NCBI Conserved Domain Search

Conserved domains on [gi|2468437868|ref|XP_054512690|]

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proteoglycan 4 isoform X3 [Pan troglodytes]

Protein Classification

SO and HX domain-containing protein( domain architecture ID 10640906)

SO and HX domain-containing protein

Graphical summary

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List of domain hits

Name

Accession

Description

Interval

E-value

cd00094

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1180-1440

1.20e-44

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat.

Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 160.17 E-value: 1.20e-44

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868 1180 TNICNGKPVDGLTTLRnGTLVAFRGHYFWMLSPFSPPSPARRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1258
Cdd:cd00094      1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868 1259 DIKDAGYPKPIFK-GFGGLTGQIVAALSTAKyknwPESVYFFKRGGSIQQYIYKQEPVQKCPgrrpalnypvygettqvr 1337
Cdd:cd00094     79 KNLEPGYPKPISDlGFPPTVKQIDAALRWPD----NGKTYFFKGDKYWRYDEKTQKMDPGYP------------------ 136

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868 1338 rRRFERAigpsqthtirihysparlayqdkgvlhnevkvsilWRGLPNVVTSAislpnIRKPDGYdYYAFSKDQYYNIDV 1417
Cdd:cd00094    137 -KLIETD-----------------------------------FPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFDP 174

                          250       260
                   ....*....|....*....|...
gi 2468437868 1418 PSRTARAITTRSGqtlSKVWYNC 1440
Cdd:cd00094    175 RSKEVRVGYPLKI---SSDWLGC 194

PHA03247 super family

cl33720

large tegument protein UL36; Provisional

346-864

2.72e-28

large tegument protein UL36; Provisional

The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 124.67 E-value: 2.72e-28

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  346 PAPTTPKEPAPTTTKSAPttPMEPAPTtPKEPAPTTTKSAPTTPMEPA-PTTPKKPaPTTPKEPAPTTPKEPAPTTPKEP 424
Cdd:PHA03247  2552 PPPLPPAAPPAAPDRSVP--PPRPAPR-PSEPAVTSRARRPDAPPQSArPRAPVDD-RGDPRGPAPPSPLPPDTHAPDPP 2627

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  425 APTttKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPT 504
Cdd:PHA03247  2628 PPS--PSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPP 2705

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  505 TPKEPAPTA-----PKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTttkePAPTTPKEPAPTTPKKPAPTTPKE 579
Cdd:PHA03247  2706 PTPEPAPHAlvsatPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARP----ARPPTTAGPPAPAPPAAPAAGPPR 2781

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  580 TAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKlAPTTPEEPAPTTPEEPAPTtPEEPAPTTLEE 659
Cdd:PHA03247  2782 RLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLP-PPTSAQPTAPPPPPGPPPP-SLPLGGSVAPG 2859

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  660 PTPTTPEEPAPTTPKTAAPNTPK-----EPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTT 734
Cdd:PHA03247  2860 GDVRRRPPSRSPAAKPAAPARPPvrrlaRPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRP 2939

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  735 KEPTSTTSDKPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTPkGTAPTTPKGTAPTTPKGT--APTTPKETAST 812
Cdd:PHA03247  2940 QPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSRE-APASSTPPLTGHSLSRVSswASSLALHEETD 3018

                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  813 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKKPTSTTSDKPAPTIPKETAP 864
Cdd:PHA03247  3019 PPPVSLKQTLWPPDDTEDSDADSLFDSDSERSDLEALDPLPPEPHDPFAHEP 3070

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

66-108

1.18e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 83.19 E-value: 1.18e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 2468437868    66 AELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVH 108
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

26-68

9.12e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 80.88 E-value: 9.12e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 2468437868    26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

kgd super family

cl39092

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

295-386

1.91e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

The actual alignment was detected with superfamily member PRK12270:

Pssm-ID: 476867 [Multi-domain] Cd Length: 1228 Bit Score: 46.04 E-value: 1.91e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  295 TTKGPALTTPKEPTPTTPKEPASTTPKEPTATTiKSAPTTPKEPAPTTPKEPAPTTPKEPAPtttksAPTTPMEPAPTTP 374
Cdd:PRK12270    34 ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKA-PAAPAPAPPAAAAPAAPPKPAAAAAAAA-----APAAPPAAAAAAA 107

                           90
                   ....*....|..
gi 2468437868  375 KEPAPTTTKSAP 386
Cdd:PRK12270   108 PAAAAVEDEVTP 119

Name

Accession

Description

Interval

E-value

cd00094

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1180-1440

1.20e-44

Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 160.17 E-value: 1.20e-44

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868 1180 TNICNGKPVDGLTTLRnGTLVAFRGHYFWMLSPFSPPSPARRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1258
Cdd:cd00094      1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868 1259 DIKDAGYPKPIFK-GFGGLTGQIVAALSTAKyknwPESVYFFKRGGSIQQYIYKQEPVQKCPgrrpalnypvygettqvr 1337
Cdd:cd00094     79 KNLEPGYPKPISDlGFPPTVKQIDAALRWPD----NGKTYFFKGDKYWRYDEKTQKMDPGYP------------------ 136

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868 1338 rRRFERAigpsqthtirihysparlayqdkgvlhnevkvsilWRGLPNVVTSAislpnIRKPDGYdYYAFSKDQYYNIDV 1417
Cdd:cd00094    137 -KLIETD-----------------------------------FPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFDP 174

                          250       260
                   ....*....|....*....|...
gi 2468437868 1418 PSRTARAITTRSGqtlSKVWYNC 1440
Cdd:cd00094    175 RSKEVRVGYPLKI---SSDWLGC 194

PHA03247

large tegument protein UL36; Provisional

346-864

2.72e-28

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 124.67 E-value: 2.72e-28

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  346 PAPTTPKEPAPTTTKSAPttPMEPAPTtPKEPAPTTTKSAPTTPMEPA-PTTPKKPaPTTPKEPAPTTPKEPAPTTPKEP 424
Cdd:PHA03247  2552 PPPLPPAAPPAAPDRSVP--PPRPAPR-PSEPAVTSRARRPDAPPQSArPRAPVDD-RGDPRGPAPPSPLPPDTHAPDPP 2627

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  425 APTttKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPT 504
Cdd:PHA03247  2628 PPS--PSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPP 2705

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  505 TPKEPAPTA-----PKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTttkePAPTTPKEPAPTTPKKPAPTTPKE 579
Cdd:PHA03247  2706 PTPEPAPHAlvsatPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARP----ARPPTTAGPPAPAPPAAPAAGPPR 2781

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  580 TAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKlAPTTPEEPAPTTPEEPAPTtPEEPAPTTLEE 659
Cdd:PHA03247  2782 RLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLP-PPTSAQPTAPPPPPGPPPP-SLPLGGSVAPG 2859

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  660 PTPTTPEEPAPTTPKTAAPNTPK-----EPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTT 734
Cdd:PHA03247  2860 GDVRRRPPSRSPAAKPAAPARPPvrrlaRPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRP 2939

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  735 KEPTSTTSDKPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTPkGTAPTTPKGTAPTTPKGT--APTTPKETAST 812
Cdd:PHA03247  2940 QPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSRE-APASSTPPLTGHSLSRVSswASSLALHEETD 3018

                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  813 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKKPTSTTSDKPAPTIPKETAP 864
Cdd:PHA03247  3019 PPPVSLKQTLWPPDDTEDSDADSLFDSDSERSDLEALDPLPPEPHDPFAHEP 3070

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

66-108

1.18e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 83.19 E-value: 1.18e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 2468437868    66 AELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVH 108
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

26-68

9.12e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 80.88 E-value: 9.12e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 2468437868    26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

Somatomedin_B

pfam01033

Somatomedin B domain;

69-106

3.98e-18

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 78.88 E-value: 3.98e-18

                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 2468437868   69 SCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAE 106
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLG 39

Somatomedin_B

pfam01033

Somatomedin B domain;

29-67

1.99e-16

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 74.26 E-value: 1.99e-16

                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 2468437868   29 SCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAE 67
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLGE 40

smart00120

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1232-1276

9.89e-11

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs).

Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 58.02 E-value: 9.89e-11

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 2468437868  1232 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPIFKGFGGL 1276
Cdd:smart00120    1 IDAAFELRD--GKTYFFKGDKYWRFDPKRVDPGYPKLISSFFPGL 43

Not5

COG5665

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

346-648

5.33e-09

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 60.83 E-value: 5.33e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  346 PAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTtpmepaPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPA 425
Cdd:COG5665    245 TPPATPATEEKSSQQPKSQPTSPSGGTTPPSTNQLTTSNTPT------STAKAQPQPPTKKQPAKEPPSDTASGNPSAPS 318

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  426 PTTtkepAPTTPkEPAPTTTKSAPTTPKEPAPTTPKKpVPTTPKEPA-PTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPT 504
Cdd:COG5665    319 VLI----NSDSP-TSEDPATASVPTTEETTAFTTPSS-VPSTPAEKDtPATDLATPVSPTPPETSVDKKVSPDSATSSTK 392

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  505 TPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTT 584
Cdd:COG5665    393 SEKEGGTASSPMPPNIAIGAKDDVDATDPSQEAKEYTKNAPMTPEADSAPESSVRTEASPSAGSDLEPENTTLRDPAPNA 472

                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2468437868  585 PKEPAPTTTKKPAPTTPKEPAPTTPkeTAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTT 648
Cdd:COG5665    473 IPPPEDPSTIGRLSSGDKLANETGP--PVIRRDSTPSSTADQSIVGVLAFGLDQRTQAEISVEA 534

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

386-748

8.62e-09

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 60.17 E-value: 8.62e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  386 PTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPT--TPKEPAPTTPKKP 463
Cdd:pfam03154  172 PVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTlhPQRLPSPHPPLQP 251

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  464 VPttpkePAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPT 543
Cdd:pfam03154  252 MT-----QPPPPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIH 326

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  544 TPKEPSPTTTKEPAPTTPKEPAPTT------------PKKPAPTTPKETAPTTPKEPAPTTT--KKPAPTTPKEPAPTTP 609
Cdd:pfam03154  327 TPPSQSQLQSQQPPREQPLPPAPLSmphikpppttpiPQLPNPQSHKHPPHLSGPSPFQMNSnlPPPPALKPLSSLSTHH 406

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  610 KETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTP 689
Cdd:pfam03154  407 PPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPPTSTS 486

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  690 KEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPT 748
Cdd:pfam03154  487 SAMPGIQPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPPPPRSPSPEPT 545

Hemopexin

pfam00045

Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1232-1274

1.09e-08

Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs).

Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 52.18 E-value: 1.09e-08

                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 2468437868 1232 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPI--FKGFG 1274
Cdd:pfam00045    1 IDAAFEDRD--GKTYFFKGRKYWRFDPQRVEPGYPKLIsdFPGLP 43

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

390-542

2.11e-06

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 51.69 E-value: 2.11e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  390 MEPAPTTPKKPAPTTPKEPapttpKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTttksapTTPKEPAPTTPKKPVPTTPK 469
Cdd:NF040712   188 IDPDFGRPLRPLATVPRLA-----REPADARPEEVEPAPAAEGAPATDSDPAEA------GTPDDLASARRRRAGVEQPE 256

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  470 EPAPTTPKEPAPTTTKSAPTTTKEPAPTTTksAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAP 542
Cdd:NF040712   257 DEPVGPGAAPAAEPDEATRDAGEPPAPGAA--ETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRR 327

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

380-449

5.40e-06

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 50.28 E-value: 5.40e-06

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  380 TTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAP 449
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGS 144

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

321-652

1.06e-05

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 49.77 E-value: 1.06e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  321 KEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKP 400
Cdd:NF033839   145 KDSSSSSSSGSSTKPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKLAVATYMSKILDDIQKHHLQK 224

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  401 APTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPa 480
Cdd:NF033839   225 EKHRQIVALIKELDELKKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSP- 303

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  481 ptttksaptttkEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTT 560
Cdd:NF033839   304 ------------QPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEVKPQPEK 371

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  561 PKEPAPTTPKKPAPttpkETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKltPTTPEKLAPTTPEEPAPTT 640
Cdd:NF033839   372 PKPEVKPQPETPKP----EVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEK--PKPEVKPQPEKPKPEVKPQ 445

                          330
                   ....*....|..
gi 2468437868  641 PEEPAPTTPEEP 652
Cdd:NF033839   446 PEKPKPEVKPQP 457

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

337-463

3.09e-05

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 47.84 E-value: 3.09e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  337 EPAPTTPKEPAPTTPK-EPAPTTTKSAPTTP---MEPAPTTPKEPAPTTTKSAPT------TPMEPAPTTPKKPAPTTPK 406
Cdd:NF040712   189 DPDFGRPLRPLATVPRlAREPADARPEEVEPapaAEGAPATDSDPAEAGTPDDLAsarrrrAGVEQPEDEPVGPGAAPAA 268

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  407 EPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSA--PTTPKEPAPTTPKKP 463
Cdd:NF040712   269 EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAeePARPEPPPAPKPKRR 327

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

325-452

3.91e-05

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 47.45 E-value: 3.91e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  325 ATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTT 404
Cdd:NF040712   206 AREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGEPPAPGA 285

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*....
gi 2468437868  405 PKEPAPTTPKEPAPTTPKEPAPTTTKEPA-PTTPKEPAPTTTKSAPTTP 452
Cdd:NF040712   286 AETPEAAEPPAPAPAAPAAPAAPEAEEPArPEPPPAPKPKRRRRRASVP 334

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

406-651

4.80e-05

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 47.84 E-value: 4.80e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  406 KEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTttk 485
Cdd:NF033839   277 KGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPE--- 353

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  486 saptttkepapttTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPA 565
Cdd:NF033839   354 -------------VKPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEV 420

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  566 PTTPKKPAPTTpKETAPTTPKEpapTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPtTPEEPA 645
Cdd:NF033839   421 KPQPEKPKPEV-KPQPEKPKPE---VKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKP-QADDKK 495


                   ....*.
gi 2468437868  646 PTTPEE 651
Cdd:NF033839   496 PSTPNN 501

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

367-506

7.87e-05

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 46.68 E-value: 7.87e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  367 MEPAPTTPKEPAPTTTKSAPT----TPMEPAPTTPKKPAPTTPKEPAPT-TPKEPAPTTPKEPAPTTTKEPAPTTPKEPA 441
Cdd:NF040712   188 IDPDFGRPLRPLATVPRLAREpadaRPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPA 267

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  442 PTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSA--PTTP 506
Cdd:NF040712   268 AEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRrrASVP 334

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

295-386

1.91e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.04 E-value: 1.91e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  295 TTKGPALTTPKEPTPTTPKEPASTTPKEPTATTiKSAPTTPKEPAPTTPKEPAPTTPKEPAPtttksAPTTPMEPAPTTP 374
Cdd:PRK12270    34 ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKA-PAAPAPAPPAAAAPAAPPKPAAAAAAAA-----APAAPPAAAAAAA 107

                           90
                   ....*....|..
gi 2468437868  375 KEPAPTTTKSAP 386
Cdd:PRK12270   108 PAAAAVEDEVTP 119

PspC_subgroup_1

NF033838

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...

367-438

2.13e-04

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.

Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 45.77 E-value: 2.13e-04

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  367 MEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEP-APTTPKEPAPTTPKEPaPTTTKEPAPTTPK 438
Cdd:NF033838   414 EKPAEQPQPAPAPQPEKPAPKPEKPAEQPKAEKPADQQAEEDyARRSEEEYNRLTQQQP-PKTEKPAQPSTPK 485

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

268-397

6.06e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 44.07 E-value: 6.06e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  268 QSIEKTSAKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPkEPTATTIKSAPTTPKEPAPTTPkEPA 347
Cdd:COG3266    236 AAEVLTARLVLLLLIIGSALKAPSQASSASAPATTSLGEQQEVSLPPAVAAQP-AAAAAAQPSAVALPAAPAAAAA-AAA 313

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 2468437868  348 PTTPKEPAPTTTKsaPTTPMEPAPTTPkEPAPTTTKSAPTTPMEPAPTTP 397
Cdd:COG3266    314 PAEAAAPQPTAAK--PVVTETAAPAAP-APEAAAAAAAPAAPAVAKKLAA 360

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

454-586

6.23e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 43.60 E-value: 6.23e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  454 EPAPTTPKKPVPTTPKEPapTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 533
Cdd:NF040712   189 DPDFGRPLRPLATVPRLA--REPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAP 266

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  534 APTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA------PTTPKETAPTTPK 586
Cdd:NF040712   267 AAEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAapeaeePARPEPPPAPKPK 325

SAV_2336_NTERM

NF041121

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...

392-474

8.87e-04

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.

Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 43.45 E-value: 8.87e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  392 PAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPkePAPTTTKSAPTTPKEPAPTTPKKPVPttPKEP 471
Cdd:NF041121    19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPA--PYPGSLAPPPPPPPGPAGAAPGAALP--VRVP 94


                   ...
gi 2468437868  472 APT 474
Cdd:NF041121    95 APP 97

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

563-727

1.29e-03

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 42.83 E-value: 1.29e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  563 EPAPTTPKKPAPTTPKETapttpKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTpekltptTPEKLAPTTPEEPAPTTPE 642
Cdd:NF040712   189 DPDFGRPLRPLATVPRLA-----REPADARPEEVEPAPAAEGAPATDSDPAEAG-------TPDDLASARRRRAGVEQPE 256

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  643 EPAPTTPEEPAPTTLEEPTPTTPeepapttpkTAAPNTPKEPAPTTPKEPAPTTPkeTAPTTPKGTAPTTLKEPAPTTPK 722
Cdd:NF040712   257 DEPVGPGAAPAAEPDEATRDAGE---------PPAPGAAETPEAAEPPAPAPAAP--AAPAAPEAEEPARPEPPPAPKPK 325


                   ....*
gi 2468437868  723 KPAPK 727
Cdd:NF040712   326 RRRRR 330

PspC_subgroup_1

NF033838

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...

336-469

1.75e-03

Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 42.69 E-value: 1.75e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  336 KEPAPTTPKEPAPTTPKepAPTTTKSAPTTPMEPAPTTPKEPAPTTT-KSAPTTPMEPAPTTPKKPAPTT-PKEPAPTTP 413
Cdd:NF033838   359 KEEAKEPRNEEKIKQAK--AKVESKKAEATRLEKIKTDRKKAEEEAKrKAAEEDKVKEKPAEQPQPAPAPqPEKPAPKPE 436

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  414 KEPAPTTPKEPAPTTTKEP-APTTPKEPAPTTTKSAPTTPKEPApttpkkpvPTTPK 469
Cdd:NF033838   437 KPAEQPKAEKPADQQAEEDyARRSEEEYNRLTQQQPPKTEKPAQ--------PSTPK 485

SAV_2336_NTERM

NF041121

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...

338-419

2.18e-03

Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 42.30 E-value: 2.18e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  338 PAPTTPKEPAPTTPKEPAPTTTksaPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPA 417
Cdd:NF041121    19 AAPPSPEGPAPTAASQPATPPP---PAAPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVPA 95


                   ..
gi 2468437868  418 PT 419
Cdd:NF041121    96 PP 97

Agg_substance

NF033875

LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, ...

345-480

3.04e-03

LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, are LPXTG-anchored large surface proteins that contribute to virulence. Several closely related paralogs may be found in a single strain.

Pssm-ID: 411439 [Multi-domain] Cd Length: 1306 Bit Score: 42.39 E-value: 3.04e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  345 EPAPTT--PKEPAPTTTKSAPTTPMEPAPTTPKEpapttTKSAPTTPMEPAPTtpKKPAPTTPKEPAPTT----PKEPAP 418
Cdd:NF033875    49 QPGTTTvqPDNPDPQSGSETPKTAVSEEATVQKD-----TTSQPTKVEEVASE--KNGAEQSSATPNDTTnaqqPTVGAE 121

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  419 TTPKEP---APTTTKEPApTTPKEPAPTTTKSAPTT--PKEPAPTTPKKPVPTTPKEPAPTTPKEPA 480
Cdd:NF033875   122 KSAQEQpvvSPETTNEPL-GQPTEVAPAENEANKSTsiPKEFETPDVDKAVDEAKKDPNITVVEKPA 187

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

540-697

6.30e-03

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 40.52 E-value: 6.30e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  540 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPek 619
Cdd:NF040712   193 GRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEP-- 270

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  620 lTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPtpttpeepapttpktAAPNTPKEPAPTTPKEPA--PTTP 697
Cdd:NF040712   271 -DEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEA---------------EEPARPEPPPAPKPKRRRrrASVP 334

SAV_2336_NTERM

NF041121

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...

361-443

7.70e-03

Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.37 E-value: 7.70e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  361 SAPTTPMEPAPTTPKEPAPTTTksaPTTPMEPAPTTPKKPAPTTPKEPAPtTPKEPAPTTPKEPAPTTTKEPAPTTPKEP 440
Cdd:NF041121    19 AAPPSPEGPAPTAASQPATPPP---PAAPPSPPGDPPEPPAPEPAPLPAP-YPGSLAPPPPPPPGPAGAAPGAALPVRVP 94


                   ...
gi 2468437868  441 APT 443
Cdd:NF041121    95 APP 97

Name

Accession

Description

Interval

E-value

cd00094

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1180-1440

1.20e-44

Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 160.17 E-value: 1.20e-44

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868 1180 TNICNGKPVDGLTTLRnGTLVAFRGHYFWMLSPFSPPSPARRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1258
Cdd:cd00094      1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868 1259 DIKDAGYPKPIFK-GFGGLTGQIVAALSTAKyknwPESVYFFKRGGSIQQYIYKQEPVQKCPgrrpalnypvygettqvr 1337
Cdd:cd00094     79 KNLEPGYPKPISDlGFPPTVKQIDAALRWPD----NGKTYFFKGDKYWRYDEKTQKMDPGYP------------------ 136

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868 1338 rRRFERAigpsqthtirihysparlayqdkgvlhnevkvsilWRGLPNVVTSAislpnIRKPDGYdYYAFSKDQYYNIDV 1417
Cdd:cd00094    137 -KLIETD-----------------------------------FPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFDP 174

                          250       260
                   ....*....|....*....|...
gi 2468437868 1418 PSRTARAITTRSGqtlSKVWYNC 1440
Cdd:cd00094    175 RSKEVRVGYPLKI---SSDWLGC 194

PHA03247

large tegument protein UL36; Provisional

346-864

2.72e-28

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 124.67 E-value: 2.72e-28

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  346 PAPTTPKEPAPTTTKSAPttPMEPAPTtPKEPAPTTTKSAPTTPMEPA-PTTPKKPaPTTPKEPAPTTPKEPAPTTPKEP 424
Cdd:PHA03247  2552 PPPLPPAAPPAAPDRSVP--PPRPAPR-PSEPAVTSRARRPDAPPQSArPRAPVDD-RGDPRGPAPPSPLPPDTHAPDPP 2627

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  425 APTttKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPT 504
Cdd:PHA03247  2628 PPS--PSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPP 2705

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  505 TPKEPAPTA-----PKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTttkePAPTTPKEPAPTTPKKPAPTTPKE 579
Cdd:PHA03247  2706 PTPEPAPHAlvsatPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARP----ARPPTTAGPPAPAPPAAPAAGPPR 2781

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  580 TAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKlAPTTPEEPAPTTPEEPAPTtPEEPAPTTLEE 659
Cdd:PHA03247  2782 RLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLP-PPTSAQPTAPPPPPGPPPP-SLPLGGSVAPG 2859

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  660 PTPTTPEEPAPTTPKTAAPNTPK-----EPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTT 734
Cdd:PHA03247  2860 GDVRRRPPSRSPAAKPAAPARPPvrrlaRPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRP 2939

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  735 KEPTSTTSDKPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTPkGTAPTTPKGTAPTTPKGT--APTTPKETAST 812
Cdd:PHA03247  2940 QPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSRE-APASSTPPLTGHSLSRVSswASSLALHEETD 3018

                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  813 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKKPTSTTSDKPAPTIPKETAP 864
Cdd:PHA03247  3019 PPPVSLKQTLWPPDDTEDSDADSLFDSDSERSDLEALDPLPPEPHDPFAHEP 3070

PHA03247

large tegument protein UL36; Provisional

288-726

4.58e-27

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 120.81 E-value: 4.58e-27

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  288 PTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTtpKEPAPTTTKSAPTTPM 367
Cdd:PHA03247  2569 PPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPS--PSPAANEPDPHPPPTV 2646

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  368 EPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPapttpkepaPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTttks 447
Cdd:PHA03247  2647 PPPERPRDDPAPGRVSRPRRARRLGRAAQASSP---------PQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPH---- 2713

