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Conserved domains on  [gi|2462492119|ref|XP_054185428|]
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glutathione S-transferase theta-4 isoform X5 [Homo sapiens]

Protein Classification

glutathione S-transferase family protein( domain architecture ID 88)

glutathione S-transferase (GST) family protein may catalyze the conjugation of reduced glutathione to a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GST_C_family super family cl02776
C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione ...
90-188 2.33e-32

C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Based on sequence similarity, different classes of GSTs have been identified, which display varying tissue distribution, substrate specificities and additional specific activities. In humans, GSTs display polymorphisms which may influence individual susceptibility to diseases such as cancer, arthritis, allergy and sclerosis. Some GST family members with non-GST functions include glutaredoxin 2, the CLIC subfamily of anion channels, prion protein Ure2p, crystallins, metaxins, stringent starvation protein A, and aminoacyl-tRNA synthetases.


The actual alignment was detected with superfamily member cd03183:

Pssm-ID: 470672 [Multi-domain]  Cd Length: 126  Bit Score: 113.46  E-value: 2.33e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462492119  90 LIPKITGEEVSAEKMEHAVEEVKNSLQLFEEYFLQDKMFITGNQISLADLVAVVEMMQPMAANYNVFLNSSKLAEWRMQV 169
Cdd:cd03183    29 LLPLFGGTPVSPEKVKKAEENLEESLDLLENKFLKDKPFLAGDEISIADLSAICEIMQPEAAGYDVFEGRPKLAAWRKRV 108
                          90
                  ....*....|....*....
gi 2462492119 170 ElNIGSGLFREAHDRLMQL 188
Cdd:cd03183   109 K-EAGNPLFDEAHKVIYKL 126
GstA super family cl33984
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
29-143 7.03e-09

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


The actual alignment was detected with superfamily member COG0625:

Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 53.75  E-value: 7.03e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462492119  29 RASGHHHSKEYIDINPLRKLPSLKDGKFILSESR--QEY-------RDLAGQ-----------VALECSLLFPPLPNPGQ 88
Cdd:COG0625    34 LAKGEQKSPEFLALNPLGKVPVLVDDGLVLTESLaiLEYlaerypePPLLPAdpaararvrqwLAWADGDLHPALRNLLE 113
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2462492119  89 LLIPkitgeEVSAEKMEHAVEEVKNSLQLFEEYfLQDKMFITGNQISLADLVAVV 143
Cdd:COG0625   114 RLAP-----EKDPAAIARARAELARLLAVLEAR-LAGGPYLAGDRFSIADIALAP 162
 
Name Accession Description Interval E-value
GST_C_Theta cd03183
C-terminal, alpha helical domain of Class Theta Glutathione S-transferases; Glutathione ...
90-188 2.33e-32

C-terminal, alpha helical domain of Class Theta Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DCM as sole carbon and energy sources. The presence of polymorphisms in human GSTT1-1 and its relationship to the onset of diseases including cancer is the subject of many studies. Human GSTT2-2 exhibits a highly specific sulfatase activity, catalyzing the cleavage of sulfate ions from aralkyl sufate esters, but not from the aryl or alkyl sulfate esters.


Pssm-ID: 198292 [Multi-domain]  Cd Length: 126  Bit Score: 113.46  E-value: 2.33e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462492119  90 LIPKITGEEVSAEKMEHAVEEVKNSLQLFEEYFLQDKMFITGNQISLADLVAVVEMMQPMAANYNVFLNSSKLAEWRMQV 169
Cdd:cd03183    29 LLPLFGGTPVSPEKVKKAEENLEESLDLLENKFLKDKPFLAGDEISIADLSAICEIMQPEAAGYDVFEGRPKLAAWRKRV 108
                          90
                  ....*....|....*....
gi 2462492119 170 ElNIGSGLFREAHDRLMQL 188
Cdd:cd03183   109 K-EAGNPLFDEAHKVIYKL 126
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
29-143 7.03e-09

