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Conserved domains on  [gi|2217298563|ref|XP_047287743|]
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iron-sulfur cluster transfer protein NUBPL isoform X7 [Homo sapiens]

Protein Classification

Mrp/NBP35 family ATP-binding protein( domain architecture ID 10566257)

Mrp (multiple resistance and pH adaptation)/NBP35 (nucleotide-binding protein 35) family ATP-binding protein is an iron-sulfur (FeS) cluster protein that functions as a scaffold to assemble nascent FeS clusters for transfer to FeS-requiring enzymes

CATH:  3.40.50.300
Gene Ontology:  GO:0046872|GO:0005524|GO:0051536|GO:0140663|GO:0016226|GO:0016887
PubMed:  8921898

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ParA pfam10609
NUBPL iron-transfer P-loop NTPase; This family contains ATPases involved in plasmid ...
 1-170 6.32e-103

NUBPL iron-transfer P-loop NTPase; This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.


:

Pssm-ID: 431392 [Multi-domain]  Cd Length: 246  Bit Score: 295.52  E-value: 6.32e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563   1 MSMGFLVE-ESEPVVWRGLMVMSAIEKLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPITGAVIVSTPQDIALMDAHK 79
Cdd:pfam10609  76 MSIGFLLPdEDDAVIWRGPMKSGAIKQFLTDVDWGELDYLIIDLPPGTGDEQLTLAQLLPLTGAVIVTTPQDVALLDVRK 155

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563  80 GAEMFRRVHVPVLGLVQNMSVFQCPKCKHKTHIFGADGARKLAQTLGLEVLGDIPLHLNIREASDTGQPIVFSQPESDEA 159
Cdd:pfam10609 156 AIDMFKKVNVPVLGVVENMSYFVCPHCGEETYIFGKGGGEKLAEELGVPFLGEIPLDPDIREAGDEGKPFVLADPDSPAA 235

                         170
                  ....*....|.
gi 2217298563 160 KAYLRIAVEVV 170
Cdd:pfam10609 236 KAFLKIADKVA 246
 
Name Accession Description Interval E-value
ParA pfam10609
NUBPL iron-transfer P-loop NTPase; This family contains ATPases involved in plasmid ...
 1-170 6.32e-103

NUBPL iron-transfer P-loop NTPase; This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.


Pssm-ID: 431392 [Multi-domain]  Cd Length: 246  Bit Score: 295.52  E-value: 6.32e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563   1 MSMGFLVE-ESEPVVWRGLMVMSAIEKLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPITGAVIVSTPQDIALMDAHK 79
Cdd:pfam10609  76 MSIGFLLPdEDDAVIWRGPMKSGAIKQFLTDVDWGELDYLIIDLPPGTGDEQLTLAQLLPLTGAVIVTTPQDVALLDVRK 155

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563  80 GAEMFRRVHVPVLGLVQNMSVFQCPKCKHKTHIFGADGARKLAQTLGLEVLGDIPLHLNIREASDTGQPIVFSQPESDEA 159
Cdd:pfam10609 156 AIDMFKKVNVPVLGVVENMSYFVCPHCGEETYIFGKGGGEKLAEELGVPFLGEIPLDPDIREAGDEGKPFVLADPDSPAA 235

                         170
                  ....*....|.
gi 2217298563 160 KAYLRIAVEVV 170
Cdd:pfam10609 236 KAFLKIADKVA 246
Mrp_NBP35 cd02037
Mrp/NBP35 ATP-binding protein family; Mrp/NBP35 ATP-binding family protein are typically ...
 1-141 1.33e-78

Mrp/NBP35 ATP-binding protein family; Mrp/NBP35 ATP-binding family protein are typically iron-sulfur (FeS) cluster scaffolds that function to assemble nascent FeS clusters for transfer to FeS-requiring enzymes. Members include the eukaryotic nucleotide-binding protein 1 (NUBP1) which is a component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery and the archael [NiFe] hydrogenase maturation protein HypB which is required for nickel insertion into [NiFe] hydrogenase.