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  448 aPTTPKEPAPTTPKKPVPTTPkePAPTTPKEPAPTTTKSAPTttkepAPTTTKSAPTTPKEPAPTAPKKPAPTtpkePAP 527
Cdd:PHA03247  2714 -ALVSATPLPPGPAAARQASP--ALPAAPAPPAVPAGPATPG-----GPARPARPPTTAGPPAPAPPAAPAAG----PPR 2781

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  528 TTPKEPAPTTTKSAPTTPKEPSPTTTkePAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPT 607
Cdd:PHA03247  2782 RLTRPAVASLSESRESLPSPWDPADP--PAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPG 2859

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  608 TP-KETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPApttleeptpttpeepaptTPKTAAPNTPKEPAP 686
Cdd:PHA03247  2860 GDvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPE------------------RPPQPQAPPPPQPQP 2921

                          410       420       430       440
                   ....*....|....*....|....*....|....*....|.
gi 2468437868  687 TTPKEPAPTTPKETAPTTPKGTAPTTLKEPAP-TTPKKPAP 726
Cdd:PHA03247  2922 QPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGePSGAVPQP 2962

PHA03247

large tegument protein UL36; Provisional

320-747

4.99e-27

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 120.81 E-value: 4.99e-27

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  320 PKEPTATTIKSAPTTPKEPAPTTPKEPAPT-------------------------------------TPKEPAPTTTKSA 362
Cdd:PHA03247  2489 PFAAGAAPDPGGGGPPDPDAPPAPSRLAPAilpdepvgepvhprmltwirgleelasddagdpppplPPAAPPAAPDRSV 2568

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  363 PttPMEPAPtTPKEPAPTTTKSAPTTPMEPA-PTTPKKPaPTTPKEPAPTTPKEPAPTTPKEPAPttTKEPAPTTPKEPA 441
Cdd:PHA03247  2569 P--PPRPAP-RPSEPAVTSRARRPDAPPQSArPRAPVDD-RGDPRGPAPPSPLPPDTHAPDPPPP--SPSPAANEPDPHP 2642

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  442 PTTTKSAPTTPKEPAPTTPKKPVPTTPKEPA------PTTPKEPAPTTT-------KSAPTTTKEPAPTTTKSAPTTPKE 508
Cdd:PHA03247  2643 PPTVPPPERPRDDPAPGRVSRPRRARRLGRAaqasspPQRPRRRAARPTvgsltslADPPPPPPTPEPAPHALVSATPLP 2722

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  509 PAPTAPKKPAPTTPKEPAPttPKEPAPTTTKSAPTTPKEPsPTTTKEPAPTTPKEPApTTPKKPAPTTPKETAPTTPKEP 588
Cdd:PHA03247  2723 PGPAAARQASPALPAAPAP--PAVPAGPATPGGPARPARP-PTTAGPPAPAPPAAPA-AGPPRRLTRPAVASLSESRESL 2798

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  589 APTTTKKPAPTTPKEPAPTTPKETAPTTPEKlTPTTPEKLAPTTPEEPAPTTPEEPAPTTP------EEPAPTTLEEPTP 662
Cdd:PHA03247  2799 PSPWDPADPPAAVLAPAAALPPAASPAGPLP-PPTSAQPTAPPPPPGPPPPSLPLGGSVAPggdvrrRPPSRSPAAKPAA 2877

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  663 TTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTS 742
Cdd:PHA03247  2878 PARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSG 2957


                   ....*
gi 2468437868  743 DKPAP 747
Cdd:PHA03247  2958 AVPQP 2962

PHA03247

large tegument protein UL36; Provisional

320-726

5.85e-27

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 120.43 E-value: 5.85e-27

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  320 PKEPTATTIKSAPTTPKEPAPTTP----KEPAPTTPKEPAPTTT---------KSAPTTPMEPAPTTPKEPAPTTTKSAP 386
Cdd:PHA03247  2557 PAAPPAAPDRSVPPPRPAPRPSEPavtsRARRPDAPPQSARPRApvddrgdprGPAPPSPLPPDTHAPDPPPPSPSPAAN 2636

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  387 TTPMEPAPTTPKKPAPTTPKEP-----------------APTTPKEPAPTTPKEP-APTTTKEPAPTTPKEPAPTTTKSA 448
Cdd:PHA03247  2637 EPDPHPPPTVPPPERPRDDPAPgrvsrprrarrlgraaqASSPPQRPRRRAARPTvGSLTSLADPPPPPPTPEPAPHALV 2716

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  449 PTTPKEPAPTTPKKPVPTTPKEPAPttPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPT 528
Cdd:PHA03247  2717 SATPLPPGPAAARQASPALPAAPAP--PAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSES 2794

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  529 TPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTT 608
Cdd:PHA03247  2795 RESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAK 2874

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  609 PkeTAPTTPEKLTPTTPeklAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTT 688
Cdd:PHA03247  2875 P--AAPARPPVRRLARP---AVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDP 2949

                          410       420       430       440
                   ....*....|....*....|....*....|....*....|
gi 2468437868  689 P--KEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAP 726
Cdd:PHA03247  2950 AgaGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAP 2989

PHA03247

large tegument protein UL36; Provisional

335-857

1.99e-26

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 118.50 E-value: 1.99e-26

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  335 PKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPmePAPTTPKEPAPTTTKSAPT-TPMEP------------APTTPKKPA 401
Cdd:PHA03247  2475 PGAPVYRRPAEARFPFAAGAAPDPGGGGPPDP--DAPPAPSRLAPAILPDEPVgEPVHPrmltwirgleelASDDAGDPP 2552

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  402 PTTPKEPAPTTPKEPAPTTPKEPAPT----TTKEPAPTTPKEPA-PTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTP 476
Cdd:PHA03247  2553 PPLPPAAPPAAPDRSVPPPRPAPRPSepavTSRARRPDAPPQSArPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPS 2632

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  477 KEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEP 556
Cdd:PHA03247  2633 PAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAP 2712

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  557 APTTPKEPAPTTPKKPAPTTPKETAPTTPKepaptttkkpapttpkePAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEP 636
Cdd:PHA03247  2713 HALVSATPLPPGPAAARQASPALPAAPAPP-----------------AVPAGPATPGGPARPARPPTTAGPPAPAPPAAP 2775

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  637 ApTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPkEPAPTTPKETAPTTPKGTAPTTLKEP 716
Cdd:PHA03247  2776 A-AGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPSLPLG 2853

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  717 APTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTPKGTAPTTPKGTAPT 796
Cdd:PHA03247  2854 GSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPP 2933

                          490       500       510       520       530       540
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2468437868  797 TPKGTAPTTPKETASTTPKGTAPTTLKEP---APTTPKKPAPKELAPTTTKKPTSTTSDKPAPT 857
Cdd:PHA03247  2934 PPPPRPQPPLAPTTDPAGAGEPSGAVPQPwlgALVPGRVAVPRFRVPQPAPSREAPASSTPPLT 2997

PHA03247

large tegument protein UL36; Provisional

288-692

1.90e-25

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 115.42 E-value: 1.90e-25

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  288 PTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPaPTTPKEPApttpkepAPTTTKSAPTTPM 367
Cdd:PHA03247  2629 PSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSP-PQRPRRRA-------ARPTVGSLTSLAD 2700

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  368 EPAPTTPKEPAPTTTKSAptTPMEPAPTTPKKPAPTTPKEPAPttpkEPAPTTPKEPAptttkepAPTTPKEPAPTTTKS 447
Cdd:PHA03247  2701 PPPPPPTPEPAPHALVSA--TPLPPGPAAARQASPALPAAPAP----PAVPAGPATPG-------GPARPARPPTTAGPP 2767

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  448 APTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAP 527
Cdd:PHA03247  2768 APAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPP 2847

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  528 TtpkePAPTTTKSAPTTPKEPSPTTTKEPA-PTTPKEPAPTTPKKPAPTTPKETAPTTPKEpaptttkkpapttpKEPAP 606
Cdd:PHA03247  2848 P----SLPLGGSVAPGGDVRRRPPSRSPAAkPAAPARPPVRRLARPAVSRSTESFALPPDQ--------------PERPP 2909

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  607 TTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAP 686
Cdd:PHA03247  2910 QPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAP 2989


                   ....*.
gi 2468437868  687 TTPKEP 692
Cdd:PHA03247  2990 ASSTPP 2995

PHA03247

large tegument protein UL36; Provisional

369-942

4.21e-21

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 101.17 E-value: 4.21e-21

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  369 PAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKP-APTTPKEPAPTTPKEPAPTTPKEPAPTT----TKEPAPTTPKEPAPT 443
Cdd:PHA03247  2475 PGAPVYRRPAEARFPFAAGAAPDPGGGGPPDPdAPPAPSRLAPAILPDEPVGEPVHPRMLTwirgLEELASDDAGDPPPP 2554

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  444 TTKSAPttpkepaPTTPKKPVPttPKEPAPTtPKEPAPTTTKSAPTTTKEPA-PTTTKSAPTTPKEPAPTAPKKPAPTTP 522
Cdd:PHA03247  2555 LPPAAP-------PAAPDRSVP--PPRPAPR-PSEPAVTSRARRPDAPPQSArPRAPVDDRGDPRGPAPPSPLPPDTHAP 2624

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  523 KEPAPTtpKEPAPTTTKSAPTTPKEPSPTTTKEPAPttPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPK 602
Cdd:PHA03247  2625 DPPPPS--PSPAANEPDPHPPPTVPPPERPRDDPAP--GRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLAD 2700

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  603 EPAPTTPKETAPTTpekLTPTTPEKLAPTTPEEPAPTTPEEPA-PTTPEEPAPTtleeptpttpeepapttpktAAPNTP 681
Cdd:PHA03247  2701 PPPPPPTPEPAPHA---LVSATPLPPGPAAARQASPALPAAPApPAVPAGPATP--------------------GGPARP 2757

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  682 KEPaPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAptttkeptsttsDKPAPTTPKETAPTTPEET 761
Cdd:PHA03247  2758 ARP-PTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPA------------DPPAAVLAPAAALPPAASP 2824

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  762 APTTPEETAPTTpkgTAPTTPKGTAPTTPKGTAPTTPKGT----APTTPKETASTTPKGTAPTTLKEPAPTTPKKPapke 837
Cdd:PHA03247  2825 AGPLPPPTSAQP---TAPPPPPGPPPPSLPLGGSVAPGGDvrrrPPSRSPAAKPAAPARPPVRRLARPAVSRSTES---- 2897

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  838 LAPTTTKKPTSTTSDKPAPTIPKETAPTIPKEPAPTTPKKPPPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELS 917
Cdd:PHA03247  2898 FALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRF 2977

                          570       580
                   ....*....|....*....|....*
gi 2468437868  918 AEPTPKALENSPKEPGVPTTKTPAA 942
Cdd:PHA03247  2978 RVPQPAPSREAPASSTPPLTGHSLS 3002

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

66-108

1.18e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 83.19 E-value: 1.18e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 2468437868    66 AELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVH 108
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

26-68

9.12e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 80.88 E-value: 9.12e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 2468437868    26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

Somatomedin_B

pfam01033

Somatomedin B domain;

69-106

3.98e-18

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 78.88 E-value: 3.98e-18

                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 2468437868   69 SCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAE 106
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLG 39

PHA03247

large tegument protein UL36; Provisional

120-650

1.20e-17

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 89.61 E-value: 1.20e-17

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  120 PPPSGASQTIKSTTKRSPKPPNKKKTKkvieseeitevkdnkknrtkkkttpkplvvdeagsGLDNGDFKVTTPDTSttq 199
Cdd:PHA03247  2575 PRPSEPAVTSRARRPDAPPQSARPRAP-----------------------------------VDDRGDPRGPAPPSP--- 2616

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  200 hnkvtTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKET-QSIEKTSAKDL 278
Cdd:PHA03247  2617 -----LPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPpQRPRRRAARPT 2691

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  279 APTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTT 358
Cdd:PHA03247  2692 VGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAP 2771

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  359 TKSAPTTpmePAPTTPKEPAPTTTKSAPTTPMEPAPTTPkkPAPTTPKEPAPTTPKEPAPTtpkEPAPTTTKEPAPTTPK 438
Cdd:PHA03247  2772 PAAPAAG---PPRRLTRPAVASLSESRESLPSPWDPADP--PAAVLAPAAALPPAASPAGP---LPPPTSAQPTAPPPPP 2843

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  439 EPAPTTT-------------KSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT 505
Cdd:PHA03247  2844 GPPPPSLplggsvapggdvrRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQP 2923

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  506 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPtTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTP 585
Cdd:PHA03247  2924 PPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVP-QPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002

                          490       500       510       520       530       540       550
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2468437868  586 KEPAPTTTKKPAPTTPKEPA-------PTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTP--EEPAPTTPE 650
Cdd:PHA03247  3003 RVSSWASSLALHEETDPPPVslkqtlwPPDDTEDSDADSLFDSDSERSDLEALDPLPPEPHDPfaHEPDPATPE 3076

Somatomedin_B

pfam01033

Somatomedin B domain;

29-67

1.99e-16

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 74.26 E-value: 1.99e-16

                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 2468437868   29 SCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAE 67
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLGE 40

PRK07764

DNA polymerase III subunits gamma and tau; Validated

330-653

1.50e-13

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 75.79 E-value: 1.50e-13

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  330 SAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTpmEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPA 409
Cdd:PRK07764   388 AGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAP--APAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQ 465

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  410 PTTPKEPAPTTPKEPAPTTTKEPAP-TTPKEPAPTTTKSAP--------------------------------------- 449
Cdd:PRK07764   466 PAPAPAAAPEPTAAPAPAPPAAPAPaAAPAAPAAPAAPAGAddaatlrerwpeilaavpkrsrktwaillpeatvlgvrg 545

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  450 --------------------------------------------TTPKEPAPTTPKKPVPTTPKE--PAPTTPKEPAPTT 483
Cdd:PRK07764   546 dtlvlgfstgglarrfaspgnaevlvtalaeelggdwqveavvgPAPGAAGGEGPPAPASSGPPEeaARPAAPAAPAAPA 625

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  484 TKSAPTTTKEPAPTTTKSAPT-TPKEPAPTAPKKPAPTTPKEPAP--TTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTT 560
Cdd:PRK07764   626 APAPAGAAAAPAEASAAPAPGvAAPEHHPKHVAVPDASDGGDGWPakAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAP 705

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  561 PKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPTT 640
Cdd:PRK07764   706 AATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEM 785

                          410
                   ....*....|...
gi 2468437868  641 PEEPAPTTPEEPA 653
Cdd:PRK07764   786 AEDDAPSMDDEDR 798

PRK07003

DNA polymerase III subunit gamma/tau;

335-574

3.73e-13

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 74.50 E-value: 3.73e-13

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  335 PKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPK 414
Cdd:PRK07003   381 PAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASAD 460

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  415 EPAPTTPKEPA--PTTTKEPAPTTP----KEPAPTTTKSAPTTPKEPAPTTPKKPVPtTPKEPAPttPKEPAPTTTKSAP 488
Cdd:PRK07003   461 SRCDERDAQPPadSGSASAPASDAPpdaaFEPAPRAAAPSAATPAAVPDARAPAAAS-REDAPAA--AAPPAPEARPPTP 537

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  489 TTTKEPAPTTTKSAP-----------TTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTttksapTTPKEPSPTTTKEPA 557
Cdd:PRK07003   538 AAAAPAARAGGAAAAldvlrnagmrvSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQV------PTPRARAATGDAPPN 611

                          250
                   ....*....|....*..
gi 2468437868  558 PTTPKEPAPTTPKKPAP 574
Cdd:PRK07003   612 GAARAEQAAESRGAPPP 628

PRK12323

DNA polymerase III subunit gamma/tau;

376-577

4.73e-13

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 74.14 E-value: 4.73e-13

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  376 EPAPTTTKSAPTTPMEPA--PTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPtTTKEPAPtTPKEPAPTTTKSAPTTPK 453
Cdd:PRK12323   371 GAGPATAAAAPVAQPAPAaaAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAP-ARRSPAP-EALAAARQASARGPGGAP 448

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  454 EPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAP--TTPKEPAPTAPKKPAPTTPKEPAPTTPK 531
Cdd:PRK12323   449 APAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPweELPPEFASPAPAQPDAAPAGWVAESIPD 528

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*.
gi 2468437868  532 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTP 577
Cdd:PRK12323   529 PATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLP 574

PRK07764

DNA polymerase III subunits gamma and tau; Validated

341-565

4.93e-13

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 74.25 E-value: 4.93e-13

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  341 TTPKEPAPTTPKEPAPTTTKSAPTTPmePAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTtpkEPAPTTPKEPAPTT 420
Cdd:PRK07764   590 PAPGAAGGEGPPAPASSGPPEEAARP--AAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAP---EHHPKHVAVPDASD 664

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  421 PKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPkkpvpttpkePAPTTPKEPAPTTTKSAPTTTKEPAPTTTK 500
Cdd:PRK07764   665 GGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPA----------PAATPPAGQADDPAAQPPQAAQGASAPSPA 734

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  501 SAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTT---TKEPAPTTPKEPA 565
Cdd:PRK07764   735 ADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAeddAPSMDDEDRRDAE 802

PRK12323

DNA polymerase III subunit gamma/tau;

338-557

6.06e-13

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 73.76 E-value: 6.06e-13

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  338 PAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTtpKEPA 417
Cdd:PRK12323   374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGA--PAPA 451

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  418 PTTPKEPAPTTtkePAPTTPKEPAPTTTKSAPtTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTttkePAPT 497
Cdd:PRK12323   452 PAPAAAPAAAA---RPAAAGPRPVAAAAAAAP-ARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPA----GWVA 523

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  498 TTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPA 557
Cdd:PRK12323   524 ESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGDWPA 583

PHA03307

transcriptional regulator ICP4; Provisional

274-583

8.14e-13

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 73.67 E-value: 8.14e-13

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  274 SAKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKE 353
Cdd:PHA03307    57 AGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSE 136

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  354 PAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPK-KPAPTTPKEPAPT----TPKEPAPTTPKEPAPTT 428
Cdd:PHA03307   137 MLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEEtARAPSSPPAEPPPstppAAASPRPPRRSSPISAS 216

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  429 TKEPAPTTPKEPA----PTTTKSAPTTPKE---------PAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPA 495
Cdd:PHA03307   217 ASSPAPAPGRSAAddagASSSDSSSSESSGcgwgpenecPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSP 296

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  496 PTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 575
Cdd:PHA03307   297 SPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPS 376


                   ....*...
gi 2468437868  576 TPKETAPT 583
Cdd:PHA03307   377 SPAASAGR 384

PRK07764

DNA polymerase III subunits gamma and tau; Validated

329-652

1.91e-12

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 72.33 E-value: 1.91e-12

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  329 KSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTtkSAPTTPMEPAPTTPKKPAPTTPKEP 408
Cdd:PRK07764   383 RRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAP--APAPAPPSPAGNAPAGGAPSPPPAA 460

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  409 APTTPKEPAPTtpkePAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTP-------------------------KKP 463
Cdd:PRK07764   461 APSAQPAPAPA----AAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDaatlrerwpeilaavpkrsrktwaiLLP 536

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  464 ---------------------------------------------------VPTTPKEPAPTTPKEPAPTTTKSAPTTTK 492
Cdd:PRK07764   537 eatvlgvrgdtlvlgfstgglarrfaspgnaevlvtalaeelggdwqveavVGPAPGAAGGEGPPAPASSGPPEEAARPA 616

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  493 EPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA--PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPK 570
Cdd:PRK07764   617 APAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAvpDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGA 696

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  571 KPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPT----TPEKLAPTTPEEPAPTTPEEPAP 646
Cdd:PRK07764   697 APAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPdpagAPAQPPPPPAPAPAAAPAAAPPP 776


                   ....*.
gi 2468437868  647 TTPEEP 652
Cdd:PRK07764   777 SPPSEE 782

PRK12323

DNA polymerase III subunit gamma/tau;

323-530

6.97e-12

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 70.29 E-value: 6.97e-12

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  323 PTATTIKSAPTTPKEPAPTtPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKkPAP 402
Cdd:PRK12323   375 ATAAAAPVAQPAPAAAAPA-AAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPA-PAP 452

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  403 TTPKEPAPTTPkePAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPttPKEPAPTTPKKPVPTtPKEPAPTTPKEPAPT 482
Cdd:PRK12323   453 APAAAPAAAAR--PAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPP--PWEELPPEFASPAPA-QPDAAPAGWVAESIP 527

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*...
gi 2468437868  483 TTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKkPAPTTPKEPAPTTP 530
Cdd:PRK12323   528 DPATADPDDAFETLAPAPAAAPAPRAAAATEPV-VAPRPPRASASGLP 574

PRK10263

DNA translocase FtsK; Provisional

355-582

7.81e-12

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 70.50 E-value: 7.81e-12

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  355 APTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPtTPKKPAPTTPKEPAPTTPkEPAPTTPKEPAPTTTKEPAP 434
Cdd:PRK10263   325 AATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVP-GPQTGEPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQ 402

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  435 TTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKepapttPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAP 514
Cdd:PRK10263   403 PQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPA------PEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEP 476

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  515 KKPAPtTPKEPAPTTpkEPAPTTTKSAPTTPK----------------------EPSPTTTKEPAPTTPKEPAPTTPKKP 572
Cdd:PRK10263   477 LYQQP-QPVEQQPVV--EPEPVVEETKPARPPlyyfeeveekrarereqlaawyQPIPEPVKEPEPIKSSLKAPSVAAVP 553

                          250
                   ....*....|
gi 2468437868  573 APTTPKETAP 582
Cdd:PRK10263   554 PVEAAAAVSP 563

PHA03307

transcriptional regulator ICP4; Provisional

330-703

3.50e-11

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 68.27 E-value: 3.50e-11

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  330 SAPTTPKEPAPTTPKEPAPTTPKEPAPTTT-------KSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAP 402
Cdd:PHA03307    23 RPPATPGDAADDLLSGSQGQLVSDSAELAAvtvvagaAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAR 102

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  403 T-TPKEPAPTTPKEPAPTT-PKEPAPTttkePAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPA 480
Cdd:PHA03307   103 EgSPTPPGPSSPDPPPPTPpPASPPPS----PAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSS 178

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  481 PTTTKSAPTTTKEPAPTttkSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTT 560
Cdd:PHA03307   179 PEETARAPSSPPAEPPP---STPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENEC 255

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  561 PKEPAPTTpkkPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEklTPTTPEKLAPTTPEEPAPTT 640
Cdd:PHA03307   256 PLPRPAPI---TLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPS--SPRASSSSSSSRESSSSSTS 330

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  641 PEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAPT 703
Cdd:PHA03307   331 SSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAA 393

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

260-587

4.07e-11

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 67.79 E-value: 4.07e-11

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  260 KTTSAKETQSIEKTSAKDLAPT----SKVLAKPTPKPETTTKGP-ALTTPKEPTPTTPKEPASTTPKEptattiKSAPTT 334
Cdd:PTZ00449   478 KIQFTQEIKKLIKKSKKKLAPIeeedSDKHDEPPEGPEASGLPPkAPGDKEGEEGEHEDSKESDEPKE------GGKPGE 551

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  335 PKEPAPTtpKEPAPTTPKEPA--PTTTKSaPTTPMEP-APTTPKEPAPTTTKSAPTTPMepAPTTPKKPA----PTTPKE 407
Cdd:PTZ00449   552 TKEGEVG--KKPGPAKEHKPSkiPTLSKK-PEFPKDPkHPKDPEEPKKPKRPRSAQRPT--RPKSPKLPElldiPKSPKR 626

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  408 P-APTTPKEP-APTTPKEPA-PTTTKEP-APTTPKEPAP------------TTTKSAPTTPKEPAPTTPKKPVPTTPKEP 471
Cdd:PTZ00449   627 PeSPKSPKRPpPPQRPSSPErPEGPKIIkSPKPPKSPKPpfdpkfkekfydDYLDAAAKSKETKTTVVLDESFESILKET 706

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  472 APTTPKEPAPTTTKSAPTTtkepaPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPT 551
Cdd:PTZ00449   707 LPETPGTPFTTPRPLPPKL-----PRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKEED 781

                          330       340       350
                   ....*....|....*....|....*....|....*.
gi 2468437868  552 TTKEPAPTTPKEPAPTTPKKPAPTTPKeTAPTTPKE 587
Cdd:PTZ00449   782 IHAETGEPDEAMKRPDSPSEHEDKPPG-DHPSLPKK 816

smart00120

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1232-1276

9.89e-11

Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 58.02 E-value: 9.89e-11

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 2468437868  1232 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPIFKGFGGL 1276
Cdd:smart00120    1 IDAAFELRD--GKTYFFKGDKYWRFDPKRVDPGYPKLISSFFPGL 43

rne

PRK10811

ribonuclease E; Reviewed

357-557

1.21e-10

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 66.60 E-value: 1.21e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  357 TTTKSAPTTPMEPAPTTPKEPA-PTTTKSAPTTPMEPAPTTPkkPAPTTPKEPAPTTPKEPAPTTPKE-PAPTTTKEPAP 434
Cdd:PRK10811   848 VRPQDVQVEEQREAEEVQVQPVvAEVPVAAAVEPVVSAPVVE--AVAEVVEEPVVVAEPQPEEVVVVEtTHPEVIAAPVT 925

