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Conserved domains on  [gi|2462609645|ref|XP_054211973|]
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NHS-like protein 1 isoform X3 [Homo sapiens]

Protein Classification

LCP family protein( domain architecture ID 13867071)

LytR-CpsA-Psr (LCP) family protein is implicated in the attachment of anionic polymers to cell wall peptidoglycan in bacteria

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
NHS pfam15273
NHS-like; This family of proteins includes Nance-Horan syndrome protein (NHS).
320-955 0e+00

NHS-like; This family of proteins includes Nance-Horan syndrome protein (NHS).


:

Pssm-ID: 464606  Cd Length: 654  Bit Score: 757.80  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  320 GQRSETRDSSCQTEDVKVVPPSMRRIRAQKGQGIAAQMGHFSGSSGNMSVLSDSAGIVFPSRLDSDAGFHSLPRSGARAN 399
Cdd:pfam15273    1 GRRSETRDSSCQTEDVKVVPPSRRRIRAQKGQGIAAQMSHSSSSSGNMSVLSDSADIMFSSRLNGDLRFRSLPREGARES 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  400 IQSLEPRLGALGPAGDMNGTFLYQRGHPQADENLGHLGGASGTGTLLRPKSQELRHFESENImSPACVVSPHATYSTSII 479
Cdd:pfam15273   81 LSPLETESFLRGPAERAGTTLPKQSEESQDDQAVHELQGSPRHGLLERPRSQEPRKFADESS-SSPACVSPHAYYSTSII 159
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  480 PNATLSSSSEVIAIPTAQSAGQRESKSSGSSharikSRDHLISRHAVKGDPQSPGRHWNEGHATILSQDLDPHSPGE-PA 558
Cdd:pfam15273  160 GNATISSSSDTISIHTVSTGGVLDSRMDSTN-----DNKAASSRASGKDDHQSSSGNWSGSSSTCPSQTSETIPPASsPP 234
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  559 LLSLCDSAVPLNAPANRENGSQAMPYNCRNNLAFPAHPQDVDGKSESSYSGGGGHSSSEPWEYKSSGNGRASPLKPHLAT 638
Cdd:pfam15273  235 LSSHCDSELSLNTPPHEENDSSGFYYRCHRAASFSSHSQDVDDDSESSYSEGRPASSEEEWEYSAEGNETASPKKPRTAT 314
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  639 PGYSTPTSNMSSCSLDQTSNKEDAGSLYSEDHDGYCASVHTDSGHGSGNLCNSSDGFGNPRHSVINVFVGRAQKNQGDRS 718
Cdd:pfam15273  315 PGLSTPSSNSSSTSEKTPSEKADTSSLYSVDHDGYYTSMHFDSGLKSGKSYNNYAGFGPDRGSSNNVFDGEAQKNQDDSS 394
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  719 NYQDKSLSRNISLKKAKKPPLPPSRTDSLRRIPKKSSQCNGQVLNESLIATLQHSLQLSLPGKSGSSPSQSPCSDLEEPW 798
Cdd:pfam15273  395 GHSDKSLRRSISLKKAKKPPPPPKRTSSLRRPPKKEPKINGQVLLELLIASLQMSLQLNLCGKGGSSESSSLCSDYEEPW 474
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  799 LPRSRSQSTVSAGSSMTSATTPNVYSLCGATPSQSDTSSVKSEYTDPWGYYIDYTGMQEDPGNPAGGCSTSSGVPTGNGP 878
Cdd:pfam15273  475 LRRSRSQSTVSSSSSMSSTTDPNYYSLCVVTPSQSDTSSVKSEYADLWLYYIDLKGASDDPYRSLSNSSTATGTTVIECI 554
                          570       580       590       600       610       620       630
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462609645  879 VRHVQEGSRATMPQVPGGSVKPKIMSPEKSHRVISPSSGYSSQSNTPTALTPVPVFLKSVSPANGKGKPKPKVPERK 955
Cdd:pfam15273  555 KSPESSGSRATTPSVPGVEVKPKLSSPEKLARVTSPSSGYSSQSNTPTSLTPVPFFLGPLSPANGKRKKKPKVPERK 631
PHA03307 super family cl33723
transcriptional regulator ICP4; Provisional
1178-1579 5.07e-08

transcriptional regulator ICP4; Provisional


The actual alignment was detected with superfamily member PHA03307:

Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 58.26  E-value: 5.07e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1178 PSAFLKSRNSTNEMESESQPASVTSSLPTPAKSSSQGDHGSAAERGGPVSRSPGAPSAGEAEARPSPSTTPLPDSSPSRK 1257
Cdd:PHA03307    54 TVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPD 133
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1258 pppiskkpklflvVPPPQKDFAVEPAENVSEALRAVPSPTTGEEGSVHSREAkeSSAAQAGSHATHPGTSVLE------- 1330
Cdd:PHA03307   134 -------------LSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQA--ALPLSSPEETARAPSSPPAepppstp 198
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1331 -GGAAGSMSPSRVEANVPMVQPDVSPAPKQEEPAENSADTGGDGESCLSQQDGAAGVPETNAAGSSSEACDFLKEDGNDE 1409
Cdd:PHA03307   199 pAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGP 278
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1410 VMTPSRPRTTEdlfaaihrskrkvlGRRDSDDDHSRNHSPSPPVTPTGAAPSLASPKQVGSIQrSIRKSSTSSDNFKALL 1489
Cdd:PHA03307   279 SSRPGPASSSS--------------SPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSS-STSSSSESSRGAAVSP 343
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1490 LKKGSRSDTSARMSAAemlknTDPRFQRSRSEPSPDAPESPSSCSPSKNRRAQeeWAKNEGLMPRSLSFSGPRyGRSRTP 1569
Cdd:PHA03307   344 GPSPSRSPSPSRPPPP-----ADPSSPRKRPRPSRAPSSPAASAGRPTRRRAR--AAVAGRARRRDATGRFPA-GRPRPS 415
                          410
                   ....*....|
gi 2462609645 1570 PSAASSRYSM 1579
Cdd:PHA03307   416 PLDAGAASGA 425
 
Name Accession Description Interval E-value
NHS pfam15273
NHS-like; This family of proteins includes Nance-Horan syndrome protein (NHS).
320-955 0e+00

NHS-like; This family of proteins includes Nance-Horan syndrome protein (NHS).


