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Conserved domains on  [gi|2201690266|ref|XP_046799736|]
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DBF4-type zinc finger-containing protein 2 isoform X2 [Gallus gallus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
zf-DBF super family cl47977
DBF zinc finger; This domain is predicted to bind metal ions and is often found associated ...
 162-186 5.91e-07

DBF zinc finger; This domain is predicted to bind metal ions and is often found associated with pfam00533 and pfam02178. It was first identified in the Drosophila chiffon gene product, and is associated with initiation of DNA replication.


The actual alignment was detected with superfamily member pfam07535:

Pssm-ID: 462197  Cd Length: 42  Bit Score: 47.11  E-value: 5.91e-07
                           10        20
                   ....*....|....*....|....*
gi 2201690266  162 GYCNCCHVHYSNLEQHIFSSQHRHF 186
Cdd:pfam07535    1 GYCENCRVKYEDLEEHIVSEKHRKF 25
 
Name Accession Description Interval E-value
zf-DBF pfam07535
DBF zinc finger; This domain is predicted to bind metal ions and is often found associated ...
 162-186 5.91e-07

DBF zinc finger; This domain is predicted to bind metal ions and is often found associated with pfam00533 and pfam02178. It was first identified in the Drosophila chiffon gene product, and is associated with initiation of DNA replication.


Pssm-ID: 462197  Cd Length: 42  Bit Score: 47.11  E-value: 5.91e-07
                           10        20
                   ....*....|....*....|....*
gi 2201690266  162 GYCNCCHVHYSNLEQHIFSSQHRHF 186
Cdd:pfam07535    1 GYCENCRVKYEDLEEHIVSEKHRKF 25
ZnF_DBF smart00586
Zinc finger in DBF-like proteins;
162-186 2.78e-05

Zinc finger in DBF-like proteins;


Pssm-ID: 128854 [Multi-domain]  Cd Length: 49  Bit Score: 42.47  E-value: 2.78e-05
                            10        20
                    ....*....|....*....|....*
gi 2201690266   162 GYCNCCHVHYSNLEQHIFSSQHRHF 186
Cdd:smart00586    6 GYCENCREKYDDLETHLLSEKHRRF 30
DBF4 COG5067
Protein kinase essential for the initiation of DNA replication [DNA replication, recombination, ...
 160-201 4.08e-03

Protein kinase essential for the initiation of DNA replication [DNA replication, recombination, and repair / Cell division and chromosome partitioning];


Pssm-ID: 227399 [Multi-domain]  Cd Length: 468  Bit Score: 41.09  E-value: 4.08e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 2201690266  160 RQGYCNCCHVHYSNLEQHIFSSQHRHFTTYCRNRMGTSSLME 201
Cdd:COG5067    421 KKGYCENCREKYESLEQHIVSEKHRRFAENDLNFEALDSLFE 462
 
Name Accession Description Interval E-value
zf-DBF pfam07535
DBF zinc finger; This domain is predicted to bind metal ions and is often found associated ...
 162-186 5.91e-07

DBF zinc finger; This domain is predicted to bind metal ions and is often found associated with pfam00533 and pfam02178. It was first identified in the Drosophila chiffon gene product, and is associated with initiation of DNA replication.


Pssm-ID: 462197  Cd Length: 42  Bit Score: 47.11  E-value: 5.91e-07
                           10        20
                   ....*....|....*....|....*
gi 2201690266  162 GYCNCCHVHYSNLEQHIFSSQHRHF 186
Cdd:pfam07535    1 GYCENCRVKYEDLEEHIVSEKHRKF 25
ZnF_DBF smart00586
Zinc finger in DBF-like proteins;
162-186 2.78e-05

Zinc finger in DBF-like proteins;


Pssm-ID: 128854 [Multi-domain]  Cd Length: 49  Bit Score: 42.47  E-value: 2.78e-05
                            10        20
                    ....*....|....*....|....*
gi 2201690266   162 GYCNCCHVHYSNLEQHIFSSQHRHF 186
Cdd:smart00586    6 GYCENCREKYDDLETHLLSEKHRRF 30
DBF4 COG5067
Protein kinase essential for the initiation of DNA replication [DNA replication, recombination, ...
 160-201 4.08e-03

Protein kinase essential for the initiation of DNA replication [DNA replication, recombination, and repair / Cell division and chromosome partitioning];


Pssm-ID: 227399 [Multi-domain]  Cd Length: 468  Bit Score: 41.09  E-value: 4.08e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 2201690266  160 RQGYCNCCHVHYSNLEQHIFSSQHRHFTTYCRNRMGTSSLME 201
Cdd:COG5067    421 KKGYCENCREKYESLEQHIVSEKHRRFAENDLNFEALDSLFE 462
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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