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  435 TTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAptttksaptttkEPAPTTTKSAPTTPKEPAPTAP 514
Cdd:PRK10811   926 EQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVA------------EPEVVAQPAAPVVAEVAAEVET 993

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 2468437868  515 KKPAPTTPKEPAPTTPkePAPTTTKSAPTTpKEPSPTTTKEPA 557
Cdd:PRK10811   994 VTAVEPEVAPAQVPEA--TVEHNHATAPMT-RAPAPEYVPEAP 1033

PRK07764

DNA polymerase III subunits gamma and tau; Validated

383-726

2.31e-10

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 65.39 E-value: 2.31e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  383 KSAPTTPMEPAPTTPKKPAPTTPKEPAPTtPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPttPKEPAPTTPKK 462
Cdd:PRK07764   383 RRLGVAGGAGAPAAAAPSAAAAAPAAAPA-PAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNA--PAGGAPSPPPA 459

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  463 PVPTTPKEPAPTTPKEPAptttksaptTTKEPAPTTTKSAPTTPKEPAPTAPKKPAP----------------------- 519
Cdd:PRK07764   460 AAPSAQPAPAPAAAPEPT---------AAPAPAPPAAPAPAAAPAAPAAPAAPAGADdaatlrerwpeilaavpkrsrkt 530

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  520 -----------------------------------------------------------TTPKEPAPTTPKEPAPTTTKS 540
Cdd:PRK07764   531 waillpeatvlgvrgdtlvlgfstgglarrfaspgnaevlvtalaeelggdwqveavvgPAPGAAGGEGPPAPASSGPPE 610

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  541 APTTPKEPSPTTTKEPA--PTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPttpe 618
Cdd:PRK07764   611 EAARPAAPAAPAAPAAPapAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPA---- 686

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  619 kltPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPK 698
Cdd:PRK07764   687 ---PAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPA 763

                          410       420
                   ....*....|....*....|....*...
gi 2468437868  699 ETAPTTPKGTAPTTLKEPAPTTPKKPAP 726
Cdd:PRK07764   764 PAPAAAPAAAPPPSPPSEEEEMAEDDAP 791

PRK07994

DNA polymerase III subunits gamma and tau; Validated

320-473

2.43e-10

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 65.27 E-value: 2.43e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  320 PKEPTATTikSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTP--MEPAPTTP 397
Cdd:PRK07994   361 PAAPLPEP--EVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqRAQGATKA 438

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2468437868  398 KKPAPTTPKEPAPtTPKEPAPTTPKEPAPTTTkEPAPttPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAP 473
Cdd:PRK07994   439 KKSEPAAASRARP-VNSALERLASVRPAPSAL-EKAP--AKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTP 510

PRK07764

DNA polymerase III subunits gamma and tau; Validated

361-702

3.03e-10

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 65.01 E-value: 3.03e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  361 SAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTkEPAPTTPKEP 440
Cdd:PRK07764   388 AGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSP-PPAAAPSAQP 466

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  441 APTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTK----------------------------------- 485
Cdd:PRK07764   467 APAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATlrerwpeilaavpkrsrktwaillpeatvlgvrgd 546

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  486 ---------------------------------SAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKE 532
Cdd:PRK07764   547 tlvlgfstgglarrfaspgnaevlvtalaeelgGDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAA 626

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  533 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKET 612
Cdd:PRK07764   627 PAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPA 706

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  613 APTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPntpkEPAPTTPKEP 692
Cdd:PRK07764   707 ATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAA----APPPSPPSEE 782

                          410
                   ....*....|
gi 2468437868  693 APTTPKETAP 702
Cdd:PRK07764   783 EEMAEDDAPS 792

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

367-478

3.51e-10

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 64.45 E-value: 3.51e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  367 MEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKePAPTTPKEPAPTTPKEPAPTttkEPAPTTPKEPAPTTTK 446
Cdd:PRK14950   343 TTSYGQLPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEP---VRETATPPPVPPRPVA 418

                           90       100       110
                   ....*....|....*....|....*....|....
gi 2468437868  447 SAPTTPKEPAPTTPKK--PVPTTPKEPAPTTPKE 478
Cdd:PRK14950   419 PPVPHTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

PHA03307

transcriptional regulator ICP4; Provisional

361-786

4.30e-10

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 64.81 E-value: 4.30e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  361 SAPTTPMEPAPTT-PKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKE 439
Cdd:PHA03307    23 RPPATPGDAADDLlSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAR 102

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  440 PAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAP 519
Cdd:PHA03307   103 EGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEET 182

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  520 -TTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAP 598
Cdd:PHA03307   183 aRAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAP 262

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  599 TtpkePAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPttpeePAPTTLEEPTPTTPEEPAPTTPKTAAP 678
Cdd:PHA03307   263 I----TLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSG-----PAPSSPRASSSSSSSRESSSSSTSSSS 333

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  679 NTPKEPAPTTPKE----PAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTpketa 754
Cdd:PHA03307   334 ESSRGAAVSPGPSpsrsPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFP----- 408

                          410       420       430
                   ....*....|....*....|....*....|..
gi 2468437868  755 pttpeETAPTTPEETAPTTPKGTAPTTPKGTA 786
Cdd:PHA03307   409 -----AGRPRPSPLDAGAASGAFYARYPLLTP 435

PRK10263

DNA translocase FtsK; Provisional

324-586

4.50e-10

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 64.72 E-value: 4.50e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  324 TATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTtPKEPAPTTTKSAPTTPMEPAPTTPKKPAPT 403
Cdd:PRK10263   317 TEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVPG-PQTGEPVIAPAPEGYPQQSQYAQPAVQYNE 395

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  404 TPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKE---PAPTTPKKPVPTTPKE---PAPTTPK 477
Cdd:PRK10263   396 PLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAwqaEEQQSTFAPQSTYQTEqtyQQPAAQE 475

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  478 EPAPTTTKSAPTTTKEPAPTTTKSAPTTPK----------------------EPAPTAPKKPAPTTPKEPAPTTPKEPAP 535
Cdd:PRK10263   476 PLYQQPQPVEQQPVVEPEPVVEETKPARPPlyyfeeveekrarereqlaawyQPIPEPVKEPEPIKSSLKAPSVAAVPPV 555

                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  536 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPA--PTTPKKPAPTTPKETAPTTPK 586
Cdd:PRK10263   556 EAAAAVSPLASGVKKATLATGAAATVAAPVfsLANSGGPRPQVKEGIGPQLPR 608

PRK07764

DNA polymerase III subunits gamma and tau; Validated

403-620

6.08e-10

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 63.85 E-value: 6.08e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  403 TTPKEPAPTTPKEPAPTTPKEPAPtttKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPT 482
Cdd:PRK07764   590 PAPGAAGGEGPPAPASSGPPEEAA---RPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGG 666

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  483 TTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPK 562
Cdd:PRK07764   667 DGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPD 746

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  563 EP----APTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKL 620
Cdd:PRK07764   747 DPpdpaGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVAMEL 808

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

258-547

6.97e-10

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 63.94 E-value: 6.97e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  258 KEKTTSAKETQSIEKTSAKDlAPTSKVLAKPTPKPE-TTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPK 336
Cdd:PTZ00449   532 GEHEDSKESDEPKEGGKPGE-TKEGEVGKKPGPAKEhKPSKIPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK 610

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  337 EPA-------PTTPKEP-APTTPKEPAPTTTKSAPTTPmePAPTTPKEPAPtttksaPTTPMEPAPTTPKKPAPTTPKEP 408
Cdd:PTZ00449   611 SPKlpelldiPKSPKRPeSPKSPKRPPPPQRPSSPERP--EGPKIIKSPKP------PKSPKPPFDPKFKEKFYDDYLDA 682

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  409 APTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAP 488
Cdd:PTZ00449   683 AAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHE 762

                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2468437868  489 TTTKEPAPTTTKSAPTTPKEPAPTApkkpaptTPKEPA--PTTPKEPAPTTTKSAPTTPKE 547
Cdd:PTZ00449   763 TPADTPLPDILAEEFKEEDIHAETG-------EPDEAMkrPDSPSEHEDKPPGDHPSLPKK 816

PHA03247

large tegument protein UL36; Provisional

525-1064

9.34e-10

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 63.80 E-value: 9.34e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  525 PAPTTPKEPAPTTTKSAPTTpkEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPttpkepaptTTKKPAPTTPKEP 604
Cdd:PHA03247  2475 PGAPVYRRPAEARFPFAAGA--APDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPVH---------PRMLTWIRGLEEL 2543

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  605 APTTPKETAPTTPEKLTPTTPEKLAPttPEEPAPtTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNtPKEP 684
Cdd:PHA03247  2544 ASDDAGDPPPPLPPAAPPAAPDRSVP--PPRPAP-RPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPS-PLPP 2619

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  685 APTTPKEPAPT---TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKETAPTTPEET 761
Cdd:PHA03247  2620 DTHAPDPPPPSpspAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLA 2699

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  762 APTTPEETAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKETAST----TPKGTAPTTLKEPAPTTPKKPAPke 837
Cdd:PHA03247  2700 DPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATpggpARPARPPTTAGPPAPAPPAAPAA-- 2777

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  838 laptttkkptsttsdKPAPTIPKETAPTIPKEPAPTTPKKPPPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELS 917
Cdd:PHA03247  2778 ---------------GPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPP 2842

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  918 AEPTPKALE-NSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITTTTTQV 996
Cdd:PHA03247  2843 PGPPPPSLPlGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQ 2922

                          490       500       510       520       530       540
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  997 TSTTTQDTTPFKITTLKTTTLAPKVTTTTKKTITTTEIMNKPEETAKPKDRATNSKVTTPKPQKPTKA 1064
Cdd:PHA03247  2923 PPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPA 2990

PHA03247

large tegument protein UL36; Provisional

203-569

9.49e-10

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 63.80 E-value: 9.49e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  203 VTTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTS 282
Cdd:PHA03247  2719 TPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESL 2798

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  283 KVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPApTTPKEPAPTTPKEPAPTTTKSA 362
Cdd:PHA03247  2799 PSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGS-VAPGGDVRRRPPSRSPAAKPAA 2877

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  363 PTTPmePAPTTPKEPAPTTTKSAPTTPMEPAPttPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAP 442
Cdd:PHA03247  2878 PARP--PVRRLARPAVSRSTESFALPPDQPER--PPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAG 2953

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  443 TTTKSAPtTPKEPAPTTPKKPVPTTpkEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPK------K 516
Cdd:PHA03247  2954 EPSGAVP-QPWLGALVPGRVAVPRF--RVPQPAPSREAPASSTPPLTGHSLSRVSSWASSLALHEETDPPPVSlkqtlwP 3030

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  517 PAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTP 569
Cdd:PHA03247  3031 PDDTEDSDADSLFDSDSERSDLEALDPLPPEPHDPFAHEPDPATPEAGARESP 3083

PRK12323

DNA polymerase III subunit gamma/tau;

424-641

9.50e-10

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 63.36 E-value: 9.50e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  424 PAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTttksap 503
Cdd:PRK12323   374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGA------ 447

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  504 ttpKEPAPTAPKKPAPTTPkepAPTTPKEPAPTTTKSAPtTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTtpkETAPT 583
Cdd:PRK12323   448 ---PAPAPAPAAAPAAAAR---PAAAGPRPVAAAAAAAP-ARAAPAAAPAPADDDPPPWEELPPEFASPAPA---QPDAA 517

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  584 TPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPeKLAPTTPEEPAPTTP 641
Cdd:PRK12323   518 PAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEP-VVAPRPPRASASGLP 574

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

369-449

1.74e-09

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 62.60 E-value: 1.74e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  369 PAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSA 448
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118


                   .
gi 2468437868  449 P 449
Cdd:PRK12270   119 P 119

PRK07994

DNA polymerase III subunits gamma and tau; Validated

338-479

1.90e-09

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 62.19 E-value: 1.90e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  338 PAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPtttkSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPA 417
Cdd:PRK07994   361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPP----PASAPQQAPAVPLPETTSQLLAARQQLQRAQGAT 436

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  418 PTTPKEPAPTTTKEPAPT-----TPKEPAPTTTKSAPtTPKEPAPTTPKKPVPTtpKEPAPTTPKEP 479
Cdd:PRK07994   437 KAKKSEPAAASRARPVNSalerlASVRPAPSALEKAP-AKKEAYRWKATNPVEV--KKEPVATPKAL 500

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

339-431

1.98e-09

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 62.13 E-value: 1.98e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  339 APTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPaptTPKEPAPTTPKE--P 416
Cdd:PRK14950   361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVP---HTPESAPKLTRAaiP 437

                           90
                   ....*....|....*
gi 2468437868  417 APTTPKEPAPTTTKE 431
Cdd:PRK14950   438 VDEKPKYTPPAPPKE 452

PRK07994

DNA polymerase III subunits gamma and tau; Validated

392-552

2.48e-09

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 61.81 E-value: 2.48e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  392 PAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTP-KEPAPTTPKKPVPTTPKE 470
Cdd:PRK07994   361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQlLAARQQLQRAQGATKAKK 440

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  471 PAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPtTPKEPAPTAPKKPAPTtpKEPAPTTPKEPaptttKSAPTTPKEPSP 550
Cdd:PRK07994   441 SEPAAASRARPVNSALERLASVRPAPSALEKAP-AKKEAYRWKATNPVEV--KKEPVATPKAL-----KKALEHEKTPEL 512


                   ..
gi 2468437868  551 TT 552
Cdd:PRK07994   513 AA 514

PRK08691

DNA polymerase III subunits gamma and tau; Validated

342-555

2.62e-09

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 61.65 E-value: 2.62e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  342 TPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEpapTTPKKPAPTTPKEPAPTTPKEPAPTTP 421
Cdd:PRK08691   359 APLAAASCDANAVIENTELQSPSAQTAEKETAAKKPQPRPEAETAQTPVQ---TASAAAMPSEGKTAGPVSNQENNDVPP 435

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  422 KEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKE-------PAPTTPKKPVPTTPKE-PAPTTPKEPAPTTTKSAPTTTKE 493
Cdd:PRK08691   436 WEDAPDEAQTAAGTAQTSAKSIQTASEAETPPEnqvsknkAADNETDAPLSEVPSEnPIQATPNDEAVETETFAHEAPAE 515

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  494 PAPTTTKSAPTTPKEPAPTAPKKP-APTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKE 555
Cdd:PRK08691   516 PFYGYGFPDNDCPPEDGAEIPPPDwEHAAPADTAGGGADEEAEAGGIGGNNTPSAPPPEFSTE 578

PRK12323

DNA polymerase III subunit gamma/tau;

439-645

2.64e-09

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 61.82 E-value: 2.64e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  439 EPAPTTTKSAPTTPKEPA--PTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKk 516
Cdd:PRK12323   371 GAGPATAAAAPVAQPAPAaaAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPA- 449

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  517 PAPTTPKEPAPTTPKEPAPtttksapttpkePSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKP 596
Cdd:PRK12323   450 PAPAPAAAPAAAARPAAAG------------PRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAA 517

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 2468437868  597 APTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPA 645
Cdd:PRK12323   518 PAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPP 566

PRK07994

DNA polymerase III subunits gamma and tau; Validated

416-582

3.52e-09

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 61.42 E-value: 3.52e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  416 PAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAptttksaptttkePA 495
Cdd:PRK07994   361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAA-------------RQ 427

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  496 PTTTKSAPTTPKEPAPTAPKKPAPtTPKEPAPTTPKEPAPTTTKSAPtTPKEPSPTTTKEPAPTtpKEPAPTTPKKPAPT 575
Cdd:PRK07994   428 QLQRAQGATKAKKSEPAAASRARP-VNSALERLASVRPAPSALEKAP-AKKEAYRWKATNPVEV--KKEPVATPKALKKA 503


                   ....*..
gi 2468437868  576 TPKETAP 582
Cdd:PRK07994   504 LEHEKTP 510

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

348-479

3.95e-09

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 61.27 E-value: 3.95e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  348 PTTPKEPAPTTTKSAPTTPMEPAPTtPKEPAPTTTKSAPTTPmePAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPT 427
Cdd:PRK14951   366 PAAAAEAAAPAEKKTPARPEAAAPA-AAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAP 442

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  428 TTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPkEPAPTTPKEP 479
Cdd:PRK14951   443 AAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAP-AAARLTPTEE 493

PRK14948

DNA polymerase III subunit gamma/tau;

405-587

4.42e-09

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 61.13 E-value: 4.42e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  405 PKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPttpkePAPTTPKKPVPTTPKEPAPTTPKEPAPTTT 484
Cdd:PRK14948   363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPP-----PAKASPPIPVPAEPTEPSPTPPANAANAPP 437

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  485 KSAPTTTKE------PAPTT-------------TKSAPT-----------------------------------TPKEPA 510
Cdd:PRK14948   438 SLNLEELWQqilaklELPSTrmllsqqaelvslDSNRAViavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSA 517

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  511 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKE 587
Cdd:PRK14948   518 SNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594

PRK12323

DNA polymerase III subunit gamma/tau;

292-506

5.05e-09

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 61.05 E-value: 5.05e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  292 PETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTtPKEPAPTTTKSAPTTPMEPAP 371
Cdd:PRK12323   374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPE-ALAAARQASARGPGGAPAPAP 452

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  372 TTPKEPAPTttksAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPtTPKEPAPTTTKSAPTT 451
Cdd:PRK12323   453 APAAAPAAA----ARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAP-AQPDAAPAGWVAESIP 527

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2468437868  452 PKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTP 506
Cdd:PRK12323   528 DPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGDWP 582

Not5

COG5665

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

346-648

5.33e-09

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 60.83 E-value: 5.33e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  346 PAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTtpmepaPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPA 425
Cdd:COG5665    245 TPPATPATEEKSSQQPKSQPTSPSGGTTPPSTNQLTTSNTPT------STAKAQPQPPTKKQPAKEPPSDTASGNPSAPS 318

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  426 PTTtkepAPTTPkEPAPTTTKSAPTTPKEPAPTTPKKpVPTTPKEPA-PTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPT 504
Cdd:COG5665    319 VLI----NSDSP-TSEDPATASVPTTEETTAFTTPSS-VPSTPAEKDtPATDLATPVSPTPPETSVDKKVSPDSATSSTK 392

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  505 TPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTT 584
Cdd:COG5665    393 SEKEGGTASSPMPPNIAIGAKDDVDATDPSQEAKEYTKNAPMTPEADSAPESSVRTEASPSAGSDLEPENTTLRDPAPNA 472

                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2468437868  585 PKEPAPTTTKKPAPTTPKEPAPTTPkeTAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTT 648
Cdd:COG5665    473 IPPPEDPSTIGRLSSGDKLANETGP--PVIRRDSTPSSTADQSIVGVLAFGLDQRTQAEISVEA 534

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

346-448

6.25e-09

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 60.59 E-value: 6.25e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  346 PAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAP----TTPKEPAPTTPKEPAPTTP 421
Cdd:PRK14950   345 SYGQLPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEpvreTATPPPVPPRPVAPPVPHT 424

                           90       100
                   ....*....|....*....|....*....
gi 2468437868  422 KEPAPTTTKE--PAPTTPKEPAPTTTKSA 448
Cdd:PRK14950   425 PESAPKLTRAaiPVDEKPKYTPPAPPKEE 453

PRK12323

DNA polymerase III subunit gamma/tau;

384-633

6.36e-09

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 60.66 E-value: 6.36e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  384 SAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTtPKEPAPTTTKSAPTTPKEPAPTTPKkP 463
Cdd:PRK12323   373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPA-RRSPAPEALAAARQASARGPGGAPA-P 450

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  464 VPTTPKEPAPTTPKEPAPTttksaptttkePAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAP- 542
Cdd:PRK12323   451 APAPAAAPAAAARPAAAGP-----------RPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPa 519

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  543 --TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPketapttpkepaptttkkpapttpKEP--APTTPKETAPTTPE 618
Cdd:PRK12323   520 gwVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAA------------------------TEPvvAPRPPRASASGLPD 575

                          250
                   ....*....|....*
gi 2468437868  619 KLTPTTPEkLAPTTP 633
Cdd:PRK12323   576 MFDGDWPA-LAARLP 589

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

330-460

7.00e-09

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 60.50 E-value: 7.00e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  330 SAPTTPKEPAPTTPKEPAPTTPkEPAPTTTKSAPTTPMEPAPTTPKEPAptttksAPTTPMEPAPTTPKKPAPTTPKEPA 409
Cdd:PRK14951   368 AAAEAAAPAEKKTPARPEAAAP-AAAPVAQAAAAPAPAAAPAAAASAPA------APPAAAPPAPVAAPAAAAPAAAPAA 440

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2468437868  410 PTTPKEPAPTTPKEPAPTTTKEPAPTTPkEPAPTTTKSAPTTPKEPAPTTP 460
Cdd:PRK14951   441 APAAVALAPAPPAQAAPETVAIPVRVAP-EPAVASAAPAPAAAPAAARLTP 490

PLN03209

translocon at the inner envelope of chloroplast subunit 62; Provisional

384-640

7.76e-09

translocon at the inner envelope of chloroplast subunit 62; Provisional

Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 59.94 E-value: 7.76e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  384 SAPTTPMEPAPTT-----PKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPT 458
Cdd:PLN03209   310 TAPLTPMEELLAKipsqrVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPYTAYEDLKPPTSPIPT 389

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  459 TPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPkEPAPTTPKEPAPTTT 538
Cdd:PLN03209   390 PPSSSPASSKSVDAVAKPAEPDVVPSPGSASNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSP-SPTAPTGVSPSVSST 468

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  539 KSAPTTPKEPSPT-----TTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETA 613
Cdd:PLN03209   469 SSVPAVPDTAPATaatdaAAPPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHA 548

                          250       260
                   ....*....|....*....|....*...
gi 2468437868  614 PTTPEKLTP-TTPEKLAPTTPEEPAPTT 640
Cdd:PLN03209   549 QPKPRPLSPyTMYEDLKPPTSPTPSPVL 576

PRK14948

DNA polymerase III subunit gamma/tau;

389-572

7.85e-09

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 59.98 E-value: 7.85e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  389 PMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTkePAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTP 468
Cdd:PRK14948   363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATT--PSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  469 KEPA----------PTT-------------------------------PKEPAPTTTKSAP---------TTTKEPAPTT 498
Cdd:PRK14948   441 LEELwqqilaklelPSTrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQAFAKVlgrsiklnlESQSGSASNT 520

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2468437868  499 TKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP 572
Cdd:PRK14948   521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

354-446

8.08e-09

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 60.67 E-value: 8.08e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  354 PAPTTTKSAPTTPMEPAPTTPkEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPA 433
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAP-AAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116

                           90
                   ....*....|...
gi 2468437868  434 PTTPKEPAPTTTK 446
Cdd:PRK12270   117 VTPLRGAAAAVAK 129

PRK07994

DNA polymerase III subunits gamma and tau; Validated

351-519

8.19e-09

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 60.26 E-value: 8.19e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  351 PKEPAPTTtkSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTP-KEPAPTTPKEPAPTTT 429
Cdd:PRK07994   361 PAAPLPEP--EVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQlLAARQQLQRAQGATKA 438

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  430 KEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPttPKEPAPTTPKEPAPTTTKSaptttkEPAPTTTKSAPTtpKEP 509
Cdd:PRK07994   439 KKSEPAAASRARPVNSALERLASVRPAPSALEKAPA--KKEAYRWKATNPVEVKKEP------VATPKALKKALE--HEK 508

                          170
                   ....*....|
gi 2468437868  510 APTAPKKPAP 519
Cdd:PRK07994   509 TPELAAKLAA 518

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

386-748

8.62e-09

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 60.17 E-value: 8.62e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  386 PTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPT--TPKEPAPTTPKKP 463
Cdd:pfam03154  172 PVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTlhPQRLPSPHPPLQP 251

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  464 VPttpkePAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPT 543
Cdd:pfam03154  252 MT-----QPPPPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIH 326

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  544 TPKEPSPTTTKEPAPTTPKEPAPTT------------PKKPAPTTPKETAPTTPKEPAPTTT--KKPAPTTPKEPAPTTP 609
Cdd:pfam03154  327 TPPSQSQLQSQQPPREQPLPPAPLSmphikpppttpiPQLPNPQSHKHPPHLSGPSPFQMNSnlPPPPALKPLSSLSTHH 406

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  610 KETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTP 689
Cdd:pfam03154  407 PPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPPTSTS 486

