|
Name |
Accession |
Description |
Interval |
E-value |
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1026-1093 |
4.50e-21 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 88.25 E-value: 4.50e-21
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217264347 1026 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYRSSFYALEEKHVGFSL 1093
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1270-1337 |
4.50e-21 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 88.25 E-value: 4.50e-21
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217264347 1270 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYRSSFYALEEKHVGFSL 1337
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
951-1018 |
1.78e-18 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 80.93 E-value: 1.78e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217264347 951 YQEVEEDQDPSCPRLSRELLAEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYRSAVYSLEEQYLGLAL 1018
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1195-1262 |
1.78e-18 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 80.93 E-value: 1.78e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217264347 1195 YQEVEEDQDPSCPRLSRELLAEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYRSAVYSLEEQYLGLAL 1262
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
876-942 |
3.35e-18 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 80.16 E-value: 3.35e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217264347 876 DQVKKEDQEATGPRLSRELLAEKEPEVLQDSLDRCYSTPSVYLGLTDSCQPYRSAFYVLEQQRVGLA 942
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1370-1431 |
4.45e-18 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 79.77 E-value: 4.45e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217264347 1370 DQNPPCPRLNSVLMEVEEPEVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHITFAL 1431
Cdd:pfam06758 7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1126-1186 |
7.42e-16 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 73.23 E-value: 7.42e-16
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217264347 1126 DQNPPCPRLSRELLAEKEPEVLQDSLDRWYSTPSVYLGLTDPCQPYRSAFYVLEQQRVGLA 1186
Cdd:pfam06758 7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
719-782 |
1.01e-13 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 67.45 E-value: 1.01e-13
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217264347 719 EVAEKVQKSSSP---REMQKAEEKEVPEDSLEECAITCSNSHGPYDSNQPHRKTKITFEEDKVDSTL 782
Cdd:pfam06758 2 EEEEEDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
459-511 |
1.93e-10 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 57.82 E-value: 1.93e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 2217264347 459 PREMQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDKVNSSL 511
Cdd:pfam06758 16 SRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
181-239 |
1.97e-09 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 55.12 E-value: 1.97e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217264347 181 KVLESSAP---REVQKAEESKVPEDSLEECAITCSNSHGPCDSIQPHKNIKITFEEDKVNST 239
Cdd:pfam06758 6 EDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
813-867 |
4.79e-06 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
:
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 45.49 E-value: 4.79e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 2217264347 813 PVSPRNLQESEEEEVPQESWDEGYSTLSIPPERLASYQSYSSTFHSLEEQQVCMA 867
Cdd:pfam06758 13 PRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| PTZ00121 super family |
cl31754 |
MAEBL; Provisional |
29-469 |
8.47e-05 |
|
MAEBL; Provisional
The actual alignment was detected with superfamily member PTZ00121:
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 8.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 29 AENKQQFRNLKE-RCFLTQLAGFLANRQKKYKYEECKDLIKFmlrneRQFKEEKLAEQLKQAEELRQYKVLVHSQE--RE 105
Cdd:PTZ00121 1242 AKKAEEERNNEEiRKFEEARMAHFARRQAAIKAEEARKADEL-----KKAEEKKKADEAKKAEEKKKADEAKKKAEeaKK 1316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 106 LTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQL------AEGCRLAQQLVQKLSPENDEDEDEDVQVEED 179
Cdd:PTZ00121 1317 ADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAeaaeekAEAAEKKKEEAKKKADAAKKKAEEKKKADEA 1396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 180 EKVLESSAPR--EVQKAEESKVPEDSLEECAitcsnshgpcDSIQPHKNIKITFEEDKVNStvvvDRKSSHDECQDALNI 257
Cdd:PTZ00121 1397 KKKAEEDKKKadELKKAAAAKKKADEAKKKA----------EEKKKADEAKKKAEEAKKAD----EAKKKAEEAKKAEEA 1462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 258 LPVPGPTSSATNVSmvvsagplssEKAEMNilEINEKLRPQLAEKKQQFRSLKEKCFVTQLAGFLAKQQNKYKYEECKDL 337
