|
Name |
Accession |
Description |
Interval |
E-value |
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
24-562 |
1.14e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 81.52 E-value: 1.14e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 24 LKVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEA----------MSRARVKDLEDKLHSVQLTR 93
Cdd:COG1196 232 LKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELeleeaqaeeyELLAELARLEQDIARLEERR 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 94 KKEEETFKRKHEELDRLArekdavlvavkgahvEQLQELQTRVLELQAHCETLEAQLRRAEWRQADTAKEKDAAIDQLRE 173
Cdd:COG1196 312 RELEERLEELEEELAELE---------------EELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAE 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 174 DASTVKSAWDAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERERslERDQVQLGLDWQRRC 253
Cdd:COG1196 377 AEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEE--EEEALEEAAEEEAEL 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 254 DDIERDQIQKSEALIQGLSMAKSQVAAKLQETEQALQEQEVVLKAVTLERDQAVQALRMHGLprPGAQMLLRQHEEEISK 333
Cdd:COG1196 455 EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLL--AGLRGLAGAVAVLIGV 532
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 334 DFPSSEIQRLREQNTSLRNAIAQMRKEMEALSHQIPPPIQTAAESTDANQPDPEAGGDAATPDYVLALEAEIRTLKHKFK 413
Cdd:COG1196 533 EAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREAD 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 414 TLEKHLEDVLDPLKMSSPHAESQPSVRTSTETTGGSAQAGQAGGSVQAGQAGGSVQAGPVSSGLALRKLGDRVQLLN-LL 492
Cdd:COG1196 613 ARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAeEE 692
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 493 VTRLRQKVLREPLEPAALQRELPREVDQVHLEVLELRKQVAELGKHLRIAQHGGAEPSGRKQPPASDAVA 562
Cdd:COG1196 693 LELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDL 762
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
41-368 |
7.07e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 72.78 E-value: 7.07e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 41 AKAAESLQRAEATNAELERKLQSRAGELQDLEAMSRARVKDLEDKLHSVQLTRK--KEEETFKRKHEELDRLAREKDAVL 118
Cdd:TIGR02168 680 EELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKdlARLEAEVEQLEERIAQLSKELTEL 759
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 119 VAVKGAHVEQLQELQTRVLELQAHCETLEAQLRRA--EWRQADTA-KEKDAAIDQLREDASTVKSAWD---AQIAQLSKE 192
Cdd:TIGR02168 760 EAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLkeELKALREAlDELRAELTLLNEEAANLRERLEsleRRIAATERR 839
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 193 MVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERERSLERDQVQLGLDWQRRCDDIE--RDQIQKSEALIQG 270
Cdd:TIGR02168 840 LEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRelESKRSELRRELEE 919
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 271 LSMAKSQVAAKLQETEQALQE-QEVVLKAVTLERDQAVQALRMHGLPRPGAQMLLRQHEEEIS----------------- 332
Cdd:TIGR02168 920 LREKLAQLELRLEGLEVRIDNlQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKelgpvnlaaieeyeelk 999
|
330 340 350
....*....|....*....|....*....|....*...
gi 2462554519 333 --KDFPSSEIQRLREQNTSLRNAIAQMRKEMEALSHQI 368
Cdd:TIGR02168 1000 erYDFLTAQKEDLTEAKETLEEAIEEIDREARERFKDT 1037
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
93-633 |
3.24e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 70.35 E-value: 3.24e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 93 RKKEEETFKRKHEELDRLAREKDavLVAVKGAHVEQLQ---ELQTRVLELQAHCETLEAQLRRAEWRQAdtaKEKDAAID 169
Cdd:COG1196 171 KERKEEAERKLEATEENLERLED--ILGELERQLEPLErqaEKAERYRELKEELKELEAELLLLKLREL---EAELEELE 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 170 QLREDASTVKSAWDAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERERSLERDQVQLGLD- 248
Cdd:COG1196 246 AELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEEl 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 249 --WQRRCDDIE------RDQIQKSEALIQGLSMAKSQVAAKLQETEQALQEQEVVLKAVTLERDQAVQALRMHGLPRPGA 320
Cdd:COG1196 326 aeLEEELEELEeeleelEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEEL 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 321 QMLLRQHEEEISKDfpSSEIQRLREQNTSLRNAIAQMRKEMEALSHQIpppIQTAAESTDANQPDPEAGGDAAtpdyvlA 400
Cdd:COG1196 406 EEAEEALLERLERL--EEELEELEEALAELEEEEEEEEEALEEAAEEE---AELEEEEEALLELLAELLEEAA------L 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 401 LEAEIRTLKHKFKTLEKHLEDVLDPLKMSSPHAESQPSVRTSTETTGGSAQAGQAGGSVQAGQAGGSVQAGPVSSGLALR 480
Cdd:COG1196 475 LEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVE 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 481 KLGDRVQLLNLLVTRLRQKVLREPLEPAALQRELPR--------------EVDQVHLEVLELRKQVAELGKHLRIAQHGG 546
Cdd:COG1196 555 DDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAalargaigaavdlvASDLREADARYYVLGDTLLGRTLVAARLEA 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 547 AEPSGRKQPPASDAVALGREGLTkRGPMEAEDQGELFLHLRSVARAPQTLSMHRLQRKLKEAARKIISLRLEKEQLIEMG 626
Cdd:COG1196 635 ALRRAVTLAGRLREVTLEGEGGS-AGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAE 713
|
....*..
gi 2462554519 627 NRLRAEL 633
Cdd:COG1196 714 EERLEEE 720
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
2-331 |
4.33e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.97 E-value: 4.33e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 2 RKREHEFRLQADNMSNTALSRELKVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAMSRARVKD 81
Cdd:COG1196 273 RLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEE 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 82 LEDKLHSVQLTRKKEEETFKRKHEELDRLAREKDAVLvavkgAHVEQLQELQTRVLELQAHCETLEAQLRRAEwRQADTA 161
Cdd:COG1196 353 LEEAEAELAEAEEALLEAEAELAEAEEELEELAEELL-----EALRAAAELAAQLEELEEAEEALLERLERLE-EELEEL 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 162 KEKDAAIDQLREDASTVKSAWDAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERERSLE-- 239
Cdd:COG1196 427 EEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEgf 506
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 240 -----RDQVQLGLDWQRRCDDIERDQIQKSEALIQGLSMAksQVAAKLQETEQALQEQEVVLKAVTLERDQAVQALRMHG 314
Cdd:COG1196 507 legvkAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAA--ALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRA 584
|
330
....*....|....*..
gi 2462554519 315 LPRPGAQMLLRQHEEEI 331
Cdd:COG1196 585 RAALAAALARGAIGAAV 601
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
45-404 |
6.04e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.58 E-value: 6.04e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 45 ESLQRaEATNAELERKLQSRageLQDLEAMSRArvkdLEDKLHSVQLTRKKEE-ETFKRKHEELDRLAREKDAVLVAVKG 123
Cdd:COG1196 203 EPLER-QAEKAERYRELKEE---LKELEAELLL----LKLRELEAELEELEAElEELEAELEELEAELAELEAELEELRL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 124 AHVE---QLQELQTRVLELQAHCETLEAQLRRAEWRQADTAKEKDAAIDQLREdastvksaWDAQIAQLSKEMVSRDLQI 200
Cdd:COG1196 275 ELEElelELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAE--------LEEELEELEEELEELEEEL 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 201 QTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERERSLERDQVQLGLDWQRRCDDIERD--QIQKSEALIQGLSMAKSQV 278
Cdd:COG1196 347 EEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELeeAEEALLERLERLEEELEEL 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 279 AAKLQETEQALQEQEVVLKAVTLERDQAVQALRMHGLPRPGAQMLLRQHEEEIskdfpsSEIQRLREQNTSLRNAIAQMR 358
Cdd:COG1196 427 EEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAAL------AELLEELAEAAARLLLLLEAE 500
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 2462554519 359 KEMEALSHQIPPPIQTAAESTDANQPDPEAGGDAATPDYVLALEAE 404
Cdd:COG1196 501 ADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAA 546
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
41-328 |
1.53e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.08 E-value: 1.53e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 41 AKAAESLQRAEATNAELERKLQS------RAGELQDLEAMSRA--------RVKDLEDKLHSVQLTRKKEEEtfkrKHEE 106
Cdd:TIGR02168 182 ERTRENLDRLEDILNELERQLKSlerqaeKAERYKELKAELRElelallvlRLEELREELEELQEELKEAEE----ELEE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 107 LDRLAREKDAVLVAVKGAHVE---QLQELQTRVLELQAHCETLEAQLRRAEWRQA--------------------DTAKE 163
Cdd:TIGR02168 258 LTAELQELEEKLEELRLEVSEleeEIEELQKELYALANEISRLEQQKQILRERLAnlerqleeleaqleelesklDELAE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 164 KDAAIDQLREDASTVKSAWDAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERERSLERDQV 243
Cdd:TIGR02168 338 ELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRE 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 244 QLGLDWQRRCDDIERDQIQKSEALIQGLSMAKSQVAAKLQETEQALQEQEVVLKAVTLERDQAVQALRMHGLPRPGAQML 323
Cdd:TIGR02168 418 RLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERL 497
|
....*
gi 2462554519 324 LRQHE 328
Cdd:TIGR02168 498 QENLE 502
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
45-333 |
6.23e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.16 E-value: 6.23e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 45 ESLQRAEATNAELERKLQSRAGELQDLEAMSRARVKDLEDKLHSVQltrkKEEETFKRKHEELDRLAREKDAVLVAVKG- 123
Cdd:TIGR02169 684 EGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLE----QEEEKLKERLEELEEDLSSLEQEIENVKSe 759
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 124 -AHVE-QLQELQTRVLELQAHCETLEAQLRRAEWRQadtakekdaaIDQLREDASTVKSAWDAQIAQLSKEMVSRDLQ-- 199
Cdd:TIGR02169 760 lKELEaRIEELEEDLHKLEEALNDLEARLSHSRIPE----------IQAELSKLEEEVSRIEARLREIEQKLNRLTLEke 829
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 200 -----IQTLQEEEVKLKAQVARSQQDIERYKQQLSlavERERSLERDQVQLgLDWQRRCDDIERDqIQKSEALIQGLSMA 274
Cdd:TIGR02169 830 ylekeIQELQEQRIDLKEQIKSIEKEIENLNGKKE---ELEEELEELEAAL-RDLESRLGDLKKE-RDELEAQLRELERK 904
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2462554519 275 KSQVAAKLQETEQALQEQEVVLKAVtLERDQAVQALRMHGLPRPGAQMLLRQHEEEISK 333
Cdd:TIGR02169 905 IEELEAQIEKKRKRLSELKAKLEAL-EEELSEIEDPKGEDEEIPEEELSLEDVQAELQR 962
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
3-364 |
3.21e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 60.93 E-value: 3.21e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 3 KREHEFRLQADNMSNTALSRELKVKLLHKELEALKEAgAKAAESLQRAEATNAELERKlQSRAGELQDLEAMSRARV--K 80
Cdd:PTZ00121 1308 KKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKA-AEAAKAEAEAAADEAEAAEE-KAEAAEKKKEEAKKKADAakK 1385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 81 DLEDKLHSVQLTRKKEEEtfKRKHEELDRLAREKdavlvavkgahvEQLQELQTRVLELQahcETLEAQLRRAEWRQADT 160
Cdd:PTZ00121 1386 KAEEKKKADEAKKKAEED--KKKADELKKAAAAK------------KKADEAKKKAEEKK---KADEAKKKAEEAKKADE 1448
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 161 AKEKdaaIDQLREDASTVKSAWDAQIAQLSKEMVSRDLQIQTLQE--EEVKLKAQVARSQQDIERYKQQLSLAVERERS- 237
Cdd:PTZ00121 1449 AKKK---AEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKkaEEAKKKADEAKKAAEAKKKADEAKKAEEAKKAd 1525
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 238 -LERDQVQLGLDWQRRCDDIER-DQIQKSEALIQGLSMAKSQVAAKLQETEQALQEQEVVLKAVTLERDQAVQALRMHGL 315
Cdd:PTZ00121 1526 eAKKAEEAKKADEAKKAEEKKKaDELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEK 1605
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2462554519 316 PRPGAQmlLRQHEEEISKDFPSSEIQRLREQNTSLRNAIAQMRKEMEAL 364
Cdd:PTZ00121 1606 KMKAEE--AKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEEL 1652
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
45-420 |
3.31e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 60.84 E-value: 3.31e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 45 ESLQRAEATNAELERklqsrageLQDLeamsrarVKDLEDKLHSVQLTRKKEEEtFKRKHEELDRLARekdAVLVAVKGA 124