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 53.75  E-value: 7.03e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462492119  29 RASGHHHSKEYIDINPLRKLPSLKDGKFILSESR--QEY-------RDLAGQ-----------VALECSLLFPPLPNPGQ 88
Cdd:COG0625    34 LAKGEQKSPEFLALNPLGKVPVLVDDGLVLTESLaiLEYlaerypePPLLPAdpaararvrqwLAWADGDLHPALRNLLE 113
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2462492119  89 LLIPkitgeEVSAEKMEHAVEEVKNSLQLFEEYfLQDKMFITGNQISLADLVAVV 143
Cdd:COG0625   114 RLAP-----EKDPAAIARARAELARLLAVLEAR-LAGGPYLAGDRFSIADIALAP 162
GST_N_Theta cd03050
GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial ...
32-71 1.68e-06

GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DCM as sole carbon and energy sources. The presence of polymorphisms in human GSTT1-1 and its relationship to the onset of diseases including cancer is subject of many studies. Human GSTT2-2 exhibits a highly specific sulfatase activity, catalyzing the cleavage of sulfate ions from aralkyl sufate esters, but not from aryl or alkyl sulfate esters.


Pssm-ID: 239348 [Multi-domain]  Cd Length: 76  Bit Score: 44.16  E-value: 1.68e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 2462492119  32 GHHHSKEYIDINPLRKLPSLKDGKFILSESRQEYRDLAGQ 71
Cdd:cd03050    36 GEQLTPEFKKINPFGKVPAIVDGDFTLAESVAILRYLARK 75
PLN02395 PLN02395
glutathione S-transferase
32-139 1.97e-04

glutathione S-transferase


Pssm-ID: 166036 [Multi-domain]  Cd Length: 215  Bit Score: 41.00  E-value: 1.97e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462492119  32 GHHHSKEYIDINPLRKLPSLKDGKFILSESR-------QEYR----DLAGQ-----------VALECSLLFPPLPNPG-Q 88
Cdd:PLN02395   37 GEHKQPEYLALQPFGVVPVIVDGDYKIFESRaimryyaEKYRsqgpDLLGKtieergqveqwLDVEATSYHPPLLNLTlH 116
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2462492119  89 LLIPKITGEEVSAEKMEHAVEEVKNSLQLFEEYFLQDKmFITGNQISLADL 139
Cdd:PLN02395  117 ILFASKMGFPADEKVIKESEEKLAKVLDVYEARLSKSK-YLAGDFVSLADL 166
GST_C pfam00043
Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety ...
65-142 6.03e-04

Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety of targets including S-crystallin from squid, the eukaryotic elongation factor 1-gamma, the HSP26 family of stress-related proteins and auxin-regulated proteins in plants. Stringent starvation proteins in E. coli are also included in the alignment but are not known to have GST activity. The glutathione molecule binds in a cleft between N and C-terminal domains. The catalytically important residues are proposed to reside in the N-terminal domain. In plants, GSTs are encoded by a large gene family (48 GST genes in Arabidopsis) and can be divided into the phi, tau, theta, zeta, and lambda classes.


Pssm-ID: 459647 [Multi-domain]  Cd Length: 93  Bit Score: 37.65  E-value: 6.03e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462492119  65 YRDLAGQVALECsllfpplpnpgqlLIPKITGEEVSAEKmehAVEEVKNSLQLFEEYfLQDKMFITGNQISLADLVAV 142
Cdd:pfam00043   1 LMDLRMQIALLP-------------YVPPEEKKEPEVDE---ALEKVARVLSALEEV-LKGQTYLVGDKLTLADIALA 61
GST_N pfam02798
Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to ...
32-65 3.62e-03

Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to a variety of targets. Also included in the alignment, but not GSTs: S-crystallins from squid (similarity to GST previously noted); eukaryotic elongation factors 1-gamma (not known to have GST activity and similarity not previously recognized); HSP26 family of stress-related proteins including auxin-regulated proteins in plants and stringent starvation proteins in E. coli (not known to have GST activity and similarity not previously recognized). The glutathione molecule binds in a cleft between the N- and C-terminal domains - the catalytically important residues are proposed to reside in the N-terminal domain.