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  690 KEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPT 748
Cdd:pfam03154  487 SAMPGIQPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPPPPRSPSPEPT 545

PRK07764

DNA polymerase III subunits gamma and tau; Validated

298-479

9.22e-09

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 60.00 E-value: 9.22e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  298 GPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEP 377
Cdd:PRK07764   599 GPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAP 678

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  378 APTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPT--TPKEPAPTTTKSAPTTPKEP 455
Cdd:PRK07764   679 AAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADdpVPLPPEPDDPPDPAGAPAQP 758

                          170       180
                   ....*....|....*....|....
gi 2468437868  456 APTTPKKPVPTTPKEPAPTTPKEP 479
Cdd:PRK07764   759 PPPPAPAPAAAPAAAPPPSPPSEE 782

PRK07764

DNA polymerase III subunits gamma and tau; Validated

329-544

9.22e-09

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 60.00 E-value: 9.22e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  329 KSAPTTPKEPAPTTPKEPApttpkEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEP 408
Cdd:PRK07764   604 ASSGPPEEAARPAAPAAPA-----APAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAP 678

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  409 APTTPKePAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPaptttksap 488
Cdd:PRK07764   679 AAPPPA-PAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDP--------- 748

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 2468437868  489 tTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTT 544
Cdd:PRK07764   749 -PDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEE 803

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

194-586

9.39e-09

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 60.17 E-value: 9.39e-09

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  194 DTSTTQHNKVTTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKT 273
Cdd:pfam03154  159 DSSAQQQILQTQPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLH 238

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  274 SAKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPtpttpkepastTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKE 353
Cdd:pfam03154  239 PQRLPSPHPPLQPMTQPPPPSQVSPQPLPQPSLH-----------GQMPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQS 307

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  354 PAPTTTKSAPTTPMEPAPTTP-KEPAPTTTKSAPTTPMEPAPTTPK--KPAPTTPkepaptTPKEPAPTTPKEPAPTTTK 430
Cdd:pfam03154  308 QVPPGPSPAAPGQSQQRIHTPpSQSQLQSQQPPREQPLPPAPLSMPhiKPPPTTP------IPQLPNPQSHKHPPHLSGP 381

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  431 EPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPK-EPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 509
Cdd:pfam03154  382 SPFQMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQsQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSP 461

                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  510 APTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPK 586
Cdd:pfam03154  462 FPQHPFVPGGPPPITPPSGPPTSTSSAMPGIQPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPPPPR 538

Hemopexin

pfam00045

Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1232-1274

1.09e-08

Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 52.18 E-value: 1.09e-08

                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 2468437868 1232 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPI--FKGFG 1274
Cdd:pfam00045    1 IDAAFEDRD--GKTYFFKGRKYWRFDPQRVEPGYPKLIsdFPGLP 43

PHA03307

transcriptional regulator ICP4; Provisional

296-642

1.25e-08

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 59.80 E-value: 1.25e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  296 TKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPT---TPKEPAPTTPKEPAPtttksaptTPMEPAPT 372
Cdd:PHA03307    58 GAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREgspTPPGPSSPDPPPPTP--------PPASPPPS 129

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  373 TPKEPAPTTTKSAPTTPmEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPtttkEPAPTTPKEPAPTTTKSAPTTP 452
Cdd:PHA03307   130 PAPDLSEMLRPVGSPGP-PPAASPPAAGASPAAVASDAASSRQAALPLSSPEET----ARAPSSPPAEPPPSTPPAAASP 204

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  453 KEPApttPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTpkEPAPTAPKKPAPTTPKEPAPTTPKE 532
Cdd:PHA03307   205 RPPR---RSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENE--CPLPRPAPITLPTRIWEASGWNGPS 279

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  533 PAPTTTKSApTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKET 612
Cdd:PHA03307   280 SRPGPASSS-SSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPP 358

                          330       340       350
                   ....*....|....*....|....*....|
gi 2468437868  613 APTTPEKLTPTTPEKLAPTTPEEPAPTTPE 642
Cdd:PHA03307   359 PADPSSPRKRPRPSRAPSSPAASAGRPTRR 388

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

390-480

1.39e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 59.90 E-value: 1.39e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  390 MEPAPTTPKKPAPTTPKEPAPTTPkePAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPK 469
Cdd:PRK12270    36 YGPGSTAAPTAAAAAAAAAASAPA--AAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113

                           90
                   ....*....|.
gi 2468437868  470 EPAPTTPKEPA 480
Cdd:PRK12270   114 EDEVTPLRGAA 124

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

496-580

1.55e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 59.52 E-value: 1.55e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  496 PTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTttksAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 575
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAA----APAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113


                   ....*
gi 2468437868  576 TPKET 580
Cdd:PRK12270   114 EDEVT 118

PHA03378

EBNA-3B; Provisional

347-583

1.79e-08

EBNA-3B; Provisional

Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 59.31 E-value: 1.79e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  347 APTTPKEPAPTTTKSAPTTPmepaPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAP 426
Cdd:PHA03378   589 APSYAQTPWPVPHPSQTPEP----PTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITFNVLVFPTPHQPPQVEITPYKP 664

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  427 TTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTP 506
Cdd:PHA03378   665 TWTQIGHIPYQPSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRA 744

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  507 KEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPT 583
Cdd:PHA03378   745 RPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQGPT 821

PRK07994

DNA polymerase III subunits gamma and tau; Validated

408-558

1.89e-08

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 59.11 E-value: 1.89e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  408 PAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVpttPKEPAPTTPKEPAPTTTKSA 487
Cdd:PRK07994   366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQL---LAARQQLQRAQGATKAKKSE 442

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2468437868  488 PTTTKEPAPTTTKSAPTTPKEPAPTAPkkPAPTTPKEPAPTTPKEPAPTTTKSApTTPKEPSPTTTKEPAP 558
Cdd:PRK07994   443 PAAASRARPVNSALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEVKKEPV-ATPKALKKALEHEKTP 510

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

371-452

2.03e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 59.13 E-value: 2.03e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  371 PTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPT 450
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117


                   ..
gi 2468437868  451 TP 452
Cdd:PRK12270   118 TP 119

rne

PRK10811

ribonuclease E; Reviewed

316-480

2.16e-08

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 58.90 E-value: 2.16e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  316 ASTTPKEPTATTIKSAPTTpkEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTpKEPAPTTTKSAPTtpmepAPT 395
Cdd:PRK10811   870 VAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVT-EQPQVITESDVAV-----AQE 941

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  396 TPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPV--------PTT 467
Cdd:PRK10811   942 VAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATvehnhataPMT 1021

                          170
                   ....*....|...
gi 2468437868  468 pKEPAPTTPKEPA 480
Cdd:PRK10811  1022 -RAPAPEYVPEAP 1033

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

399-527

2.16e-08

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 58.57 E-value: 2.16e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  399 KP--APTTPKEPAPTTPKEPAPTTP-KEPAPTTTKEPAPTtpkePAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTT 475
Cdd:PRK14951   365 KPaaAAEAAAPAEKKTPARPEAAAPaAAPVAQAAAAPAPA----AAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAA 440

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  476 PKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAP 527
Cdd:PRK14951   441 APAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

353-427

2.25e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 59.13 E-value: 2.25e-08

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2468437868  353 EPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPT 427
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

323-457

2.34e-08

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 58.57 E-value: 2.34e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  323 PTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPtttkSAPTTPMEPAPTTPKKPAP 402
Cdd:PRK14951   366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAP----PAPVAAPAAAAPAAAPAAA 441

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2468437868  403 TTPKEPAPTTPKEPAPTTPKEPaPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAP 457
Cdd:PRK14951   442 PAAVALAPAPPAQAAPETVAIP-VRVAPEPAVASAAPAPAAAPAAARLTPTEEGD 495

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

358-449

2.49e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 58.75 E-value: 2.49e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  358 TTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPmEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTP 437
Cdd:PRK12270    34 ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAK-APAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAA 112

                           90
                   ....*....|..
gi 2468437868  438 KEPAPTTTKSAP 449
Cdd:PRK12270   113 VEDEVTPLRGAA 124

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

339-423

2.51e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 58.75 E-value: 2.51e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  339 APTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPtttksAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAP 418
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAA-----APAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAA 112


                   ....*
gi 2468437868  419 TTPKE 423
Cdd:PRK12270   113 VEDEV 117

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

374-457

2.64e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 58.75 E-value: 2.64e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  374 PKEPAPTTTKSAPTTPmePAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPK 453
Cdd:PRK12270    38 PGSTAAPTAAAAAAAA--AASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVED 115


                   ....
gi 2468437868  454 EPAP 457
Cdd:PRK12270   116 EVTP 119

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

330-417

2.68e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 58.75 E-value: 2.68e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  330 SAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPA 409
Cdd:PRK12270    37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116


                   ....*...
gi 2468437868  410 PTTPKEPA 417
Cdd:PRK12270   117 VTPLRGAA 124

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

495-587

2.73e-08

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 58.28 E-value: 2.73e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  495 APTTTKSAPTTPKEPAPTAPkKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTttkEPAPTTPKEPAPTTPKK--P 572
Cdd:PRK14950   362 PVPAPQPAKPTAAAPSPVRP-TPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPV---APPVPHTPESAPKLTRAaiP 437

                           90
                   ....*....|....*
gi 2468437868  573 APTTPKETAPTTPKE 587
Cdd:PRK14950   438 VDEKPKYTPPAPPKE 452

PRK14948

DNA polymerase III subunit gamma/tau;

316-479

2.80e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 58.44 E-value: 2.80e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  316 ASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPkEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTP------ 389
Cdd:PRK14948   367 EIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT-TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLnleelw 445

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  390 ------MEPaPTT------------------------------------------------------PKKPAPTTPKEPA 409
Cdd:PRK14948   446 qqilakLEL-PSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAKTP 524

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  410 PTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEP 479
Cdd:PRK14948   525 PPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

347-433

3.00e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 58.75 E-value: 3.00e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  347 APTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAP 426
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117


                   ....*..
gi 2468437868  427 TTTKEPA 433
Cdd:PRK12270   118 TPLRGAA 124

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

437-587

3.15e-08

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 58.19 E-value: 3.15e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  437 PKEPAPTTTKSAPTTPKEPAPTTP-KKPVPTTPKEPAPTtpkepaptttksaptttkePAPTTTKSAPTTPKEPAPTAPK 515
Cdd:PRK14951   366 PAAAAEAAAPAEKKTPARPEAAAPaAAPVAQAAAAPAPA-------------------AAPAAAASAPAAPPAAAPPAPV 426

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  516 KPAPTTPKEPAPttpkEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPkEPAPTTPKKPAPTTPKETAPTTPKE 587
Cdd:PRK14951   427 AAPAAAAPAAAP----AAAPAAVALAPAPPAQAAPETVAIPVRVAP-EPAVASAAPAPAAAPAAARLTPTEE 493

PLN03209

translocon at the inner envelope of chloroplast subunit 62; Provisional

316-570

3.63e-08

translocon at the inner envelope of chloroplast subunit 62; Provisional

Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 58.01 E-value: 3.63e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  316 ASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTT-PKEPAPTTTKSAPTTPMEPAP 394
Cdd:PLN03209   311 APLTPMEELLAKIPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVPrPLSPYTAYEDLKPPTSPIPTP 390

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  395 TTPKKPAPTT------PKEPAPTTPKEPAPTTP-KEPAPTTTKEPAPTTP----KEPAPTTTKSaPTTPKEPAPTTPKKP 463
Cdd:PLN03209   391 PSSSPASSKSvdavakPAEPDVVPSPGSASNVPeVEPAQVEAKKTRPLSPyaryEDLKPPTSPS-PTAPTGVSPSVSSTS 469

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  464 -VPTTPKEPAPTTPKEPAPTTTKSAPTTTkePAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAP 542
Cdd:PLN03209   470 sVPAVPDTAPATAATDAAAPPPANMRPLS--PYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHH 547

                          250       260       270
                   ....*....|....*....|....*....|
gi 2468437868  543 TTPKEP--SPTTTKEPApTTPKEPAPTTPK 570
Cdd:PLN03209   548 AQPKPRplSPYTMYEDL-KPPTSPTPSPVL 576

PRK07764

DNA polymerase III subunits gamma and tau; Validated

295-510

3.65e-08

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 58.07 E-value: 3.65e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  295 TTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPkePAPTTPKEPAPTTPKEPAPTTTksAPTTPMEPAPTTP 374
Cdd:PRK07764   590 PAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPA--GAAAAPAEASAAPAPGVAAPEH--HPKHVAVPDASDG 665

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  375 KEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKE 454
Cdd:PRK07764   666 GDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEP 745

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 2468437868  455 PAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPA 510
Cdd:PRK07764   746 DDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDA 801

PRK07994

DNA polymerase III subunits gamma and tau; Validated

496-653

4.01e-08

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 57.95 E-value: 4.01e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  496 PTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPA----PTTPKEPAPTTPKK 571
Cdd:PRK07994   361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLlaarQQLQRAQGATKAKK 440

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  572 PAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEkltptTPEKLAPTTPEEPAPTTPEEPaptTPEE 651
Cdd:PRK07994   441 SEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPV-----EVKKEPVATPKALKKALEHEK---TPEL 512


                   ..
gi 2468437868  652 PA 653
Cdd:PRK07994   513 AA 514

PRK07003

DNA polymerase III subunit gamma/tau;

275-527

4.25e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 57.94 E-value: 4.25e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  275 AKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKePAPTTPKEP 354
Cdd:PRK07003   393 ASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSR-CDERDAQPP 471

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  355 APTTTKSAPTTPMEPAPttPKEPAPTTTKSAPTTPMEPAPTTPKKPAPtTPKEPAPttPKEPAPTTPkEPAPTTTKEPAP 434
Cdd:PRK07003   472 ADSGSASAPASDAPPDA--AFEPAPRAAAPSAATPAAVPDARAPAAAS-REDAPAA--AAPPAPEAR-PPTPAAAAPAAR 545

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  435 TTPKEPAPTTTKSAP---TTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAptttksaptttkePAPTTTKSAPTTPKEPAP 511
Cdd:PRK07003   546 AGGAAAALDVLRNAGmrvSSDRGARAAAAAKPAAAPAAAPKPAAPRVAV-------------QVPTPRARAATGDAPPNG 612

                          250
                   ....*....|....*.
gi 2468437868  512 TAPKKPAPTTPKEPAP 527
Cdd:PRK07003   613 AARAEQAAESRGAPPP 628

rne

PRK10811

ribonuclease E; Reviewed

394-575

6.89e-08

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 57.36 E-value: 6.89e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  394 PTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAP 473
Cdd:PRK10811   846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVT 925

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  474 TTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTP-KEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTT 552
Cdd:PRK10811   926 EQPQVITESDVAVAQEVAEHAEPVVEPQDETADiEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQ 1005

                          170       180
                   ....*....|....*....|...
gi 2468437868  553 TKEPAPTTPKEPAPTTpKKPAPT 575
Cdd:PRK10811  1006 VPEATVEHNHATAPMT-RAPAPE 1027

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

367-456

7.09e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 57.59 E-value: 7.09e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  367 MEPAPTTPKEPAPTTTKSAPTTPmEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTK 446
Cdd:PRK12270    36 YGPGSTAAPTAAAAAAAAAASAP-AAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVE 114

                           90
                   ....*....|
gi 2468437868  447 SAPTTPKEPA 456
Cdd:PRK12270   115 DEVTPLRGAA 124

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

494-573

7.09e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 57.59 E-value: 7.09e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  494 PAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA 573
Cdd:PRK12270    45 TAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTPLRGAA 124

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

442-542

7.79e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 57.21 E-value: 7.79e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  442 PTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAptttksaptttkepaptttKSAPTTPKEPAPTAPKKPAPTT 521
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPA-------------------AAAPAAPPKPAAAAAAAAAPAA 98

                           90       100
                   ....*....|....*....|.
gi 2468437868  522 PKEPAPTTPKEPAPTTTKSAP 542
Cdd:PRK12270    99 PPAAAAAAAPAAAAVEDEVTP 119

PRK07003

DNA polymerase III subunit gamma/tau;

407-652

8.61e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 57.17 E-value: 8.61e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  407 EPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKS 486
Cdd:PRK07003   359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  487 APTTTKEPAPTTTKS---APTTPKEPAPTAPKKPAPTTPKEPAPTTP----KEPAPTTTKSAPTTPKEPSPTTTKEPAPt 559
Cdd:PRK07003   439 GDDAADGDAPVPAKAnarASADSRCDERDAQPPADSGSASAPASDAPpdaaFEPAPRAAAPSAATPAAVPDARAPAAAS- 517

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  560 TPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTK---------------KPAPTTPKEPAPTTPKETAPTTPEKLTPT- 623
Cdd:PRK07003   518 REDAPAAAAPPAPEARPPTPAAAAPAARAGGAAAAldvlrnagmrvssdrGARAAAAAKPAAAPAAAPKPAAPRVAVQVp 597

                          250       260
                   ....*....|....*....|....*....
gi 2468437868  624 TPEKLAPTTPEEPAPTTPEEPAPTTPEEP 652
Cdd:PRK07003   598 TPRARAATGDAPPNGAARAEQAAESRGAP 626

PRK07994

DNA polymerase III subunits gamma and tau; Validated

366-527

8.64e-08

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 56.80 E-value: 8.64e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  366 PMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPttpkEPAPTTTKEPAPTTPKEPAPTTT 445
Cdd:PRK07994   361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAV----PLPETTSQLLAARQQLQRAQGAT 436

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  446 ksaPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAptttkEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEP 525
Cdd:PRK07994   437 ---KAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAK-----KEAYRWKATNPVEVKKEPVATPKALKKALEHEK 508


                   ..
gi 2468437868  526 AP 527
Cdd:PRK07994   509 TP 510

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

379-460

9.14e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 57.21 E-value: 9.14e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  379 PTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPT 458
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117


                   ..
gi 2468437868  459 TP 460
Cdd:PRK12270   118 TP 119

rne

PRK10811

ribonuclease E; Reviewed

318-510

1.08e-07

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 56.97 E-value: 1.08e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  318 TTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTtKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTP 397
Cdd:PRK10811   848 VRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV-EAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTE 926

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  398 KKPAPTTPKEP-APTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTP------KKPVPTTPKE 470
Cdd:PRK10811   927 QPQVITESDVAvAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEvetvtaVEPEVAPAQV 1006

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|
gi 2468437868  471 PAPTTPKEPAPtttksaptttkepAPTTTKSAPTTPKEPA 510
Cdd:PRK10811  1007 PEATVEHNHAT-------------APMTRAPAPEYVPEAP 1033

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

316-390

1.14e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 56.82 E-value: 1.14e-07

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2468437868  316 ASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPM 390
Cdd:PRK12270    46 AAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTPL 120

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

417-524

1.19e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 56.36 E-value: 1.19e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  417 APTTPKEPAPTTTKEPAPTTPKePAPTTtksaPTTPKEPAPTTPKKPVPTTPkePAPTTPKEPAPTttksaptttkePAP 496
Cdd:PRK14950   361 VPVPAPQPAKPTAAAPSPVRPT-PAPST----RPKAAAAANIPPKEPVRETA--TPPPVPPRPVAP-----------PVP 422

                           90       100       110
                   ....*....|....*....|....*....|
gi 2468437868  497 TTTKSAPTTPKE--PAPTAPKKPAPTTPKE 524
Cdd:PRK14950   423 HTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

PRK14948

DNA polymerase III subunit gamma/tau;

366-533

1.31e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 56.12 E-value: 1.31e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  366 PMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKP---APTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKE--- 439
Cdd:PRK14948   363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTkqaATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLnle 442

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  440 ----------PAPTT-------------TKSAPT-----------------------------------TPKEPAPTTPK 461
Cdd:PRK14948   443 elwqqilaklELPSTrmllsqqaelvslDSNRAViavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAK 522

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  462 KPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 533
Cdd:PRK14948   523 TPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594

PRK07994

DNA polymerase III subunits gamma and tau; Validated

299-460

1.60e-07

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 56.03 E-value: 1.60e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  299 PALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPA 378
Cdd:PRK07994   361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKK 440

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  379 PTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPttTKEPAPTTPKEPaptttKSAPTTPKEPAPT 458
Cdd:PRK07994   441 SEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVE--VKKEPVATPKAL-----KKALEHEKTPELA 513


                   ..
gi 2468437868  459 TP 460
Cdd:PRK07994   514 AK 515

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

316-415

1.89e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 55.59 E-value: 1.89e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  316 ASTTPKEPTATtiksAPTTPKEPAPTTPKePAPTTPkePAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPT 395
Cdd:PRK14950   358 ALLVPVPAPQP----AKPTAAAPSPVRPT-PAPSTR--PKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPK 430

                           90       100
                   ....*....|....*....|..
gi 2468437868  396 TPKK--PAPTTPKEPAPTTPKE 415
Cdd:PRK14950   431 LTRAaiPVDEKPKYTPPAPPKE 452

PLN03209

translocon at the inner envelope of chloroplast subunit 62; Provisional

433-652

2.01e-07

translocon at the inner envelope of chloroplast subunit 62; Provisional

Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 55.70 E-value: 2.01e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  433 APTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEpaptttksaptTTKEPAPTTTKSAPTTPKepapT 512
Cdd:PLN03209   311 APLTPMEELLAKIPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPI-----------EEEPPQPKAVVPRPLSPY----T 375

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  513 APKKPAPTTPKEPAPTTPKEPAPTTTKSApTTPKEPSPTTTKEPAPTTP-KEPAPTTPKKPAPTTPKET-----APTTPK 586
Cdd:PLN03209   376 AYEDLKPPTSPIPTPPSSSPASSKSVDAV-AKPAEPDVVPSPGSASNVPeVEPAQVEAKKTRPLSPYARyedlkPPTSPS 454

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2468437868  587 EPAPTTTKKPAPTTPKEPA------PTTPKETAPTTPEKLTPTTP----EKLAPTTPEEPAPTTPEEPAPTTPEEP 652
Cdd:PLN03209   455 PTAPTGVSPSVSSTSSVPAvpdtapATAATDAAAPPPANMRPLSPyavyDDLKPPTSPSPAAPVGKVAPSSTNEVV 530

PRK07994

DNA polymerase III subunits gamma and tau; Validated

522-694

2.05e-07

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 55.64 E-value: 2.05e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  522 PKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTP 601
Cdd:PRK07994   361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKK 440

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  602 KEPAPTTPKETAPTTPEKLTPTTPEklAPTTPEEPAPTTPEEPAPTTPEEpapttleeptpttpeepapttPKTAAPNTP 681
Cdd:PRK07994   441 SEPAAASRARPVNSALERLASVRPA--PSALEKAPAKKEAYRWKATNPVE---------------------VKKEPVATP 497

                          170
                   ....*....|...
gi 2468437868  682 KEPAPTTPKEPAP 694
Cdd:PRK07994   498 KALKKALEHEKTP 510

PRK12323

DNA polymerase III subunit gamma/tau;

493-705

2.13e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 55.65 E-value: 2.13e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  493 EPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP 572
Cdd:PRK12323   371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAP 450

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  573 APTTPKETAPTtpkepaptttKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAP--TTPEEPAPTTPEEPAPTTPE 650
Cdd:PRK12323   451 APAPAAAPAAA----------ARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPweELPPEFASPAPAQPDAAPAG 520

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2468437868  651 EPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKePAPTTPKETAPTTP 705
Cdd:PRK12323   521 WVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPV-VAPRPPRASASGLP 574

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

386-472

2.40e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 55.67 E-value: 2.40e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  386 PTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVP 465
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117


                   ....*..
gi 2468437868  466 TTPKEPA 472
Cdd:PRK12270   118 TPLRGAA 124

DUF5585

pfam17823

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

333-724

2.61e-07

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 54.97 E-value: 2.61e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  333 TTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTT 412
Cdd:pfam17823   54 SSEQ*NFCAATAAPAPVTLTKGTSAAHLNSTEVTAEHTPHGTDLSEPATREGAADGAASRALAAAASSSPSSAAQSLPAA 133

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  413 PKepAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTK 492
Cdd:pfam17823  134 IA--ALPSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARG 211

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  493 EPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE----PAPTT 568
Cdd:pfam17823  212 ISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARRLSPakhmPSDTM 291

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  569 PKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTT 648
Cdd:pfam17823  292 ARNPAAPMGAQAQGPIIQVSTDQPVHNTAGEPTPSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASPVPVLHTSMI 371

                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2468437868  649 PEEPAPttleeptpttpeepapttpktaAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKP 724
Cdd:pfam17823  372 PEVEAT----------------------SPTTQPSPLLPTQGAAGPGILLAPEQVATEATAGTASAGPTPRSSGDP 425

rne

PRK10811

ribonuclease E; Reviewed

511-693

2.90e-07

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 55.43 E-value: 2.90e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  511 PTAPKKPAPTTPKEPAPTTPKEPA-PTTTKSAPTTPKEPSPTTtkEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPA 589
Cdd:PRK10811   846 PVVRPQDVQVEEQREAEEVQVQPVvAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAP 923

