES 493
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 475 SnndlqlaEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQSQLQKVQLERTTLTN---KLKASETEITSLQNVRQW 551
Cdd:pfam15921 494 S-------ERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNvqtECEALKLQMAEKDKVIEI 566
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 552 YQQQLvlaqEARVRLQSemaniQAGQMTQAGVLEHLKLENVALSQQLTETQHRSIKEKERiaAQLQNIEADMLDQEAAFM 631
Cdd:pfam15921 567 LRQQI----ENMTQLVG-----QHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKD--AKIRELEARVSDLELEKV 635
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 632 QIQEAKTmveeDLQRKLEEFEDEKEQL----QKMADSAATLEQELDQVKLTLHQRDLQLESLQQEhldLMKQFTMTQEML 707
Cdd:pfam15921 636 KLVNAGS----ERLRAVKDIKQERDQLlnevKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNK---LKMQLKSAQSEL 708
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 708 HTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQL 787
Cdd:pfam15921 709 EQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKM 788
|
410 420 430
....*....|....*....|....*....|....
gi 2024459673 788 RQEMAIRSSQVENLQQENGSLKKQVQKVKEQFLQ 821
Cdd:pfam15921 789 AGELEVLRSQERRLKEKVANMEVALDKASLQFAE 822
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1147-1342 |
3.22e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.06 E-value: 3.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1147 LIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVS 1226
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1227 QFQ--QELAEARSQLQLLQKKLDDKLSEQplvsQEVEDLKWEVEQKEREIGTLKQQLDMSEQR----SHKELEGMQVVLQ 1300
Cdd:COG4717 127 LLPlyQELEALEAELAELPERLEELEERL----EELRELEEELEELEAELAELQEELEELLEQlslaTEEELQDLAEELE 202
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 2024459673 1301 NIKTELEVVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQ 1342
Cdd:COG4717 203 ELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEER 244
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1142-1307 |
3.43e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.68 E-value: 3.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1142 QQMQQLI--QALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQ---- 1215
Cdd:COG1579 4 EDLRALLdlQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEeqlg 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1216 -VEDEKhsqEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQKEREIGTLKQQLDMSEQRSHKELEG 1294
Cdd:COG1579 84 nVRNNK---EYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEE 160
|
170
....*....|...
gi 2024459673 1295 MQVVLQNIKTELE 1307
Cdd:COG1579 161 LEAEREELAAKIP 173
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
1014-1168 |
3.93e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 41.74 E-value: 3.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1014 AQERIQALETELQAVRSSKLMLEKELQEvislTSQELEEYREKVLELEDELQEsrgfrrKIKRLEEINKKLALELEHErg 1093
Cdd:PRK00409 507 AKKLIGEDKEKLNELIASLEELERELEQ----KAEEAEALLKEAEKLKEELEE------KKEKLQEEEDKLLEEAEKE-- 574
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024459673 1094 kltglsqSNAALREhnnvletalAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQ 1168
Cdd:PRK00409 575 -------AQQAIKE---------AKKEADEIIKELRQLQKGGYASVKAHELIEARKRLNKANEKKEKKKKKQKEK 633
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
625-926 |
4.09e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.87 E-value: 4.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 625 DQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKL----TLHQR----DLQLESLQQEHLDL 696
Cdd:PRK04863 834 DPEAELRQLNRRRVELERALADHESQEQQQRSQLEQAKEGLSALNRLLPRLNLladeTLADRveeiREQLDEAEEAKRFV 913
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 697 mKQFTMTQEMLHTKEQTLDDLQTQYDELKArleefqsdatskddmiQYLQNEKivlevALQTAKASQDQLDEGTKRL--- 773
Cdd:PRK04863 914 -QQHGNALAQLEPIVSVLQSDPEQFEQLKQ----------------DYQQAQQ-----TQRDAKQQAFALTEVVQRRahf 971
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 774 -----GEDTEVTSEILEQLRQemairssQVENLQQENGSLKKQVQKVKEQFLQqkvmveayrrdassKDQLISELKATKK 848
Cdd:PRK04863 972 syedaAEMLAKNSDLNEKLRQ-------RLEQAEQERTRAREQLRQAQAQLAQ--------------YNQVLASLKSSYD 1030
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 849 RLDSEMKELKRELLQIQV-----EKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASL 923
Cdd:PRK04863 1031 AKRQMLQELKQELQDLGVpadsgAEERARARRDELHARLSANRSRRNQLEKQLTFCEAEMDNLTKKLRKLERDYHEMREQ 1110
|
...