Pssm-ID: 460698 [Multi-domain]  Cd Length: 76  Bit Score: 34.97  E-value: 3.62e-03
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 2462492119  32 GHHHSKEYIDINPLRKLPSLKDGKFILSESR--QEY 65
Cdd:pfam02798  38 GPEKSPELLKLNPLGKVPALEDGGKKLTESRaiLEY 73
 
Name Accession Description Interval E-value
GST_C_Theta cd03183
C-terminal, alpha helical domain of Class Theta Glutathione S-transferases; Glutathione ...
90-188 2.33e-32

C-terminal, alpha helical domain of Class Theta Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DCM as sole carbon and energy sources. The presence of polymorphisms in human GSTT1-1 and its relationship to the onset of diseases including cancer is the subject of many studies. Human GSTT2-2 exhibits a highly specific sulfatase activity, catalyzing the cleavage of sulfate ions from aralkyl sufate esters, but not from the aryl or alkyl sulfate esters.


Pssm-ID: 198292 [Multi-domain]  Cd Length: 126  Bit Score: 113.46  E-value: 2.33e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462492119  90 LIPKITGEEVSAEKMEHAVEEVKNSLQLFEEYFLQDKMFITGNQISLADLVAVVEMMQPMAANYNVFLNSSKLAEWRMQV 169
Cdd:cd03183    29 LLPLFGGTPVSPEKVKKAEENLEESLDLLENKFLKDKPFLAGDEISIADLSAICEIMQPEAAGYDVFEGRPKLAAWRKRV 108
                          90
                  ....*....|....*....
gi 2462492119 170 ElNIGSGLFREAHDRLMQL 188
Cdd:cd03183   109 K-EAGNPLFDEAHKVIYKL 126
GstA COG0625
Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];
29-143 7.03e-09

Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440390 [Multi-domain]  Cd Length: 205  Bit Score: 53.75  E-value: 7.03e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462492119  29 RASGHHHSKEYIDINPLRKLPSLKDGKFILSESR--QEY-------RDLAGQ-----------VALECSLLFPPLPNPGQ 88
Cdd:COG0625    34 LAKGEQKSPEFLALNPLGKVPVLVDDGLVLTESLaiLEYlaerypePPLLPAdpaararvrqwLAWADGDLHPALRNLLE 113
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2462492119  89 LLIPkitgeEVSAEKMEHAVEEVKNSLQLFEEYfLQDKMFITGNQISLADLVAVV 143
Cdd:COG0625   114 RLAP-----EKDPAAIARARAELARLLAVLEAR-LAGGPYLAGDRFSIADIALAP 162
GST_N_Theta cd03050
GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial ...
32-71 1.68e-06

GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DCM as sole carbon and energy sources. The presence of polymorphisms in human GSTT1-1 and its relationship to the onset of diseases including cancer is subject of many studies. Human GSTT2-2 exhibits a highly specific sulfatase activity, catalyzing the cleavage of sulfate ions from aralkyl sufate esters, but not from aryl or alkyl sulfate esters.


Pssm-ID: 239348 [Multi-domain]  Cd Length: 76  Bit Score: 44.16  E-value: 1.68e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 2462492119  32 GHHHSKEYIDINPLRKLPSLKDGKFILSESRQEYRDLAGQ 71
Cdd:cd03050    36 GEQLTPEFKKINPFGKVPAIVDGDFTLAESVAILRYLARK 75
GST_C_family cd00299
C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione ...
88-166 1.17e-04

C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Based on sequence similarity, different classes of GSTs have been identified, which display varying tissue distribution, substrate specificities and additional specific activities. In humans, GSTs display polymorphisms which may influence individual susceptibility to diseases such as cancer, arthritis, allergy and sclerosis. Some GST family members with non-GST functions include glutaredoxin 2, the CLIC subfamily of anion channels, prion protein Ure2p, crystallins, metaxins, stringent starvation protein A, and aminoacyl-tRNA synthetases.