Pssm-ID: 349757 [Multi-domain]  Cd Length: 213  Bit Score: 232.78  E-value: 1.33e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563   1 MSMGFLVEESEPVVWRGLMVMSAIEKLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPITGAVIVSTPQDIALMDAHKG 80
Cdd:cd02037    73 MSIGFLLPEDDAVIWRGPMKSGAIKQFLKDVDWGELDYLIIDLPPGTGDEHLSLVQLIPIDGAVVVTTPQEVSLIDVRKA 152

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217298563  81 AEMFRRVHVPVLGLVQNMSVFQCPKCKHKTHIFGADGARKLAQTLGLEVLGDIPLHLNIRE 141
Cdd:cd02037   153 IDMCKKLNIPVLGIVENMSGFVCPHCGKKIYIFGKGGGEKLAEELGVPFLGKIPLDPELAK 213
PRK11670 PRK11670
iron-sulfur cluster carrier protein ApbC;
2-173 2.64e-77

iron-sulfur cluster carrier protein ApbC;


Pssm-ID: 183270 [Multi-domain]  Cd Length: 369  Bit Score: 234.94  E-value: 2.64e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563   2 SMGFLVEESEPVVWRGLMVMSAIEKLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPITGAVIVSTPQDIALMDAHKGA 81
Cdd:PRK11670  182 SIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGI 261

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563  82 EMFRRVHVPVLGLVQNMSVFQCPKCKHKTHIFGADGARKLAQTLGLEVLGDIPLHLNIREASDTGQPIVFSQPESDEAKA 161
Cdd:PRK11670  262 VMFEKVEVPVLGIVENMSMHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDRGTPTVVSRPESEFTAI 341

                         170
                  ....*....|..
gi 2217298563 162 YLRIAVEVVRRL 173
Cdd:PRK11670  342 YRQLADRVAAQL 353
MrpORP NF041136
iron-sulfur cluster carrier protein MrpORP;
1-176 9.61e-71

iron-sulfur cluster carrier protein MrpORP;


Pssm-ID: 469059 [Multi-domain]  Cd Length: 365  Bit Score: 218.15  E-value: 9.61e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563   1 MSMGFLVE-ESEPVVWRGLMVMSAIEKLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPITGAVIVSTPQDIALMDAHK 79
Cdd:NF041136   79 MSIGFLLEnRDDAVIWRGPVKMGVIKQFLSDVEWGDLDYLIIDSPPGTGDEPLSVAQLIPDAGAVIVTTPQELALADVRK 158

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563  80 GAEMFRRVHVPVLGLVQNMSVFQCPKCKHKTHIFGADGARKLAQTLGLEVLGDIPLHLNIREASDTGQPIVFSQPESDEA 159
Cdd:NF041136  159 SINFCRKLNIPILGIVENMSGFVCPHCGKEIDIFKSGGGEKLAEEMGVPFLGRIPIDPEIVEAGDAGRPFVLDYAWSPAA 238

                         170
                  ....*....|....*..
gi 2217298563 160 KAYLRIAVEVVRRLPSP 176
Cdd:NF041136  239 KALEKIVDPILELLENK 255
Mrp COG0489
Fe-S cluster carrier ATPase, Mrp/ApbC/NBP35 family [Cell cycle control, cell division, ...
 1-114 5.58e-25

Fe-S cluster carrier ATPase, Mrp/ApbC/NBP35 family [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440255 [Multi-domain]  Cd Length: 289  Bit Score: 97.56  E-value: 5.58e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563   1 MSMGFLVEESEpvvwrGLMVMSAIEKLLRQVDwGQLDYLVVDMPPGTGDVQLSVSQNIpITGAVIVSTPQDIALMDAHKG 80
Cdd:COG0489   173 LPAGPLPPNPS-----ELLASKRLKQLLEELR-GRYDYVIIDTPPGLGVADATLLASL-VDGVLLVVRPGKTALDDVRKA 245

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2217298563  81 AEMFRRVHVPVLGLVQNMSvfqcpkCKHKTHIFG 114
Cdd:COG0489   246 LEMLEKAGVPVLGVVLNMV------CPKGERYYG 273
 
Name Accession Description Interval E-value
ParA pfam10609
NUBPL iron-transfer P-loop NTPase; This family contains ATPases involved in plasmid ...
 1-170 6.32e-103

NUBPL iron-transfer P-loop NTPase; This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.