gi 2024459673 924 AEA 926
Cdd:PRK04863 1111 VVN 1113
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
863-993 |
4.46e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 41.74 E-value: 4.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 863 QIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQfdkeqmASLAEANQTLKLQVEQMQEEAK 942
Cdd:PRK00409 510 LIGEDKEKLNELIASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQ------EEEDKLLEEAEKEAQQAIKEAK 583
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2024459673 943 KAITEQKQKMKRLGSDLTSAQK--EMKAKHKAYENAVSILSRRLQESLTAKES 993
Cdd:PRK00409 584 KEADEIIKELRQLQKGGYASVKahELIEARKRLNKANEKKEKKKKKQKEKQEE 636
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
1189-1308 |
4.82e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 41.10 E-value: 4.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1189 ELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQ---ELAEARSQLQLLQKKLDDKLSEQPLVSQE----VE 1261
Cdd:PRK09039 61 QIAELADLLSLERQGNQDLQDSVANLRASLSAAEAERSRLQAllaELAGAGAAAEGRAGELAQELDSEKQVSARalaqVE 140
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 2024459673 1262 DLKWEVEQKEREIGTLKQQLDMSEQRShkelEGMQVVLQNIKTELEV 1308
Cdd:PRK09039 141 LLNQQIAALRRQLAALEAALDASEKRD----RESQAKIADLGRRLNV 183
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
382-612 |
5.83e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 41.44 E-value: 5.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 382 LQVLKEKMRLEGQLEALSAEANQALKEKAELQAQLAALNMKLQAQVEhsqssqqkQESLSSEVATLKQSCWDLERAMADL 461
Cdd:PRK11281 69 LALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETR--------ETLSTLSLRQLESRLAQTLDQLQNA 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 462 QNTLEAKNASLASsnndLQLAEEQYQ-------------RLMLKVEDMQKSVLTrdstvHDLRQQLASLQSQL-QKVQLE 527
Cdd:PRK11281 141 QNDLAEYNSQLVS----LQTQPERAQaalyansqrlqqiRNLLKGGKVGGKALR-----PSQRVLLQAEQALLnAQNDLQ 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 528 RTTLTNklkaseteITSLQNVrqwYQQQLVLAQEARVRLQSEMANIQagqmtqagvlEHLKLENVALSQQlTETQHRSIK 607
Cdd:PRK11281 212 RKSLEG--------NTQLQDL---LQKQRDYLTARIQRLEHQLQLLQ----------EAINSKRLTLSEK-TVQEAQSQD 269
|
....*
gi 2024459673 608 EKERI 612
Cdd:PRK11281 270 EAARI 274
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
398-629 |
6.01e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 6.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 398 LSAEANQALKEKAELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVAtlkqscwDLERAMADLQNTLEAKNASLASSNN 477
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLA-------ALERRIAALARRIRALEQELAALEA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 478 DLQLAEEQYQRLMLKVEDMQK------------------SVLTRDSTVHDLRQQLASLQSQLQKVQLERTTLTNKLKASE 539
Cdd:COG4942 84 ELAELEKEIAELRAELEAQKEelaellralyrlgrqpplALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 540 TEITSLQNVRQWYQQQLVLAQEARVRLQSEMANiqagqmtQAGVLEHLKLENVALSQQLTETQhrsiKEKERIAAQLQNI 619
Cdd:COG4942 164 ALRAELEAERAELEALLAELEEERAALEALKAE-------RQKLLARLEKELAELAAELAELQ----QEAEELEALIARL 232
|
250
....*....|
gi 2024459673 620 EADMLDQEAA 629
Cdd:COG4942 233 EAEAAAAAER 242
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
837-955 |
6.16e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 40.97 E-value: 6.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 837 DQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQ-KEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQf 915
Cdd:PRK00409 519 NELIASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQeEEDKLLEEAEKEAQQAIKEAKKEADEIIKELRQLQ- 597
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 2024459673 916 dKEQMASLAEANQTLKL-QVEQMQEEAKKAITEQKQKMKRL 955
Cdd:PRK00409 598 -KGGYASVKAHELIEARkRLNKANEKKEKKKKKQKEKQEEL 637
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
755-1051 |
6.76e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.66 E-value: 6.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 755 ALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDAS 834
Cdd:COG4372 32 QLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 835 SKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQKEVTEVHQQMVEIENHLQsvQKERDEMETRLQSLQ 914
Cdd:COG4372 112 ELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQ--ALSEAEAEQALDELL 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 915 FDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEmkaKHKAYENAVSILSRRLQESLTAKESA 994
Cdd:COG4372 190 KEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLD---ALELEEDKEELLEEVILKEIEELELA 266
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2024459673 995 EAELSKLKAQITDGGSNQIAQERIQALETELQAVRSSKLMLEKELQEVISLTSQELE 1051
Cdd:COG4372 267 ILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLE 323
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
640-918 |
6.99e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.66 E-value: 6.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 640 VEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQEHLDLMKQFTMTQEMLHTKEQTLDDLQT 719
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 720 QYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQDQLDEGTKRLGEDTEVTSEILEQLRQEMAIRSSQVE 799
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDEL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 800 NLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLETEHSKLQ 879
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAIL 268
|
250 260 270
....*....|....*....|....*....|....*....