Pssm-ID: 198286 [Multi-domain]  Cd Length: 100  Bit Score: 39.79  E-value: 1.17e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462492119  88 QLLIPKITGEEVSAEKMEHAVEEVKNSLQLFEEYfLQDKMFITGNQISLAD--LVAVVEMMQPMAANYNVFLNSSKLAEW 165
Cdd:cd00299    18 RLLYLEKVPLPKDEAAVEAAREELPALLAALEQL-LAGRPYLAGDQFSLADvaLAPVLARLEALGPYYDLLDEYPRLKAW 96

                  .
gi 2462492119 166 R 166
Cdd:cd00299    97 Y 97
PLN02395 PLN02395
glutathione S-transferase
32-139 1.97e-04

glutathione S-transferase


Pssm-ID: 166036 [Multi-domain]  Cd Length: 215  Bit Score: 41.00  E-value: 1.97e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462492119  32 GHHHSKEYIDINPLRKLPSLKDGKFILSESR-------QEYR----DLAGQ-----------VALECSLLFPPLPNPG-Q 88
Cdd:PLN02395   37 GEHKQPEYLALQPFGVVPVIVDGDYKIFESRaimryyaEKYRsqgpDLLGKtieergqveqwLDVEATSYHPPLLNLTlH 116
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2462492119  89 LLIPKITGEEVSAEKMEHAVEEVKNSLQLFEEYFLQDKmFITGNQISLADL 139
Cdd:PLN02395  117 ILFASKMGFPADEKVIKESEEKLAKVLDVYEARLSKSK-YLAGDFVSLADL 166
GST_C pfam00043
Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety ...
65-142 6.03e-04

Glutathione S-transferase, C-terminal domain; GST conjugates reduced glutathione to a variety of targets including S-crystallin from squid, the eukaryotic elongation factor 1-gamma, the HSP26 family of stress-related proteins and auxin-regulated proteins in plants. Stringent starvation proteins in E. coli are also included in the alignment but are not known to have GST activity. The glutathione molecule binds in a cleft between N and C-terminal domains. The catalytically important residues are proposed to reside in the N-terminal domain. In plants, GSTs are encoded by a large gene family (48 GST genes in Arabidopsis) and can be divided into the phi, tau, theta, zeta, and lambda classes.


Pssm-ID: 459647 [Multi-domain]  Cd Length: 93  Bit Score: 37.65  E-value: 6.03e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462492119  65 YRDLAGQVALECsllfpplpnpgqlLIPKITGEEVSAEKmehAVEEVKNSLQLFEEYfLQDKMFITGNQISLADLVAV 142
Cdd:pfam00043   1 LMDLRMQIALLP-------------YVPPEEKKEPEVDE---ALEKVARVLSALEEV-LKGQTYLVGDKLTLADIALA 61
GST_C_EF1Bgamma_like cd03181
Glutathione S-transferase C-terminal-like, alpha helical domain of the Gamma subunit of ...
105-143 6.46e-04

Glutathione S-transferase C-terminal-like, alpha helical domain of the Gamma subunit of Elongation Factor 1B and similar proteins; Glutathione S-transferase (GST) C-terminal domain family, Gamma subunit of Elongation Factor 1B (EF1Bgamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in protein biosynthesis, EF1Bgamma may also display other functions. The recombinant rice protein has been shown to possess GSH conjugating activity. The yeast EF1Bgamma binds to membranes in a calcium dependent manner and is also part of a complex that binds to the msrA (methionine sulfoxide reductase) promoter suggesting a function in the regulation of its gene expression. Also included in this subfamily is the GST_C-like domain at the N-terminus of human valyl-tRNA synthetase (ValRS) and its homologs. Metazoan ValRS forms a stable complex with Elongation Factor-1H (EF-1H), and together, they catalyze consecutive steps in protein biosynthesis, tRNA aminoacylation and its transfer to EF.