Cdd:TIGR02168 176 ETERKLERTRENLDR--------LEDI-------LNELERQLKSLERQAEKAER-YKELKAELRELEL---ALLVLRLEE 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 125 HVEQLQELQTRVLELQAHCETLEAQLRRAEwrqadtakekdaaidqlredastvksawdAQIAQLSKEMVSRDLQIQTLQ 204
Cdd:TIGR02168 237 LREELEELQEELKEAEEELEELTAELQELE-----------------------------EKLEELRLEVSELEEEIEELQ 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 205 EEEVKLKAQVARSQQDIERYKQQLSLAverERSLERDQVQLGLDWQRRcdDIERDQIQKSEALIQGLSMAKSQVAAKLQE 284
Cdd:TIGR02168 288 KELYALANEISRLEQQKQILRERLANL---ERQLEELEAQLEELESKL--DELAEELAELEEKLEELKEELESLEAELEE 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 285 TEQALQEQEVVLKAVTLERDQAvqalrmhglprpgaqmllrqheeeiskdfpSSEIQRLREQNTSLRNAIAQMRKEMEAL 364
Cdd:TIGR02168 363 LEAELEELESRLEELEEQLETL------------------------------RSKVAQLELQIASLNNEIERLEARLERL 412
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2462554519 365 SHQipppIQTAAESTDANQPDPEAGGDAATPDYVLALEAEIRTLKHKFKTLEKHLE 420
Cdd:TIGR02168 413 EDR----RERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALE 464
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
2-417 |
3.23e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 57.64 E-value: 3.23e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 2 RKREHEFRLQADNMSNTALSRELKVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAMSRARVKD 81
Cdd:COG1196 392 LRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEE 471
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 82 LEDKLHSVQLTRKKEEETfKRKHEELDRLAREKDAVLVAVKGAHVEQLQELQTRVLELQAHCETLE---AQLRRAEWRQA 158
Cdd:COG1196 472 AALLEAALAELLEELAEA-AARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYeaaLEAALAAALQN 550
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 159 DTAKEKDAAIDQLREDASTVKSAwdAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVArSQQDIERYKQQLSLAVERERSL 238
Cdd:COG1196 551 IVVEDDEVAAAAIEYLKAAKAGR--ATFLPLDKIRARAALAAALARGAIGAAVDLVA-SDLREADARYYVLGDTLLGRTL 627
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 239 ERDQVQLGLDWQRRCDDIERDQIQKSEALIQGLSMAKSQVAAKLQETEQALQEQEVVLKAVTLERDQAVQALRmhglprp 318
Cdd:COG1196 628 VAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALL------- 700
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 319 gAQMLLRQHEEEiskdfpsseiQRLREQNTSLRNAIAQMRKEMEALshqipppiQTAAESTDANQPDPEAGGDAATPDYV 398
Cdd:COG1196 701 -AEEEEERELAE----------AEEERLEEELEEEALEEQLEAERE--------ELLEELLEEEELLEEEALEELPEPPD 761
|
410 420
....*....|....*....|
gi 2462554519 399 LA-LEAEIRTLKHKFKTLEK 417
Cdd:COG1196 762 LEeLERELERLEREIEALGP 781
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
23-240 |
6.32e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 56.60 E-value: 6.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 23 ELKVKLLHKELEALKEAGAKAAESLQRAEATNAELE---RKLQSRAGELQDLEAMSRARVKDLEDKLHSVQLTRKKEEET 99
Cdd:TIGR02168 725 SRQISALRKDLARLEAEVEQLEERIAQLSKELTELEaeiEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREA 804
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 100 FKRKHEELDRLAREKDAVLVAVKGaHVEQLQELQTRVLELQAHCETLEAQLRRAEWRQADTAKEKDAAIDQLrEDASTVK 179
Cdd:TIGR02168 805 LDELRAELTLLNEEAANLRERLES-LERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESEL-EALLNER 882
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462554519 180 SAWDAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLS-LAVERERSLER 240
Cdd:TIGR02168 883 ASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEgLEVRIDNLQER 944
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
124-363 |
4.29e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.77 E-value: 4.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 124 AHVEQLQELQTRVLELQAHCETLEaQLRrAEWRQADTAKEKDAAIDQLREDAStvksAWDAQ--IAQLSKEMVSRDLQIQ 201
Cdd:COG4913 232 EHFDDLERAHEALEDAREQIELLE-PIR-ELAERYAAARERLAELEYLRAALR----LWFAQrrLELLEAELEELRAELA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 202 TLQEEEVKLKAQVARSQQDIERYKQQL-SLAVERERSLERDQVQLgldwQRRCDDIERDQiQKSEALIQGLSMA----KS 276
Cdd:COG4913 306 RLEAELERLEARLDALREELDELEAQIrGNGGDRLEQLEREIERL----ERELEERERRR-ARLEALLAALGLPlpasAE 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 277 QVAAKLQETEQALQEQEVVLKAVTLERDQAVQALRmhglprpgaqmLLRQHEEEISKdfpssEIQRLREQNTSLRNAIAQ 356
Cdd:COG4913 381 EFAALRAEAAALLEALEEELEALEEALAEAEAALR-----------DLRRELRELEA-----EIASLERRKSNIPARLLA 444
|
....*..
gi 2462554519 357 MRKEMEA 363
Cdd:COG4913 445 LRDALAE 451
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
76-368 |
5.62e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 53.58 E-value: 5.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 76 RARVKDLEDKLHSVQLTRKKEEETFKRKHEE-LDRLAREKDAVLVAVkgahVEQLQELQTRVLELQAHCETLEAQLRRAE 154
Cdd:pfam15921 237 KGRIFPVEDQLEALKSESQNKIELLLQQHQDrIEQLISEHEVEITGL----TEKASSARSQANSIQSQLEIIQEQARNQN 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 155 WRQADTAKEKDAAIDQLREDASTVKSAWDAQIAQLSKEMVSRDLQI-------QTLQEEEVKLKAQVARSQQDIERYKQQ 227
Cdd:pfam15921 313 SMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELtearterDQFSQESGNLDDQLQKLLADLHKREKE 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 228 LSLAVERERSL-ERDQ-VQLGLDWQRRCDDIERDQIQKSEALIQGL--------------------SMAK-SQVAAKLQE 284
Cdd:pfam15921 393 LSLEKEQNKRLwDRDTgNSITIDHLRRELDDRNMEVQRLEALLKAMksecqgqmerqmaaiqgkneSLEKvSSLTAQLES 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 285 TEQALQE--QEVVLKAVTLERDQAVQALRMHGLPRpgAQMLLRQHEEEISK-----DFPSSEIQRLREQNTSLRNAiaqm 357
Cdd:pfam15921 473 TKEMLRKvvEELTAKKMTLESSERTVSDLTASLQE--KERAIEATNAEITKlrsrvDLKLQELQHLKNEGDHLRNV---- 546
|
330
....*....|.
gi 2462554519 358 RKEMEALSHQI 368
Cdd:pfam15921 547 QTECEALKLQM 557
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
58-292 |
7.65e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.00 E-value: 7.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 58 ERKLQSRAGELQ----DLEAMsRARVKDLEDKLHsvQLTRKKEE-ETFKRKHEELDRLAREKDAVLVAvkgAHVEQLQEL 132
Cdd:COG4913 220 EPDTFEAADALVehfdDLERA-HEALEDAREQIE--LLEPIRELaERYAAARERLAELEYLRAALRLW---FAQRRLELL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 133 QTRVLELQAHCETLEAQLRRAEWRQADTAKEKDAAIDQLREDASTVKSAWDAQIAQLSKEMVSRDLQIQTLQEEEVKLKA 212
Cdd:COG4913 294 EAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGL 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 213 QVARSQQDIERYKQQLSLAVERERSLERDQVQLGLDWQRRCDDIERdQIQKSEALIQGLSMAKSQVAAKLQETEQALQEQ 292
Cdd:COG4913 374 PLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRR-ELRELEAEIASLERRKSNIPARLLALRDALAEA 452
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
25-237 |
7.68e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.15 E-value: 7.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 25 KVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEamsrARVKDLEDKLHSVQLTRKKEEETFKRKH 104
Cdd:TIGR02169 309 SIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLT----EEYAELKEELEDLRAELEEVDKEFAETR 384
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 105 EELDRLAREKDAvLVAVKGAHVEQLQELQTRVLELQAHCETLEAQLRRAEWRQADTAKEKDAAIDQLREDastvksawDA 184
Cdd:TIGR02169 385 DELKDYREKLEK-LKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQ--------EW 455
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 2462554519 185 QIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERERS 237
Cdd:TIGR02169 456 KLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRG 508
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
3-377 |
1.04e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 52.84 E-value: 1.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 3 KREHEFRLQADNMSNTALSRELKVKLLHKELEAlkeagAKAAESLQRA-EATNAELERKlqsrAGELQDLEAMSRARVKD 81
Cdd:PTZ00121 1476 KKKAEEAKKADEAKKKAEEAKKKADEAKKAAEA-----KKKADEAKKAeEAKKADEAKK----AEEAKKADEAKKAEEKK 1546
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 82 LEDKLHSVQLTRKKEEetfKRKHEELDRLAREKDAVLvavkgAHVEQLQELQTRVLELQAHCETLEAQLRRAEWRQADTA 161
Cdd:PTZ00121 1547 KADELKKAEELKKAEE---KKKAEEAKKAEEDKNMAL-----RKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEA 1618
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 162 KEKdaaIDQLREDASTVKSAwdAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERERslerd 241
Cdd:PTZ00121 1619 KIK---AEELKKAEEEKKKV--EQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEK----- 1688
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 242 qvqlgldwqrrcddierdqiQKSEALIQglsmaKSQVAAKLQETEQalQEQEVVLKAVTLERDQAVQALRmhglprpgAQ 321
Cdd:PTZ00121 1689 --------------------KAAEALKK-----EAEEAKKAEELKK--KEAEEKKKAEELKKAEEENKIK--------AE 1733
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2462554519 322 MLLRQHEEEISKdfpsSEIQRLREQNtslRNAIAQMRKEMEALSHQIPPPIQTAAE 377
Cdd:PTZ00121 1734 EAKKEAEEDKKK----AEEAKKDEEE---KKKIAHLKKEEEKKAEEIRKEKEAVIE 1782
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
25-223 |
1.27e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 52.22 E-value: 1.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 25 KVKLLHKELEALKEAGAKAAESLQRAEAtnaeLERKLQSRAGELQDLEAMSRAR--VKDLEDKLHSVQltrkkeeetfkr 102
Cdd:COG4913 611 KLAALEAELAELEEELAEAEERLEALEA----ELDALQERREALQRLAEYSWDEidVASAEREIAELE------------ 674
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 103 khEELDRLaREKDAVLVAVKgahvEQLQELQTRVLELQAHCETLEAQLRRAEWRQADTAKEKDAAIDQLREDASTVKSA- 181
Cdd:COG4913 675 --AELERL-DASSDDLAALE----EQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLEl 747
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2462554519 182 ---WDAQIAQLSKEMVSRDLQiQTLQEEEVKLKAQVARSQQDIER 223
Cdd:COG4913 748 ralLEERFAAALGDAVERELR-ENLEERIDALRARLNRAEEELER 791
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
199-536 |
4.78e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 50.44 E-value: 4.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 199 QIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERERSLERDQVQLGLDWQRRCDDIER--DQIQKSEALIQGLSMAKS 276
Cdd:TIGR02168 685 KIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQleERIAQLSKELTELEAEIE 764
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 277 QVAAKLQETEQALQEQEVVLKAVTLERDQAVQALrmhglprpgaQMLLRQHEEEiskdfpSSEIQRLREQNTSLRNAIAQ 356
Cdd:TIGR02168 765 ELEERLEEAEEELAEAEAEIEELEAQIEQLKEEL----------KALREALDEL------RAELTLLNEEAANLRERLES 828
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 357 MRKEMEALSHQIpppiQTAAESTDANQPDpeaggdaatpdyVLALEAEIRTLKHKFKTLEKHLEDVLDPLKMSSPHAESQ 436
Cdd:TIGR02168 829 LERRIAATERRL----EDLEEQIEELSED------------IESLAAEIEELEELIEELESELEALLNERASLEEALALL 892
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 437 PSVRTSTettggSAQAGQAGGSVQAGQAGGSVQAGPVSSgLALRKLGDRVQLLNLLvTRLRQKVLREPLEPAALQRELPR 516
Cdd:TIGR02168 893 RSELEEL-----SEELRELESKRSELRRELEELREKLAQ-LELRLEGLEVRIDNLQ-ERLSEEYSLTLEEAEALENKIED 965
|
330 340
....*....|....*....|
gi 2462554519 517 EVDQVHLEVLELRKQVAELG 536
Cdd:TIGR02168 966 DEEEARRRLKRLENKIKELG 985
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
25-223 |
8.75e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 8.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 25 KVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAMSRARVKDLEDKLHSVQLTRKKEEETFKRKH 104
Cdd:COG4942 49 EEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSP 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 105 EELDRLAReKDAVLVAVKGAHVEQLQELQTRVLELQAHCETLEAQLRRAEWRQADTAKEKdAAIDQLREDASTVksawda 184
Cdd:COG4942 129 EDFLDAVR-RLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEER-AALEALKAERQKL------ 200
|
170 180 190
....*....|....*....|....*....|....*....