gi 2024459673 880 KEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKE 918
Cdd:COG4372 269 VEKDTEEEELEIAALELEALEEAALELKLLALLLNLAAL 307
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
798-981 |
7.08e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.92 E-value: 7.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 798 VENLQQENGSLKKQ-VQKVKEQFLQQKVMVEayrRDASSKDQlisELKATKKRLDSEMKELKRELlqiqvekQSLETEHS 876
Cdd:PRK12704 44 LEEAKKEAEAIKKEaLLEAKEEIHKLRNEFE---KELRERRN---ELQKLEKRLLQKEENLDRKL-------ELLEKREE 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 877 KLQKEVTEVHQQMVEIENHLQSVQKERDEMETRLQSL-QFDKEqmaslaEANQTLklqVEQMQEEAKkaitEQKQKMKRl 955
Cdd:PRK12704 111 ELEKKEKELEQKQQELEKKEEELEELIEEQLQELERIsGLTAE------EAKEIL---LEKVEEEAR----HEAAVLIK- 176
|
170 180
....*....|....*....|....*.
gi 2024459673 956 gsdltsaQKEMKAKHKAYENAVSILS 981
Cdd:PRK12704 177 -------EIEEEAKEEADKKAKEILA 195
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1197-1345 |
7.65e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.52 E-value: 7.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1197 LHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQKEREIGT 1276
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024459673 1277 LKQQLDMSEQRSHKELEGMQVVLQNIKTELEVVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQLK 1345
Cdd:COG4942 95 LRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELA 163
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
423-959 |
7.81e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 41.04 E-value: 7.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 423 LQAQVEHSQSSQQKQESLSSEVATLKQSCWDLERAMADLQNTLEAKNASLASSNNDLQLAEEQYQRLMlKVEDMQKSvlt 502
Cdd:PRK01156 178 LRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELS-SLEDMKNR--- 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 503 rdstvhdLRQQLASLQSQLQKVQLErttlTNKLKASETEITSLQNVRQW-----------YQQQLVLAQEARVRLQSEMA 571
Cdd:PRK01156 254 -------YESEIKTAESDLSMELEK----NNYYKELEERHMKIINDPVYknrnyindyfkYKNDIENKKQILSNIDAEIN 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 572 NIQAGqMTQAGVLEhlklenvALSQQLTETQhrsiKEKERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEF 651
Cdd:PRK01156 323 KYHAI-IKKLSVLQ-------KDYNDYIKKK----SRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMS 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 652 EDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQEhLDLMKQFTM----TQEML-----------HTKEQTLDD 716
Cdd:PRK01156 391 AFISEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQR-IRALRENLDelsrNMEMLngqsvcpvcgtTLGEEKSNH 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 717 LQTQYDELKARLEE----FQSDATSKDD-------MIQYLQNEKI-----------VLEVALQTAKASQDQL-DEGTKRL 773
Cdd:PRK01156 470 IINHYNEKKSRLEEkireIEIEVKDIDEkivdlkkRKEYLESEEInksineynkieSARADLEDIKIKINELkDKHDKYE 549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 774 GEDTEVTSEILEQLRQE-------MAIRSS-QVENLQQENGSLKKQVQKVKEQFlqQKVMVEaYRRDASSKDQLISELKA 845
Cdd:PRK01156 550 EIKNRYKSLKLEDLDSKrtswlnaLAVISLiDIETNRSRSNEIKKQLNDLESRL--QEIEIG-FPDDKSYIDKSIREIEN 626
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 846 TKKRLDSEMKELkrELLQIQVEKQSLETEHSKLQ-KEVTEVHQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLA 924
Cdd:PRK01156 627 EANNLNNKYNEI--QENKILIEKLRGKIDNYKKQiAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTI 704
|
570 580 590
....*....|....*....|....*....|....*
gi 2024459673 925 EANQTLKLQVEQMQEEAKKAItEQKQKMKRLGSDL 959