Cdd:PTZ00121 1463 KKKAEEAKKADEAK----------KKAEEA--KKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKA 1530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 338 IKSMLRNELQFKEE-------KLAEQLKQAEELRQYKVLVHSQERELTQLReKLREGRDASRSLNEHLQALLTPDEPDKS 410
Cdd:PTZ00121 1531 EEAKKADEAKKAEEkkkadelKKAEELKKAEEKKKAEEAKKAEEDKNMALR-KAEEAKKAEEARIEEVMKLYEEEKKMKA 1609
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217264347 411 QGQDLQEQL---AEGCRLAQHLVQKLSPENDEDEDEDVQVEEDEKVLESSSPR---EMQKAEESK 469
Cdd:PTZ00121 1610 EEAKKAEEAkikAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKaaeEAKKAEEDK 1674
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1026-1093 |
4.50e-21 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 88.25 E-value: 4.50e-21
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217264347 1026 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYRSSFYALEEKHVGFSL 1093
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1270-1337 |
4.50e-21 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 88.25 E-value: 4.50e-21
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217264347 1270 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYRSSFYALEEKHVGFSL 1337
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
951-1018 |
1.78e-18 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 80.93 E-value: 1.78e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217264347 951 YQEVEEDQDPSCPRLSRELLAEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYRSAVYSLEEQYLGLAL 1018
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1195-1262 |
1.78e-18 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 80.93 E-value: 1.78e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217264347 1195 YQEVEEDQDPSCPRLSRELLAEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYRSAVYSLEEQYLGLAL 1262
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
876-942 |
3.35e-18 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 80.16 E-value: 3.35e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217264347 876 DQVKKEDQEATGPRLSRELLAEKEPEVLQDSLDRCYSTPSVYLGLTDSCQPYRSAFYVLEQQRVGLA 942
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1370-1431 |
4.45e-18 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 79.77 E-value: 4.45e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217264347 1370 DQNPPCPRLNSVLMEVEEPEVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHITFAL 1431
Cdd:pfam06758 7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1126-1186 |
7.42e-16 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 73.23 E-value: 7.42e-16
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217264347 1126 DQNPPCPRLSRELLAEKEPEVLQDSLDRWYSTPSVYLGLTDPCQPYRSAFYVLEQQRVGLA 1186
Cdd:pfam06758 7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
719-782 |
1.01e-13 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 67.45 E-value: 1.01e-13
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217264347 719 EVAEKVQKSSSP---REMQKAEEKEVPEDSLEECAITCSNSHGPYDSNQPHRKTKITFEEDKVDSTL 782
Cdd:pfam06758 2 EEEEEDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
459-511 |
1.93e-10 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 57.82 E-value: 1.93e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 2217264347 459 PREMQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDKVNSSL 511
Cdd:pfam06758 16 SRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
181-239 |
1.97e-09 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 55.12 E-value: 1.97e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217264347 181 KVLESSAP---REVQKAEESKVPEDSLEECAITCSNSHGPCDSIQPHKNIKITFEEDKVNST 239
Cdd:pfam06758 6 EDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
813-867 |
4.79e-06 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 45.49 E-value: 4.79e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 2217264347 813 PVSPRNLQESEEEEVPQESWDEGYSTLSIPPERLASYQSYSSTFHSLEEQQVCMA 867
Cdd:pfam06758 13 PRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
29-469 |
8.47e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 8.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 29 AENKQQFRNLKE-RCFLTQLAGFLANRQKKYKYEECKDLIKFmlrneRQFKEEKLAEQLKQAEELRQYKVLVHSQE--RE 105
Cdd:PTZ00121 1242 AKKAEEERNNEEiRKFEEARMAHFARRQAAIKAEEARKADEL-----KKAEEKKKADEAKKAEEKKKADEAKKKAEeaKK 1316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 106 LTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQL------AEGCRLAQQLVQKLSPENDEDEDEDVQVEED 179