gi 2462554519 185 qIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIER 223
Cdd:COG4942 201 -LARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
29-196 |
9.67e-06 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 47.61 E-value: 9.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 29 LHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLeamsRARVKDLEDKLHSVQLTR-----KKEEETFKRK 103
Cdd:COG1579 29 LPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEV----EARIKKYEEQLGNVRNNKeyealQKEIESLKRR 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 104 HEELDRLAREKDavlvavkgahvEQLQELQTRVLELQAHCETLEAQLRRAEwrqadtaKEKDAAIDQLREDASTVKSAWD 183
Cdd:COG1579 105 ISDLEDEILELM-----------ERIEELEEELAELEAELAELEAELEEKK-------AELDEELAELEAELEELEAERE 166
|
170
....*....|...
gi 2462554519 184 AQIAQLSKEMVSR 196
Cdd:COG1579 167 ELAAKIPPELLAL 179
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
12-369 |
9.75e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 49.57 E-value: 9.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 12 ADNMSNTALSRELKVKLLHKElEALKEAGAKAAESLQRAEATNAELErKLQSRAGEL-QDLEAMSrarvkdleDKLHSVQ 90
Cdd:COG3096 271 ADYMRHANERRELSERALELR-RELFGARRQLAEEQYRLVEMARELE-ELSARESDLeQDYQAAS--------DHLNLVQ 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 91 lTRKKEEETFKRKHEELDRLAREKDAVLVAVKGAHvEQLQELQTRVLELQAHCETLEAQL-----------RRA-EWRQA 158
Cdd:COG3096 341 -TALRQQEKIERYQEDLEELTERLEEQEEVVEEAA-EQLAEAEARLEAAEEEVDSLKSQLadyqqaldvqqTRAiQYQQA 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 159 DTAKEKdaAIDQLREDASTVKSAWDAQIAQLSKEmvsrDLQIQTLQEEEVKLK-AQVARSQQDiERYK--QQLSLAVERE 235
Cdd:COG3096 419 VQALEK--ARALCGLPDLTPENAEDYLAAFRAKE----QQATEEVLELEQKLSvADAARRQFE-KAYElvCKIAGEVERS 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 236 RSLERDQvQLGLDWqrrcddieRDQiqksEALIQGLsmakSQVAAKLQETEQALQEQEVVlkavtleRDQAVQALRMHGL 315
Cdd:COG3096 492 QAWQTAR-ELLRRY--------RSQ----QALAQRL----QQLRAQLAELEQRLRQQQNA-------ERLLEEFCQRIGQ 547
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2462554519 316 PRPGAQMLLRQHEE-EISKDFPSSEIQRLREQNTSLRNAIAQMRKEMEALSHQIP 369
Cdd:COG3096 548 QLDAAEELEELLAElEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARAP 602
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
98-325 |
1.02e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.53 E-value: 1.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 98 ETFKRKHEELDRlAREKDAVLvavkgahvEQLQELQTRVLELQAHCETLEAQLRRAE-WRQADTAKEKDAAIDQLREDAS 176
Cdd:COG4913 235 DDLERAHEALED-AREQIELL--------EPIRELAERYAAARERLAELEYLRAALRlWFAQRRLELLEAELEELRAELA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 177 TVksawDAQIAQLSKemvsrdlQIQTLQEEEVKLKAQVARSQ-QDIERYKQQLSLAVERERSLERDQVQLgldwQRRCDD 255
Cdd:COG4913 306 RL----EAELERLEA-------RLDALREELDELEAQIRGNGgDRLEQLEREIERLERELEERERRRARL----EALLAA 370
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462554519 256 IERDQIQKSE---ALIQGLSMAKSQVAAKLQETEQALQEQEVVLKAVTLERDQA---VQALRMHGLPRPGAQMLLR 325
Cdd:COG4913 371 LGLPLPASAEefaALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELeaeIASLERRKSNIPARLLALR 446
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
21-237 |
1.10e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 49.30 E-value: 1.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 21 SRELKVKLLHKELEALKEAGAKA-AESLQRAEATNAELERKLQSRAGELQDLEAMSR----------ARVKDLEDKLHSV 89
Cdd:TIGR02169 269 EIEQLLEELNKKIKDLGEEEQLRvKEKIGELEAEIASLERSIAEKERELEDAEERLAkleaeidkllAEIEELEREIEEE 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 90 QLTRKKEEETFKRKHEELDRLAREkdavLVAVKGAHVEQLQELQTRVLELQAHCETLEaQLRRAEWRQADTAKEKDAAID 169
Cdd:TIGR02169 349 RKRRDKLTEEYAELKEELEDLRAE----LEEVDKEFAETRDELKDYREKLEKLKREIN-ELKRELDRLQEELQRLSEELA 423
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462554519 170 QLREDASTVKsawdAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSlAVERERS 237
Cdd:TIGR02169 424 DLNAAIAGIE----AKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYD-RVEKELS 486
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
29-368 |
1.46e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 48.61 E-value: 1.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 29 LHKELEALKEAGAKAAESLQRAE---------ATNAELERKLQSRAGELQDLEAmSRARVKDLEDKLHSVQLTRKKEEET 99
Cdd:COG4717 100 LEEELEELEAELEELREELEKLEkllqllplyQELEALEAELAELPERLEELEE-RLEELRELEEELEELEAELAELQEE 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 100 FKRKHEELDRLAREKDAVLVAVKGAHVEQLQELQTRVLELQAHCETLEAQLRRAEWRQADTAKEK--------------- 164
Cdd:COG4717 179 LEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEErlkearlllliaaal 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 165 ---DAAIDQLREDASTVKSAWDAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARS---QQDIERYKQQLSLAVERERSL 238
Cdd:COG4717 259 lalLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEeleEEELEELLAALGLPPDLSPEE 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 239 ERDQVQLGLDWQRRCDDIERdqiQKSEALIQGLSMAKSQVAAKLQET--EQALQEQEVVLKAVTLERDQAVQALRMHGLP 316
Cdd:COG4717 339 LLELLDRIEELQELLREAEE---LEEELQLEELEQEIAALLAEAGVEdeEELRAALEQAEEYQELKEELEELEEQLEELL 415
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2462554519 317 RPGAQMLLRQHEEEISKdfpssEIQRLREQNTSLRNAIAQMRKEMEALSHQI 368
Cdd:COG4717 416 GELEELLEALDEEELEE-----ELEELEEELEELEEELEELREELAELEAEL 462
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
16-249 |
2.45e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 2.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 16 SNTALSRELKVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAmsraRVKDLEDKLHSVQLTRKK 95
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQ----ELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 96 EEETFKRKHEELDRLAR------EKDAVLVAVKGAHVEQ----LQELQTRVLELQAHCETLEAQLRRAEWRQADTAKEKd 165
Cdd:COG4942 95 LRAELEAQKEELAELLRalyrlgRQPPLALLLSPEDFLDavrrLQYLKYLAPARREQAEELRADLAELAALRAELEAER- 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 166 AAIDQLREDASTVKSAWDAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERERSLERDQVQL 245
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKG 253
|
....
gi 2462554519 246 GLDW 249
Cdd:COG4942 254 KLPW 257
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
23-308 |
2.79e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.21 E-value: 2.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 23 ELKVKLLHKELEALKEAG-AKAAESLQRAEATNAELERKLQS--RAGELQDLEAMSRARVKDLEDKLHSVQLTRKKEEET 99
Cdd:PTZ00121 1538 EAKKAEEKKKADELKKAEeLKKAEEKKKAEEAKKAEEDKNMAlrKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEE 1617
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 100 FKRKHEELDRLAREKDAVLVAVKGAHVEQLQELQTRVLELQAHCETLE-AQLRRAEWRQADTAK----EKDAAIDQLRED 174
Cdd:PTZ00121 1618 AKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEeAKKAEEDKKKAEEAKkaeeDEKKAAEALKKE 1697
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 175 ASTVKSAWDA---------QIAQLSKEMVSRDLQIQTL--QEEEVKLKAQVARSQQDIERYKQQLSLAVERERSLERDQ- 242
Cdd:PTZ00121 1698 AEEAKKAEELkkkeaeekkKAEELKKAEEENKIKAEEAkkEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEk 1777
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462554519 243 ---VQLGLDWQRRCDDIERDQIQK-----SEALIQGlSMAKSQVAAKLQETEQALQEQEVVLKAVTLERDQAVQ 308
Cdd:PTZ00121 1778 eavIEEELDEEDEKRRMEVDKKIKdifdnFANIIEG-GKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFE 1850
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
76-291 |
2.91e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.99 E-value: 2.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 76 RARVKDLEDKLHSVQLTRKKEEETFKRKHEELDRLAREKDAVlvavkgAHVEQLQELQTRVLELQAHCETLEAQLRRAEw 155
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQERREAL------QRLAEYSWDEIDVASAEREIAELEAELERLD- 681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 156 rqadtakEKDAAIDQLREdastvksawdaQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERE 235
Cdd:COG4913 682 -------ASSDDLAALEE-----------QLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLA 743
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 2462554519 236 RSLERDQvqlgLDWQRRCDDIERDQIQKSEALIQGLSMAKSQVAAKLQETEQALQE 291
Cdd:COG4913 744 RLELRAL----LEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
2-364 |
3.81e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 47.62 E-value: 3.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 2 RKREHEFRLQADNMSNTALSRELKVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAMSRARVKD 81
Cdd:COG1196 441 EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLR 520
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 82 LEDKLHSVQLTRKKEEETF---------KRKHEELDRLAREKDAVLVAVKGAHVEQLQELQTRVLELQAhcETLEAQLRR 152
Cdd:COG1196 521 GLAGAVAVLIGVEAAYEAAleaalaaalQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALA--AALARGAIG 598
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 153 AEWRQADTAKEKDAAIDQLREDASTVKSAWDAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAV 232
Cdd:COG1196 599 AAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAE 678
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 233 ERERSLERDQVQLGLDWQRRcDDIERDQIQKSEALIQGLSMAKSQVAAKLQETEQALQEQEVVLKAVTLERDQAVQALRM 312
Cdd:COG1196 679 AELEELAERLAEEELELEEA-LLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELP 757
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462554519 313 HGLPRPGAQMLLRQHEEEIS-------------------KDFPSSEIQRLREQNTSLRNAIAQMRKEMEAL 364
Cdd:COG1196 758 EPPDLEELERELERLEREIEalgpvnllaieeyeeleerYDFLSEQREDLEEARETLEEAIEEIDRETRER 828
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
25-224 |
5.27e-05 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 46.93 E-value: 5.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 25 KVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQD-LEAMsrarVKDLED------KLHSVQLTRKKEE 97
Cdd:PHA02562 196 QIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDeLLNL----VMDIEDpsaalnKLNTAAAKIKSKI 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 98 ETFKRKHEELdrlarEKDAVLVAVKGA---HVEQLQELQTRVLELQAHCETL-----EAQLRRAEWRQAD-TAKEKDAAI 168
Cdd:PHA02562 272 EQFQKVIKMY-----EKGGVCPTCTQQiseGPDRITKIKDKLKELQHSLEKLdtaidELEEIMDEFNEQSkKLLELKNKI 346
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2462554519 169 DQLREDAST-VKSAWDAQ--IAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERY 224
Cdd:PHA02562 347 STNKQSLITlVDKAKKVKaaIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKYHR 405
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
27-200 |
5.79e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.93 E-value: 5.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 27 KLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLeaMSRARVKDLEDKLHSVQLTRKKEEETFKRKHEE 106
Cdd:COG3206 215 KLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPEL--LQSPVIQQLRAQLAELEAELAELSARYTPNHPD 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 107 LDRLAREKDAVLVAVKGAHVEQLQELQTRVLELQAHCETLEAQLRRAEwRQADTAKEKDAAIDQLREDASTVKSAWDA-- 184
Cdd:COG3206 293 VIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLE-ARLAELPELEAELRRLEREVEVARELYESll 371
|
170
....*....|....*....