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  590 PTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEPA-PTTPEEPAPTTPEEPAPTTLEEPTPTTPEEP 668
Cdd:PRK10811   924 VTEQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAePEVVAQPAAPVVAEVAAEVETVTAVEPEVAP 1003

                          170       180       190
                   ....*....|....*....|....*....|.
gi 2468437868  669 APTTPKTA------APNTpKEPAPTTPKEPA 693
Cdd:PRK10811  1004 AQVPEATVehnhatAPMT-RAPAPEYVPEAP 1033

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

401-495

2.99e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 54.82 E-value: 2.99e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  401 APTTPKEPAPTTPKEPAPTTPKePAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPkkPVPTTPkEPAPTTPKEPA 480
Cdd:PRK14950   361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAP--PVPHTP-ESAPKLTRAAI 436

                           90
                   ....*....|....*
gi 2468437868  481 PTTTKSAPTTTKEPA 495
Cdd:PRK14950   437 PVDEKPKYTPPAPPK 451

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

368-479

3.23e-07

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 50.82 E-value: 3.23e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  368 EPAPTTPKEPAPTTTKSaPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKS 447
Cdd:pfam02389    7 QPCQPPPQEPCVPTTKE-PCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVPEPCSPKV 85

                           90       100       110
                   ....*....|....*....|....*....|...
gi 2468437868  448 A-PTTPKEPAPTTPKKPVPTTPKEPAPTTPKEP 479
Cdd:pfam02389   86 PePCHPKAPEPCHPKVPEPCYPKAPEPCQPKVP 118

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

505-585

3.59e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 55.28 E-value: 3.59e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  505 TPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTT 584
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118


                   .
gi 2468437868  585 P 585
Cdd:PRK12270   119 P 119

PRK14948

DNA polymerase III subunit gamma/tau;

384-550

3.61e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 54.58 E-value: 3.61e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  384 SAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKK- 462
Cdd:PRK14948   366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEELw 445

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  463 -------PVPTT-------------------------------PKEP-------------------------APTTPKEP 479
Cdd:PRK14948   446 qqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqSRKPlleqafakvlgrsiklnlesqsgsaSNTAKTPP 525

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2468437868  480 APTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSP 550
Cdd:PRK14948   526 PPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSPEE 596

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

384-511

3.78e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 54.72 E-value: 3.78e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  384 SAPTTPMEPAPTTPKKPAPTTP-KEPAPTTPKEPAPTTPkePAPTTTKEPAPTTPKEPAPTTtkSAPTTPKEPAPTTPKK 462
Cdd:PRK14951   368 AAAEAAAPAEKKTPARPEAAAPaAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVA--APAAAAPAAAPAAAPA 443

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*....
gi 2468437868  463 PVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAP 511
Cdd:PRK14951   444 AVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492

PRK14948

DNA polymerase III subunit gamma/tau;

330-494

3.83e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 54.58 E-value: 3.83e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  330 SAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPmEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPA 409
Cdd:PRK14948   366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT-TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLNLEEL 444

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  410 ----------PTT-------------------------------------------------------PKEPAPTTPKEP 424
Cdd:PRK14948   445 wqqilaklelPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnlesQSGSASNTAKTP 524

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  425 APTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEP 494
Cdd:PRK14948   525 PPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

470-550

3.91e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.90 E-value: 3.91e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  470 EPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPS 549
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118


                   .
gi 2468437868  550 P 550
Cdd:PRK12270   119 P 119

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

509-587

4.63e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.90 E-value: 4.63e-07

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  509 PAPTAPKKPAPTTPKEPAPTTPkePAPTTTKSAPTTPKEPSPtttkePAPTTPKEPAPTTPKKPAPTTPKETAPTTPKE 587
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPA--AAPAAKAPAAPAPAPPAA-----AAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPA 109

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

316-431

4.69e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 54.34 E-value: 4.69e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  316 ASTTPKEPTATTIKSAPTtPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEP---APTTPKEPAPTTTKSAPTTPMEP 392
Cdd:PRK14951   377 EKKTPARPEAAAPAAAPV-AQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPaaaAPAAAPAAAPAAVALAPAPPAQA 455

                           90       100       110
                   ....*....|....*....|....*....|....*....
gi 2468437868  393 APTTPKKPAPTTPkEPAPTTPKEPAPTTPKEPAPTTTKE 431
Cdd:PRK14951   456 APETVAIPVRVAP-EPAVASAAPAPAAAPAAARLTPTEE 493

DUF5585

pfam17823

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

281-628

4.77e-07

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 54.20 E-value: 4.77e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  281 TSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIkSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTK 360
Cdd:pfam17823   87 TAEHTPHGTDLSEPATREGAADGAASRALAAAASSSPSSAAQSLPAAI-AALPSEAFSAPRAAACRANASAAPRAAIAAA 165

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  361 SAPTT----PMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPK-----------EPAPTTPKEPA 425
Cdd:pfam17823  166 SAPHAaspaPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAagtalaavgnsSPAAGTVTAAV 245

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  426 PTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTT--PKKPVPTTPKEPAPTTPKEPAPTTTKS---------APTTTKEP 494
Cdd:pfam17823  246 GTVTPAALATLAAAAGTVASAAGTINMGDPHARRlsPAKHMPSDTMARNPAAPMGAQAQGPIIqvstdqpvhNTAGEPTP 325

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  495 APTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTtpKEPSPTTTKEPAPTTPKEPAPTTPKKPAP 574
Cdd:pfam17823  326 SPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASPVPVLHTSMIPEV--EATSPTTQPSPLLPTQGAAGPGILLAPEQ 403

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|....
gi 2468437868  575 TTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKL 628
Cdd:pfam17823  404 VATEATAGTASAGPTPRSSGDPKTLAMASCQLSTQGQYLVVTTDPLTPALVDKM 457

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

494-579

5.00e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 54.43 E-value: 5.00e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  494 PAPTTTKSAPTTPK----EPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTksaPTTPKEPSPTTTKEPAPTTPKE--PAPT 567
Cdd:PRK14950   364 PAPQPAKPTAAAPSpvrpTPAPSTRPKAAAAANIPPKEPVRETATPPPV---PPRPVAPPVPHTPESAPKLTRAaiPVDE 440

                           90
                   ....*....|..
gi 2468437868  568 TPKKPAPTTPKE 579
Cdd:PRK14950   441 KPKYTPPAPPKE 452

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

323-407

5.39e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.51 E-value: 5.39e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  323 PTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPtttksAPTTPMEPAPTTPKKPAP 402
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAA-----APAAPPAAAAAAAPAAAA 112


                   ....*
gi 2468437868  403 TTPKE 407
Cdd:PRK12270   113 VEDEV 117

rne

PRK10811

ribonuclease E; Reviewed

540-725

5.76e-07

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 54.28 E-value: 5.76e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  540 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPkepaPTTTKKPAPTTPKEPAPTTPKETAPTTPEK 619
Cdd:PRK10811   844 RYPVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVE----AVAEVVEEPVVVAEPQPEEVVVVETTHPEV 919

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  620 LTPTTPEKLAPTTPEEP--APTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTP 697
Cdd:PRK10811   920 IAAPVTEQPQVITESDVavAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEP 999

                          170       180       190
                   ....*....|....*....|....*....|....*
gi 2468437868  698 KETAPTTPKG-------TAPTTlKEPAPTTPKKPA 725
Cdd:PRK10811  1000 EVAPAQVPEAtvehnhaTAPMT-RAPAPEYVPEAP 1033

Herpes_BLLF1

pfam05109

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...

273-649

6.75e-07

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.

Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 54.15 E-value: 6.75e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  273 TSAKDLAPTSKVLAKPTPKPETTTKGPAlttpkEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPK 352
Cdd:pfam05109  459 TAPASTGPTVSTADVTSPTPAGTTSGAS-----PVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPN 533

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  353 EPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPkepaptTPKEPAPTTPK-EPAPTTTKE 431
Cdd:pfam05109  534 ATSPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTSPTSAVTTP------TPNATSPTVGEtSPQANTTNH 607

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  432 PAPTTPKEPAPTTTKSAPTTpkepAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPT-----TP 506
Cdd:pfam05109  608 TLGGTSSTPVVTSPPKNATS----AVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDNSTSHMPLLTSAHPTggeniTQ 683

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  507 KEPAPTAPKKPAPTTPKePAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPA-PTTPKEPAPTTPKKPAPTTP--KETAPT 583
Cdd:pfam05109  684 VTPASTSTHHVSTSSPA-PRPGTTSQASGPGNSSTSTKPGEVNVTKGTPPKnATSPQAPSGQKTAVPTVTSTggKANSTT 762

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  584 TPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPT-TPEEPAPTTPEEPAPTTP 649
Cdd:pfam05109  763 GGKHTTGHGARTSTEPTTDYGGDSTTPRTRYNATTYLPPSTSSKLRPRwTFTSPPVTTAQATVPVPP 829

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

382-480

6.80e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 53.66 E-value: 6.80e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  382 TKSAPTTPMEPA-------PTTPKKPAPTTPKEPAPTTPKePAPTTPKEPAPTTTKEPAPTTPKEPAPTTTksaPTTPKE 454
Cdd:PRK14950   343 TTSYGQLPLELAvieallvPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVRETATPPPV---PPRPVA 418

                           90       100
                   ....*....|....*....|....*...
gi 2468437868  455 PAPTTPKKPVPTTPKE--PAPTTPKEPA 480
Cdd:PRK14950   419 PPVPHTPESAPKLTRAaiPVDEKPKYTP 446

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

416-496

8.73e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.74 E-value: 8.73e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  416 PAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPA 495
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118


                   .
gi 2468437868  496 P 496
Cdd:PRK12270   119 P 119

PRK12323

DNA polymerase III subunit gamma/tau;

533-725

8.88e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 53.73 E-value: 8.88e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  533 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKET 612
Cdd:PRK12323   374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPA 453

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  613 APTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEP 692
Cdd:PRK12323   454 PAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATAD 533

                          170       180       190
                   ....*....|....*....|....*....|...
gi 2468437868  693 APTTPKETAPTTPKGTAPTTLKEPAPTTPKKPA 725
Cdd:PRK12323   534 PDDAFETLAPAPAAAPAPRAAAATEPVVAPRPP 566

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

464-545

9.10e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.74 E-value: 9.10e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  464 VPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPT 543
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117


                   ..
gi 2468437868  544 TP 545
Cdd:PRK12270   118 TP 119

Chi1

COG3469

Chitinase [Carbohydrate transport and metabolism];

377-571

1.01e-06

Chitinase [Carbohydrate transport and metabolism];

Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 53.22 E-value: 1.01e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  377 PAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPkepAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPA 456
Cdd:COG3469     29 AASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTA---ASSTAATSSTTSTTATATAAAAAATSTSATLVATSTASGA 105

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  457 PTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPkepaPT 536
Cdd:COG3469    106 NTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGTTTTSTTTTTTSASTTP----SA 181

                          170       180       190
                   ....*....|....*....|....*....|....*
gi 2468437868  537 TTKSAPTTPKEPSPTTTKEPAPTTPKePAPTTPKK 571
Cdd:COG3469    182 TTTATATTASGATTPSATTTATTTGP-PTPGLPKH 215

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

432-548

1.22e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.89 E-value: 1.22e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  432 PAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKePAPTTPKEPAPTTTKsaptttkEPAPTTTKSAPTTPKEPAP 511
Cdd:PRK14950   345 SYGQLPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANI-------PPKEPVRETATPPPVPPRP 416

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 2468437868  512 TAPKKPaptTPKEPAPTTPKEPAPTTTKSAPTTPKEP 548
Cdd:PRK14950   417 VAPPVP---HTPESAPKLTRAAIPVDEKPKYTPPAPP 450

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

500-579

1.24e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.36 E-value: 1.24e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  500 KSAPTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE 579
Cdd:PRK12270    37 GPGSTAAPTAAAAAAAAAASAPA--AAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVE 114

PRK12323

DNA polymerase III subunit gamma/tau;

273-460

1.25e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 52.96 E-value: 1.25e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  273 TSAKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPkePAPTTPK 352
Cdd:PRK12323   393 AAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAAR--PAAAGPR 470

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  353 EPAPTttksAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEP 432
Cdd:PRK12323   471 PVAAA----AAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPA 546

                          170       180
                   ....*....|....*....|....*...
gi 2468437868  433 APTTPKEPAPTTTKSAPTTPKEPAPTTP 460
Cdd:PRK12323   547 AAPAPRAAAATEPVVAPRPPRASASGLP 574

PRK12323

DNA polymerase III subunit gamma/tau;

609-814

1.49e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 52.96 E-value: 1.49e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  609 PKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTT 688
Cdd:PRK12323   375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAP 454

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  689 PKEPAPTTPKETAPTTPKGTApttlkEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKETAPTTPEETAPTTPEE 768
Cdd:PRK12323   455 AAAPAAAARPAAAGPRPVAAA-----AAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDP 529

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*.
gi 2468437868  769 TAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKgTAPTTPKETASTTP 814
Cdd:PRK12323   530 ATADPDDAFETLAPAPAAAPAPRAAAATEPV-VAPRPPRASASGLP 574

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

434-529

1.51e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 1.51e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  434 PTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKepaptttksaptttkePAPTTTKSAPTTPKEPAPTA 513
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPA----------------APPKPAAAAAAAAAPAAPPA 101

                           90
                   ....*....|....*.
gi 2468437868  514 PKKPAPTTPKEPAPTT 529
Cdd:PRK12270   102 AAAAAAPAAAAVEDEV 117

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

510-642

1.56e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 52.79 E-value: 1.56e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  510 APTAPKKPAPTTPKEPAPTTPkEPAPTTTKSAPTTPKEPSPTTTKEPApttpkepAPTTPKKPAPTTPKETAPTTPKEPA 589
Cdd:PRK14951   369 AAEAAAPAEKKTPARPEAAAP-AAAPVAQAAAAPAPAAAPAAAASAPA-------APPAAAPPAPVAAPAAAAPAAAPAA 440

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  590 PTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPE 642
Cdd:PRK14951   441 APAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493

PRK14948

DNA polymerase III subunit gamma/tau;

285-463

1.68e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 52.66 E-value: 1.68e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  285 LAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPapTTPKEPAPTTPKEPAPTTTKSAPT 364
Cdd:PRK14948   360 LPSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASP--PIPVPAEPTEPSPTPPANAANAPP 437

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  365 TP------------MEPaPTT-------------------------------PKEPAPTTT----------------KSA 385
Cdd:PRK14948   438 SLnleelwqqilakLEL-PSTrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQAfakvlgrsiklnlesqSGS 516

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  386 PTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKP 463
Cdd:PRK14948   517 ASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594

PRK10856

cytoskeleton protein RodZ;

353-449

1.76e-06

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 51.57 E-value: 1.76e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  353 EPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTpkePAPTTTKEP 432
Cdd:PRK10856   160 QSVPLDTSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAA---PATPDGAAP 236

                           90
                   ....*....|....*..
gi 2468437868  433 APTTPKepAPTTTKSAP 449
Cdd:PRK10856   237 LPTDQA--GVSTPAADP 251

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

471-557

1.76e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 1.76e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  471 PAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSP 550
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117


                   ....*..
gi 2468437868  551 TTTKEPA 557
Cdd:PRK12270   118 TPLRGAA 124

PHA03379

EBNA-3A; Provisional

335-561

1.88e-06

EBNA-3A; Provisional

Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 52.75 E-value: 1.88e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  335 PKEPAPTTPKEPAPTtPKEPAP----TTTKSAPTTPMEPAPTTPKEPAPTTTKSApttpMEPAPTTPKKPAPTTPKEPAp 410
Cdd:PHA03379   408 ASEPTYGTPRPPVEK-PRPEVPqsleTATSHGSAQVPEPPPVHDLEPGPLHDQHS----MAPCPVAQLPPGPLQDLEPG- 481

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  411 ttpkEPAPTTPKEPAPTTTKEPAPT----TPKEPAPTTTKSAPTTPKEPAPtTPKKPVPT-TPKEPAPTTPKEPAPTTTK 485
Cdd:PHA03379   482 ----DQLPGVVQDGRPACAPVPAPAgpivRPWEASLSQVPGVAFAPVMPQP-MPVEPVPVpTVALERPVCPAPPLIAMQG 556

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  486 SAPTTTKEPAPTTTKSAPTTPKEPAPTAP----KKPAPTTPKEPAPTTPKEPAPT-TTKSAPTTPKEPSPTTTKEPAPTT 560
Cdd:PHA03379   557 PGETSGIVRVRERWRPAPWTPNPPRSPSQmsvrDRLARLRAEAQPYQASVEVQPPqLTQVSPQQPMEYPLEPEQQMFPGS 636


                   .
gi 2468437868  561 P 561
Cdd:PHA03379   637 P 637

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

390-542

2.11e-06

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 51.69 E-value: 2.11e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  390 MEPAPTTPKKPAPTTPKEPapttpKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTttksapTTPKEPAPTTPKKPVPTTPK 469
Cdd:NF040712   188 IDPDFGRPLRPLATVPRLA-----REPADARPEEVEPAPAAEGAPATDSDPAEA------GTPDDLASARRRRAGVEQPE 256

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  470 EPAPTTPKEPAPTTTKSAPTTTKEPAPTTTksAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAP 542
Cdd:NF040712   257 DEPVGPGAAPAAEPDEATRDAGEPPAPGAA--ETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRR 327

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

456-563

2.16e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.12 E-value: 2.16e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  456 APTTPKKPVPTTPKEPAPTTPKepaptttksaptttkePAPTTTKSAPttPKEPAPTAPKKPAPTTPKEPAPTTPKEPAP 535
Cdd:PRK14950   361 VPVPAPQPAKPTAAAPSPVRPT----------------PAPSTRPKAA--AAANIPPKEPVRETATPPPVPPRPVAPPVP 422

                           90       100       110
                   ....*....|....*....|....*....|
gi 2468437868  536 TTTKSAPTTPKE--PSPTTTKEPAPTTPKE 563
Cdd:PRK14950   423 HTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

341-431

2.21e-06

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 51.77 E-value: 2.21e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  341 TTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTT--PKKPAPTTPKEPAP-TTPKEPA 417
Cdd:COG3266    269 TTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAakPVVTETAAPAAPAPeAAAAAAA 348

                           90
                   ....*....|....
gi 2468437868  418 PTTPKEPAPTTTKE 431
Cdd:COG3266    349 PAAPAVAKKLAADE 362

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

300-393

2.29e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.12 E-value: 2.29e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  300 ALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAP 379
Cdd:PRK14950   358 ALLVPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAIP 437

                           90
                   ....*....|....
gi 2468437868  380 TTTKSAPTTPMEPA 393
Cdd:PRK14950   438 VDEKPKYTPPAPPK 451

PRK07994

DNA polymerase III subunits gamma and tau; Validated

462-650

2.32e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 52.18 E-value: 2.32e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  462 KPVPTTPKEPAPTTPkepaptttksaptttKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSA 541
Cdd:PRK07994   360 HPAAPLPEPEVPPQS---------------AAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLA 424

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  542 PTTPKEPSPTTTKEPapttPKEPAPTTPKKPAPTTPKETAPTTPkepapTTTKKPAPTTPKEPAPTTPkeTAPTTPEKLT 621
Cdd:PRK07994   425 ARQQLQRAQGATKAK----KSEPAAASRARPVNSALERLASVRP-----APSALEKAPAKKEAYRWKA--TNPVEVKKEP 493

                          170       180
                   ....*....|....*....|....*....
gi 2468437868  622 PTTPEKLAPTTPEEPaptTPEEPAPTTPE 650
Cdd:PRK07994   494 VATPKALKKALEHEK---TPELAAKLAAE 519

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

479-565

2.35e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.59 E-value: 2.35e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  479 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAP 558
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117


                   ....*..
gi 2468437868  559 TTPKEPA 565
Cdd:PRK12270   118 TPLRGAA 124

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

525-618

2.92e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.20 E-value: 2.92e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  525 PAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKepaptttkkpapttpkEP 604
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPP----------------AA 102

                           90
                   ....*....|....
gi 2468437868  605 APTTPKETAPTTPE 618
Cdd:PRK12270   103 AAAAAPAAAAVEDE 116

PRK14948

DNA polymerase III subunit gamma/tau;

343-509

3.02e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 51.89 E-value: 3.02e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  343 PKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPttpmEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPK 422
Cdd:PRK14948   363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSP----PPAKASPPIPVPAEPTEPSPTPPANAANAPPS 438

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  423 E-------------PAPTT------------------------------------------------------TKEPAPT 435
Cdd:PRK14948   439 LnleelwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSAS 518

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2468437868  436 TPKEPAPTTTKSAPT-TPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 509
Cdd:PRK14948   519 NTAKTPPPPQKSPPPpAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSS 593

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

354-444

3.10e-06

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 51.39 E-value: 3.10e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  354 PAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKkPAPTTPKEPAPTT--PKEPAPTTPKEPAPTTTK- 430
Cdd:COG3266    267 PATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAA-AAPAEAAAPQPTAakPVVTETAAPAAPAPEAAAa 345

                           90
                   ....*....|....
gi 2468437868  431 EPAPTTPKEPAPTT 444
Cdd:COG3266    346 AAAPAAPAVAKKLA 359

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

493-618

3.12e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.64 E-value: 3.12e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  493 EPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTttkSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP 572
Cdd:PRK14951   371 EAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAP---AAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVAL 447

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*.
gi 2468437868  573 APTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPE 618
Cdd:PRK14951   448 APAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

518-617

4.03e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 51.35 E-value: 4.03e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  518 APTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAP----TTPKEPAPTTPKKPAPTTPKETAPTTPKEPApttt 593
Cdd:PRK14950   361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEpvreTATPPPVPPRPVAPPVPHTPESAPKLTRAAI---- 436

                           90       100
                   ....*....|....*....|....
gi 2468437868  594 kkpapttpkePAPTTPKETAPTTP 617
Cdd:PRK14950   437 ----------PVDEKPKYTPPAPP 450

Not5

COG5665

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

259-537

4.08e-06

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 51.59 E-value: 4.08e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  259 EKTTSAKETQSIEKTSAKDLAPTSKVLAKP-TPKPETTTKGPALTTPKEPTPTTPKEPASTTPkEPTATTIKSAPTTPKE 337
Cdd:COG5665    264 PTSPSGGTTPPSTNQLTTSNTPTSTAKAQPqPPTKKQPAKEPPSDTASGNPSAPSVLINSDSP-TSEDPATASVPTTEET 342

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  338 PAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPApttpkKPAPTTPKEPAPTTPKEPA 417
Cdd:COG5665    343 TAFTTPSSVPSTPAEKDTPATDLATPVSPTPPETSVDKKVSPDSATSSTKSEKEGG-----TASSPMPPNIAIGAKDDVD 417

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  418 PTTPKEPAPTTTKEPAPTTPKEPAPtttKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPT 497
Cdd:COG5665    418 ATDPSQEAKEYTKNAPMTPEADSAP---ESSVRTEASPSAGSDLEPENTTLRDPAPNAIPPPEDPSTIGRLSSGDKLANE 494

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|
gi 2468437868  498 TTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTT 537
Cdd:COG5665    495 TGPPVIRRDSTPSSTADQSIVGVLAFGLDQRTQAEISVEA 534

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

468-750

5.02e-06

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 51.23 E-value: 5.02e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  468 PKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTpKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKE 547
Cdd:PTZ00449   521 PKAPGDKEGEEGEHEDSKESDEPKEGGKPGETKEGEVG-KKPGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPEEPKKPKR 599

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  548 PSpTTTKEPAPTTPKEPA----PTTPKKP-APTTPKetAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKET-APTTPEKLT 621
Cdd:PTZ00449   600 PR-SAQRPTRPKSPKLPElldiPKSPKRPeSPKSPK--RPPPPQRPSSPERPEGPKIIKSPKPPKSPKPPfDPKFKEKFY 676

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  622 PTTPEKlAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPkepapttPKEPAPTTPKETA 701
Cdd:PTZ00449   677 DDYLDA-AAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKLPRDEEFPFEP-------IGDPDAEQPDDIE 748

                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2468437868  702 PTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA--PTTP 750
Cdd:PTZ00449   749 FFTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAMkrPDSP 799

PHA03378

EBNA-3B; Provisional

319-711

5.11e-06

EBNA-3B; Provisional

Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 51.22 E-value: 5.11e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  319 TPKEPTATTIKSAPTTPKEPAPTTP-KEPAPTTPKEPAPTTTKSAPTTPMEPAPTTP---------KEPAPTTTKSAPTT 388
Cdd:PHA03378   444 TPHSQAPTVVLHRPPTQPLEGPTGPlSVQAPLEPWQPLPHPQVTPVILHQPPAQGVQahgsmldllEKDDEDMEQRVMAT 523