Pssm-ID: 198290 [Multi-domain]  Cd Length: 123  Bit Score: 38.31  E-value: 6.46e-04
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 2462492119 105 EHAVEEVKNSLQLFEEYfLQDKMFITGNQISLADLVAVV 143
Cdd:cd03181    39 DKAKEDLKRALGVLEEH-LLTRTYLVGERITLADIFVAS 76
GST_N_Zeta cd03042
GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular ...
32-61 2.02e-03

GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.


Pssm-ID: 239340 [Multi-domain]  Cd Length: 73  Bit Score: 35.62  E-value: 2.02e-03
                          10        20        30
                  ....*....|....*....|....*....|
gi 2462492119  32 GHHHSKEYIDINPLRKLPSLKDGKFILSES 61
Cdd:cd03042    36 GEQLSPAYRALNPQGLVPTLVIDGLVLTQS 65
GST_N_Phi cd03053
GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related ...
32-62 2.31e-03

GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including transport of flavonoid pigments to the vacuole, shoot regeneration and GSH peroxidase activity.


Pssm-ID: 239351 [Multi-domain]  Cd Length: 76  Bit Score: 35.70  E-value: 2.31e-03
                          10        20        30
                  ....*....|....*....|....*....|.
gi 2462492119  32 GHHHSKEYIDINPLRKLPSLKDGKFILSESR 62
Cdd:cd03053    37 GEHKSPEHLARNPFGQIPALEDGDLKLFESR 67
GST_N_GTT1_like cd03046
GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly ...
29-61 3.28e-03

GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pombe GST-III is implicated in the detoxification of various metals.


Pssm-ID: 239344 [Multi-domain]  Cd Length: 76  Bit Score: 35.17  E-value: 3.28e-03
                          10        20        30
                  ....*....|....*....|....*....|...
gi 2462492119  29 RASGHHHSKEYIDINPLRKLPSLKDGKFILSES 61
Cdd:cd03046    32 RGPGEQAPPEYLAINPLGKVPVLVDGDLVLTES 64
GST_N pfam02798
Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to ...
32-65 3.62e-03

Glutathione S-transferase, N-terminal domain; Function: conjugation of reduced glutathione to a variety of targets. Also included in the alignment, but not GSTs: S-crystallins from squid (similarity to GST previously noted); eukaryotic elongation factors 1-gamma (not known to have GST activity and similarity not previously recognized); HSP26 family of stress-related proteins including auxin-regulated proteins in plants and stringent starvation proteins in E. coli (not known to have GST activity and similarity not previously recognized). The glutathione molecule binds in a cleft between the N- and C-terminal domains - the catalytically important residues are proposed to reside in the N-terminal domain.


Pssm-ID: 460698 [Multi-domain]  Cd Length: 76  Bit Score: 34.97  E-value: 3.62e-03
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 2462492119  32 GHHHSKEYIDINPLRKLPSLKDGKFILSESR--QEY 65
Cdd:pfam02798  38 GPEKSPELLKLNPLGKVPALEDGGKKLTESRaiLEY 73
GST_C_Delta_Epsilon cd03177
C-terminal, alpha helical domain of Class Delta and Epsilon Glutathione S-transferases; ...
96-143 8.70e-03

C-terminal, alpha helical domain of Class Delta and Epsilon Glutathione S-transferases; Glutathione S-transferase (GST) C-terminal domain family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.


Pssm-ID: 198287 [Multi-domain]  Cd Length: 117  Bit Score: 34.82  E-value: 8.70e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 2462492119  96 GEEVSAEKMEHaveeVKNSLQLFEEyFLQDKMFITGNQISLADLVAVV 143
Cdd:cd03177    32 GAEPPEEKLDK----LEEALEFLET-FLEGSDYVAGDQLTIADLSLVA 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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