Cdd:PTZ00121 1317 ADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAeaaeekAEAAEKKKEEAKKKADAAKKKAEEKKKADEA 1396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 180 EKVLESSAPR--EVQKAEESKVPEDSLEECAitcsnshgpcDSIQPHKNIKITFEEDKVNStvvvDRKSSHDECQDALNI 257
Cdd:PTZ00121 1397 KKKAEEDKKKadELKKAAAAKKKADEAKKKA----------EEKKKADEAKKKAEEAKKAD----EAKKKAEEAKKAEEA 1462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 258 LPVPGPTSSATNVSmvvsagplssEKAEMNilEINEKLRPQLAEKKQQFRSLKEKCFVTQLAGFLAKQQNKYKYEECKDL 337
Cdd:PTZ00121 1463 KKKAEEAKKADEAK----------KKAEEA--KKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKA 1530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 338 IKSMLRNELQFKEE-------KLAEQLKQAEELRQYKVLVHSQERELTQLReKLREGRDASRSLNEHLQALLTPDEPDKS 410
Cdd:PTZ00121 1531 EEAKKADEAKKAEEkkkadelKKAEELKKAEEKKKAEEAKKAEEDKNMALR-KAEEAKKAEEARIEEVMKLYEEEKKMKA 1609
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217264347 411 QGQDLQEQL---AEGCRLAQHLVQKLSPENDEDEDEDVQVEEDEKVLESSSPR---EMQKAEESK 469
Cdd:PTZ00121 1610 EEAKKAEEAkikAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKaaeEAKKAEEDK 1674
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
282-692 |
1.62e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 43.12 E-value: 1.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 282 EKAEMNIleinEKLRPQLAEKKQQFRSLKEKcfvtqlagflAKQQNKYKY--EECKDLIKSMLRNELQFKEEKLAEQLKQ 359
Cdd:TIGR02168 182 ERTRENL----DRLEDILNELERQLKSLERQ----------AEKAERYKElkAELRELELALLVLRLEELREELEELQEE 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 360 AEELRQykvLVHSQERELTQLREKLREGRDASRSLNEHLQALltpdepdksQG--QDLQEQLAEGCRLAQHLVQKLSpen 437
Cdd:TIGR02168 248 LKEAEE---ELEELTAELQELEEKLEELRLEVSELEEEIEEL---------QKelYALANEISRLEQQKQILRERLA--- 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 438 dedededvQVEEDEKVLESSSPREMQKAEESKVPEDSLEEcaitcsnshgpcDSNQPHKNIKITFEEDKVNSSLVVDRES 517
Cdd:TIGR02168 313 --------NLERQLEELEAQLEELESKLDELAEELAELEE------------KLEELKEELESLEAELEELEAELEELES 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 518 SHDECQDALNILpvpgptSSAtnvsmvvSAGPLSSEKAEMNILEINEKLRPQLAEKKQQFRslkekcfvtqvacflakqq 597
Cdd:TIGR02168 373 RLEELEEQLETL------RSK-------VAQLELQIASLNNEIERLEARLERLEDRRERLQ------------------- 420
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 598 nkykyEECKDLLKSMLRNELQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLNEHLQALLTPDE 677
Cdd:TIGR02168 421 -----QEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLE 495
|
410
....*....|....*
gi 2217264347 678 PDKSQGQDLQEQLAE 692
Cdd:TIGR02168 496 RLQENLEGFSEGVKA 510
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
52-704 |
2.95e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 42.35 E-value: 2.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 52 ANRQKKYKyEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQykvLVHSQERELTQLREKLREGRDASRSLNEHLQALL 131
Cdd:TIGR02168 212 AERYKELK-AELRELELALLVLRLEELREELEELQEELKEAEE---ELEELTAELQELEEKLEELRLEVSELEEEIEELQ 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 132 TPDEPDKSQGQDLQEQLAEGCRLAQQLVQKLSPENDEDEDEDVQVEEDEKVLESSAPREVQKAEESKVPEDSLEECAITC 211
Cdd:TIGR02168 288 KELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAEL 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 212 SNSHGPCDSIQPH------KNIKITFEEDKVNSTVVVDRKSSHDeCQDALNILP--VPGPTSSATNVSMVVSAGPLSSEK 283
Cdd:TIGR02168 368 EELESRLEELEEQletlrsKVAQLELQIASLNNEIERLEARLER-LEDRRERLQqeIEELLKKLEEAELKELQAELEELE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 284 AEMNIL-EINEKLRPQLAEKKQQFRSLKEKcfVTQLAGFLAKQQNKykyeecKDLIKSMLRNELQFKEEkLAEQLKQAEE 362
Cdd:TIGR02168 447 EELEELqEELERLEEALEELREELEEAEQA--LDAAERELAQLQAR------LDSLERLQENLEGFSEG-VKALLKNQSG 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 363 LRQYKVLVhsqeRELTQLREKLREGRDAsrSLNEHLQALLTPDEPDKSQGQDLQEQLAEGcrLAQHLVQKLSPENDEDED 442
Cdd:TIGR02168 518 LSGILGVL----SELISVDEGYEAAIEA--ALGGRLQAVVVENLNAAKKAIAFLKQNELG--RVTFLPLDSIKGTEIQGN 589
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 443 EDVQVEEDEKVLESSSPREMQKAEESKVPEDSLEECAITCSNSHGPCDSNQ--PHKNI------------KITFEEDKVN 508
Cdd:TIGR02168 590 DREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKlrPGYRIvtldgdlvrpggVITGGSAKTN 669
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 509 SSlVVDRESSHDECQDALNILpvpgpTSSATNVSMVVSAgplsSEKAEMNILEINEKLRPQLAEKKQQFRSLKEKCFVTQ 588
Cdd:TIGR02168 670 SS-ILERRREIEELEEKIEEL-----EEKIAELEKALAE----LRKELEELEEELEQLRKELEELSRQISALRKDLARLE 739
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 589 VACFLAKQQNKYKYEECKDLLKSmlRNELQFKEEKLAEQLKQAEELRQY-KVLVHSQERELTQLREKLREGRDASRSLNE 667
Cdd:TIGR02168 740 AEVEQLEERIAQLSKELTELEAE--IEELEERLEEAEEELAEAEAEIEElEAQIEQLKEELKALREALDELRAELTLLNE 817
|
650 660 670
....*....|....*....|....*....|....*..