Cdd:PRK01156 705 EILRTRINELSDRINDINETL-ESMKKIKKAIGDL 738
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1146-1287 |
7.83e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.27 E-value: 7.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1146 QLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEV 1225
Cdd:COG4372 24 ILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEEL 103
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024459673 1226 SQFQQELAEARSQLQLLQKKLDDKLSEQPLVSQEVEDLKWEVEQKEREIGTLKQQLDMSEQR 1287
Cdd:COG4372 104 ESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEE 165
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
984-1248 |
8.15e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.77 E-value: 8.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 984 LQESLTAK-ESAEAELSKLKAQItdggsnQIAQERIQALETELQAVRSSKLMLEkeLQEVISLTSQELEEYREKVLELED 1062
Cdd:COG3206 162 LEQNLELRrEEARKALEFLEEQL------PELRKELEEAEAALEEFRQKNGLVD--LSEEAKLLLQQLSELESQLAEARA 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1063 ELQESRGfrrkikRLEEINKKLALELEhergKLTGLSQSnaalrehnnvleTALAKREADLVQLNLQVQAVLKRKEEEDQ 1142
Cdd:COG3206 234 ELAEAEA------RLAALRAQLGSGPD----ALPELLQS------------PVIQQLRAQLAELEAELAELSARYTPNHP 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1143 QMQQLIQALQASLEKEKSKVKDLKEQVAAAkadaahnrrhYRAAALELNEVKKELhakellvQALQAEVDKLQvedeKHS 1222
Cdd:COG3206 292 DVIALRAQIAALRAQLQQEAQRILASLEAE----------LEALQAREASLQAQL-------AQLEARLAELP----ELE 350
|
250 260
....*....|....*....|....*.
gi 2024459673 1223 QEVSQFQQELAEARSQLQLLQKKLDD 1248
Cdd:COG3206 351 AELRRLEREVEVARELYESLLQRLEE 376
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
982-1085 |
8.80e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 40.61 E-value: 8.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 982 RRLQESLtakESAEAELSKLKAQITDggsnqiAQERIQALETELQAVRSSKLMLEKELQEVISLTSqELEEYREkvlELE 1061
Cdd:COG2433 416 RRLEEQV---ERLEAEVEELEAELEE------KDERIERLERELSEARSEERREIRKDREISRLDR-EIERLER---ELE 482
|
90 100
....*....|....*....|....
gi 2024459673 1062 DELQESRGFRRKIKRLEEINKKLA 1085
Cdd:COG2433 483 EERERIEELKRKLERLKELWKLEH 506
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
852-954 |
9.14e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 40.45 E-value: 9.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 852 SEMKELKRELLQIQVEKQSLETEHSKLQKEvtevhqQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEA--NQT 929
Cdd:COG0542 411 EELDELERRLEQLEIEKEALKKEQDEASFE------RLAELRDELAELEEELEALKARWEAEKELIEEIQELKEEleQRY 484
|
90 100
....*....|....*....|....*
gi 2024459673 930 LKLQVEQMQEEAKKAITEQKQKMKR 954
Cdd:COG0542 485 GKIPELEKELAELEEELAELAPLLR 509
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1131-1358 |
9.50e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.13 E-value: 9.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1131 QAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAE 1210
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024459673 1211 VDKLQVEDEKHSQEVSQF-----------QQELAEARSQLQLLQKKLDDKLSEQplvsQEVEDLKWEVEQKEREIGTLKQ 1279
Cdd:COG4942 99 LEAQKEELAELLRALYRLgrqpplalllsPEDFLDAVRRLQYLKYLAPARREQA----EELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024459673 1280 QLDMSEQRSHKELEGMQVVLQNIKTELEVVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQLKMDLKHGKMKKRKG 1358
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKG 253
|
|
| |