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  389 PMEPAPTTPK--KPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPT 466
Cdd:PHA03378   524 LLPPSPPQPRagRRAPCVYTEDLDIESDEPASTEPVHDQLLPAPGLGPLQIQPLTSPTTSQLASSAPSYAQTPWPVPHPS 603

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  467 TPKEPapttpkepaptttksaptttkepaPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTtksaPTTPK 546
Cdd:PHA03378   604 QTPEP------------------------PTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITFNVLVFPT----PHQPP 655

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  547 EPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPE 626
Cdd:PHA03378   656 QVEITPYKPTWTQIGHIPYQPSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRAR 735

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  627 KLAPTtpeePAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKE-----PAPTTPKEPAPTTPKETA 701
Cdd:PHA03378   736 PPAAA----PGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQrprgaPTPQPPPQAGPTSMQLMP 811

                          410
                   ....*....|
gi 2468437868  702 PTTPKGTAPT 711
Cdd:PHA03378   812 RAAPGQQGPT 821

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

380-449

5.40e-06

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 50.28 E-value: 5.40e-06

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  380 TTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAP 449
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGS 144

PRK07994

DNA polymerase III subunits gamma and tau; Validated

437-609

5.59e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 51.02 E-value: 5.59e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  437 PKEPAPTTtkSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKk 516
Cdd:PRK07994   361 PAAPLPEP--EVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK- 437

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  517 papttPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTkePAPTTPKEPAPTTPKKPAPTtpKETAPTTPKEPAPTTTKkp 596
Cdd:PRK07994   438 -----AKKSEPAAASRARPVNSALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKALEH-- 506

                          170
                   ....*....|...
gi 2468437868  597 apttPKEPAPTTP 609
Cdd:PRK07994   507 ----EKTPELAAK 515

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

433-539

5.65e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.04 E-value: 5.65e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  433 APTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPkepaptttksaptttKEPAPTTTKSAPTTPKEPAPT 512
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPA---------------APPKPAAAAAAAAAPAAPPAA 102

                           90       100
                   ....*....|....*....|....*..
gi 2468437868  513 APKKPAPTTPKEPAPTTPKEPAPTTTK 539
Cdd:PRK12270   103 AAAAAPAAAAVEDEVTPLRGAAAAVAK 129

PRK08691

DNA polymerase III subunits gamma and tau; Validated

504-686

6.39e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 50.86 E-value: 6.39e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  504 TTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSA---PTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKET 580
Cdd:PRK08691   375 TELQSPSAQTAEKETAAKKPQPRPEAETAQTPVQTASAaamPSEGKTAGPVSNQENNDVPPWEDAPDEAQTAAGTAQTSA 454

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  581 A-------PTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTP--EKLTPTTPEKLAPTTPEE----PAPTTPEEPAPT 647
Cdd:PRK08691   455 KsiqtaseAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPndEAVETETFAHEAPAEPFYgygfPDNDCPPEDGAE 534

                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 2468437868  648 TPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAP 686
Cdd:PRK08691   535 IPPPDWEHAAPADTAGGGADEEAEAGGIGGNNTPSAPPP 573

PRK07764

DNA polymerase III subunits gamma and tau; Validated

417-808

6.64e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 50.75 E-value: 6.64e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  417 APTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPkepaptttksaptttkePAP 496
Cdd:PRK07764   385 LGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSP-----------------AGN 447

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  497 TTTKSAPTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPT--TPKEPAP----TTPK 570
Cdd:PRK07764   448 APAGGAPSPPPAAAPSAQPAPAPAAA--PEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDaaTLRERWPeilaAVPK 525

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  571 KPAPTTPKETAPTTPKEPAPTT-----TKKPAPTTPKEP-----------------------APTTPKETAPTTPEKLTP 622
Cdd:PRK07764   526 RSRKTWAILLPEATVLGVRGDTlvlgfSTGGLARRFASPgnaevlvtalaeelggdwqveavVGPAPGAAGGEGPPAPAS 605

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  623 TTPeklAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPntpkEPAPTTPKEPAPTTPKETAP 702
Cdd:PRK07764   606 SGP---PEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVA----VPDASDGGDGWPAKAGGAAP 678

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  703 TTPKGTAPttlkEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTP 782
Cdd:PRK07764   679 AAPPPAPA----PAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGA 754

                          410       420
                   ....*....|....*....|....*.
gi 2468437868  783 KGTAPTTPKGTAPTTPKGTAPTTPKE 808
Cdd:PRK07764   755 PAQPPPPPAPAPAAAPAAAPPPSPPS 780

rne

PRK10811

ribonuclease E; Reviewed

262-472

6.76e-06

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 50.81 E-value: 6.76e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  262 TSAKETQSIEKTSAKDLAPTSKVLAKPTPKPETTTKgpalttpkeptPTTPKEPASTTPKEP--TATTIKSAPTTPKEPA 339
Cdd:PRK10811   848 VRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVV-----------SAPVVEAVAEVVEEPvvVAEPQPEEVVVVETTH 916

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  340 PTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTpkEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 419
Cdd:PRK10811   917 PEVIAAPVTEQPQVITESDVAVAQEVAEHAEPVV--EPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETV 994

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....
gi 2468437868  420 TPKEPAPTTTKEPAPTTPKEPAptttkSAPTTpKEPAPT-TPKKPVPTTPKEPA 472
Cdd:PRK10811   995 TAVEPEVAPAQVPEATVEHNHA-----TAPMT-RAPAPEyVPEAPRHSDWQRPT 1042

PHA03369

capsid maturational protease; Provisional

331-644

7.41e-06

capsid maturational protease; Provisional

Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 50.38 E-value: 7.41e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  331 APTTPKEPAPTTPKEPAPTTPKEPAPtttKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKP-APTTPKEPA 409
Cdd:PHA03369   355 APSRVLAAAAKVAVIAAPQTHTGPAD---RQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPqSPGTSYGPE 431

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  410 PTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPApTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPT 489
Cdd:PHA03369   432 PVGPVPPQPTNPYVMPISMANMVYPGHPQEHGHERKRKRGGELKEEL-IETLKLVKKLKEEQESLAKELEATAHKSEIKK 510

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  490 TTKEPAPTTTKSAPTTPKEPAPTAPkkpapttpkepapttpkEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTP 569
Cdd:PHA03369   511 IAESEFKNAGAKTAAANIEPNCSAD-----------------AAAPATKRARPETKTELEAVVRFPYQIRNMESPAFVHS 573

                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2468437868  570 KKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPttPKETAPTTPekLTPTTPEKL-APTTPEEPAPTTPEEP 644
Cdd:PHA03369   574 FTSTTLAAAAGQGSDTAEALAGAIETLLTQASAQPAG--LSLPAPAVP--VNASTPASTpPPLAPQEPPQPGTSAP 645

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

316-401

7.99e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 50.66 E-value: 7.99e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  316 ASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKsAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPT 395
Cdd:PRK12270    40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPP-KPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118


                   ....*.
gi 2468437868  396 TPKKPA 401
Cdd:PRK12270   119 PLRGAA 124

COG5373

Uncharacterized membrane protein [Function unknown];

344-412

9.02e-06

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 50.38 E-value: 9.02e-06

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  344 KEPAPTTPKEPAPtttkSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTT 412
Cdd:COG5373     40 AAEAASAPAEPEP----EAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAA 104

DUF4045

pfam13254

Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ...

340-574

9.47e-06

Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.

Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 49.78 E-value: 9.47e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  340 PTTPKEPAPTT-PKEPAPTttksaPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAP 418
Cdd:pfam13254  131 PTSPPSPSKTMdPKRWSPT-----KSSWLESALNRPESPKPKAQPSQPAQPAWMKELNKIRQSRASVDLGRPNSFKEVTP 205

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  419 TTPKEPAPTTTKEPAPTTPKEPAPTTTKsapttpKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTT 498
Cdd:pfam13254  206 VGLMRSPAPGGHSKSPSVSGISADSSPT------KEEPSEEADTLSTDKEQSPAPTSASEPPPKTKELPKDSEEPAAPSK 279

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  499 TKSAPTTPKEPAPTApkKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTT-------PKEPAPTTPKK 571
Cdd:pfam13254  280 SAEASTEKKEPDTES--SPETSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSPKPKPQSPPKdfranlrSREVPKDKSKK 357


                   ...
gi 2468437868  572 PAP 574
Cdd:pfam13254  358 DEP 360

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

316-397

1.01e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 50.27 E-value: 1.01e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  316 ASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPT 395
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117


                   ..
gi 2468437868  396 TP 397
Cdd:PRK12270   118 TP 119

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

604-714

1.05e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 50.27 E-value: 1.05e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  604 PAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPApttleeptpttpeepapttPKTAAPNTPKE 683
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPA-------------------AAAAAAAAPAA 98

                           90       100       110
                   ....*....|....*....|....*....|.
gi 2468437868  684 PAPTTPKEPAPTTPKETAPTTPKGTAPTTLK 714
Cdd:PRK12270    99 PPAAAAAAAPAAAAVEDEVTPLRGAAAAVAK 129

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

321-652

1.06e-05

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 49.77 E-value: 1.06e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  321 KEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKP 400
Cdd:NF033839   145 KDSSSSSSSGSSTKPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKLAVATYMSKILDDIQKHHLQK 224

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  401 APTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPa 480
Cdd:NF033839   225 EKHRQIVALIKELDELKKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSP- 303

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  481 ptttksaptttkEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTT 560
Cdd:NF033839   304 ------------QPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPEVKPQPEK 371

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  561 PKEPAPTTPKKPAPttpkETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKltPTTPEKLAPTTPEEPAPTT 640
Cdd:NF033839   372 PKPEVKPQPETPKP----EVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEK--PKPEVKPQPEKPKPEVKPQ 445

                          330
                   ....*....|..
gi 2468437868  641 PEEPAPTTPEEP 652
Cdd:NF033839   446 PEKPKPEVKPQP 457

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

280-418

1.10e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 50.10 E-value: 1.10e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  280 PTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPkEPTATtikSAPTTPKEPAPTTPKEPAPTTPKEPAPTtt 359
Cdd:PRK14951   366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAA-PAAAA---SAPAAPPAAAPPAPVAAPAAAAPAAAPA-- 439

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  360 ksAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPkKPAPTTPKEPAPTTPKEPAP 418
Cdd:PRK14951   440 --AAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASA-APAPAAAPAAARLTPTEEGD 495

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

417-503

1.12e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 50.27 E-value: 1.12e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  417 APTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAP 496
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117


                   ....*..
gi 2468437868  497 TTTKSAP 503
Cdd:PRK12270   118 TPLRGAA 124

Chi1

COG3469

Chitinase [Carbohydrate transport and metabolism];

259-469

1.14e-05

Chitinase [Carbohydrate transport and metabolism];

Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 49.75 E-value: 1.14e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  259 EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEP 338
Cdd:COG3469      4 VSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATAT 83

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  339 APTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAP 418
Cdd:COG3469     84 AAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGT 163

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2468437868  419 TTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPK 469
Cdd:COG3469    164 TTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLPK 214

motB

PRK12799

flagellar motor protein MotB; Reviewed

395-521

1.15e-05

flagellar motor protein MotB; Reviewed

Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 49.71 E-value: 1.15e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  395 TTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPT 474
Cdd:PRK12799   295 THGTVPVAAVTPSSAVTQSSAITPSSAAIPSPAVIPSSVTTQSATTTQASAVALSSAGVLPSDVTLPGTVALPAAEPVNM 374

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*..
gi 2468437868  475 TPKEPAPTTTKSAPTTtkepAPTTTKSAPTTPKEPAPTAPKKPAPTT 521
Cdd:PRK12799   375 QPQPMSTTETQQSSTG----NITSTANGPTTSLPAAPASNIPVSPTS 417

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

425-506

1.25e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 49.89 E-value: 1.25e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  425 APTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPT 504
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117


                   ..
gi 2468437868  505 TP 506
Cdd:PRK12270   118 TP 119

PHA03247

large tegument protein UL36; Provisional

325-530

1.40e-05

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.94 E-value: 1.40e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  325 ATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAP----------TTPMEPAPTTPKEPAPTTTKSAPTTPM---- 390
Cdd:PHA03247   256 APPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPdgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDgame 335

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  391 --EPAPTTPKKPAPTTPKEPAPT-TPKEPAP-------TTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTP 460
Cdd:PHA03247   336 vvSPLPRPRQHYPLGFPKRRRPTwTPPSSLEdlsagrhHPKRASLPTRKRRSARHAATPFARGPGGDDQTRPAAPVPASV 415

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  461 KKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTP 530
Cdd:PHA03247   416 PTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDATRKALDALRERRPPEP 485

PRK12727

flagellar biosynthesis protein FlhF;

394-585

1.50e-05

flagellar biosynthesis protein FlhF;

Pssm-ID: 237182 [Multi-domain] Cd Length: 559 Bit Score: 49.60 E-value: 1.50e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  394 PTTPKKPAPTtPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTpkKPVPTTPKEPAP 473
Cdd:PRK12727    63 PATAAAPAPA-PQAPTKPAAPVHAPLKLSANANMSQRQRVASAAEDMIAAMALRQPVSVPRQAPAA--APVRAASIPSPA 139

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  474 TTPKEPAPTTTKSAPTTTKEPAPTTT--KSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPT 551
Cdd:PRK12727   140 AQALAHAAAVRTAPRQEHALSAVPEQlfADFLTTAPVPRAPVQAPVVAAPAPVPAIAAALAAHAAYAQDDDEQLDDDGFD 219

                          170       180       190
                   ....*....|....*....|....*....|....*
gi 2468437868  552 TTKEPAPTTPKEPAPTTPKKP-APTTPKETAPTTP 585
Cdd:PRK12727   220 LDDALPQILPPAALPPIVVAPaAPAALAAVAAAAP 254

PRK08691

DNA polymerase III subunits gamma and tau; Validated

450-651

1.64e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 49.32 E-value: 1.64e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  450 TTPKEPAPTTPKKPvpTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKsaPTTPKEPAPTAPKKPAPTTPKEPAPTT 529
Cdd:PRK08691   375 TELQSPSAQTAEKE--TAAKKPQPRPEAETAQTPVQTASAAAMPSEGKTAG--PVSNQENNDVPPWEDAPDEAQTAAGTA 450

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  530 PKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTpkEPAPTTTKKPAPTTPKEPAPTTP 609
Cdd:PRK08691   451 QTSAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPNDEAVET--ETFAHEAPAEPFYGYGFPDNDCP 528

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|
gi 2468437868  610 KETAPTTPE-KLTPTTPEKLAPTTPEEPA-------PTTPEEPAPTTPEE 651
Cdd:PRK08691   529 PEDGAEIPPpDWEHAAPADTAGGGADEEAeaggiggNNTPSAPPPEFSTE 578

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

494-587

1.68e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 49.08 E-value: 1.68e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  494 PAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPA-PTTPKEPAPTTTKSAPTTPKEPSPTTTK--EPAPTTPKEPAPTTPK 570
Cdd:COG3266    265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSaVALPAAPAAAAAAAAPAEAAAPQPTAAKpvVTETAAPAAPAPEAAA 344

                           90
                   ....*....|....*...
gi 2468437868  571 K-PAPTTPKETAPTTPKE 587
Cdd:COG3266    345 AaAAPAAPAVAKKLAADE 362

2A1904

TIGR00927

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...

256-582

1.68e-05

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]

Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 49.61 E-value: 1.68e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  256 DGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTP-----KPETTTKGPALTTPKEPTPTTPKEPASTTPKePTATTIKS 330
Cdd:TIGR00927  100 DEATPSIAMENTPSPPRRTAKITPTTPKNNYSPTAagterVKEDTPATPSRALNHYISTSGRQRVKSYTPK-PRGEVKSS 178

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  331 APTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTpmEPAPTTPKKPAPTTPKEPAP 410
Cdd:TIGR00927  179 SPTQTREKVRKYTPSPLGRMVNSYAPSTFMTMPRSHGITPRTTVKDSEITATYKMLET--NPSKRTAGKTTPTPLKGMTD 256

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  411 TTP-------KEPAPTTPKEPAP----TTTKEPAPTTPKEPAPTTTKSAPTTPK----EPAPTTPKKPVPTTPkepapTT 475
Cdd:TIGR00927  257 NTPtfltrevETDLLTSPRSVVEkntlTTPRRVESNSSTNHWGLVGKNNLTTPQgtvlEHTPATSEGQVTISI-----MT 331

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  476 PKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKP--APTTPkepapTTPKEPAPTTT--------KSAPTTP 545
Cdd:TIGR00927  332 GSSPAETKASTAAWKIRNPLSRTSAPAVRIASATFRGLEKNPstAPSTP-----ATPRVRAVLTTqvhhcvvvKPAPAVP 406

                          330       340       350
                   ....*....|....*....|....*....|....*..
gi 2468437868  546 KEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAP 582
Cdd:TIGR00927  407 TTPSPSLTTALFPEAPSPSPSALPPGQPDLHPKAEYP 443

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

525-651

1.76e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.42 E-value: 1.76e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  525 PAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKePAPTTPKKPAPTTPKETAPttpkepaptttkkpapttpKEP 604
Cdd:PRK14950   345 SYGQLPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKE-------------------PVR 404

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 2468437868  605 APTTPKETAPTTPEKLTPTTPEKLAPTTPEE-PAPTTPEEPAPTTPEE 651
Cdd:PRK14950   405 ETATPPPVPPRPVAPPVPHTPESAPKLTRAAiPVDEKPKYTPPAPPKE 452

PRK08691

DNA polymerase III subunits gamma and tau; Validated

287-473

1.83e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 49.32 E-value: 1.83e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  287 KPTPKPETTTKGPALTTPKEPTPTTPKEPAsttpkEPtATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTP 366
Cdd:PRK08691   393 KPQPRPEAETAQTPVQTASAAAMPSEGKTA-----GP-VSNQENNDVPPWEDAPDEAQTAAGTAQTSAKSIQTASEAETP 466

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  367 MEPAPTTPKEPAPTTTKSAPTTPME-PAPTTP-KKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTT 444
Cdd:PRK08691   467 PENQVSKNKAADNETDAPLSEVPSEnPIQATPnDEAVETETFAHEAPAEPFYGYGFPDNDCPPEDGAEIPPPDWEHAAPA 546

                          170       180
                   ....*....|....*....|....*....
gi 2468437868  445 TKSAPTTPKEPAPTTPKKpvPTTPKEPAP 473
Cdd:PRK08691   547 DTAGGGADEEAEAGGIGG--NNTPSAPPP 573

DUF5585

pfam17823

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

285-652

1.90e-05

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 49.19 E-value: 1.90e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  285 LAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTAT------TIKSAPTTPKEPAPTTPKEPAPTTPKEPaPTT 358
Cdd:pfam17823   62 AATAAPAPVTLTKGTSAAHLNSTEVTAEHTPHGTDLSEPATRegaadgAASRALAAAASSSPSSAAQSLPAAIAAL-PSE 140

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  359 TKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPK 438
Cdd:pfam17823  141 AFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATG 220

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  439 EPAPTTTKSAPTTpKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEpaptapkkpa 518
Cdd:pfam17823  221 HPAAGTALAAVGN-SSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARRLSPAKHMPSD---------- 289

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  519 pTTPKEPAPTTPKEPAPTTTKsapTTPKEPSPTTTKEPAPT-TPKEPAPTTPKKPAPTTpkETAPTTPKEPAPTTTKKPA 597
Cdd:pfam17823  290 -TMARNPAAPMGAQAQGPIIQ---VSTDQPVHNTAGEPTPSpSNTTLEPNTPKSVASTN--LAVVTTTKAQAKEPSASPV 363

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2468437868  598 PTTPKEPAPTTpKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEP 652
Cdd:pfam17823  364 PVLHTSMIPEV-EATSPTTQPSPLLPTQGAAGPGILLAPEQVATEATAGTASAGP 417

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

316-724

1.93e-05

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 49.38 E-value: 1.93e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  316 ASTTPKEPTATTIKSAPTTPKEPAPTTPK------EPAPTTPKEPAPTTTKSAPTTPME-PAPTTPKEPAPTTTKSAPTT 388
Cdd:pfam03154   50 ASTSSNDSKAESMKKSSKKIKEEAPSPLKsakrqrEKGASDTEEPERATAKKSKTQEISrPNSPSEGEGESSDGRSVNDE 129

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  389 PMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKE------PAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKK 462
Cdd:pfam03154  130 GSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQqilqtqPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQ 209

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  463 PVPttPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPkEPAPTTPKEPAPTTTKSAP 542
Cdd:pfam03154  210 GSP--ATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSPHPPLQPMTQPPPPSQVSPQPLP-QPSLHGQMPPMPHSLQTGP 286

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  543 TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTtPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPK--ETAPTTPEKL 620
Cdd:pfam03154  287 SHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPG-QSQQRIHTPPSQSQLQSQQPPREQPLPPAPLSMPhiKPPPTTPIPQ 365

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  621 TPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAapntpkEPAPTTPKEPAPTTPKET 700
Cdd:pfam03154  366 LPNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQS------QQLPPPPAQPPVLTQSQS 439

                          410       420
                   ....*....|....*....|....
gi 2468437868  701 APTTPKGTAPTTLKEPAPTTPKKP 724
Cdd:pfam03154  440 LPPPAASHPPTSGLHQVPSQSPFP 463

PRK14948

DNA polymerase III subunit gamma/tau;

357-440

2.13e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 49.19 E-value: 2.13e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  357 TTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEP-APTTTKEPAPT 435
Cdd:PRK14948   512 SQSGSASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPiPEEPTPSPTKD 591


                   ....*
gi 2468437868  436 TPKEP 440
Cdd:PRK14948   592 SSPEE 596

PRK10905

cell division protein DamX; Validated

370-573

2.14e-05

cell division protein DamX; Validated

Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 48.40 E-value: 2.14e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  370 APTTPK-EPAPTTTKSAPTTPMEPAPTTPKKPAP-TTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKE--PAPTTT 445
Cdd:PRK10905    22 APSTSSsDQTASGEKSIDLAGNATDQANGVQPAPgTTSAEQTAGNTQQDVSLPPISSTPTQGQTPVATDGQQrvEVQGDL 101

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  446 KSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTT---TKSAPTTPKEP--APTAPKKPAPT 520
Cdd:PRK10905   102 NNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTAKTQTAERPATTrpaRKQAVIEPKKPqaTAKTEPKPVAQ 181

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  521 TPKEPAPTTPKEPAPTTtksAPTTPKEPSPTTTKEPAPTTpkEPAPTTPKKPA 573
Cdd:PRK10905   182 TPKRTEPAAPVASTKAP---AATSTPAPKETATTAPVQTA--SPAQTTATPAA 229

PRK10263

DNA translocase FtsK; Provisional

319-747

2.17e-05

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 49.31 E-value: 2.17e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  319 TPKEPTATTIKSAPTTPKEPAPTtPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPK 398
Cdd:PRK10263   343 TPPVASVDVPPAQPTVAWQPVPG-PQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYY 421

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  399 KPAPTTPKE-----PAPTTPKEPAPTTPKEPAPTTTKEPAPTTPK---EPAPTTTKSAPTTPKEPAPTTPKKPVPttpKE 470
Cdd:PRK10263   422 APAPEQPAQqpyyaPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQtyqQPAAQEPLYQQPQPVEQQPVVEPEPVV---EE 498

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  471 PAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAP--------TTTKSAP 542
Cdd:PRK10263   499 TKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPlasgvkkaTLATGAA 578

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  543 TTPKEP--SPTTTKEPAPTTPKEPAPTTPKKPAPTTP--------------KETAPTTPKEPAPTTTKKPAPTTPKEPAP 606
Cdd:PRK10263   579 ATVAAPvfSLANSGGPRPQVKEGIGPQLPRPKRIRVPtrrelasygiklpsQRAAEEKAREAQRNQYDSGDQYNDDEIDA 658

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  607 TTPKETA-------------------PTTPEKLTPTTPEKLAPT---------TPEEPAPTTP-----EEPAPT------ 647
Cdd:PRK10263   659 MQQDELArqfaqtqqqrygeqyqhdvPVNAEDADAAAEAELARQfaqtqqqrySGEQPAGANPfslddFEFSPMkalldd 738

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  648 TPEEPA-PTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAP 726
Cdd:PRK10263   739 GPHEPLfTPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQ 818

                          490       500
                   ....*....|....*....|.
gi 2468437868  727 KELAPTTTKEPTSTTSDKPAP 747
Cdd:PRK10263   819 QPQQPVAPQPQYQQPQQPVAP 839