gi 2217264347 668 HLQALltpdepdKSQGQDLQEQLAEGCRLAQHLVQKL 704
Cdd:TIGR02168 818 EAANL-------RERLESLERRIAATERRLEDLEEQI 847
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1026-1093 |
4.50e-21 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 88.25 E-value: 4.50e-21
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217264347 1026 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYRSSFYALEEKHVGFSL 1093
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1270-1337 |
4.50e-21 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 88.25 E-value: 4.50e-21
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217264347 1270 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYRSSFYALEEKHVGFSL 1337
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
951-1018 |
1.78e-18 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 80.93 E-value: 1.78e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217264347 951 YQEVEEDQDPSCPRLSRELLAEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYRSAVYSLEEQYLGLAL 1018
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1195-1262 |
1.78e-18 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 80.93 E-value: 1.78e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217264347 1195 YQEVEEDQDPSCPRLSRELLAEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYRSAVYSLEEQYLGLAL 1262
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
876-942 |
3.35e-18 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 80.16 E-value: 3.35e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217264347 876 DQVKKEDQEATGPRLSRELLAEKEPEVLQDSLDRCYSTPSVYLGLTDSCQPYRSAFYVLEQQRVGLA 942
Cdd:pfam06758 1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1370-1431 |
4.45e-18 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 79.77 E-value: 4.45e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217264347 1370 DQNPPCPRLNSVLMEVEEPEVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHITFAL 1431
Cdd:pfam06758 7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
1126-1186 |
7.42e-16 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 73.23 E-value: 7.42e-16
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217264347 1126 DQNPPCPRLSRELLAEKEPEVLQDSLDRWYSTPSVYLGLTDPCQPYRSAFYVLEQQRVGLA 1186
Cdd:pfam06758 7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
719-782 |
1.01e-13 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 67.45 E-value: 1.01e-13
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217264347 719 EVAEKVQKSSSP---REMQKAEEKEVPEDSLEECAITCSNSHGPYDSNQPHRKTKITFEEDKVDSTL 782
Cdd:pfam06758 2 EEEEEDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
459-511 |
1.93e-10 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 57.82 E-value: 1.93e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 2217264347 459 PREMQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDKVNSSL 511
Cdd:pfam06758 16 SRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
181-239 |
1.97e-09 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 55.12 E-value: 1.97e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217264347 181 KVLESSAP---REVQKAEESKVPEDSLEECAITCSNSHGPCDSIQPHKNIKITFEEDKVNST 239
Cdd:pfam06758 6 EDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| Olduvai |
pfam06758 |
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ... |
813-867 |
4.79e-06 |
|
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.