gi 2462554519 185 ---QIAQLSKEMVSRDLQI 200
Cdd:COG3206 372 qrlEEARLAEALTVGNVRV 390
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
21-364 |
5.90e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 46.96 E-value: 5.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 21 SRELKVKLLHKELEALKEAGAKAAESLQRAEATNAELERklqsragELQDLeamsRARVKDLEDKLHSVQLTRKKEEETF 100
Cdd:PRK02224 381 DRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELRE-------ERDEL----REREAELEATLRTARERVEEAEALL 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 101 KR-KHEELDRlarekdavlvAVKGA-HVEQLQELQTRVLELQAHCETLEAQLRRAEWR--QADTAKEKDAAIDQLREDAS 176
Cdd:PRK02224 450 EAgKCPECGQ----------PVEGSpHVETIEEDRERVEELEAELEDLEEEVEEVEERleRAEDLVEAEDRIERLEERRE 519
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 177 TVksawDAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERERSLERDQVQLgldwqrrcdDI 256
Cdd:PRK02224 520 DL----EELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAEL---------KE 586
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 257 ERDQIQKSEALIQGLSMAKSQVaAKLQETEQALQEQEVVLKAVTLERDQAVQALR--MHGLPRPGAQMLLRQHEEEISKd 334
Cdd:PRK02224 587 RIESLERIRTLLAAIADAEDEI-ERLREKREALAELNDERRERLAEKRERKRELEaeFDEARIEEAREDKERAEEYLEQ- 664
|
330 340 350
....*....|....*....|....*....|
gi 2462554519 335 fPSSEIQRLREQNTSLRNAIAQMRKEMEAL 364
Cdd:PRK02224 665 -VEEKLDELREERDDLQAEIGAVENELEEL 693
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
12-309 |
6.19e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 46.76 E-value: 6.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 12 ADNMSNTALSRELKVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAMSRARVKDLEDKLHSVQL 91
Cdd:pfam12128 393 AGIKDKLAKIREARDRQLAVAEDDLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLENFDER 472
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 92 TRKKEEETFKRKHEELdRLAREKdAVLVAVKGAHVEQLQELQTRVLELQAHCETLEAQL-------------RRAEWRQA 158
Cdd:pfam12128 473 IERAREEQEAANAEVE-RLQSEL-RQARKRRDQASEALRQASRRLEERQSALDELELQLfpqagtllhflrkEAPDWEQS 550
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 159 -------------DTAKEKDAAI--------------------------DQLREDASTVKSAWDAQ---IAQLSKEMVSR 196
Cdd:pfam12128 551 igkvispellhrtDLDPEVWDGSvggelnlygvkldlkridvpewaaseEELRERLDKAEEALQSArekQAAAEEQLVQA 630
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 197 DLQIQTLQEEEVKLKAQVARSQQDIERY---KQQLSLAVERERSLERDQVQLGL-DWQRRCDDIERDQIQKSEALIQGLS 272
Cdd:pfam12128 631 NGELEKASREETFARTALKNARLDLRRLfdeKQSEKDKKNKALAERKDSANERLnSLEAQLKQLDKKHQAWLEEQKEQKR 710
|
330 340 350
....*....|....*....|....*....|....*..
gi 2462554519 273 MAKSQVAAKLQETEQALQEQEVVLKAVTLERDQAVQA 309
Cdd:pfam12128 711 EARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKA 747
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
22-190 |
6.86e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.83 E-value: 6.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 22 RELKVKLLHKELEALKEAgakaaesLQRAEATNAELERkLQSRAGELqdleamsRARVKDLEDKLHSVQLTRKKEEETFK 101
Cdd:COG4913 659 DEIDVASAEREIAELEAE-------LERLDASSDDLAA-LEEQLEEL-------EAELEELEEELDELKGEIGRLEKELE 723
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 102 RKHEELDRLAREKDAvlvAVKGAHVEQLQELQTRVLELQAhcETLEAQLRRA-EWRQADTAKEKDAAIDQLREDASTVKS 180
Cdd:COG4913 724 QAEEELDELQDRLEA---AEDLARLELRALLEERFAAALG--DAVERELRENlEERIDALRARLNRAEEELERAMRAFNR 798
|
170
....*....|
gi 2462554519 181 AWDAQIAQLS 190
Cdd:COG4913 799 EWPAETADLD 808
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
7-421 |
7.34e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 46.64 E-value: 7.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 7 EFRLQADNmsnTALSRELKVKLLHKELEALKEAGAKaaeSLQRAEATNAELERKLQSRAGELQDLEAM---SRARVKDLE 83
Cdd:pfam05483 201 ELRVQAEN---ARLEMHFKLKEDHEKIQHLEEEYKK---EINDKEKQVSLLLIQITEKENKMKDLTFLleeSRDKANQLE 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 84 DKlhsvqltRKKEEETFKRKHEELDRLAREKDAVLVAVK------GAHVEQLQELQTRVLELQAHCETLEAQLRRAEWRQ 157
Cdd:pfam05483 275 EK-------TKLQDENLKELIEKKDHLTKELEDIKMSLQrsmstqKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAH 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 158 ADTAKEKDAAIDQLREDASTVKSAWDAQIAQLskEMVSRDLQIQTLQEEEV------------KLKAQVARSQQDIERYK 225
Cdd:pfam05483 348 SFVVTEFEATTCSLEELLRTEQQRLEKNEDQL--KIITMELQKKSSELEEMtkfknnkeveleELKKILAEDEKLLDEKK 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 226 QQLSLAVErersLERDQVQLGLDWQRRCDDIERDQIQksealIQGLSMAKSQVAAKLQETEQALQEQEvvLKAVTLERDQ 305
Cdd:pfam05483 426 QFEKIAEE----LKGKEQELIFLLQAREKEIHDLEIQ-----LTAIKTSEEHYLKEVEDLKTELEKEK--LKNIELTAHC 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 306 AVQALRMHGLPRPGAQMLL--RQHEEEISKDFPSSE-----IQRLREQNTSLRNAIAQMRKEMEALSHQIPPPIQTAAES 378
Cdd:pfam05483 495 DKLLLENKELTQEASDMTLelKKHQEDIINCKKQEErmlkqIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEEN 574
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 2462554519 379 TDANQPDpeaggdaatpdyVLALEAEIRTLKHKFKTLEKHLED 421
Cdd:pfam05483 575 ARSIEYE------------VLKKEKQMKILENKCNNLKKQIEN 605
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
49-363 |
7.94e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 46.57 E-value: 7.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 49 RAEATNAEL--ERKLQSRAGELQDLEAMSRARV-KDLEDKLHSVQLTRKKEEETFKRKHEELDRLAREKDAvLVAVKGAH 125
Cdd:PRK02224 168 RERASDARLgvERVLSDQRGSLDQLKAQIEEKEeKDLHERLNGLESELAELDEEIERYEEQREQARETRDE-ADEVLEEH 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 126 VEQLQELqtrvlelqahcETLEAQLRRAEWRQADTAKEKDAAIDQLREdastvksawdaqiaqlskemvsRDLQIQTLQE 205
Cdd:PRK02224 247 EERREEL-----------ETLEAEIEDLRETIAETEREREELAEEVRD----------------------LRERLEELEE 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 206 EEVKLKAQVARSQQDIERYKQQLSLAVERERSLERDQVQLGLDWQRRCDDIE--RDQIQKSEALIQGLSMAKSQVAAKLQ 283
Cdd:PRK02224 294 ERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAEslREDADDLEERAEELREEAAELESELE 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 284 ETEQALQEQEVVLKAVTLERDQAVQALRMHGLPRPGAQMLLRQHEEEisKDFPSSEIQRLREQNTSLRNAIAQMRKEMEA 363
Cdd:PRK02224 374 EAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREE--RDELREREAELEATLRTARERVEEAEALLEA 451
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
148-370 |
1.05e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 1.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 148 AQLRRAEWRQADTAKEKDAAIDQLREDASTVKSAWDAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQ 227
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 228 L--------SLAVERERSLERDQVQLGLDwQRRCDDIERDQI------QKSEALIQGLSMAKSQVAAKLQETEQALQEQE 293
Cdd:COG4942 99 LeaqkeelaELLRALYRLGRQPPLALLLS-PEDFLDAVRRLQylkylaPARREQAEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462554519 294 VVLKAVTLERDQAVQALRMHglprpgaQMLLRQHEEEISKDfpSSEIQRLREQNTSLRNAIAQMRKEMEALSHQIPP 370
Cdd:COG4942 178 ALLAELEEERAALEALKAER-------QKLLARLEKELAEL--AAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
25-368 |
1.07e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.83 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 25 KVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAMSRaRVKDLEDKLhsVQLTRKKEE-ETFKRK 103
Cdd:PRK03918 287 ELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEE-RLEELKKKL--KELEKRLEElEERHEL 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 104 HEELDRLAREKDAVLVAVKGAHVEQ----LQELQTRVLELQAHCETLEAQLRRAEWRqadtAKEKDAAIDQLR------- 172
Cdd:PRK03918 364 YEEAKAKKEELERLKKRLTGLTPEKlekeLEELEKAKEEIEEEISKITARIGELKKE----IKELKKAIEELKkakgkcp 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 173 --------EDASTVKSAWDAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYK-----------------QQ 227
Cdd:PRK03918 440 vcgrelteEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKElaeqlkeleeklkkynlEE 519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 228 LSLAVERERSLERDQVQLGLDWQRRCDDIERDQ--IQKSEALIQGLSMAKSQVA------------------AKLQETEQ 287
Cdd:PRK03918 520 LEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEelKKKLAELEKKLDELEEELAellkeleelgfesveeleERLKELEP 599
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 288 ----------ALQEQEVVLKAVTLERDQAVQALRMHGLPRPGAQMLlRQHEEEISKDFPSSEIQRLREQNTSLRNAIAQM 357
Cdd:PRK03918 600 fyneylelkdAEKELEREEKELKKLEEELDKAFEELAETEKRLEEL-RKELEELEKKYSEEEYEELREEYLELSRELAGL 678
|
410
....*....|.