PRK10263

DNA translocase FtsK; Provisional

494-710

2.32e-05

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 49.31 E-value: 2.32e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  494 PAPTTTKSAPTTPKEPAPTAPK---KPAPTtPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPK 570
Cdd:PRK10263   336 PVEPVTQTPPVASVDVPPAQPTvawQPVPG-PQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQ 414

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  571 KPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPttPEEPAPTTPE 650
Cdd:PRK10263   415 PAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQ--PVEQQPVVEP 492

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2468437868  651 EPAPTTLEEPTPT------TPEEPAPTTPKTAA-----PNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAP 710
Cdd:PRK10263   493 EPVVEETKPARPPlyyfeeVEEKRAREREQLAAwyqpiPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSP 563

PRK07994

DNA polymerase III subunits gamma and tau; Validated

286-418

2.51e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 48.71 E-value: 2.51e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  286 AKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTT 365
Cdd:PRK07994   381 AQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAASRARPVNSALERLA 460

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  366 PMEPAPTTPkEPAPTTTKSAPTTPMEPAPTtpKKPAPTTPKEPAPTTPKEPAP 418
Cdd:PRK07994   461 SVRPAPSAL-EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKALEHEKTP 510

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

571-651

2.54e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 49.12 E-value: 2.54e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  571 KPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPE 650
Cdd:PRK12270    37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116


                   .
gi 2468437868  651 E 651
Cdd:PRK12270   117 V 117

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

440-532

2.57e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 48.65 E-value: 2.57e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  440 PAPTTTKSAPTTPKePAPTTPkKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAP 519
Cdd:PRK14950   362 PVPAPQPAKPTAAA-PSPVRP-TPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAIPVD 439

                           90
                   ....*....|...
gi 2468437868  520 TTPKEPAPTTPKE 532
Cdd:PRK14950   440 EKPKYTPPAPPKE 452

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

375-480

2.88e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 48.31 E-value: 2.88e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  375 KEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTkEPAPTTPKEPAPTTTKsapttPKE 454
Cdd:COG3266    256 KAPSQASSASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAA-AAAPAEAAAPQPTAAK-----PVV 329

                           90       100
                   ....*....|....*....|....*..
gi 2468437868  455 PAPTTPKKPVP-TTPKEPAPTTPKEPA 480
Cdd:COG3266    330 TETAAPAAPAPeAAAAAAAPAAPAVAK 356

PRK10856

cytoskeleton protein RodZ;

493-585

3.00e-05

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 47.71 E-value: 3.00e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  493 EPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTtpkEPSPTTTKEPAPTTPKEPAPTTPKKP 572
Cdd:PRK10856   160 QSVPLDTSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVV---APSQANVDTAATPAPAAPATPDGAAP 236

                           90
                   ....*....|...
gi 2468437868  573 APTTPkeTAPTTP 585
Cdd:PRK10856   237 LPTDQ--AGVSTP 247

PRK07003

DNA polymerase III subunit gamma/tau;

293-470

3.00e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 48.69 E-value: 3.00e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  293 ETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPttPKEPAPT-------TPKEPAPTTTKSAPTT 365
Cdd:PRK07003   441 DAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDA--AFEPAPRaaapsaaTPAAVPDARAPAAASR 518

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  366 PMEPAPttPKEPAPTTTKSAPTTPMEPA--------------------------PTTPKKPAPTTPKEPAPTTPKEPAPT 419
Cdd:PRK07003   519 EDAPAA--AAPPAPEARPPTPAAAAPAAraggaaaaldvlrnagmrvssdrgarAAAAAKPAAAPAAAPKPAAPRVAVQV 596

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  420 -TPKEPAPTTTKEPAPTTPKEPAPTTTKSAPttPKEPAPttPKKPVPTTPKE 470
Cdd:PRK07003   597 pTPRARAATGDAPPNGAARAEQAAESRGAPP--PWEDIP--PDDYVPLSADE 644

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

337-463

3.09e-05

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 47.84 E-value: 3.09e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  337 EPAPTTPKEPAPTTPK-EPAPTTTKSAPTTP---MEPAPTTPKEPAPTTTKSAPT------TPMEPAPTTPKKPAPTTPK 406
Cdd:NF040712   189 DPDFGRPLRPLATVPRlAREPADARPEEVEPapaAEGAPATDSDPAEAGTPDDLAsarrrrAGVEQPEDEPVGPGAAPAA 268

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  407 EPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSA--PTTPKEPAPTTPKKP 463
Cdd:NF040712   269 EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAeePARPEPPPAPKPKRR 327

PRK11633

cell division protein DedD; Provisional

340-443

3.11e-05

cell division protein DedD; Provisional

Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 46.92 E-value: 3.11e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  340 PTTPKePAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 419
Cdd:PRK11633    42 PLVPK-PGDRDEPDMMPAATQALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPK 120

                           90       100
                   ....*....|....*....|....*.
gi 2468437868  420 TPK--EPAPTTTKEPAPTTPKEPAPT 443
Cdd:PRK11633   121 PQQkvEAPPAPKPEPKPVVEEKAAPT 146

PRK07994

DNA polymerase III subunits gamma and tau; Validated

279-426

3.24e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 48.32 E-value: 3.24e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  279 APTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATtikSAPTTPKEPAPTTP--KEPAPTTPKEPAP 356
Cdd:PRK07994   367 EPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVP---LPETTSQLLAARQQlqRAQGATKAKKSEP 443

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  357 TTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPmEPAPTTPKKPAPTtpKEPAPTTPKEPAPTTPKEPAP 426
Cdd:PRK07994   444 AAASRARPVNSALERLASVRPAPSALEKAPAKK-EAYRWKATNPVEV--KKEPVATPKALKKALEHEKTP 510

Chi1

COG3469

Chitinase [Carbohydrate transport and metabolism];

316-462

3.56e-05

Chitinase [Carbohydrate transport and metabolism];

Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 48.21 E-value: 3.56e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  316 ASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPT 395
Cdd:COG3469     69 TAATSSTTSTTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTT 148

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  396 TPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKK 462
Cdd:COG3469    149 TTTTVSGTETATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLPKH 215

PRK14971

DNA polymerase III subunit gamma/tau;

329-462

3.60e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 48.23 E-value: 3.60e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  329 KSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPkEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEP 408
Cdd:PRK14971   369 ASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAP-QSATQPAGTPPTVSVDPPAAVPVNPPSTAPQAV 447

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 2468437868  409 APTTPKEPAPTTpkePAPTTTKEPAPTTPKEPapttTKSAPTTPKEPAPTTPKK 462
Cdd:PRK14971   448 RPAQFKEEKKIP---VSKVSSLGPSTLRPIQE----KAEQATGNIKEAPTGTQK 494

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

325-452

3.91e-05

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 47.45 E-value: 3.91e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  325 ATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTT 404
Cdd:NF040712   206 AREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGEPPAPGA 285

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*....
gi 2468437868  405 PKEPAPTTPKEPAPTTPKEPAPTTTKEPA-PTTPKEPAPTTTKSAPTTP 452
Cdd:NF040712   286 AETPEAAEPPAPAPAAPAAPAAPEAEEPArPEPPPAPKPKRRRRRASVP 334

PLN03209

translocon at the inner envelope of chloroplast subunit 62; Provisional

265-533

3.99e-05

translocon at the inner envelope of chloroplast subunit 62; Provisional

Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 48.00 E-value: 3.99e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  265 KETQSIEKTSAKdLAPTSKVLAK-----PTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKS--------- 330
Cdd:PLN03209   301 KVVEVIAETTAP-LTPMEELLAKipsqrVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPlspytayed 379

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  331 -APTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSapTTPMEPAPTTPKKPAPTTPKEPA 409
Cdd:PLN03209   380 lKPPTSPIPTPPSSSPASSKSVDAVAKPAEPDVVPSPGSASNVPEVEPAQVEAKK--TRPLSPYARYEDLKPPTSPSPTA 457

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  410 PTtpkepapttpkePAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPkEPAPTTTKSAPT 489
Cdd:PLN03209   458 PT------------GVSPSVSSTSSVPAVPDTAPATAATDAAAPPPANMRPLSPYAVYDDLKPPTSP-SPAAPVGKVAPS 524

                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2468437868  490 TTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTP-------KEPAPTTPKEP 533
Cdd:PLN03209   525 STNEVVKVGNSAPPTALADEQHHAQPKPRPLSPytmyedlKPPTSPTPSPV 575

COG5373

Uncharacterized membrane protein [Function unknown];

336-404

4.15e-05

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 48.07 E-value: 4.15e-05

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  336 KEPAPTTPKEPAPttpkEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTT 404
Cdd:COG5373     40 AAEAASAPAEPEP----EAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAA 104

PRK14948

DNA polymerase III subunit gamma/tau;

447-619

4.79e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 48.04 E-value: 4.79e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  447 SAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPaptttksaptttKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPA 526
Cdd:PRK14948   366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTK------------QAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAA 433

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  527 PTTPK--------------EPAPT------------------------------------------------------TT 538
Cdd:PRK14948   434 NAPPSlnleelwqqilaklELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQ 513

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  539 KSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPE 618
Cdd:PRK14948   514 SGSASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSS 593


                   .
gi 2468437868  619 K 619
Cdd:PRK14948   594 P 594

Herpes_BLLF1

pfam05109

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...

317-722

4.80e-05

Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 47.99 E-value: 4.80e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  317 STTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMepapttpkePAPTTTKSAPTTPmEPAPtt 396
Cdd:pfam05109  427 STTTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTADVTSPT---------PAGTTSGASPVTP-SPSP-- 494

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  397 pkKPAPTTPKEPAPTTPKEpAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPT------TPKEPAPT------TPKKPV 464
Cdd:pfam05109  495 --RDNGTESKAPDMTSPTS-AVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTsavttpTPNATSPTpavttpTPNATI 571

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  465 PTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTT 544
Cdd:pfam05109  572 PTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTSSMSLRPSSI 651

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  545 PKEPSPTTTKEPAPTTP--KEPAPTTPKKPAPTTPketAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTP 622
Cdd:pfam05109  652 SETLSPSTSDNSTSHMPllTSAHPTGGENITQVTP---ASTSTHHVSTSSPAPRPGTTSQASGPGNSSTSTKPGEVNVTK 728

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  623 TTPEKLApTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKT---AAPNTPKEPAPTTPKEPAPTT--- 696
Cdd:pfam05109  729 GTPPKNA-TSPQAPSGQKTAVPTVTSTGGKANSTTGGKHTTGHGARTSTEPTTdygGDSTTPRTRYNATTYLPPSTSskl 807

                          410       420
                   ....*....|....*....|....*..
gi 2468437868  697 -PKETAPTTPKGTAPTTLKEPAPTTPK 722
Cdd:pfam05109  808 rPRWTFTSPPVTTAQATVPVPPTSQPR 834

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

406-651

4.80e-05

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 47.84 E-value: 4.80e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  406 KEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTttk 485
Cdd:NF033839   277 KGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPE--- 353

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  486 saptttkepapttTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPA 565
Cdd:NF033839   354 -------------VKPQPEKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEV 420

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  566 PTTPKKPAPTTpKETAPTTPKEpapTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPtTPEEPA 645
Cdd:NF033839   421 KPQPEKPKPEV-KPQPEKPKPE---VKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKP-QADDKK 495


                   ....*.
gi 2468437868  646 PTTPEE 651
Cdd:NF033839   496 PSTPNN 501

Not5

COG5665

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

470-720

5.19e-05

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 48.12 E-value: 5.19e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  470 EPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAptTPKEPAPTAPKKPAP--TTPKEPAPTTPKEPAPTTTKSAPTTPKE 547
Cdd:COG5665    259 QPKSQPTSPSGGTTPPSTNQLTTSNTPTSTAKA--QPQPPTKKQPAKEPPsdTASGNPSAPSVLINSDSPTSEDPATASV 336

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  548 PSP-----TTTKEPAPTTPKEPAP--TTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKL 620
Cdd:COG5665    337 PTTeettaFTTPSSVPSTPAEKDTpaTDLATPVSPTPPETSVDKKVSPDSATSSTKSEKEGGTASSPMPPNIAIGAKDDV 416

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  621 TPTTP-------EKLAPTTPE-EPAPTT------------PEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNT 680
Cdd:COG5665    417 DATDPsqeakeyTKNAPMTPEaDSAPESsvrteaspsagsDLEPENTTLRDPAPNAIPPPEDPSTIGRLSSGDKLANETG 496

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|
gi 2468437868  681 PkePAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTT 720
Cdd:COG5665    497 P--PVIRRDSTPSSTADQSIVGVLAFGLDQRTQAEISVEA 534

PRK13108

prolipoprotein diacylglyceryl transferase; Reviewed

393-561

5.25e-05

prolipoprotein diacylglyceryl transferase; Reviewed

Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 47.67 E-value: 5.25e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  393 APTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPA-PTTTKEPAPTTPKEPAP--TTTKSAPTTPKEPAPTTPKKPVPTTPK 469
Cdd:PRK13108   275 APKGREAPGALRGSEYVVDEALEREPAELAAAAvASAASAVGPVGPGEPNQpdDVAEAVKAEVAEVTDEVAAESVVQVAD 354

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  470 EPAPTTPKePAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPS 549
Cdd:PRK13108   355 RDGESTPA-VEETSEADIEREQPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELA 433

                          170
                   ....*....|..
gi 2468437868  550 PTTTkEPAPTTP 561
Cdd:PRK13108   434 VAGP-GDDPAEP 444

COG5373

Uncharacterized membrane protein [Function unknown];

361-428

5.35e-05

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 47.69 E-value: 5.35e-05

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  361 SAPTTPMEPAPttpkEPAPTTTKSAPTTPMEPAPTTPkKPAPTTPKEPAPTTPKEPAPTTPKEPAPTT 428
Cdd:COG5373     42 EAASAPAEPEP----EAAAAATAAAPEAAPAPVPEAP-AAPPAAAEAPAPAAAAPPAEAEPAAAPAAA 104

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

423-558

5.71e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 47.79 E-value: 5.71e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  423 EPAPTTTKEPAPTTPKEPAPtttksAPttpkEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSA 502
Cdd:PRK14951   372 AAAPAEKKTPARPEAAAPAA-----AP----VAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAP 442

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 2468437868  503 PTTPKEPAPTAPkkPAPTTPKEPAPTTPkEPAPTTTKSAPTTPKEPSPTTTKEPAP 558
Cdd:PRK14951   443 AAVALAPAPPAQ--AAPETVAIPVRVAP-EPAVASAAPAPAAAPAAARLTPTEEGD 495

PHA03247

large tegument protein UL36; Provisional

494-720

5.75e-05

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.01 E-value: 5.75e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  494 PAPTTTKSAPTTPKEPAPTAPKKPAPTtPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE---------- 563
Cdd:PHA03247   257 PPPVVGEGADRAPETARGATGPPPPPE-AAAPNGAAAPPDGVWGAALAGAPLALPAPPDPPPPAPAGDAEeeddedgame 335

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  564 ---PAPTTPKKPAPTTPKETAPT-TPKEPAPTTTKKPAPTTPKEPAPTT----PKETAPTTPEKLTPTTPEKLAPTTPEE 635
Cdd:PHA03247   336 vvsPLPRPRQHYPLGFPKRRRPTwTPPSSLEDLSAGRHHPKRASLPTRKrrsaRHAATPFARGPGGDDQTRPAAPVPASV 415

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  636 PAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKE 715
Cdd:PHA03247   416 PTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDATRKALDALRERRPPEPPGADLAELLG 495


                   ....*
gi 2468437868  716 PAPTT 720
Cdd:PHA03247   496 RHPDT 500

smart00120

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1188-1230

6.13e-05

Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 41.84 E-value: 6.13e-05

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 2468437868  1188 VDGLTTLRNGTLVAFRGHYFWMLSPFSP-PSPARRITEVW-GIPS 1230
Cdd:smart00120    1 IDAAFELRDGKTYFFKGDKYWRFDPKRVdPGYPKLISSFFpGLPC 45

PRK14948

DNA polymerase III subunit gamma/tau;

493-652

6.13e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 47.65 E-value: 6.13e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  493 EPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTT---- 568
Cdd:PRK14948   364 FISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLnlee 443

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  569 --------------------------------------------------------------------PKKPAPTTPKET 580
Cdd:PRK14948   444 lwqqilaklelpstrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAKT 523

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  581 APTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPeEPAPTTPEEPAPTTPEEP 652
Cdd:PRK14948   524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSP-PPPIPEEPTPSPTKDSSP 594

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

497-566

6.17e-05

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 47.20 E-value: 6.17e-05

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  497 TTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 566
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGS 144

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

533-612

6.38e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 47.58 E-value: 6.38e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  533 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKET 612
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118

FimV

COG3170

Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];

323-575

6.39e-05

Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];

Pssm-ID: 442403 [Multi-domain] Cd Length: 508 Bit Score: 47.48 E-value: 6.39e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  323 PTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAP 402
Cdd:COG3170    107 PAYAAAAAAPAAAPAPAPAAPAAAAAAADQPAAEAAPAASGEYYPVRPGDTLWSIAARPVRPSSGVSLDQMMVALYRANP 186

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  403 TTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPK-EPAPTTPKKPVPTTPKEPAPTTPKEPAP 481
Cdd:COG3170    187 DAFIDGNINRLKAGAVLRVPAAEEVAALSPAEARQEVQAQSADWAAYRARLaAAVEPAPAAAAPAAPPAAAAAAGPVPAA 266

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  482 TTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPApTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 561
Cdd:COG3170    267 AEDTLSPEVTAAAAAEEADALPEAAAELAERLAALEA-QLAELQRLLALKNPAPAAAVSAPAAAAAAATVEAAAPAAAAQ 345

                          250
                   ....*....|....
gi 2468437868  562 KEPAPTTPKKPAPT 575
Cdd:COG3170    346 PAAAAPAPALDNPL 359

COG5373

Uncharacterized membrane protein [Function unknown];

501-568

6.45e-05

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 47.69 E-value: 6.45e-05

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  501 SAPTTPKEPAPtapkkPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTT 568
Cdd:COG5373     42 EAASAPAEPEP-----EAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAA 104

PRK14971

DNA polymerase III subunit gamma/tau;

499-627

6.59e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 47.46 E-value: 6.59e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  499 TKSAPTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPK 578
Cdd:PRK14971   368 DASGGRGPKQHIKPVFTQPAAAPQ--PSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQ 445

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*....
gi 2468437868  579 ETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEK 627
Cdd:PRK14971   446 AVRPAQFKEEKKIPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTGTQK 494

PRK07003

DNA polymerase III subunit gamma/tau;

508-713

7.20e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.54 E-value: 7.20e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  508 EPAPTAPKKPAPTTPKEPAPTTPKePAPTTTKSAPTTPKEPSPTTTKepAPTTPKEPAPTTPKKPAPttpkETAPTTPKE 587
Cdd:PRK07003   359 EPAVTGGGAPGGGVPARVAGAVPA-PGARAAAAVGASAVPAVTAVTG--AAGAALAPKAAAAAAATR----AEAPPAAPA 431

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  588 PAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEePAPTTPEEPAPTTLEEPTPTTPEE 667
Cdd:PRK07003   432 PPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPP-DAAFEPAPRAAAPSAATPAAVPDA 510

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*.
gi 2468437868  668 PAPTTPKTaaPNTPKEPAPTTPKEPAPtTPKETAPTTPKGTAPTTL 713
Cdd:PRK07003   511 RAPAAASR--EDAPAAAAPPAPEARPP-TPAAAAPAARAGGAAAAL 553

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

316-390

7.46e-05

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 46.98 E-value: 7.46e-05

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2468437868  316 ASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPM 390
Cdd:PTZ00144   123 APPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVPMSRM 197

Herpes_BLLF1

pfam05109

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...

189-617

7.52e-05

Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 47.60 E-value: 7.52e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  189 KVTTPDTSTTQHNKVTTSPKITTAKP-INPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKET 267
Cdd:pfam05109  407 RTATNATTTTHKVIFSKAPESTTTSPtLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTADVTSPTPAGTTSGAS 486

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  268 QSIEKTSAKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPT---TPKEPAPTTPk 344
Cdd:pfam05109  487 PVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTpnaTSPTPAVTTP- 565

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  345 epaptTPKEPAPTTTKSAPTTPMepAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEP 424
Cdd:pfam05109  566 -----TPNATIPTLGKTSPTSAV--TTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITS 638

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  425 APTTTKEPAPTTPKEP-APTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAP 503
Cdd:pfam05109  639 SSTSSMSLRPSSISETlSPSTSDNSTSHMPLLTSAHPTGGENITQVTPASTSTHHVSTSSPAPRPGTTSQASGPGNSSTS 718

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  504 TTPKEPAPTAPKKPAPTTPKEpAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEpaPTTPKKPAPTTPKETAPT 583
Cdd:pfam05109  719 TKPGEVNVTKGTPPKNATSPQ-APSGQKTAVPTVTSTGGKANSTTGGKHTTGHGARTSTE--PTTDYGGDSTTPRTRYNA 795

                          410       420       430
                   ....*....|....*....|....*....|....
gi 2468437868  584 TPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTP 617
Cdd:pfam05109  796 TTYLPPSTSSKLRPRWTFTSPPVTTAQATVPVPP 829

PHA03377

EBNA-3C; Provisional

338-649

7.63e-05

EBNA-3C; Provisional

Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 47.35 E-value: 7.63e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  338 PAPTTPKEPAPTTPKEPAPTT--TKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPT--------TPKKPAPTTPKE 407
Cdd:PHA03377   412 PWRKPRTLPWPTPKTHPVKRTlvKTSGRSDEAEQAQSTPERPGPSDQPSVPVEPAHLTPVehttvilhQPPQSPPTVAIK 491

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  408 PAP------------------------TTPKEPAPTTPKEP--APTTTKEPAPTTPKEPAPTTTKSAPTTPkePAPTTPK 461
Cdd:PHA03377   492 PAPppsrrrrgacvvydddiievidveTTEEEESVTQPAKPhrKVQDGFQRSGRRQKRATPPKVSPSDRGP--PKASPPV 569

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  462 KPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKE-------PAPTTPKEPA 534
Cdd:PHA03377   570 MAPPSTGPRVMATPSTGPRDMAPPSTGPRQQAKCKDGPPASGPHEKQPPSSAPRDMAPSVVRMflrerllEQSTGPKPKS 649

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  535 PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAP 614
Cdd:PHA03377   650 FWEMRAGRDGSGIQQEPSSRRQPATQSTPPRPSWLPSVFVLPSVDAGRAQPSEESHLSSMSPTQPISHEEQPRYEDPDDP 729

                          330       340       350
                   ....*....|....*....|....*....|....*
gi 2468437868  615 TTPEkltpTTPEKLAPTTPEEPAPTTPEEPAPTTP 649
Cdd:PHA03377   730 LDLS----LHPDQAPPPSHQAPYSGHEEPQAQQAP 760

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

479-581

7.69e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 47.15 E-value: 7.69e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  479 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPkEPAPTTPKEPAPTTTKsapttPKEPSPTTTKEPAP 558
Cdd:COG3266    267 PATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAA-AAAPAEAAAPQPTAAK-----PVVTETAAPAAPAP 340

                           90       100
                   ....*....|....*....|....
gi 2468437868  559 -TTPKEPAPTTPKKPAPTTPKETA 581
Cdd:COG3266    341 eAAAAAAAPAAPAVAKKLAADEQW 364

PHA03307

transcriptional regulator ICP4; Provisional

424-807

7.74e-05

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 47.47 E-value: 7.74e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  424 PAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPttPKEPAPTTTKSAPTTTKEPAPTTTKSAP 503
Cdd:PHA03307    22 PRPPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGP--PPGPGTEAPANESRSTPTWSLSTLAPAS 99

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  504 TtPKEPAPTAPkkPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKePSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPT 583
Cdd:PHA03307   100 P-AREGSPTPP--GPSSPDPPPPTPPPASPPPSPAPDLSEMLR-PVGSPGPPPAASPPAAGASPAAVASDAASSRQAALP 175

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  584 TPKepaptttkkpapTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPT 663
Cdd:PHA03307   176 LSS------------PEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSE 243

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  664 TPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLK--EPAPTTPKKPAPKELAPTTTKEPTSTT 741
Cdd:PHA03307   244 SSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERspSPSPSSPGSGPAPSSPRASSSSSSSRE 323

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2468437868  742 SDKPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKGTAPTTPK 807
Cdd:PHA03307   324 SSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRR 389

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

367-506

7.87e-05

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 46.68 E-value: 7.87e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  367 MEPAPTTPKEPAPTTTKSAPT----TPMEPAPTTPKKPAPTTPKEPAPT-TPKEPAPTTPKEPAPTTTKEPAPTTPKEPA 441
Cdd:NF040712   188 IDPDFGRPLRPLATVPRLAREpadaRPEEVEPAPAAEGAPATDSDPAEAgTPDDLASARRRRAGVEQPEDEPVGPGAAPA 267