Pssm-ID: 429104 [Multi-domain] Cd Length: 68 Bit Score: 45.49 E-value: 4.79e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 2217264347 813 PVSPRNLQESEEEEVPQESWDEGYSTLSIPPERLASYQSYSSTFHSLEEQQVCMA 867
Cdd:pfam06758 13 PRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
29-469 |
8.47e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 8.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 29 AENKQQFRNLKE-RCFLTQLAGFLANRQKKYKYEECKDLIKFmlrneRQFKEEKLAEQLKQAEELRQYKVLVHSQE--RE 105
Cdd:PTZ00121 1242 AKKAEEERNNEEiRKFEEARMAHFARRQAAIKAEEARKADEL-----KKAEEKKKADEAKKAEEKKKADEAKKKAEeaKK 1316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 106 LTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQL------AEGCRLAQQLVQKLSPENDEDEDEDVQVEED 179
Cdd:PTZ00121 1317 ADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAeaaeekAEAAEKKKEEAKKKADAAKKKAEEKKKADEA 1396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 180 EKVLESSAPR--EVQKAEESKVPEDSLEECAitcsnshgpcDSIQPHKNIKITFEEDKVNStvvvDRKSSHDECQDALNI 257
Cdd:PTZ00121 1397 KKKAEEDKKKadELKKAAAAKKKADEAKKKA----------EEKKKADEAKKKAEEAKKAD----EAKKKAEEAKKAEEA 1462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 258 LPVPGPTSSATNVSmvvsagplssEKAEMNilEINEKLRPQLAEKKQQFRSLKEKCFVTQLAGFLAKQQNKYKYEECKDL 337
Cdd:PTZ00121 1463 KKKAEEAKKADEAK----------KKAEEA--KKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKA 1530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 338 IKSMLRNELQFKEE-------KLAEQLKQAEELRQYKVLVHSQERELTQLReKLREGRDASRSLNEHLQALLTPDEPDKS 410
Cdd:PTZ00121 1531 EEAKKADEAKKAEEkkkadelKKAEELKKAEEKKKAEEAKKAEEDKNMALR-KAEEAKKAEEARIEEVMKLYEEEKKMKA 1609
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217264347 411 QGQDLQEQL---AEGCRLAQHLVQKLSPENDEDEDEDVQVEEDEKVLESSSPR---EMQKAEESK 469
Cdd:PTZ00121 1610 EEAKKAEEAkikAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKaaeEAKKAEEDK 1674
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
52-738 |
3.55e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.52 E-value: 3.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 52 ANRQKKYKYEECKDLIKFMLRNERQFKEEK-------LAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDA--SRS 122
Cdd:PTZ00121 1092 ATEEAFGKAEEAKKTETGKAEEARKAEEAKkkaedarKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAeeARK 1171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 123 LNEHLQALLTPDEPDKSQGQDLQEqlAEGCRLAQQLVQKLSPENDEDEDEDVQVEEDEKVLESSAPRevQKAEESKVPED 202
Cdd:PTZ00121 1172 AEDAKKAEAARKAEEVRKAEELRK--AEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAK--KDAEEAKKAEE 1247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 203 SLEECAITCSNSHGPCDSIQPHKNIKITfEEDKVNSTVVVDRKSSHDECQdalnilpvpgptsSATNVSMVVSAGPLSSE 282
Cdd:PTZ00121 1248 ERNNEEIRKFEEARMAHFARRQAAIKAE-EARKADELKKAEEKKKADEAK-------------KAEEKKKADEAKKKAEE 1313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 283 KAEMnileinEKLRPQLAEKKQQFRSLKEKCFVTQLAGFLAKQQNKYKYEECKDLIKSMLRNELQFKEE--------KLA 354
Cdd:PTZ00121 1314 AKKA------DEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAkkkadaakKKA 1387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 355 EQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKls 434
Cdd:PTZ00121 1388 EEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKK-- 1465