gi 2462554519 358 RKEMEALSHQI 368
Cdd:PRK03918 679 RAELEELEKRR 689
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
31-420 |
1.27e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 45.88 E-value: 1.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 31 KELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAMSRARVKDLEDKLhsvqltrKKEEETFKRKHEELDRl 110
Cdd:pfam15921 391 KELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQM-------ERQMAAIQGKNESLEK- 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 111 arekdavlVAVKGAHVEQLQELQTRVL-ELQAHCETLEAQLRRAEWRQAdTAKEKDAAIDQLREDASTVKSAWDAQIAQL 189
Cdd:pfam15921 463 --------VSSLTAQLESTKEMLRKVVeELTAKKMTLESSERTVSDLTA-SLQEKERAIEATNAEITKLRSRVDLKLQEL 533
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 190 sKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQL----SLAVERERSLERDQVQLGldwqrrcdDIERdQIQKSE 265
Cdd:pfam15921 534 -QHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIenmtQLVGQHGRTAGAMQVEKA--------QLEK-EINDRR 603
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 266 ALIQGLSMAKSQVAAKLQETEQALQEQEvvlkavtLERDQAVQAlrmhGLPRPGAQMLLRQHEEEISKDFPSS--EIQRL 343
Cdd:pfam15921 604 LELQEFKILKDKKDAKIRELEARVSDLE-------LEKVKLVNA----GSERLRAVKDIKQERDQLLNEVKTSrnELNSL 672
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462554519 344 REQNTSLRNAIAQMRKEMEALSHQIPPPIQTAAESTDA--NQPDPEAGGDAATPDYVLALEAEIRTLKHKFKTLEKHLE 420
Cdd:pfam15921 673 SEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQtrNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQ 751
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
23-423 |
1.48e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 45.50 E-value: 1.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 23 ELKVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQdleamsraRVKDLEDKLHSvQLTRKKEEETFKR 102
Cdd:pfam05557 124 ELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQQSSLAEAEQ--------RIKELEFEIQS-QEQDSEIVKNSKS 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 103 KHEELDRLAREKDAVLvavkgAHVEQLQELQTRVLELQAHCETLEAQLRRAEWRQADTAKEKDAAIDQLREDASTVKSAW 182
Cdd:pfam05557 195 ELARIPELEKELERLR-----EHNKHLNENIENKLLLKEEVEDLKRKLEREEKYREEAATLELEKEKLEQELQSWVKLAQ 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 183 DAQIAQLSKEMVSRdlQIQTLQEEEVKLKAQVA----------RSQQDIERYKQQLSLAVERERSLERDQVQLGLDWQRR 252
Cdd:pfam05557 270 DTGLNLRSPEDLSR--RIEQLQQREIVLKEENSsltssarqleKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRR 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 253 CDDI--ERD---QIQKSEALIQGLSMAKSQVAAKLQETEQALQEQEVVLKAVtleRDQAVQALRMHGLPRPGAQML---- 323
Cdd:pfam05557 348 VLLLtkERDgyrAILESYDKELTMSNYSPQLLERIEEAEDMTQKMQAHNEEM---EAQLSVAEEELGGYKQQAQTLerel 424
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 324 --LRQHEEEISKDFPSSEI--------------QRLREQNTSLrnaiaqmrkEMEALSHQIPPPIQTAAESTDANQPDPE 387
Cdd:pfam05557 425 qaLRQQESLADPSYSKEEVdslrrkletlelerQRLREQKNEL---------EMELERRCLQGDYDPKKTKVLHLSMNPA 495
|
410 420 430
....*....|....*....|....*....|....*.
gi 2462554519 388 AGGDAATPDYVLALEAEIRTLKHKFKTLEKHLEDVL 423
Cdd:pfam05557 496 AEAYQQRKNQLEKLQAEIERLKRLLKKLEDDLEQVL 531
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
22-174 |
1.54e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.68 E-value: 1.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 22 RELKVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAmsrARVKDLEDKLHsvqlTRKKEEETFK 101
Cdd:COG4913 286 AQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGG---DRLEQLEREIE----RLERELEERE 358
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462554519 102 RKHEELDRLAREKDAVLVAVKgahvEQLQELQTRVLELQAHCETLEAQLRRAEWRQADTAKEKDAAIDQLRED 174
Cdd:COG4913 359 RRRARLEALLAALGLPLPASA----EEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAE 427
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
2-378 |
1.72e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.14 E-value: 1.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 2 RKREHEFRLQADNMSNTALSRELKVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAMSRARVKD 81
Cdd:COG4717 117 ELEKLEKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQD 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 82 LEDKLHSVQLTRKKEEETFKRKHEELDRLAREKDAVLV-AVKGAHVEQLQELQT-----------------------RVL 137
Cdd:COG4717 197 LAEELEELQQRLAELEEELEEAQEELEELEEELEQLENeLEAAALEERLKEARLllliaaallallglggsllslilTIA 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 138 ELQAHCETLEAQLRRAEWRQADTAKEKDAAIDQLREDASTVKSAWDAQIAQLS----------KEMVSRDLQIQTLQEEE 207
Cdd:COG4717 277 GVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGlppdlspeelLELLDRIEELQELLREA 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 208 VKLKAQVARSQQDIERYKQQLSLAVERERSLER--DQVQLGLDWQRRCDDIERDQIQKSEALIQGLSMA-KSQVAAKLQE 284
Cdd:COG4717 357 EELEEELQLEELEQEIAALLAEAGVEDEEELRAalEQAEEYQELKEELEELEEQLEELLGELEELLEALdEEELEEELEE 436
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 285 TEQALQEQEVVLKAVTLERDQAVQALRMHGLPRPGAQMLLRQHEEEiskdfpsSEIQRLREQNTSLRNAIAQMRKEMEAL 364
Cdd:COG4717 437 LEEELEELEEELEELREELAELEAELEQLEEDGELAELLQELEELK-------AELRELAEEWAALKLALELLEEAREEY 509
|
410
....*....|....
gi 2462554519 365 SHQIPPPIQTAAES 378
Cdd:COG4717 510 REERLPPVLERASE 523
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
47-222 |
2.53e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.37 E-value: 2.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 47 LQRAEATNAELERKLQSRAGELQDLEamsrARVKDLEDKLhsvqltrkkeeETFKRKHEELDRLAREKDAVLVAVKgAHV 126
Cdd:COG1579 12 LQELDSELDRLEHRLKELPAELAELE----DELAALEARL-----------EAAKTELEDLEKEIKRLELEIEEVE-ARI 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 127 EQLQELQTRVL---ELQAH---CETLEAQLRRAEwrqaDTAKEKDAAIDQLREDASTVKSAWDAQIAQLSKEMVSRDLQI 200
Cdd:COG1579 76 KKYEEQLGNVRnnkEYEALqkeIESLKRRISDLE----DEILELMERIEELEEELAELEAELAELEAELEEKKAELDEEL 151
|
170 180
....*....|....*....|..
gi 2462554519 201 QTLQEEEVKLKAQVARSQQDIE 222
Cdd:COG1579 152 AELEAELEELEAEREELAAKIP 173
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
32-360 |
2.87e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 44.65 E-value: 2.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 32 ELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAMSR-----------------ARVKDLEDKL-------- 86
Cdd:PRK02224 252 ELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDdllaeaglddadaeaveARREELEDRDeelrdrle 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 87 -HSVQLTRKKE------------EETFKRKHEELDRLAREKDAVLVAVKGAHvEQLQELQTRVLELQAHCETLEAQLRRA 153
Cdd:PRK02224 332 eCRVAAQAHNEeaeslredaddlEERAEELREEAAELESELEEAREAVEDRR-EEIEELEEEIEELRERFGDAPVDLGNA 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 154 EWRQADTAKEKDAAIDQLREDASTVKSAWD--AQIAQLSKE------------------MVSRDLQIQTLQEEEVKLKAQ 213
Cdd:PRK02224 411 EDFLEELREERDELREREAELEATLRTARErvEEAEALLEAgkcpecgqpvegsphvetIEEDRERVEELEAELEDLEEE 490
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 214 VARSQQDIERYKQQLSLAVERERSLERDQvqlglDWQRRCDDiERDQIQKSEALIQGLSMAKSQVAAKLQETEQALQE-- 291
Cdd:PRK02224 491 VEEVEERLERAEDLVEAEDRIERLEERRE-----DLEELIAE-RRETIEEKRERAEELRERAAELEAEAEEKREAAAEae 564
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462554519 292 ---QEVVLKAVTLERDQAVQALRMHGLPRPGAQMLLRQHEEEiskdfpssEIQRLREQntslRNAIAQMRKE 360
Cdd:PRK02224 565 eeaEEAREEVAELNSKLAELKERIESLERIRTLLAAIADAED--------EIERLREK----REALAELNDE 624
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
57-292 |
2.99e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.62 E-value: 2.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 57 LERKLQSRAGELQDLEAMSRARVKDLEDKLHSVQltrkKEEETFKRKHEELDrLAREKDAVLVAVKGAhVEQLQELQTRV 136
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAE----AALEEFRQKNGLVD-LSEEAKLLLQQLSEL-ESQLAEARAEL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 137 LELQAHCETLEAQLRRAEWRQADTAKekDAAIDQLREDASTVKsawdAQIAQLSK-------EMVSRDLQIQTLQEE--- 206
Cdd:COG3206 236 AEAEARLAALRAQLGSGPDALPELLQ--SPVIQQLRAQLAELE----AELAELSArytpnhpDVIALRAQIAALRAQlqq 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 207 -----EVKLKAQVARSQQDIERYKQQLSLAVERERSLERDQVQLgldwqrrcDDIERDqIQKSEALIQGLsmaksqvAAK 281
Cdd:COG3206 310 eaqriLASLEAELEALQAREASLQAQLAQLEARLAELPELEAEL--------RRLERE-VEVARELYESL-------LQR 373
|
250
....*....|.
gi 2462554519 282 LQETEQALQEQ 292
Cdd:COG3206 374 LEEARLAEALT 384
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
22-207 |
3.21e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.37 E-value: 3.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 22 RELKVKLlhKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAMSRARVKDLEDKLHSVQLTRKKEE-ETF 100
Cdd:COG4717 74 KELEEEL--KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALEAELAELPERlEEL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 101 KRKHEELDRLarekdavlvavkgahVEQLQELQTRVLELQAHCETLEAQLRRAEWRQADTAKEKDAAIDQLREDASTVKS 180
Cdd:COG4717 152 EERLEELREL---------------EEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELE 216
|
170 180
....*....|....*....|....*..
gi 2462554519 181 AWDAQIAQLSKEMVSRDLQIQTLQEEE 207
Cdd:COG4717 217 EAQEELEELEEELEQLENELEAAALEE 243
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
103-427 |
3.42e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 44.29 E-value: 3.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 103 KHEELDRLAREKDavlvavkgaHVEQLQELQTRVLELqahcetlEAQLRRAEWRQADTAKEkdaaidqlredastvksAW 182
Cdd:TIGR02169 196 KRQQLERLRRERE---------KAERYQALLKEKREY-------EGYELLKEKEALERQKE-----------------AI 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 183 DAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERE-RSLERDQVQLgldwqRRCDDIERDQI 261
Cdd:TIGR02169 243 ERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKiGELEAEIASL-----ERSIAEKEREL 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 262 QKSEALIQGLSMAKSQVAAKLQETEQALQEQEVVLKAVTLERDQAVQALrmhglprpgaqMLLRQHEEEISKDFpsseiq 341
Cdd:TIGR02169 318 EDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEEL-----------EDLRAELEEVDKEF------ 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 342 rlreqnTSLRNAIAQMRKEMEALSHQIPPPIQTAAESTDANQPDPEAGGDaatpdyvlaLEAEIRTLKHKFKTLEKHLED 421
Cdd:TIGR02169 381 ------AETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELAD---------LNAAIAGIEAKINELEEEKED 445
|
....*.