Pssm-ID: 464606  Cd Length: 654  Bit Score: 757.80  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  320 GQRSETRDSSCQTEDVKVVPPSMRRIRAQKGQGIAAQMGHFSGSSGNMSVLSDSAGIVFPSRLDSDAGFHSLPRSGARAN 399
Cdd:pfam15273    1 GRRSETRDSSCQTEDVKVVPPSRRRIRAQKGQGIAAQMSHSSSSSGNMSVLSDSADIMFSSRLNGDLRFRSLPREGARES 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  400 IQSLEPRLGALGPAGDMNGTFLYQRGHPQADENLGHLGGASGTGTLLRPKSQELRHFESENImSPACVVSPHATYSTSII 479
Cdd:pfam15273   81 LSPLETESFLRGPAERAGTTLPKQSEESQDDQAVHELQGSPRHGLLERPRSQEPRKFADESS-SSPACVSPHAYYSTSII 159
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  480 PNATLSSSSEVIAIPTAQSAGQRESKSSGSSharikSRDHLISRHAVKGDPQSPGRHWNEGHATILSQDLDPHSPGE-PA 558
Cdd:pfam15273  160 GNATISSSSDTISIHTVSTGGVLDSRMDSTN-----DNKAASSRASGKDDHQSSSGNWSGSSSTCPSQTSETIPPASsPP 234
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  559 LLSLCDSAVPLNAPANRENGSQAMPYNCRNNLAFPAHPQDVDGKSESSYSGGGGHSSSEPWEYKSSGNGRASPLKPHLAT 638
Cdd:pfam15273  235 LSSHCDSELSLNTPPHEENDSSGFYYRCHRAASFSSHSQDVDDDSESSYSEGRPASSEEEWEYSAEGNETASPKKPRTAT 314
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  639 PGYSTPTSNMSSCSLDQTSNKEDAGSLYSEDHDGYCASVHTDSGHGSGNLCNSSDGFGNPRHSVINVFVGRAQKNQGDRS 718
Cdd:pfam15273  315 PGLSTPSSNSSSTSEKTPSEKADTSSLYSVDHDGYYTSMHFDSGLKSGKSYNNYAGFGPDRGSSNNVFDGEAQKNQDDSS 394
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  719 NYQDKSLSRNISLKKAKKPPLPPSRTDSLRRIPKKSSQCNGQVLNESLIATLQHSLQLSLPGKSGSSPSQSPCSDLEEPW 798
Cdd:pfam15273  395 GHSDKSLRRSISLKKAKKPPPPPKRTSSLRRPPKKEPKINGQVLLELLIASLQMSLQLNLCGKGGSSESSSLCSDYEEPW 474
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  799 LPRSRSQSTVSAGSSMTSATTPNVYSLCGATPSQSDTSSVKSEYTDPWGYYIDYTGMQEDPGNPAGGCSTSSGVPTGNGP 878
Cdd:pfam15273  475 LRRSRSQSTVSSSSSMSSTTDPNYYSLCVVTPSQSDTSSVKSEYADLWLYYIDLKGASDDPYRSLSNSSTATGTTVIECI 554
                          570       580       590       600       610       620       630
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462609645  879 VRHVQEGSRATMPQVPGGSVKPKIMSPEKSHRVISPSSGYSSQSNTPTALTPVPVFLKSVSPANGKGKPKPKVPERK 955
Cdd:pfam15273  555 KSPESSGSRATTPSVPGVEVKPKLSSPEKLARVTSPSSGYSSQSNTPTSLTPVPFFLGPLSPANGKRKKKPKVPERK 631
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
1178-1579 5.07e-08

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 58.26  E-value: 5.07e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1178 PSAFLKSRNSTNEMESESQPASVTSSLPTPAKSSSQGDHGSAAERGGPVSRSPGAPSAGEAEARPSPSTTPLPDSSPSRK 1257
Cdd:PHA03307    54 TVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPD 133
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1258 pppiskkpklflvVPPPQKDFAVEPAENVSEALRAVPSPTTGEEGSVHSREAkeSSAAQAGSHATHPGTSVLE------- 1330
Cdd:PHA03307   134 -------------LSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQA--ALPLSSPEETARAPSSPPAepppstp 198
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1331 -GGAAGSMSPSRVEANVPMVQPDVSPAPKQEEPAENSADTGGDGESCLSQQDGAAGVPETNAAGSSSEACDFLKEDGNDE 1409
Cdd:PHA03307   199 pAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGP 278
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1410 VMTPSRPRTTEdlfaaihrskrkvlGRRDSDDDHSRNHSPSPPVTPTGAAPSLASPKQVGSIQrSIRKSSTSSDNFKALL 1489
Cdd:PHA03307   279 SSRPGPASSSS--------------SPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSS-STSSSSESSRGAAVSP 343
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1490 LKKGSRSDTSARMSAAemlknTDPRFQRSRSEPSPDAPESPSSCSPSKNRRAQeeWAKNEGLMPRSLSFSGPRyGRSRTP 1569
Cdd:PHA03307   344 GPSPSRSPSPSRPPPP-----ADPSSPRKRPRPSRAPSSPAASAGRPTRRRAR--AAVAGRARRRDATGRFPA-GRPRPS 415
                          410
                   ....*....|
gi 2462609645 1570 PSAASSRYSM 1579
Cdd:PHA03307   416 PLDAGAASGA 425
 
Name Accession Description Interval E-value
NHS pfam15273
NHS-like; This family of proteins includes Nance-Horan syndrome protein (NHS).
320-955 0e+00

NHS-like; This family of proteins includes Nance-Horan syndrome protein (NHS).