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 435 pendeDEDEDVQVEEDEKVLESSSPREM-QKAEESKVPEDSLEECAitcsnshgpcDSNQPHKNIKITFEEDKVNSSLVV 513
Cdd:PTZ00121 1466 -----AEEAKKADEAKKKAEEAKKADEAkKKAEEAKKKADEAKKAA----------EAKKKADEAKKAEEAKKADEAKKA 1530
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 514 DRESSHDECQDAlnilpvpgptssatnvsmvvsagplsSEKAEMNILEINEKLRPQLAEKK-QQFRSLKEKCFVTQVACF 592
Cdd:PTZ00121 1531 EEAKKADEAKKA--------------------------EEKKKADELKKAEELKKAEEKKKaEEAKKAEEDKNMALRKAE 1584
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 593 LAKQQNKYKYEECKDLL---KSMLRNELQFKEEKL--AEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLNE 667
Cdd:PTZ00121 1585 EAKKAEEARIEEVMKLYeeeKKMKAEEAKKAEEAKikAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAA 1664
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217264347 668 HLQallTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKlspENDNDDDEDVQVEVAEKVQKSsspREMQKAEE 738
Cdd:PTZ00121 1665 EEA---KKAEEDKKKAEEAKKAEEDEKKAAEALKKE---AEEAKKAEELKKKEAEEKKKA---EELKKAEE 1726
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
75-734 |
7.25e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.36 E-value: 7.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 75 RQFKEEKLAEQLKQAEELRQYKVLVHSQEREltQLREKLREGRDASRSLNEHLQALLTPDEPDKSQgqdlQEQLAEGCRL 154
Cdd:PTZ00121 1218 RKAEDAKKAEAVKKAEEAKKDAEEAKKAEEE--RNNEEIRKFEEARMAHFARRQAAIKAEEARKAD----ELKKAEEKKK 1291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 155 AQQLvqKLSPENDEDEDEDVQVEEDEKVLESSaprevQKAEESKVPEDSLEECAITCSNShgpcDSIQPHKNIKITFEED 234
Cdd:PTZ00121 1292 ADEA--KKAEEKKKADEAKKKAEEAKKADEAK-----KKAEEAKKKADAAKKKAEEAKKA----AEAAKAEAEAAADEAE 1360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 235 KVNSTVVVDRKSSHDECQDAlnilpvpgptSSATNVSMVVSAGPLSSEKAEMNILEINEkLRPQLAEKKQQFRSLKEKCF 314
Cdd:PTZ00121 1361 AAEEKAEAAEKKKEEAKKKA----------DAAKKKAEEKKKADEAKKKAEEDKKKADE-LKKAAAAKKKADEAKKKAEE 1429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 315 VTQLAGFLAKQQNKYKYEECKDLIKSMLRNElqfKEEKLAEQLKQAEELRQYKvlvhSQERELTQLREKLREGRDASRSL 394
Cdd:PTZ00121 1430 KKKADEAKKKAEEAKKADEAKKKAEEAKKAE---EAKKKAEEAKKADEAKKKA----EEAKKADEAKKKAEEAKKKADEA 1502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 395 NEHLQALLTPDEPDKSQGQDLQEQL--AEGCRLAQHLvqklspendedededVQVEEDEKVLESSSPREMQKAEESKVPE 472
Cdd:PTZ00121 1503 KKAAEAKKKADEAKKAEEAKKADEAkkAEEAKKADEA---------------KKAEEKKKADELKKAEELKKAEEKKKAE 1567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 473 DSLEECAitcsnshgpcDSNQPHKNIKIT--FEEDKVNSSLVVDRESSHDECQDAlnilpvpgptssATNVSMVVSAGPL 550
Cdd:PTZ00121 1568 EAKKAEE----------DKNMALRKAEEAkkAEEARIEEVMKLYEEEKKMKAEEA------------KKAEEAKIKAEEL 1625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 551 SSEKAEMNILEINEKLRPQLAEKKQQFRSLKEKCFVTQVACFLAKQQNKYKYEECKDLLKSMLRNELQFKEEklAEQLKQ 630
Cdd:PTZ00121 1626 KKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKE--AEEAKK 1703
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 631 AEELRQykvlvhsQERELTQLREKLREGRDASRSLNEHLQallTPDEPDKSQGQDLQEQLAEGCRLAQhlVQKLSPENDN 710
Cdd:PTZ00121 1704 AEELKK-------KEAEEKKKAEELKKAEEENKIKAEEAK---KEAEEDKKKAEEAKKDEEEKKKIAH--LKKEEEKKAE 1771
|
650 660
....*....|....*....|....