gi 2462554519 422 VLDPLK 427
Cdd:TIGR02169 446 KALEIK 451
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
25-363 |
5.44e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.98 E-value: 5.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 25 KVKLLHKELEALKEAGAKAAESLQRAEATNAELERKlqsRAGELQDLEAMSRARVKDLEDKLHSVQLTRKKEEEtfkRKH 104
Cdd:PTZ00121 1153 RVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVR---KAEELRKAEDARKAEAARKAEEERKAEEARKAEDA---KKA 1226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 105 EELDRLAREKDAVLVAVKGAHVEQLQELQTRVLELQAHCETLEAQLRRAEWRQAD---TAKEKDAAiDQLR--EDASTV- 178
Cdd:PTZ00121 1227 EAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADelkKAEEKKKA-DEAKkaEEKKKAd 1305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 179 ---KSAWDAQIAQLSK---EMVSRDLQIQTLQEEEVKLKAQVARSQQdiERYKQQLSLAVERERSLER---------DQV 243
Cdd:PTZ00121 1306 eakKKAEEAKKADEAKkkaEEAKKKADAAKKKAEEAKKAAEAAKAEA--EAAADEAEAAEEKAEAAEKkkeeakkkaDAA 1383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 244 QLGLDWQRRCDDIER---------DQIQKSEALIQGLSMAKSQvAAKLQETEQALQEQEVVLKAVTL----ERDQAVQAL 310
Cdd:PTZ00121 1384 KKKAEEKKKADEAKKkaeedkkkaDELKKAAAAKKKADEAKKK-AEEKKKADEAKKKAEEAKKADEAkkkaEEAKKAEEA 1462
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 2462554519 311 RMHGLPRPGAQMLLRQHEEEISKDFPSSEIQRLREQNTSLRNAIAQMRKEMEA 363
Cdd:PTZ00121 1463 KKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEA 1515
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
163-311 |
7.17e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.22 E-value: 7.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 163 EKDAAIDQLREDASTVK---SAWDAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSlAVERERSLE 239
Cdd:COG1579 14 ELDSELDRLEHRLKELPaelAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLG-NVRNNKEYE 92
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462554519 240 RDQVQLgldwqrrcdDIERDQIQKSEALIQGLSMAKSQVAAKLQETEQALQEQEVVLKAVTLERDQAVQALR 311
Cdd:COG1579 93 ALQKEI---------ESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELE 155
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
199-382 |
8.06e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.37 E-value: 8.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 199 QIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERERSLER--DQVQLGLDW---QRRCDDIE--RDQIQKSEALIQGL 271
Cdd:COG4913 611 KLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRlaEYSWDEIDVasaEREIAELEaeLERLDASSDDLAAL 690
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 272 SMAKSQVAAKLQETEQALQEQEVVLKAVTLERDQAVQAL-----RMHGLPRPG------------AQMLLRQHEEEISKD 334
Cdd:COG4913 691 EEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELdelqdRLEAAEDLArlelralleerfAAALGDAVERELREN 770
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2462554519 335 FpSSEIQRLREQntsLRNAIAQMRKEMEALSHQIPPPIQTAAESTDAN 382
Cdd:COG4913 771 L-EERIDALRAR---LNRAEEELERAMRAFNREWPAETADLDADLESL 814
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
29-219 |
1.22e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.59 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 29 LHKELEALKEAGAKAAesLQRAEATNAELERKLQSRAGELQDLEAmsrarvkdledklhsvqltrkkEEETFKRKHEELD 108
Cdd:COG4913 267 ARERLAELEYLRAALR--LWFAQRRLELLEAELEELRAELARLEA----------------------ELERLEARLDALR 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 109 RLAREKDAVLVAVKGAHVEQLQE----LQTRVLELQAHCETLEAQLRRAEWRQADTAKEkdaaIDQLREDASTVKSAWDA 184
Cdd:COG4913 323 EELDELEAQIRGNGGDRLEQLEReierLERELEERERRRARLEALLAALGLPLPASAEE----FAALRAEAAALLEALEE 398
|
170 180 190
....*....|....*....|....*....|....*
gi 2462554519 185 QIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQ 219
Cdd:COG4913 399 ELEALEEALAEAEAALRDLRRELRELEAEIASLER 433
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
23-301 |
1.24e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 42.72 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 23 ELKVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQsragELQDLEAmsrarvkDLEDklhsvqlTRKKEEETFkR 102
Cdd:PRK02224 212 ESELAELDEEIERYEEQREQARETRDEADEVLEEHEERRE----ELETLEA-------EIED-------LRETIAETE-R 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 103 KHEELDRLAREKDavlvavkgahvEQLQELQTRVLELQAHCETLEAQLRRAEWRQADTAKEKDAAIDQLREdASTVKSAW 182
Cdd:PRK02224 273 EREELAEEVRDLR-----------ERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEE-CRVAAQAH 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 183 DAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERERSLErdqvqlgldwqRRCDDIErDQIQ 262
Cdd:PRK02224 341 NEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELR-----------ERFGDAP-VDLG 408
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 2462554519 263 KSEALIQGLSMAKSQVAAKLQETEQALQE-QEVVLKAVTL 301
Cdd:PRK02224 409 NAEDFLEELREERDELREREAELEATLRTaRERVEEAEAL 448
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
25-427 |
1.45e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 42.36 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 25 KVKLLHKELEALKEAGAKAAESLQRAEATN---AELERKLQSRAGELQDLEAM----------SRARVKDLEDKLHSVQL 91
Cdd:PRK03918 208 EINEISSELPELREELEKLEKEVKELEELKeeiEELEKELESLEGSKRKLEEKireleerieeLKKEIEELEEKVKELKE 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 92 TRKKEEE-----TFKRKH-EELDRLAREKDAVLVAVKG--AHVEQLQELQTRVLELQAHCETLEAQLRRAE--WRQADTA 161
Cdd:PRK03918 288 LKEKAEEyiklsEFYEEYlDELREIEKRLSRLEEEINGieERIKELEEKEERLEELKKKLKELEKRLEELEerHELYEEA 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 162 KEKDAAIDQLRedastvksawdAQIAQLSKEMVSRDLQI-----QTLQEEEVKLKAQVARSQQDIErykqQLSLAVERER 236
Cdd:PRK03918 368 KAKKEELERLK-----------KRLTGLTPEKLEKELEElekakEEIEEEISKITARIGELKKEIK----ELKKAIEELK 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 237 SLERDQVQLGldwqRRCDDIERdqiqksEALIQGLSMAKSQVAAKLQETEQALQEQEVVLKAVTLERDQAVQALRMHGLP 316
Cdd:PRK03918 433 KAKGKCPVCG----RELTEEHR------KELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELA 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 317 RpgaqmLLRQHEEEISKdFPSSEIQRLREQNTSLRNAIAQMRKEMEALSHQIpppiqtaaestdanqpdpeaggdaatpD 396
Cdd:PRK03918 503 E-----QLKELEEKLKK-YNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKEL---------------------------E 549
|
410 420 430
....*....|....*....|....*....|.
gi 2462554519 397 YVLALEAEIRTLKHKFKTLEKHLEDVLDPLK 427
Cdd:PRK03918 550 KLEELKKKLAELEKKLDELEEELAELLKELE 580
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
203-365 |
1.62e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.93 E-value: 1.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 203 LQEEEVKLKAQVARSQQDIERYKQ---------QLSLAVERERSLERDQVQLGLDWQRRCDDIERDQIQKSEALIQGLSM 273
Cdd:COG3206 180 LEEQLPELRKELEEAEAALEEFRQknglvdlseEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPEL 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 274 AKSQVAAKLQETEQALQEQEVVLKAVTLERDQAVQALRmhglprpgAQM--LLRQHEEEISKDFPS--SEIQRLREQNTS 349
Cdd:COG3206 260 LQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALR--------AQIaaLRAQLQQEAQRILASleAELEALQAREAS 331
|
170
....*....|....*.
gi 2462554519 350 LRNAIAQMRKEMEALS 365
Cdd:COG3206 332 LQAQLAQLEARLAELP 347
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
4-420 |
1.64e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 42.26 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 4 REHEFRLQADNMSNTALSRELKVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAM--------- 74
Cdd:TIGR00618 378 TQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITctaqcekle 457
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 75 ------SRARVKDLEDKLHSVQLTRKKEEET------FKRKHEELDRLAREK------DAVLVAVKGAHVEQLQELQTRV 136
Cdd:TIGR00618 458 kihlqeSAQSLKEREQQLQTKEQIHLQETRKkavvlaRLLELQEEPCPLCGScihpnpARQDIDNPGPLTRRMQRGEQTY 537
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 137 LELQAHCETLEAQLrRAEWRQADTAKEKDAAIDQLREDASTVKSAWDAQIAQLSKEMVSRDLQIQTLQEEEVKL------ 210
Cdd:TIGR00618 538 AQLETSEEDVYHQL-TSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLaceqha 616
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 211 ---KAQVARSQQDIERYKQQLSLAVERER-SLERDQVQLGLDWQR----RCDDIERDQIQKSEALIQGLSMAKSQVAAKL 282
Cdd:TIGR00618 617 llrKLQPEQDLQDVRLHLQQCSQELALKLtALHALQLTLTQERVRehalSIRVLPKELLASRQLALQKMQSEKEQLTYWK 696
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 283 QETEQ---ALQEQEVVLKAVTLERDQAVQALRMHGLPRPGAQMLLRQHEEEISKDFPSS-EIQRLREQNTSLRNAIAQMR 358
Cdd:TIGR00618 697 EMLAQcqtLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVlKARTEAHFNNNEEVTAALQT 776
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462554519 359 KEMEALSHQIPPPIQTAAESTDANQPDPEAGGDAATPDYVLALEAEIRTLKHKFKTLEKHLE 420
Cdd:TIGR00618 777 GAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLE 838
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
7-428 |
1.66e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.93 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 7 EFRLQADNMSNtalsRELKVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAMSRARVKDLEDKL 86
Cdd:TIGR04523 111 EIKNDKEQKNK----LEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQ 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 87 HSVQLTRKKE--EETFKRKHEELDRLAREKDAVLVAVKgahvEQLQELQTRVLELQAHCETLEAQLRRAEWRQADTAKEK 164
Cdd:TIGR04523 187 KNIDKIKNKLlkLELLLSNLKKKIQKNKSLESQISELK----KQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQ 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 165 DAAIDQLREDASTVKSAwDAQIAQLSKEMVSRDLQIQTL-------------------QEEEVKLKAQVARSQQDIERYK 225
Cdd:TIGR04523 263 NKIKKQLSEKQKELEQN-NKKIKELEKQLNQLKSEISDLnnqkeqdwnkelkselknqEKKLEEIQNQISQNNKIISQLN 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 226 QQLSlavererSLERDQVQLGLDWQRRCDDIER--DQIQKSEALIQGLSMAKSQVAAKLQETEQALQEQEVVLKavtlER 303
Cdd:TIGR04523 342 EQIS-------QLKKELTNSESENSEKQRELEEkqNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQ----QK 410
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 304 DQAVQALRmhglprpgaqmllrQHEEEISKdfpssEIQRLREQNTSLRNAIAQMRKEMEALSHQIpppiqtaaESTDANQ 383
Cdd:TIGR04523 411 DEQIKKLQ--------------QEKELLEK-----EIERLKETIIKNNSEIKDLTNQDSVKELII--------KNLDNTR 463
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 2462554519 384 PDPEaggdaatpDYVLALEAEIRTLKHKFKTLEKHLEDVLDPLKM 428
Cdd:TIGR04523 464 ESLE--------TQLKVLSRSINKIKQNLEQKQKELKSKEKELKK 500
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
29-247 |
1.98e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.68 E-value: 1.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 29 LHKELEAL-KEAGAKAAESLQRAEATNAELeRKLQSRAGELQDLEAM---SRARVKDLEDKLHSVQ--LTRKKEEETFKR 102
Cdd:COG4717 51 LEKEADELfKPQGRKPELNLKELKELEEEL-KEAEEKEEEYAELQEEleeLEEELEELEAELEELReeLEKLEKLLQLLP 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 103 KHEELDRLAREkdavlVAVKGAHVEQLQELQTRVLELQAHCETLEAQLRRAEwrqadtakekdAAIDQLREDASTvksAW 182
Cdd:COG4717 130 LYQELEALEAE-----LAELPERLEELEERLEELRELEEELEELEAELAELQ-----------EELEELLEQLSL---AT 190
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462554519 183 DAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERERSLERDQVQLGL 247
Cdd:COG4717 191 EEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIA 255
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
33-309 |
2.02e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.86 E-value: 2.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 33 LEALKEAGAKAAESLQRAEAT--NAELERK---------------LQSRAGELQD-LEAMSRARVKDLEDKLHSVQLtrK 94
Cdd:COG3096 363 LEEQEEVVEEAAEQLAEAEARleAAEEEVDslksqladyqqaldvQQTRAIQYQQaVQALEKARALCGLPDLTPENA--E 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 95 KEEETFKRKHEELDRL---AREKDAVLVAVKGAHVEQLQELQTRVLEL---QAHcETLEAQLRRaeWR----QADTAKEK 164
Cdd:COG3096 441 DYLAAFRAKEQQATEEvleLEQKLSVADAARRQFEKAYELVCKIAGEVersQAW-QTARELLRR--YRsqqaLAQRLQQL 517
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 165 DAAIDQLREDASTVKSAwDAQIAQLSKEMvSRDLQIQTLQEEEvklkaqVARSQQDIERYKQQLSLAVERERSLERDQVQ 244
Cdd:COG3096 518 RAQLAELEQRLRQQQNA-ERLLEEFCQRI-GQQLDAAEELEEL------LAELEAQLEELEEQAAEAVEQRSELRQQLEQ 589
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462554519 245 LGLDwQRRCDDIERDQIQKSEALIQgLSMAKSQVAAKLQETEQALQEQEVVLKAVTLERDQAVQA 309
Cdd:COG3096 590 LRAR-IKELAARAPAWLAAQDALER-LREQSGEALADSQEVTAAMQQLLEREREATVERDELAAR 652
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
43-353 |
2.10e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.87 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 43 AAESLQRAEATNAELERKLQSRAGELQDLEAMSR------ARVKDLE-------DKLHSVQlTRKKEEETFKRKHEELDR 109
Cdd:PRK04863 281 RRVHLEEALELRRELYTSRRQLAAEQYRLVEMARelaelnEAESDLEqdyqaasDHLNLVQ-TALRQQEKIERYQADLEE 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 110 LAREKDAVLVAVKGAHvEQLQELQTR-------VLELQA----HCETLEAQLRRA-EWRQADTAKEKDAAIDQLREDAST 177
Cdd:PRK04863 360 LEERLEEQNEVVEEAD-EQQEENEARaeaaeeeVDELKSqladYQQALDVQQTRAiQYQQAVQALERAKQLCGLPDLTAD 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 178 VKSAWDAQIAQLSKEMVSRDLQIQTlqeeevKLK-AQVARSQQDiERYK--QQLSLAVERE------RSLERD------Q 242
Cdd:PRK04863 439 NAEDWLEEFQAKEQEATEELLSLEQ------KLSvAQAAHSQFE-QAYQlvRKIAGEVSRSeawdvaRELLRRlreqrhL 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 243 VQLGLDWQRRCDDIERD--QIQKSEALIQGLSMAKSQVAAKLQETEQALQEQEVVLKAVTLERDQAVQalrmhglprpgA 320
Cdd:PRK04863 512 AEQLQQLRMRLSELEQRlrQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARE-----------R 580
|
330 340 350
....*....|....*....|....*....|...
