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Conserved domains on  [gi|2462552217|ref|XP_054170601|]
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protein IL-40 isoform X3 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Ig_C17orf99 pfam17736
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 70-164 4.12e-46

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


:

Pssm-ID: 465476  Cd Length: 95  Bit Score: 151.11  E-value: 4.12e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462552217  70 PVVSIAYKVLEVFPKGRWVLITCCAPQPPPPITYSLCGTKNIKVAKKVVKTHEPASFNLNVTLKSSPDLLTYFCRASSTS 149
Cdd:pfam17736   1 PVSQIAYKVLEVFPSGRRVLISCHASQGSPPITYSLVGSDGIVVAKKIPLHGEPANFSLNITLKSSPDLLTYQCQAANTS 80

                          90
                  ....*....|....*
gi 2462552217 150 GAHVDSARLQMHWEL 164
Cdd:pfam17736  81 GTQVSSLRLQPPWEL 95
Ig_C17orf99 super family cl39263
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 168-257 3.00e-36

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


The actual alignment was detected with superfamily member pfam17736:

Pssm-ID: 465476  Cd Length: 95  Bit Score: 125.69  E-value: 3.00e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462552217 168 PVSELrANFTLQDRGAGPRVEMICQASSGSPPITNSLIGKDGQVHLQQRPCHRQPANFSFLPSQTSD----WFWCQAANN 243
Cdd:pfam17736   1 PVSQI-AYKVLEVFPSGRRVLISCHASQGSPPITYSLVGSDGIVVAKKIPLHGEPANFSLNITLKSSpdllTYQCQAANT 79

                          90
                  ....*....|....
gi 2462552217 244 ANVQHSALTVVPPG 257
Cdd:pfam17736  80 SGTQVSSLRLQPPW 93
 
Name Accession Description Interval E-value
Ig_C17orf99 pfam17736
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 70-164 4.12e-46

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


Pssm-ID: 465476  Cd Length: 95  Bit Score: 151.11  E-value: 4.12e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462552217  70 PVVSIAYKVLEVFPKGRWVLITCCAPQPPPPITYSLCGTKNIKVAKKVVKTHEPASFNLNVTLKSSPDLLTYFCRASSTS 149
Cdd:pfam17736   1 PVSQIAYKVLEVFPSGRRVLISCHASQGSPPITYSLVGSDGIVVAKKIPLHGEPANFSLNITLKSSPDLLTYQCQAANTS 80

                          90
                  ....*....|....*
gi 2462552217 150 GAHVDSARLQMHWEL 164
Cdd:pfam17736  81 GTQVSSLRLQPPWEL 95
Ig_C17orf99 pfam17736
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 168-257 3.00e-36

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


Pssm-ID: 465476  Cd Length: 95  Bit Score: 125.69  E-value: 3.00e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462552217 168 PVSELrANFTLQDRGAGPRVEMICQASSGSPPITNSLIGKDGQVHLQQRPCHRQPANFSFLPSQTSD----WFWCQAANN 243
Cdd:pfam17736   1 PVSQI-AYKVLEVFPSGRRVLISCHASQGSPPITYSLVGSDGIVVAKKIPLHGEPANFSLNITLKSSpdllTYQCQAANT 79

                          90
                  ....*....|....
gi 2462552217 244 ANVQHSALTVVPPG 257
Cdd:pfam17736  80 SGTQVSSLRLQPPW 93
 
Name Accession Description Interval E-value
Ig_C17orf99 pfam17736
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 70-164 4.12e-46

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


Pssm-ID: 465476  Cd Length: 95  Bit Score: 151.11  E-value: 4.12e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462552217  70 PVVSIAYKVLEVFPKGRWVLITCCAPQPPPPITYSLCGTKNIKVAKKVVKTHEPASFNLNVTLKSSPDLLTYFCRASSTS 149
Cdd:pfam17736   1 PVSQIAYKVLEVFPSGRRVLISCHASQGSPPITYSLVGSDGIVVAKKIPLHGEPANFSLNITLKSSPDLLTYQCQAANTS 80

                          90
                  ....*....|....*
gi 2462552217 150 GAHVDSARLQMHWEL 164
Cdd:pfam17736  81 GTQVSSLRLQPPWEL 95
Ig_C17orf99 pfam17736
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 168-257 3.00e-36

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


Pssm-ID: 465476  Cd Length: 95  Bit Score: 125.69  E-value: 3.00e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462552217 168 PVSELrANFTLQDRGAGPRVEMICQASSGSPPITNSLIGKDGQVHLQQRPCHRQPANFSFLPSQTSD----WFWCQAANN 243
Cdd:pfam17736   1 PVSQI-AYKVLEVFPSGRRVLISCHASQGSPPITYSLVGSDGIVVAKKIPLHGEPANFSLNITLKSSpdllTYQCQAANT 79

                          90
                  ....*....|....
gi 2462552217 244 ANVQHSALTVVPPG 257
Cdd:pfam17736  80 SGTQVSSLRLQPPW 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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