gi 2217264347 711 DDDEDVQVEVAEKVQKSSSPREMQ 734
Cdd:PTZ00121 1772 EIRKEKEAVIEEELDEEDEKRRME 1795
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
282-692 |
1.62e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 43.12 E-value: 1.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 282 EKAEMNIleinEKLRPQLAEKKQQFRSLKEKcfvtqlagflAKQQNKYKY--EECKDLIKSMLRNELQFKEEKLAEQLKQ 359
Cdd:TIGR02168 182 ERTRENL----DRLEDILNELERQLKSLERQ----------AEKAERYKElkAELRELELALLVLRLEELREELEELQEE 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 360 AEELRQykvLVHSQERELTQLREKLREGRDASRSLNEHLQALltpdepdksQG--QDLQEQLAEGCRLAQHLVQKLSpen 437
Cdd:TIGR02168 248 LKEAEE---ELEELTAELQELEEKLEELRLEVSELEEEIEEL---------QKelYALANEISRLEQQKQILRERLA--- 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 438 dedededvQVEEDEKVLESSSPREMQKAEESKVPEDSLEEcaitcsnshgpcDSNQPHKNIKITFEEDKVNSSLVVDRES 517
Cdd:TIGR02168 313 --------NLERQLEELEAQLEELESKLDELAEELAELEE------------KLEELKEELESLEAELEELEAELEELES 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 518 SHDECQDALNILpvpgptSSAtnvsmvvSAGPLSSEKAEMNILEINEKLRPQLAEKKQQFRslkekcfvtqvacflakqq 597
Cdd:TIGR02168 373 RLEELEEQLETL------RSK-------VAQLELQIASLNNEIERLEARLERLEDRRERLQ------------------- 420
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 598 nkykyEECKDLLKSMLRNELQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLNEHLQALLTPDE 677
Cdd:TIGR02168 421 -----QEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLE 495
|
410
....*....|....*
gi 2217264347 678 PDKSQGQDLQEQLAE 692
Cdd:TIGR02168 496 RLQENLEGFSEGVKA 510
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
52-704 |
2.95e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 42.35 E-value: 2.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 52 ANRQKKYKyEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQykvLVHSQERELTQLREKLREGRDASRSLNEHLQALL 131
Cdd:TIGR02168 212 AERYKELK-AELRELELALLVLRLEELREELEELQEELKEAEE---ELEELTAELQELEEKLEELRLEVSELEEEIEELQ 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 132 TPDEPDKSQGQDLQEQLAEGCRLAQQLVQKLSPENDEDEDEDVQVEEDEKVLESSAPREVQKAEESKVPEDSLEECAITC 211
Cdd:TIGR02168 288 KELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAEL 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 212 SNSHGPCDSIQPH------KNIKITFEEDKVNSTVVVDRKSSHDeCQDALNILP--VPGPTSSATNVSMVVSAGPLSSEK 283
Cdd:TIGR02168 368 EELESRLEELEEQletlrsKVAQLELQIASLNNEIERLEARLER-LEDRRERLQqeIEELLKKLEEAELKELQAELEELE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 284 AEMNIL-EINEKLRPQLAEKKQQFRSLKEKcfVTQLAGFLAKQQNKykyeecKDLIKSMLRNELQFKEEkLAEQLKQAEE 362
Cdd:TIGR02168 447 EELEELqEELERLEEALEELREELEEAEQA--LDAAERELAQLQAR------LDSLERLQENLEGFSEG-VKALLKNQSG 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 363 LRQYKVLVhsqeRELTQLREKLREGRDAsrSLNEHLQALLTPDEPDKSQGQDLQEQLAEGcrLAQHLVQKLSPENDEDED 442
Cdd:TIGR02168 518 LSGILGVL----SELISVDEGYEAAIEA--ALGGRLQAVVVENLNAAKKAIAFLKQNELG--RVTFLPLDSIKGTEIQGN 589
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 443 EDVQVEEDEKVLESSSPREMQKAEESKVPEDSLEECAITCSNSHGPCDSNQ--PHKNI------------KITFEEDKVN 508
Cdd:TIGR02168 590 DREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKlrPGYRIvtldgdlvrpggVITGGSAKTN 669
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 509 SSlVVDRESSHDECQDALNILpvpgpTSSATNVSMVVSAgplsSEKAEMNILEINEKLRPQLAEKKQQFRSLKEKCFVTQ 588
Cdd:TIGR02168 670 SS-ILERRREIEELEEKIEEL-----EEKIAELEKALAE----LRKELEELEEELEQLRKELEELSRQISALRKDLARLE 739
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217264347 589 VACFLAKQQNKYKYEECKDLLKSmlRNELQFKEEKLAEQLKQAEELRQY-KVLVHSQERELTQLREKLREGRDASRSLNE 667
Cdd:TIGR02168 740 AEVEQLEERIAQLSKELTELEAE--IEELEERLEEAEEELAEAEAEIEElEAQIEQLKEELKALREALDELRAELTLLNE 817
|
650 660 670
....*....|....*....|....*....|....*..
gi 2217264347 668 HLQALltpdepdKSQGQDLQEQLAEGCRLAQHLVQKL 704
Cdd:TIGR02168 818 EAANL-------RERLESLERRIAATERRLEDLEEQI 847
|
|
| |