Pssm-ID: 431392 [Multi-domain]  Cd Length: 246  Bit Score: 295.52  E-value: 6.32e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563   1 MSMGFLVE-ESEPVVWRGLMVMSAIEKLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPITGAVIVSTPQDIALMDAHK 79
Cdd:pfam10609  76 MSIGFLLPdEDDAVIWRGPMKSGAIKQFLTDVDWGELDYLIIDLPPGTGDEQLTLAQLLPLTGAVIVTTPQDVALLDVRK 155

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563  80 GAEMFRRVHVPVLGLVQNMSVFQCPKCKHKTHIFGADGARKLAQTLGLEVLGDIPLHLNIREASDTGQPIVFSQPESDEA 159
Cdd:pfam10609 156 AIDMFKKVNVPVLGVVENMSYFVCPHCGEETYIFGKGGGEKLAEELGVPFLGEIPLDPDIREAGDEGKPFVLADPDSPAA 235

                         170
                  ....*....|.
gi 2217298563 160 KAYLRIAVEVV 170
Cdd:pfam10609 236 KAFLKIADKVA 246
Mrp_NBP35 cd02037
Mrp/NBP35 ATP-binding protein family; Mrp/NBP35 ATP-binding family protein are typically ...
 1-141 1.33e-78

Mrp/NBP35 ATP-binding protein family; Mrp/NBP35 ATP-binding family protein are typically iron-sulfur (FeS) cluster scaffolds that function to assemble nascent FeS clusters for transfer to FeS-requiring enzymes. Members include the eukaryotic nucleotide-binding protein 1 (NUBP1) which is a component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery and the archael [NiFe] hydrogenase maturation protein HypB which is required for nickel insertion into [NiFe] hydrogenase.


Pssm-ID: 349757 [Multi-domain]  Cd Length: 213  Bit Score: 232.78  E-value: 1.33e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563   1 MSMGFLVEESEPVVWRGLMVMSAIEKLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPITGAVIVSTPQDIALMDAHKG 80
Cdd:cd02037    73 MSIGFLLPEDDAVIWRGPMKSGAIKQFLKDVDWGELDYLIIDLPPGTGDEHLSLVQLIPIDGAVVVTTPQEVSLIDVRKA 152

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217298563  81 AEMFRRVHVPVLGLVQNMSVFQCPKCKHKTHIFGADGARKLAQTLGLEVLGDIPLHLNIRE 141
Cdd:cd02037   153 IDMCKKLNIPVLGIVENMSGFVCPHCGKKIYIFGKGGGEKLAEELGVPFLGKIPLDPELAK 213
PRK11670 PRK11670
iron-sulfur cluster carrier protein ApbC;
2-173 2.64e-77

iron-sulfur cluster carrier protein ApbC;


Pssm-ID: 183270 [Multi-domain]  Cd Length: 369  Bit Score: 234.94  E-value: 2.64e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563   2 SMGFLVEESEPVVWRGLMVMSAIEKLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPITGAVIVSTPQDIALMDAHKGA 81
Cdd:PRK11670  182 SIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGI 261

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563  82 EMFRRVHVPVLGLVQNMSVFQCPKCKHKTHIFGADGARKLAQTLGLEVLGDIPLHLNIREASDTGQPIVFSQPESDEAKA 161
Cdd:PRK11670  262 VMFEKVEVPVLGIVENMSMHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDRGTPTVVSRPESEFTAI 341

                         170
                  ....*....|..
gi 2217298563 162 YLRIAVEVVRRL 173
Cdd:PRK11670  342 YRQLADRVAAQL 353
MrpORP NF041136
iron-sulfur cluster carrier protein MrpORP;
1-176 9.61e-71

iron-sulfur cluster carrier protein MrpORP;


Pssm-ID: 469059 [Multi-domain]  Cd Length: 365  Bit Score: 218.15  E-value: 9.61e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563   1 MSMGFLVE-ESEPVVWRGLMVMSAIEKLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPITGAVIVSTPQDIALMDAHK 79
Cdd:NF041136   79 MSIGFLLEnRDDAVIWRGPVKMGVIKQFLSDVEWGDLDYLIIDSPPGTGDEPLSVAQLIPDAGAVIVTTPQELALADVRK 158