gi 2462554519 321 QMLLRQHEEEIskdfpSSEIQRLREQNTSLRNA 353
Cdd:PRK04863 581 RMALRQQLEQL-----QARIQRLAARAPAWLAA 608
|
|
| GAS |
pfam13851 |
Growth-arrest specific micro-tubule binding; This family is the highly conserved central ... |
23-189 |
2.18e-03 |
|
Growth-arrest specific micro-tubule binding; This family is the highly conserved central region of a number of metazoan proteins referred to as growth-arrest proteins. In mouse, Gas8 is predominantly a testicular protein, whose expression is developmentally regulated during puberty and spermatogenesis. In humans, it is absent in infertile males who lack the ability to generate gametes. The localization of Gas8 in the motility apparatus of post-meiotic gametocytes and mature spermatozoa, together with the detection of Gas8 also in cilia at the apical surfaces of epithelial cells lining the pulmonary bronchi and Fallopian tubes suggests that the Gas8 protein may have a role in the functioning of motile cellular appendages. Gas8 is a microtubule-binding protein localized to regions of dynein regulation in mammalian cells.
Pssm-ID: 464001 [Multi-domain] Cd Length: 200 Bit Score: 40.27 E-value: 2.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 23 ELKVKLLH--KELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAmSRARVKDLEDKLHSVQLTRKKEEETF 100
Cdd:pfam13851 37 ELKKKEERneKLMSEIQQENKRLTEPLQKAQEEVEELRKQLENYEKDKQSLKN-LKARLKVLEKELKDLKWEHEVLEQRF 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 101 KRKHEELDRLAREKDAVLVAVKGAHVEQLQELQTRVLELQAHCETLEAQLrrAEWRQAdtAKEKDAAIDQLREDASTVKS 180
Cdd:pfam13851 116 EKVERERDELYDKFEAAIQDVQQKTGLKNLLLEKKLQALGETLEKKEAQL--NEVLAA--ANLDPDALQAVTEKLEDVLE 191
|
....*....
gi 2462554519 181 AWDAQIAQL 189
Cdd:pfam13851 192 SKNQLIKDL 200
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
630-838 |
2.37e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.85 E-value: 2.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 630 RAELGRPERWLLHHALPPAPEARKPGEEPRRPLDRSPPLGQVQPhfTSQDAKSAEDEAPSR-HLGKHQPRSAQVGSGLNT 708
Cdd:PHA03247 2602 VDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPT--VPPPERPRDDPAPGRvSRPRRARRLGRAAQASSP 2679
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 709 LQGPKTQHSIHTVTCKSPRQKEDRSPKPPQAPKHPEEHGRqshssssfasgtlqdtwrlldlgSSPSGVTSQGDSTPELP 788
Cdd:PHA03247 2680 PQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSAT-----------------------PLPPGPAAARQASPALP 2736
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 2462554519 789 APPAADRRPvkmqAGIATPGMKTAAQAKAKTTGASRSHPAKAKGCQGPPK 838
Cdd:PHA03247 2737 AAPAPPAVP----AGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRR 2782
|
|
| Rab5-bind |
pfam09311 |
Rabaptin-like protein; Members of this family are predominantly found in Rabaptin and allow ... |
31-311 |
2.56e-03 |
|
Rabaptin-like protein; Members of this family are predominantly found in Rabaptin and allow for binding to the GTPase Rab5. This interaction is necessary and sufficient for Rab5-dependent recruitment of Rabaptin5 to early endosomal membranes.
Pssm-ID: 462752 [Multi-domain] Cd Length: 307 Bit Score: 40.72 E-value: 2.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 31 KELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAMSRARVKDLEDKLHSVQLTRKKEE---ETFKRKHEEL 107
Cdd:pfam09311 9 KQLQAIQEQEAETRDQVKKLQEMLRQANDQLEKTMKDKKELEDKMNQLSEETSNQVSTLAKRNQKSEtllDELQQAFSQA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 108 DRLAREKDAVLVAVKGAHVEQLQELQTRVLELQAHcETLEAQLRRAE-WRQADTAKEKDAAIDQLREDASTVKSAWDAQI 186
Cdd:pfam09311 89 KRNFQDQLAVLMDSREQVSDELVRLQKDNESLQGK-HSLHVSLQQAEkFDMPDTVQELQELVLKYREELIEVRTAADHME 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 187 AQLSKEMVSRDLQIqtlQEEEVKLKAQVARSQQDIERYKQQL----SLAVERERS-LERDQVQLGLDWQRRcddierdQI 261
Cdd:pfam09311 168 EKLKAEILFLKEQI---QAEQCLKENLEETLQAEIENCKEEIasisSLKVELERIkAEKEQLENGLTEKIR-------QL 237
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2462554519 262 QKSEALIQGLSMAKSQVAAKLQETEQALQEQEVVLKAVTLERDQAVQALR 311
Cdd:pfam09311 238 EDLQTTKGSLETQLKKETNEKAAVEQLVFEEKNKAQRLQTELDVSEQVQR 287
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
157-407 |
2.68e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.97 E-value: 2.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 157 QADT-AKEKDAAIDQLREDASTVKS---AWDAQIAQLSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSlav 232
Cdd:COG3883 13 FADPqIQAKQKELSELQAELEAAQAeldALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELG--- 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 233 ERERSLERDQVQLGL-----------DWQRRCDDIER------DQIQKSEALIQGLSMAKSQVAAKLQETEQALQEQEVV 295
Cdd:COG3883 90 ERARALYRSGGSVSYldvllgsesfsDFLDRLSALSKiadadaDLLEELKADKAELEAKKAELEAKLAELEALKAELEAA 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 296 LKAvtLERDQAVQALRMHGLPRPGAQMLLRQHEEEISKDFPSSEIQRLREQNTSLRNAIAQMRKEMEALshQIPPPIQTA 375
Cdd:COG3883 170 KAE--LEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAA--AAAAAAAAS 245
|
250 260 270
....*....|....*....|....*....|..
gi 2462554519 376 AESTDANQPDPEAGGDAATPDYVLALEAEIRT 407
Cdd:COG3883 246 AAGAGAAGAAGAAAGSAGAAGAAAGAAGAGAA 277
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
191-362 |
2.77e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 41.26 E-value: 2.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 191 KEMVSRDLQIQTLQEEEVKLKAQVARSQQDIerYKQQLSLAVERERSLER---------------DQVQLGLDWQRRCDD 255
Cdd:pfam17380 305 KEEKAREVERRRKLEEAEKARQAEMDRQAAI--YAEQERMAMERERELERirqeerkrelerirqEEIAMEISRMRELER 382
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 256 IERDQIQKSEALIQGLSMAKSQvaaKLQETE--QALQEQEVVLKAVTLERDQAVQaLRMHGLPRPGAQMLLRQHEEEISK 333
Cdd:pfam17380 383 LQMERQQKNERVRQELEAARKV---KILEEErqRKIQQQKVEMEQIRAEQEEARQ-REVRRLEEERAREMERVRLEEQER 458
|
170 180
....*....|....*....|....*....
gi 2462554519 334 dfpSSEIQRLREQNTSLRNAIAQMRKEME 362
Cdd:pfam17380 459 ---QQQVERLRQQEEERKRKKLELEKEKR 484
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
23-133 |
2.93e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.92 E-value: 2.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 23 ELKVKLLHKELEALKEAGAKAAESLQRAEATNA---------ELERKLQSRAGELQDLEAMSRARVKDLEDKLHSVqltr 93
Cdd:PRK12704 30 EAKIKEAEEEAKRILEEAKKEAEAIKKEALLEAkeeihklrnEFEKELRERRNELQKLEKRLLQKEENLDRKLELL---- 105
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2462554519 94 KKEEETFKRKHEELDRLAREKDAVLVAVKGAHVEQLQELQ 133
Cdd:PRK12704 106 EKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELE 145
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
29-239 |
2.93e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 41.03 E-value: 2.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 29 LHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAMSRARVKDLEDKLHSVQltrkkeeetfkRKHEEld 108
Cdd:pfam07888 46 LLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELS-----------ASSEE-- 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 109 rLAREKDAvLVAVKGAHVEQLQELQTRVLELQAHCETLEAQLRRAEwrqaDTAKEkdaAIDQLREDASTvKSAWDAQIAQ 188
Cdd:pfam07888 113 -LSEEKDA-LLAQRAAHEARIRELEEDIKTLTQRVLERETELERMK----ERAKK---AGAQRKEEEAE-RKQLQAKLQQ 182
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2462554519 189 LSKEMVSRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERERSLE 239
Cdd:pfam07888 183 TEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAENE 233
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
25-148 |
2.98e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.18 E-value: 2.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 25 KVKLLHKELEALK---EAGAKAAESLQRAEATNAELERkLQSRAGELQDLEAMSRARVKDL------------EDKLHSV 89
Cdd:PRK02224 573 EVAELNSKLAELKeriESLERIRTLLAAIADAEDEIER-LREKREALAELNDERRERLAEKrerkreleaefdEARIEEA 651
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462554519 90 QLTRKKEEETFKRKHEELDRLAREKDAVLVAVKGAH--VEQLQELQTRVLELQAHCETLEA 148
Cdd:PRK02224 652 REDKERAEEYLEQVEEKLDELREERDDLQAEIGAVEneLEELEELRERREALENRVEALEA 712
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
49-241 |
3.01e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 41.03 E-value: 3.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 49 RAEATNAELERKLQSRAGELQDLEAmsrarvkdledklhsVQLTRKKEEETFKRKHEELDRLAREKDavlvavkgahvEQ 128
Cdd:pfam07888 28 RAELLQNRLEECLQERAELLQAQEA---------------ANRQREKEKERYKRDREQWERQRRELE-----------SR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 129 LQELQTRVLELQAHCETLEAQLRRAEWRQADTAKEKDAAIDQLREDASTVKSAWDaQIAQLSKEMVSRDLQIQTLQEEEV 208
Cdd:pfam07888 82 VAELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAAHEARIRELEE-DIKTLTQRVLERETELERMKERAK 160
|
170 180 190
....*....|....*....|....*....|...
gi 2462554519 209 KLKAQVARSQQDIERYKQQLSLAVERERSLERD 241
Cdd:pfam07888 161 KAGAQRKEEEAERKQLQAKLQQTEEELRSLSKE 193
|
|
| CENP-F_leu_zip |
pfam10473 |
Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; Cenp-F, a centromeric kinetochore, ... |
42-172 |
3.29e-03 |
|
Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway. There are several leucine-rich repeats along the sequence of LEK1 that are considered to be zippers, though they do not appear to be binding DNA directly in this instance.