Pssm-ID: 464606  Cd Length: 654  Bit Score: 757.80  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  320 GQRSETRDSSCQTEDVKVVPPSMRRIRAQKGQGIAAQMGHFSGSSGNMSVLSDSAGIVFPSRLDSDAGFHSLPRSGARAN 399
Cdd:pfam15273    1 GRRSETRDSSCQTEDVKVVPPSRRRIRAQKGQGIAAQMSHSSSSSGNMSVLSDSADIMFSSRLNGDLRFRSLPREGARES 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  400 IQSLEPRLGALGPAGDMNGTFLYQRGHPQADENLGHLGGASGTGTLLRPKSQELRHFESENImSPACVVSPHATYSTSII 479
Cdd:pfam15273   81 LSPLETESFLRGPAERAGTTLPKQSEESQDDQAVHELQGSPRHGLLERPRSQEPRKFADESS-SSPACVSPHAYYSTSII 159
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  480 PNATLSSSSEVIAIPTAQSAGQRESKSSGSSharikSRDHLISRHAVKGDPQSPGRHWNEGHATILSQDLDPHSPGE-PA 558
Cdd:pfam15273  160 GNATISSSSDTISIHTVSTGGVLDSRMDSTN-----DNKAASSRASGKDDHQSSSGNWSGSSSTCPSQTSETIPPASsPP 234
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  559 LLSLCDSAVPLNAPANRENGSQAMPYNCRNNLAFPAHPQDVDGKSESSYSGGGGHSSSEPWEYKSSGNGRASPLKPHLAT 638
Cdd:pfam15273  235 LSSHCDSELSLNTPPHEENDSSGFYYRCHRAASFSSHSQDVDDDSESSYSEGRPASSEEEWEYSAEGNETASPKKPRTAT 314
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  639 PGYSTPTSNMSSCSLDQTSNKEDAGSLYSEDHDGYCASVHTDSGHGSGNLCNSSDGFGNPRHSVINVFVGRAQKNQGDRS 718
Cdd:pfam15273  315 PGLSTPSSNSSSTSEKTPSEKADTSSLYSVDHDGYYTSMHFDSGLKSGKSYNNYAGFGPDRGSSNNVFDGEAQKNQDDSS 394
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  719 NYQDKSLSRNISLKKAKKPPLPPSRTDSLRRIPKKSSQCNGQVLNESLIATLQHSLQLSLPGKSGSSPSQSPCSDLEEPW 798
Cdd:pfam15273  395 GHSDKSLRRSISLKKAKKPPPPPKRTSSLRRPPKKEPKINGQVLLELLIASLQMSLQLNLCGKGGSSESSSLCSDYEEPW 474
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645  799 LPRSRSQSTVSAGSSMTSATTPNVYSLCGATPSQSDTSSVKSEYTDPWGYYIDYTGMQEDPGNPAGGCSTSSGVPTGNGP 878
Cdd:pfam15273  475 LRRSRSQSTVSSSSSMSSTTDPNYYSLCVVTPSQSDTSSVKSEYADLWLYYIDLKGASDDPYRSLSNSSTATGTTVIECI 554
                          570       580       590       600       610       620       630
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462609645  879 VRHVQEGSRATMPQVPGGSVKPKIMSPEKSHRVISPSSGYSSQSNTPTALTPVPVFLKSVSPANGKGKPKPKVPERK 955
Cdd:pfam15273  555 KSPESSGSRATTPSVPGVEVKPKLSSPEKLARVTSPSSGYSSQSNTPTSLTPVPFFLGPLSPANGKRKKKPKVPERK 631
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
1178-1579 5.07e-08