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563  80 GAEMFRRVHVPVLGLVQNMSVFQCPKCKHKTHIFGADGARKLAQTLGLEVLGDIPLHLNIREASDTGQPIVFSQPESDEA 159
Cdd:NF041136  159 SINFCRKLNIPILGIVENMSGFVCPHCGKEIDIFKSGGGEKLAEEMGVPFLGRIPIDPEIVEAGDAGRPFVLDYAWSPAA 238

                         170
                  ....*....|....*..
gi 2217298563 160 KAYLRIAVEVVRRLPSP 176
Cdd:NF041136  239 KALEKIVDPILELLENK 255
Mrp COG0489
Fe-S cluster carrier ATPase, Mrp/ApbC/NBP35 family [Cell cycle control, cell division, ...
 1-114 5.58e-25

Fe-S cluster carrier ATPase, Mrp/ApbC/NBP35 family [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440255 [Multi-domain]  Cd Length: 289  Bit Score: 97.56  E-value: 5.58e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563   1 MSMGFLVEESEpvvwrGLMVMSAIEKLLRQVDwGQLDYLVVDMPPGTGDVQLSVSQNIpITGAVIVSTPQDIALMDAHKG 80
Cdd:COG0489   173 LPAGPLPPNPS-----ELLASKRLKQLLEELR-GRYDYVIIDTPPGLGVADATLLASL-VDGVLLVVRPGKTALDDVRKA 245

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2217298563  81 AEMFRRVHVPVLGLVQNMSvfqcpkCKHKTHIFG 114
Cdd:COG0489   246 LEMLEKAGVPVLGVVLNMV------CPKGERYYG 273
FlhG COG0455
MinD-like ATPase FlhG/YlxH, activator of the FlhF-type GTPase [Cell cycle control, cell ...
 9-176 4.90e-13

MinD-like ATPase FlhG/YlxH, activator of the FlhF-type GTPase [Cell cycle control, cell division, chromosome partitioning, Cell motility];


Pssm-ID: 440223 [Multi-domain]  Cd Length: 230  Bit Score: 64.53  E-value: 4.90e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563   9 ESEPVVWRGLMVMSAIEKLLRQVDwGQLDYLVVDMPPGTGDV---QLSVSQNIpitgaVIVSTPQDIALMDAHKGAEMFR 85
Cdd:COG0455    68 GSGPAELAELDPEERLIRVLEELE-RFYDVVLVDTGAGISDSvllFLAAADEV-----VVVTTPEPTSITDAYALLKLLR 141

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563  86 RVH-VPVLGLVQNMSvfqcpkckhKTHIFGADGARKLAQTLG------LEVLGDIPLHLNIREASDTGQPIVFSQPESDE 158
Cdd:COG0455   142 RRLgVRRAGVVVNRV---------RSEAEARDVFERLEQVAErflgvrLRVLGVIPEDPAVREAVRRGRPLVLAAPDSPA 212

                         170
                  ....*....|....*...
gi 2217298563 159 AKAYLRIAVEVVRRLPSP 176
Cdd:COG0455   213 ARAIRELAARLAGWPVPE 230
ParA COG1192
ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein ...
 22-173 2.22e-07

ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ [Cell cycle control, cell division, chromosome partitioning, Cell motility];


Pssm-ID: 440805 [Multi-domain]  Cd Length: 253  Bit Score: 49.09  E-value: 2.22e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563  22 SAIEKLLRQVDwGQLDYLVVDMPPGtgdvqLSVSQNIPITGA---VIVSTPQDIALMDAHKGAEMFRRV------HVPVL 92
Cdd:COG1192   105 LRLKRALAPLA-DDYDYILIDCPPS-----LGLLTLNALAAAdsvLIPVQPEYLSLEGLAQLLETIEEVredlnpKLEIL 178

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563  93 GLVQNMsvFQCPKCKHKthifgaDGARKLAQTLGLEVLG-DIPLHLNIREASDTGQPIVFSQPESDEAKAYLRIAVEVVR 171
Cdd:COG1192   179 GILLTM--VDPRTRLSR------EVLEELREEFGDKVLDtVIPRSVALAEAPSAGKPVFEYDPKSKGAKAYRALAEELLE 250