Pssm-ID: 463102 [Multi-domain] Cd Length: 140 Bit Score: 38.82 E-value: 3.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 42 KAAESLQRAEATNAELERKLQSRAGELQDLEAMSRARVKDLEdklhsvqlTRKKEEETFKRKHEELDRLAREKDAVLVAV 121
Cdd:pfam10473 7 HVLEKLKESERKADSLKDKVENLERELEMSEENQELAILEAE--------NSKAEVETLKAEIEEMAQNLRDLELDLVTL 78
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 2462554519 122 KGAHVE---QLQELQTRVLELQAHCETLEAQLRRAEWRQADTAKEKDAAIDQLR 172
Cdd:pfam10473 79 RSEKENltkELQKKQERVSELESLNSSLENLLEEKEQEKVQMKEESKTAVEMLQ 132
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
127-307 |
3.40e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 40.77 E-value: 3.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 127 EQLQELQTRVLELQAHCETLEAQ---LRRAEWRQADTAKEKDAAIDQLREDASTVKSAWD---AQIAQLSKEMVSRDLQI 200
Cdd:PHA02562 178 ELNQQIQTLDMKIDHIQQQIKTYnknIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEeltDELLNLVMDIEDPSAAL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 201 QTLQEEEVKLKAQVARSQQDIERY---------KQQLSLAVERERSLERDQVQLgldwQRRCDDIE--RDQIQKSEALIQ 269
Cdd:PHA02562 258 NKLNTAAAKIKSKIEQFQKVIKMYekggvcptcTQQISEGPDRITKIKDKLKEL----QHSLEKLDtaIDELEEIMDEFN 333
|
170 180 190
....*....|....*....|....*....|....*...
gi 2462554519 270 GLSMAKSQVAAKLQETEQALQEQEVVLKAVTLERDQAV 307
Cdd:PHA02562 334 EQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQ 371
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
25-420 |
6.00e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 40.49 E-value: 6.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 25 KVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAMSRARVKDLEDKLHSVQLtrkkeeetfkrKH 104
Cdd:pfam15921 462 KVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDL-----------KL 530
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 105 EELDRLAREKDavlvavkgahveQLQELQTrvlelqaHCETLEAQLrraewrqadtaKEKDAAIDQLREDASTVKS---- 180
Cdd:pfam15921 531 QELQHLKNEGD------------HLRNVQT-------ECEALKLQM-----------AEKDKVIEILRQQIENMTQlvgq 580
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 181 ------AWDAQIAQLSKEMVSRDLQIQTLQ----EEEVKLKAQVARSqQDIERYKQQL-SLAVERERSL-----ERDQVq 244
Cdd:pfam15921 581 hgrtagAMQVEKAQLEKEINDRRLELQEFKilkdKKDAKIRELEARV-SDLELEKVKLvNAGSERLRAVkdikqERDQL- 658
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 245 lgLDWQRRCddieRDQIQkseALIQGLSMAKSQVAAKLQETEQALQEQEVVLKAVTLERDQAVQALR-MHGLPRPGAQML 323
Cdd:pfam15921 659 --LNEVKTS----RNELN---SLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKsMEGSDGHAMKVA 729
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 324 LRQHEEEISK----DFPSSEIQRLREQNTSLRNAIAQMRKEMEALSHQIpppiqtaaeSTDANQPDPEAGgdaatpdYVL 399
Cdd:pfam15921 730 MGMQKQITAKrgqiDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQEL---------STVATEKNKMAG-------ELE 793
|
410 420
....*....|....*....|.
gi 2462554519 400 ALEAEIRTLKHKFKTLEKHLE 420
Cdd:pfam15921 794 VLRSQERRLKEKVANMEVALD 814
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
254-421 |
6.92e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 39.84 E-value: 6.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 254 DDIERDQIqKSEaLIQGLSMAksQVAAKLQETEQALQEQEVVLKAVTLERDQAvqalrmhglprpgaqmllrQHEEEISK 333
Cdd:COG2433 361 PDVDRDEV-KAR-VIRGLSIE--EALEELIEKELPEEEPEAEREKEHEERELT-------------------EEEEEIRR 417
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 334 dfPSSEIQRLREQNTSLRNAIAQMRKEMEALShqipppiqtaAESTDANQpdpEAGGDAATPDYVLALEAEIRTLKHKFK 413
Cdd:COG2433 418 --LEEQVERLEAEVEELEAELEEKDERIERLE----------RELSEARS---EERREIRKDREISRLDREIERLERELE 482
|
....*...
gi 2462554519 414 TLEKHLED 421
Cdd:COG2433 483 EERERIEE 490
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
6-244 |
7.17e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 40.33 E-value: 7.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 6 HEFRLQADNMSNTALSRELKVKLLhkelEALKEAGAKAAESLQ-------RAEATNA--ELERKLQSRAGELQDLEAMsR 76
Cdd:PRK04863 445 EEFQAKEQEATEELLSLEQKLSVA----QAAHSQFEQAYQLVRkiagevsRSEAWDVarELLRRLREQRHLAEQLQQL-R 519
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 77 ARVKDLEDKLhsvqltrkkeeetfkRKHEELDRLAREKDAVLvavkGAHVEQLQELQTRVLELQAHCETLEAQLRRAEWR 156
Cdd:PRK04863 520 MRLSELEQRL---------------RQQQRAERLLAEFCKRL----GKNLDDEDELEQLQEELEARLESLSESVSEARER 580
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 157 QADTAKEkdaaIDQLredastvksawDAQIAQLSKemvsRDLQIQTLQEEEVKLKAQVARSQQDIERYKQQLSLAVERER 236
Cdd:PRK04863 581 RMALRQQ----LEQL-----------QARIQRLAA----RAPAWLAAQDALARLREQSGEEFEDSQDVTEYMQQLLERER 641
|
250
....*....|
gi 2462554519 237 SL--ERDQVQ 244
Cdd:PRK04863 642 ELtvERDELA 651
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
7-162 |
8.23e-03 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 39.93 E-value: 8.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 7 EFRLQADNmSNTALSRELKVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAmsrarvkDLEdkl 86
Cdd:PRK11448 133 PFVPPEDP-ENLLHALQQEVLTLKQQLELQAREKAQSQALAEAQQQELVALEGLAAELEEKQQELEA-------QLE--- 201
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462554519 87 hsvQLtRKKEEETfkrkheELDRLAREKDAVLVAVKgahVEQLQELQTRVLelqahcetLEAQLRRAEWrQADTAK 162
Cdd:PRK11448 202 ---QL-QEKAAET------SQERKQKRKEITDQAAK---RLELSEEETRIL--------IDQQLRKAGW-EADSKT 255
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
7-406 |
9.31e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 39.56 E-value: 9.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 7 EFRLQADNMSNTALSRELKVKLLHKELEALKEAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAMSRA--RVKDLED 84
Cdd:COG5185 184 LTLGLLKGISELKKAEPSGTVNSIKESETGNLGSESTLLEKAKEIINIEEALKGFQDPESELEDLAQTSDKleKLVEQNT 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 85 KLHSVQLTRKKEeeTFKRKHEELDRLAREKDAvlvavkgaHVEQLQELqTRVLELQAHCETLEAQLRRAEWRQ--ADTAK 162
Cdd:COG5185 264 DLRLEKLGENAE--SSKRLNENANNLIKQFEN--------TKEKIAEY-TKSIDIKKATESLEEQLAAAEAEQelEESKR 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 163 EKDAAIDQLredastvksawdaqIAQLSKEMVSRDLQIQTLQE--EEVKLKAQVARSQQDIERYKQQLslaverERSLER 240
Cdd:COG5185 333 ETETGIQNL--------------TAEIEQGQESLTENLEAIKEeiENIVGEVELSKSSEELDSFKDTI------ESTKES 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 241 DQVQLGlDWQRRCDDIErdqiqksEALIQGLSMAKSQVAAKLQETEQALQE-QEVVLKAVTLERDQAVQALRMHGLPRPG 319
Cdd:COG5185 393 LDEIPQ-NQRGYAQEIL-------ATLEDTLKAADRQIEELQRQIEQATSSnEEVSKLLNELISELNKVMREADEESQSR 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 320 AQMLLRQHEEEIskdfpSSEIQRLREQNTSLRNAIAQMRKEMEALSHQIPPPIQTAAESTDANQPDPEAGGDAATPDYVL 399
Cdd:COG5185 465 LEEAYDEINRSV-----RSKKEDLNEELTQIESRVSTLKATLEKLRAKLERQLEGVRSKLDQVAESLKDFMRARGYAHIL 539
|
....*..
gi 2462554519 400 ALEAEIR 406
Cdd:COG5185 540 ALENLIP 546
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
22-309 |
9.57e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 39.94 E-value: 9.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 22 RELKVKLLHKELEALKEAGAKAA---ESLQRA--------------------EATNAELERKLQSRAGELQDLEA---MS 75
Cdd:PRK04863 784 REKRIEQLRAEREELAERYATLSfdvQKLQRLhqafsrfigshlavafeadpEAELRQLNRRRVELERALADHESqeqQQ 863
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 76 RARVKDLEDKLHSVQ----LTRKKEEETFKRKHEEL-DRLAR-EKDAVLVAVKGAHVEQLQELQTRVLELQAHCETLEAQ 149
Cdd:PRK04863 864 RSQLEQAKEGLSALNrllpRLNLLADETLADRVEEIrEQLDEaEEAKRFVQQHGNALAQLEPIVSVLQSDPEQFEQLKQD 943
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 150 LRRAEWRQADTAKEKDaAIDQLREDASTVKSAWDAQIaqLSKEmvsrdlqiQTLQEeevKLKAQVARSQQDIERYKQQLS 229
Cdd:PRK04863 944 YQQAQQTQRDAKQQAF-ALTEVVQRRAHFSYEDAAEM--LAKN--------SDLNE---KLRQRLEQAEQERTRAREQLR 1009
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462554519 230 LAVERERslERDQVQLGLD------------WQRRCDDI---------ERDQIQKSEaLIQGLS---MAKSQVAAKLQET 285
Cdd:PRK04863 1010 QAQAQLA--QYNQVLASLKssydakrqmlqeLKQELQDLgvpadsgaeERARARRDE-LHARLSanrSRRNQLEKQLTFC 1086
|
330 340
....*....|....*....|....*...
gi 2462554519 286 EQALQEQEVVLKAV----TLERDQAVQA 309
Cdd:PRK04863 1087 EAEMDNLTKKLRKLerdyHEMREQVVNA 1114
|
|
| |