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 58.26  E-value: 5.07e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1178 PSAFLKSRNSTNEMESESQPASVTSSLPTPAKSSSQGDHGSAAERGGPVSRSPGAPSAGEAEARPSPSTTPLPDSSPSRK 1257
Cdd:PHA03307    54 TVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPD 133
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1258 pppiskkpklflvVPPPQKDFAVEPAENVSEALRAVPSPTTGEEGSVHSREAkeSSAAQAGSHATHPGTSVLE------- 1330
Cdd:PHA03307   134 -------------LSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQA--ALPLSSPEETARAPSSPPAepppstp 198
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1331 -GGAAGSMSPSRVEANVPMVQPDVSPAPKQEEPAENSADTGGDGESCLSQQDGAAGVPETNAAGSSSEACDFLKEDGNDE 1409
Cdd:PHA03307   199 pAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGP 278
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1410 VMTPSRPRTTEdlfaaihrskrkvlGRRDSDDDHSRNHSPSPPVTPTGAAPSLASPKQVGSIQrSIRKSSTSSDNFKALL 1489
Cdd:PHA03307   279 SSRPGPASSSS--------------SPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSS-STSSSSESSRGAAVSP 343
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1490 LKKGSRSDTSARMSAAemlknTDPRFQRSRSEPSPDAPESPSSCSPSKNRRAQeeWAKNEGLMPRSLSFSGPRyGRSRTP 1569
Cdd:PHA03307   344 GPSPSRSPSPSRPPPP-----ADPSSPRKRPRPSRAPSSPAASAGRPTRRRAR--AAVAGRARRRDATGRFPA-GRPRPS 415
                          410
                   ....*....|
gi 2462609645 1570 PSAASSRYSM 1579
Cdd:PHA03307   416 PLDAGAASGA 425
PHA03247 PHA03247
large tegument protein UL36; Provisional
1052-1551 2.87e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 49.17  E-value: 2.87e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1052 PDWCLSPPRPALSPILPDSPVSLPLPPPLLPSSEPPPAPPLDPKFMKDTR----PPFTNSGQPESSRGSLRPPSTKE-ET 1126
Cdd:PHA03247  2564 PDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPpsplPPDTHAPDPPPPSPSPAANEPDPhPP 2643
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1127 SRPPMPLITTEALQMVQLRPVRKNSGAEAAQLSERTAQEQRTPVAPQYHLKPSAFlkSRNSTNEMESESQPASVTSSLPT 1206
Cdd:PHA03247  2644 PTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSL--ADPPPPPPTPEPAPHALVSATPL 2721
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1207 PAKSSSQGDHGSAAERGGPVSRSPGAPSAGEAEARP-SPSTTPLPDSS-PSRKPppiskkpklflvVPPPQKDFAVEPAE 1284
Cdd:PHA03247  2722 PPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPaRPPTTAGPPAPaPPAAP------------AAGPPRRLTRPAVA 2789
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1285 NVSEALRAVPSPttgeegsvhsREAKESSAAQAGSHATHPGTSVLEGGAAGSMSPsrveanVPMVQPDVSPAPKQEEPAE 1364
Cdd:PHA03247  2790 SLSESRESLPSP----------WDPADPPAAVLAPAAALPPAASPAGPLPPPTSA------QPTAPPPPPGPPPPSLPLG 2853
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1365 NSADTGGDgesclSQQDGAAGVPETNAAgssseacdflkedgndevmTPSRPRTTEDLFAAIHRSKRKVlgrRDSDDDHS 1444
Cdd:PHA03247  2854 GSVAPGGD-----VRRRPPSRSPAAKPA-------------------APARPPVRRLARPAVSRSTESF---ALPPDQPE 2906
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462609645 1445 RNHSPSPPVTPTGAAPSLASPKQVGSIQRSIRKSSTSSDNFKALLLKKGSRSDTSARMSAAEMLKNTDPRFQRSRSEPSP 1524
Cdd:PHA03247  2907 RPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSR 2986
                          490       500
                   ....*....|....*....|....*..
gi 2462609645 1525 DAPESPSSCSPSKNRRAQEEWAKNEGL 1551
Cdd:PHA03247  2987 EAPASSTPPLTGHSLSRVSSWASSLAL 3013
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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