                  ..
gi 2217298563 172 RL 173
Cdd:COG1192   251 RL 252
CbiA pfam01656
CobQ/CobB/MinD/ParA nucleotide binding domain; This family consists of various cobyrinic acid ...
 3-149 1.44e-06

CobQ/CobB/MinD/ParA nucleotide binding domain; This family consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from S.typhimurium, and CobQ from R. capsulatus. These amidases catalyze amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria. The family also contains dethiobiotin synthetases as well as the plasmid partitioning proteins of the MinD/ParA family.


Pssm-ID: 426369 [Multi-domain]  Cd Length: 228  Bit Score: 46.57  E-value: 1.44e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563   3 MGFLVEESEPVVWRGLMVMSAIEKLLRQVDwGQLDYLVVDMPPGTGDvqLSVSQNIPITGAVIVSTPQDIALMDAHKGAE 82
Cdd:pfam01656  86 PGNIDLEKFEKELLGPRKEERLREALEALK-EDYDYVIIDGAPGLGE--LLRNALIAADYVIIPLEPEVILVEDAKRLGG 162

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217298563  83 MFRRV-------HVPVLGLVQNMSVfqcpkcKHKTHIFGADGARKLAQtlGLEVLGDIPLHLNIREASDTGQPI 149
Cdd:pfam01656 163 VIAALvggyallGLKIIGVVLNKVD------GDNHGKLLKEALEELLR--GLPVLGVIPRDEAVAEAPARGLPV 228
MinD cd02036
septum site-determining protein MinD; Septum site-determining protein MinD is part of the ...
 21-173 1.87e-06

septum site-determining protein MinD; Septum site-determining protein MinD is part of the operon MinCDE that determines the site of the formation of a septum at mid-cell, an important part of bacterial cell division. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein.


Pssm-ID: 349756 [Multi-domain]  Cd Length: 236  Bit Score: 46.43  E-value: 1.87e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563  21 MSAIEKLLRQVDwGQLDYLVVDMPPGTGdvQLSVSQNIPITGAVIVSTPQDIALMDAHKgaemfrrvhvpVLGLVQNMSV 100
Cdd:cd02036    97 PEKLEELVKELK-DSFDFILIDSPAGIE--SGFINAIAPADEAIIVTNPEISSVRDADR-----------VIGLLESKGI 162

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563 101 fqcpkcKHKTHI---FGADGARK--------LAQTLGLEVLGDIPLHLNIREASDTGQPIVFSQPESDEAKAYLRIAvev 169
Cdd:cd02036   163 ------VNIGLIvnrYRPEMVKSgdmlsvedIQEILGIPLLGVIPEDPEVIVATNRGEPLVLYKPNSLAAKAFENIA--- 233


                  ....
gi 2217298563 170 vRRL 173
Cdd:cd02036   234 -RRL 236
FlhG-like cd02038
MinD-like ATPase FlhG; FlhG is a member of the SIMIBI superfamily. FlhG (also known as YlxH) ...
 35-157 8.89e-06

MinD-like ATPase FlhG; FlhG is a member of the SIMIBI superfamily. FlhG (also known as YlxH) is a major determinant for a variety of flagellation patterns. It effects location and number of bacterial flagella during C-ring assembly.


Pssm-ID: 349758 [Multi-domain]  Cd Length: 230  Bit Score: 44.48  E-value: 8.89e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217298563  35 QLDYLVVDMPPGTGDVQLSVSqnIPITGAVIVSTPQDIALMDAH---KgaEMFRRVHVPVLGLVQNMSvfqcpkckhKTH 111
Cdd:cd02038   110 NYDYLLIDTGAGISRNVLDFL--LAADEVIVVTTPEPTSITDAYaliK--VLSRRGGKKNFRLIVNMA---------RSP 176

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2217298563 112 IFGADGARKLAQTLG------LEVLGDIPLHLNIREASDTGQPIVFSQPESD 157
Cdd:cd02038   177 KEGRATFERLKKVAKrfldinLDFVGFIPYDQSVRRAVRSQKPFVLLFPNSK 228
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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