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  442 PTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSA--PTTP 506
Cdd:NF040712   268 AEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRrrASVP 334

PHA03247

large tegument protein UL36; Provisional

366-646

8.62e-05

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.63 E-value: 8.62e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  366 PMEPAPTTPKEPAPTTTK--SAPTTPMEPAPTTPKKPAPTTPKE-----PAPTTPKEPAPTTPKEPAPTTTKEPAPTTPK 438
Cdd:PHA03247   206 PSGPGPAAPADLTAAALHlyGASETYLQDEPFVERRVVISHPLRgdiaaPAPPPVVGEGADRAPETARGATGPPPPPEAA 285

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  439 EPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE-PAPTAPKKP 517
Cdd:PHA03247   286 APNGAAAPPDGVWGAALAGAPLALPAPPDPPPPAPAGDAEEEDDEDGAMEVVSPLPRPRQHYPLGFPKRRrPTWTPPSSL 365

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  518 APTTPKEPAPttPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPttpkepaptttkkpa 597
Cdd:PHA03247   366 EDLSAGRHHP--KRASLPTRKRRSARHAATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPASAP--------------- 428

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*....
gi 2468437868  598 pttpkePAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAP 646
Cdd:PHA03247   429 ------PPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDATR 471

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

377-478

8.90e-05

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 46.77 E-value: 8.90e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  377 PAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPtTPKEPAPTTTKSAPTtpkePA 456
Cdd:COG3266    265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQP-TAAKPVVTETAAPAA----PA 339

                           90       100
                   ....*....|....*....|...
gi 2468437868  457 PTTPKK-PVPTTPKEPAPTTPKE 478
Cdd:COG3266    340 PEAAAAaAAPAAPAVAKKLAADE 362

Chi1

COG3469

Chitinase [Carbohydrate transport and metabolism];

338-554

9.36e-05

Chitinase [Carbohydrate transport and metabolism];

Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 46.67 E-value: 9.36e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  338 PAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEP-----APTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTT 412
Cdd:COG3469      1 SSSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATtvvstTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTA 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  413 PKEPAPTTPkePAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTK 492
Cdd:COG3469     81 TATAAAAAA--TSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTET 158

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  493 EPAPTTTKSAPTTPkepaPTAPKKPAPTTPkePAPTTPKEPAPTTTKSAPTTPKEPSPTTTK 554
Cdd:COG3469    159 ATGGTTTTSTTTTT----TSASTTPSATTT--ATATTASGATTPSATTTATTTGPPTPGLPK 214

PRK04654

sec-independent translocase; Provisional

373-479

1.01e-04

sec-independent translocase; Provisional

Pssm-ID: 135173 [Multi-domain] Cd Length: 214 Bit Score: 45.19 E-value: 1.01e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  373 TPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTpkepAPTTPKEPAPTTTKEPAPTTPKEPAPTTT--KSAPT 450
Cdd:PRK04654   110 TPLELAHADLSASAQVDAAAGAEPGAGQAHTPVPAPAPVI----AQAQPIAPAPHQTLVPAPHDTIVPAPHAAhlPSAPA 185

                           90       100
                   ....*....|....*....|....*....
gi 2468437868  451 TPKEPAPTTPKKPVPTTPKEPAPTTPKEP 479
Cdd:PRK04654   186 TPVSVAPVDAGTSASPTPSEPTKIQEKQP 214

PRK07764

DNA polymerase III subunits gamma and tau; Validated

494-839

1.03e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.90 E-value: 1.03e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  494 PAPTTTKSAPTTPKEPAPTAPkkPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSptttKEPAPTTPKEPAPTTPKKPA 573
Cdd:PRK07764   396 AAAPSAAAAAPAAAPAPAAAA--PAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAP----AGGAPSPPPAAAPSAQPAPA 469

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  574 PTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPT-----------TPEKLTPTTPEKLAPTTPEEP------ 636
Cdd:PRK07764   470 PAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATlrerwpeilaaVPKRSRKTWAILLPEATVLGVrgdtlv 549

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  637 ---------------------------------------APTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAA 677
Cdd:PRK07764   550 lgfstgglarrfaspgnaevlvtalaeelggdwqveavvGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAP 629

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  678 PNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAP-TTPKETAPT 756
Cdd:PRK07764   630 AGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAqPAPAPAATP 709

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  757 TPEETAPTTPEETAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKETASTTPKGTAPTtlKEPAPTTPKKPAPK 836
Cdd:PRK07764   710 PAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAA--PPPSPPSEEEEMAE 787


                   ...
gi 2468437868  837 ELA 839
Cdd:PRK07764   788 DDA 790

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

463-606

1.07e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 46.63 E-value: 1.07e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  463 PVPTTPKEPAPTTPKEPAptttksaptttkePAPTTTKSAPTTPKEPAPTApkKPAPTTPKEPAPTTPKEPAPTTtksAP 542
Cdd:PRK14951   373 AAPAEKKTPARPEAAAPA-------------AAPVAQAAAAPAPAAAPAAA--ASAPAAPPAAAPPAPVAAPAAA---AP 434

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2468437868  543 TTPKEPSPTttkePAPTTPKEPAPTTPKKPAPttPKETAPTTPKEPAPTTTKKPAPTTPKEPAP 606
Cdd:PRK14951   435 AAAPAAAPA----AVALAPAPPAQAAPETVAI--PVRVAPEPAVASAAPAPAAAPAAARLTPTE 492

COG5373

Uncharacterized membrane protein [Function unknown];

406-475

1.09e-04

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 46.92 E-value: 1.09e-04

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  406 KEPAPTTPKEPAPttpkePAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTT 475
Cdd:COG5373     40 AAEAASAPAEPEP-----EAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAA 104

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

440-542

1.15e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 46.38 E-value: 1.15e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  440 PAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPA-PTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPA 518
Cdd:COG3266    265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSaVALPAAPAAAAAAAAPAEAAAPQPTAAKPVVTETAAPAAPAPEAAA 344

                           90       100
                   ....*....|....*....|....*
gi 2468437868  519 PT-TPKEPAPTTPKEPAPTTTKSAP 542
Cdd:COG3266    345 AAaAPAAPAVAKKLAADEQWLASQP 369

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

367-470

1.19e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 46.38 E-value: 1.19e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  367 MEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTK--EPAPTTPKEPAPTT 444
Cdd:COG3266    263 SASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAAKpvVTETAAPAAPAPEA 342

                           90       100
                   ....*....|....*....|....*.
gi 2468437868  445 TKSApttpkePAPTTPKKPVPTTPKE 470
Cdd:COG3266    343 AAAA------AAPAAPAVAKKLAADE 362

PRK07994

DNA polymerase III subunits gamma and tau; Validated

564-730

1.32e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 46.40 E-value: 1.32e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  564 PAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLApttPEEPAPTTPEE 643
Cdd:PRK07994   366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQR---AQGATKAKKSE 442

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  644 PAPTTPEEPAPTTLEEPTPTTPEEpapttpkTAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKK 723
Cdd:PRK07994   443 PAAASRARPVNSALERLASVRPAP-------SALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAK 515


                   ....*..
gi 2468437868  724 PAPKELA 730
Cdd:PRK07994   516 LAAEAIE 522

COG5373

Uncharacterized membrane protein [Function unknown];

330-390

1.36e-04

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 46.53 E-value: 1.36e-04

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2468437868  330 SAPTTPKEPAPT---TPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPM 390
Cdd:COG5373     42 EAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAAS 105

PRK10263

DNA translocase FtsK; Provisional

279-557

1.40e-04

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 46.62 E-value: 1.40e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  279 APTSKVL-AKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTP-----KEPAPTTPKEPAPTTPK 352
Cdd:PRK10263   335 APVEPVTqTPPVASVDVPPAQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQyneplQQPVQPQQPYYAPAAEQ 414

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  353 EPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEP--APTTPKKPAPTTPkEPAPTTPKEPAPTtPKEPAPTTTK 430
Cdd:PRK10263   415 PAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQStfAPQSTYQTEQTYQ-QPAAQEPLYQQPQ-PVEQQPVVEP 492

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  431 EPAPTTPKEPAPTTTKSAPTTPK------------EPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKE-PAPT 497
Cdd:PRK10263   493 EPVVEETKPARPPLYYFEEVEEKrarereqlaawyQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGvKKAT 572

                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2468437868  498 TTKSAPTTPKEPA--PTAPKKPAPTTPKEPAPTTPKEP---APTTTKSAPTTPKEPSPTTTKEPA 557
Cdd:PRK10263   573 LATGAAATVAAPVfsLANSGGPRPQVKEGIGPQLPRPKrirVPTRRELASYGIKLPSQRAAEEKA 637

COG5373

Uncharacterized membrane protein [Function unknown];

513-584

1.41e-04

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 46.53 E-value: 1.41e-04

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  513 APKKPAPTTPKEPAPttpkEPAPTTTKSAPTTPKEPSPtTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTT 584
Cdd:COG5373     38 AEAAEAASAPAEPEP----EAAAAATAAAPEAAPAPVP-EAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAA 104

rne

PRK10811

ribonuclease E; Reviewed

582-748

1.47e-04

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 46.57 E-value: 1.47e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  582 PTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEklAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPT 661
Cdd:PRK10811   846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEA--VAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAP 923

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  662 PTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTT 741
Cdd:PRK10811   924 VTEQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAP 1003


                   ....*..
gi 2468437868  742 SDKPAPT 748
Cdd:PRK10811  1004 AQVPEAT 1010

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

539-635

1.48e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.42 E-value: 1.48e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  539 KSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPkepaptttkkpapttpKEPAPTTPKETAPTTPE 618
Cdd:PRK12270    37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAP----------------PKPAAAAAAAAAPAAPP 100

                           90
                   ....*....|....*..
gi 2468437868  619 KLTPTTPEKLAPTTPEE 635
Cdd:PRK12270   101 AAAAAAAPAAAAVEDEV 117

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

557-653

1.49e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 46.34 E-value: 1.49e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  557 APTTPKEPAPTTPKKPAPTTPKeTAPTTPkepaptttkkpAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEP 636
Cdd:PRK14950   361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTR-----------PKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESA 428

                           90
                   ....*....|....*...
gi 2468437868  637 APTTPEE-PAPTTPEEPA 653
Cdd:PRK14950   429 PKLTRAAiPVDEKPKYTP 446

PRK08691

DNA polymerase III subunits gamma and tau; Validated

411-581

1.62e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 46.24 E-value: 1.62e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  411 TTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSA---PTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSA 487
Cdd:PRK08691   375 TELQSPSAQTAEKETAAKKPQPRPEAETAQTPVQTASAaamPSEGKTAGPVSNQENNDVPPWEDAPDEAQTAAGTAQTSA 454

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  488 PTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKE-PAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 566
Cdd:PRK08691   455 KSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSEnPIQATPNDEAVETETFAHEAPAEPFYGYGFPDNDCPPEDGAE 534

                          170
                   ....*....|....*
gi 2468437868  567 TTPKKPAPTTPKETA 581
Cdd:PRK08691   535 IPPPDWEHAAPADTA 549

rne

PRK10811

ribonuclease E; Reviewed

435-645

1.68e-04

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 46.19 E-value: 1.68e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  435 TTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTtksaptttkEPAPTttksapTTPKEPAPTAP 514
Cdd:PRK10811   848 VRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVE---------EPVVV------AEPQPEEVVVV 912

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  515 KKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEpaptttk 594
Cdd:PRK10811   913 ETTHPEVIAAPVTEQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVA------- 985

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  595 kpaptTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTP--EEPAPTTPEEPA 645
Cdd:PRK10811   986 -----EVAAEVETVTAVEPEVAPAQVPEATVEHNHATAPmtRAPAPEYVPEAP 1033

PRK14971

DNA polymerase III subunit gamma/tau;

338-469

1.68e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 45.92 E-value: 1.68e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  338 PAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTtpmePAPTTPkkPAPTTPKEPAPTTPKEPA 417
Cdd:PRK14971   370 SGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQ----PAGTPP--TVSVDPPAAVPVNPPSTA 443

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  418 PTTPKEPAPTTTKEPAPTTPKEPAPTTTKsaPTTPKEPAPTTPKKPVPTTPK 469
Cdd:PRK14971   444 PQAVRPAQFKEEKKIPVSKVSSLGPSTLR--PIQEKAEQATGNIKEAPTGTQ 493

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

522-587

1.90e-04

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 45.44 E-value: 1.90e-04

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2468437868  522 PKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKE 587
Cdd:PTZ00144   124 PPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

295-386

1.91e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.04 E-value: 1.91e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  295 TTKGPALTTPKEPTPTTPKEPASTTPKEPTATTiKSAPTTPKEPAPTTPKEPAPTTPKEPAPtttksAPTTPMEPAPTTP 374
Cdd:PRK12270    34 ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKA-PAAPAPAPPAAAAPAAPPKPAAAAAAAA-----APAAPPAAAAAAA 107

                           90
                   ....*....|..
gi 2468437868  375 KEPAPTTTKSAP 386
Cdd:PRK12270   108 PAAAAVEDEVTP 119

PHA03307

transcriptional regulator ICP4; Provisional

216-565

2.01e-04

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 46.32 E-value: 2.01e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  216 NPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKPETT 295
Cdd:PHA03307    72 PPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAAS 151

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  296 TKGPALTTPKEPTPTTPKEPAS----------TTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKS---- 361
Cdd:PHA03307   152 PPAAGASPAAVASDAASSRQAAlplsspeetaRAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSaadd 231

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  362 APTTPMEPAPTTPKE-------------PAPTTTKSAPTTPMEPAPTTPKKPAPTTPK-------EPAPTTPKEPAPTTP 421
Cdd:PHA03307   232 AGASSSDSSSSESSGcgwgpenecplprPAPITLPTRIWEASGWNGPSSRPGPASSSSsprerspSPSPSSPGSGPAPSS 311

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  422 KEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKsaptttkePAPTTTKS 501
Cdd:PHA03307   312 PRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAP--------SSPAASAG 383

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2468437868  502 APTTPK-EPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPA 565
Cdd:PHA03307   384 RPTRRRaRAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYPLLTPSGEPWPGSPPPPP 448

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

369-440

2.01e-04

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 45.44 E-value: 2.01e-04

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  369 PAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEP 440
Cdd:PTZ00144   122 GAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

503-586

2.05e-04

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 42.73 E-value: 2.05e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  503 PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSA-PTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETA 581
Cdd:pfam02389   32 PCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPePCYPKVPEPCSPKVPEPCHPKAPEPCHPKVPEPCYPKAPE 111


                   ....*
gi 2468437868  582 PTTPK 586
Cdd:pfam02389  112 PCQPK 116

PRK13108

prolipoprotein diacylglyceryl transferase; Reviewed

374-549

2.08e-04

prolipoprotein diacylglyceryl transferase; Reviewed

Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 45.74 E-value: 2.08e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  374 PKEPAPTTTKSAPTTpmepapTTPKKPAPTTPKEPA-PTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKsapttP 452
Cdd:PRK13108   295 ALEREPAELAAAAVA------SAASAVGPVGPGEPNqPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPA-----V 363

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  453 KEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPtapkKPAPTTPKEPAPTTPkE 532
Cdd:PRK13108   364 EETSEADIEREQPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAP----IPDPAKPDELAVAGP-G 438

                          170
                   ....*....|....*..
gi 2468437868  533 PAPTTTKSAPTTPKEPS 549
Cdd:PRK13108   439 DDPAEPDGIRRQDDFSS 455

PRK14948

DNA polymerase III subunit gamma/tau;

452-627

2.09e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 45.72 E-value: 2.09e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  452 PKEPAPTTPKKPVPTTPKEPAPTTPKEPAptttksaptttkEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPK 531
Cdd:PRK14948   363 AFISEIANASAPANPTPAPNPSPPPAPIQ------------PSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPA 430

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  532 EPAPTTTKS--------------APTT----------------------------------------------------- 544
Cdd:PRK14948   431 NAANAPPSLnleelwqqilakleLPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnl 510

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  545 -PKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPT 623
Cdd:PRK14948   511 eSQSGSASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTK 590


                   ....
gi 2468437868  624 TPEK 627
Cdd:PRK14948   591 DSSP 594

PspC_subgroup_1

NF033838

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...

367-438

2.13e-04

Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 45.77 E-value: 2.13e-04

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  367 MEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEP-APTTPKEPAPTTPKEPaPTTTKEPAPTTPK 438
Cdd:NF033838   414 EKPAEQPQPAPAPQPEKPAPKPEKPAEQPKAEKPADQQAEEDyARRSEEEYNRLTQQQP-PKTEKPAQPSTPK 485

PRK12757

cell division protein FtsN; Provisional

374-441

2.22e-04

cell division protein FtsN; Provisional

Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 44.65 E-value: 2.22e-04

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  374 PKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTP--KEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPA 441
Cdd:PRK12757   111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPprQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

356-423

2.27e-04

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 45.27 E-value: 2.27e-04

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  356 PTTTKSAPTTPmEPAPTTPKEPAPtTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKE 423
Cdd:TIGR00601   77 PKTGTGKVAPP-AATPTSAPTPTP-SPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142

PRK12727

flagellar biosynthesis protein FlhF;

281-478

2.28e-04

flagellar biosynthesis protein FlhF;

Pssm-ID: 237182 [Multi-domain] Cd Length: 559 Bit Score: 45.75 E-value: 2.28e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  281 TSKVLAKPTPKPETTTKGPAltTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAP---TTPKEPAPT 357
Cdd:PRK12727    62 TPATAAAPAPAPQAPTKPAA--PVHAPLKLSANANMSQRQRVASAAEDMIAAMALRQPVSVPRQAPAAapvRAASIPSPA 139

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  358 TTKSAPTTPMEPAPtTPKEPAPTTtksaPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKePAPTTTK------- 430
Cdd:PRK12727   140 AQALAHAAAVRTAP-RQEHALSAV----PEQLFADFLTTAPVPRAPVQAPVVAAPAPVPAIAAAL-AAHAAYAqdddeql 213

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*...
gi 2468437868  431 EPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKE 478
Cdd:PRK12727   214 DDDGFDLDDALPQILPPAALPPIVVAPAAPAALAAVAAAAPAPQNDEE 261

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

527-653

2.35e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 45.48 E-value: 2.35e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  527 PTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPK-KPAPTTPKETAPTTPKepaptttkkpaptTPKEPA 605
Cdd:PRK14951   366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAaASAPAAPPAAAPPAPV-------------AAPAAA 432

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 2468437868  606 PTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPA 653
Cdd:PRK14951   433 APAAAPAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPA 480

PRK10263

DNA translocase FtsK; Provisional

495-718

2.41e-04

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.85 E-value: 2.41e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  495 APTTTKSAPTTPKEPAPTAPKKPAPTTPKEpAPTTPKEPAPTTTKSAPTTPKEPSpTTTKEPAPTTPKEPAPTTPKKPAP 574
Cdd:PRK10263   325 AATTATQSWAAPVEPVTQTPPVASVDVPPA-QPTVAWQPVPGPQTGEPVIAPAPE-GYPQQSQYAQPAVQYNEPLQQPVQ 402

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  575 TTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTtPKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPAP 654
Cdd:PRK10263   403 PQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYA-PAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQP 481

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  655 TTLEEPTPTTPEEPAPTTPKTAAPNTPKE------------------PAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEP 716
Cdd:PRK10263   482 QPVEQQPVVEPEPVVEETKPARPPLYYFEeveekrarereqlaawyqPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAV 561


                   ..
gi 2468437868  717 AP 718
Cdd:PRK10263   562 SP 563

PLN03209

translocon at the inner envelope of chloroplast subunit 62; Provisional

506-726

2.48e-04

translocon at the inner envelope of chloroplast subunit 62; Provisional

Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 45.69 E-value: 2.48e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  506 PKEPAPTAPKKPAPTTPKEPAPTTPKE----PAPTTTKSAPTTP----KEPSPTTTKEPAPTTPKEPAPTT------PKK 571
Cdd:PLN03209   330 PKESDAADGPKPVPTKPVTPEAPSPPIeeepPQPKAVVPRPLSPytayEDLKPPTSPIPTPPSSSPASSKSvdavakPAE 409

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  572 PAPTTPKETAPTTP-KEPAPTTTKKPAPTTpkePAPTTPKETAPTTPeklTPTTPEKLAPTTPEEPA-PTTPEEPAPTTp 649
Cdd:PLN03209   410 PDVVPSPGSASNVPeVEPAQVEAKKTRPLS---PYARYEDLKPPTSP---SPTAPTGVSPSVSSTSSvPAVPDTAPATA- 482

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  650 eepAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKetAPTTPKGTAPTTLKEPAPTTPKKPAP 726
Cdd:PLN03209   483 ---ATDAAAPPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNE--VVKVGNSAPPTALADEQHHAQPKPRP 554

PRK14954

DNA polymerase III subunits gamma and tau; Provisional

386-473

2.59e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 45.32 E-value: 2.59e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  386 PTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPttpkepaptttkSAPTTPKEPAPTTPKKPVP 465
Cdd:PRK14954   376 NDGGVAPSPAGSPDVKKKAPEPDLPQPDRHPGPAKPEAPGARPAELPSP------------ASAPTPEQQPPVARSAPLP 443


                   ....*...
gi 2468437868  466 TTPKEPAP 473
Cdd:PRK14954   444 PSPQASAP 451

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

318-386

2.70e-04

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 44.89 E-value: 2.70e-04

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  318 TTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTT-PKEPAPTTTKSAP 386
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATaPESPSTSVPSSGS 144

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

256-370

2.73e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 45.57 E-value: 2.73e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  256 DGKEKTTS----AKETQSIEKTSAKDLAPTSKVLAKPTPKPETTTKGPAlttpkepTPTTPKEPASTTPKEPTATTIKSA 331
Cdd:PRK14950   338 DFQLRTTSygqlPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPTPAPS-------TRPKAAAAANIPPKEPVRETATPP 410

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 2468437868  332 PTTPK--EPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPA 370
Cdd:PRK14950   411 PVPPRpvAPPVPHTPESAPKLTRAAIPVDEKPKYTPPAPPK 451

COG5373

Uncharacterized membrane protein [Function unknown];

401-463

2.82e-04

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 45.38 E-value: 2.82e-04

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  401 APTTPKEPAPttpkePAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKP 463
Cdd:COG5373     43 AASAPAEPEP-----EAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAA 100

PRK10263

DNA translocase FtsK; Provisional

264-477

2.92e-04

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.46 E-value: 2.92e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  264 AKETQSIEKTSAKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTP 343
Cdd:PRK10263   376 APEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQST 455

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  344 KEPAPT-----TPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSApTTPMEPAPTTPKK-------------PAPTTP 405
Cdd:PRK10263   456 FAPQSTyqteqTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPA-RPPLYYFEEVEEKrarereqlaawyqPIPEPV 534

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2468437868  406 KEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPA--PTTPKKPVPTTPKEPAPTTPK 477
Cdd:PRK10263   535 KEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVfsLANSGGPRPQVKEGIGPQLPR 608

COG5373

Uncharacterized membrane protein [Function unknown];

384-444

3.12e-04

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 45.38 E-value: 3.12e-04

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2468437868  384 SAPTTPMEPAPTTPKKP---APTTPKEPAPTTPKEPaPTTPKEPAPTTTKEPAPTTPKEPAPTT 444
Cdd:COG5373     42 EAASAPAEPEPEAAAAAtaaAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAAAPAAA 104

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

674-728

3.20e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 45.27 E-value: 3.20e-04

                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2468437868  674 KTAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKE 728
Cdd:PRK12270    52 AAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAA 106

PHA03307

transcriptional regulator ICP4; Provisional

517-837

3.42e-04

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.55 E-value: 3.42e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  517 PAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKP 596
Cdd:PHA03307    22 PRPPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPA 101

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  597 APTTPKEPAPTTPKETAPTTPEKLTPTTP-----EKLAPTTPEEPAPTTPEEPAPTTPEEPApttleeptpttpeepapt 671
Cdd:PHA03307   102 REGSPTPPGPSSPDPPPPTPPPASPPPSPapdlsEMLRPVGSPGPPPAASPPAAGASPAAVA------------------ 163

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  672 tpktAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPApkelaptttKEPTSTTSDKPAPTTPK 751
Cdd:PHA03307   164 ----SDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPI---------SASASSPAPAPGRSAAD 230

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  752 ETAPTTPEETAPTTPEETAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKETASTTPKGTAPTTLKEPAPTTPK 831
Cdd:PHA03307   231 DAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPS 310


                   ....*.
gi 2468437868  832 KPAPKE 837
Cdd:PHA03307   311 SPRASS 316

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

513-580

3.75e-04

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 44.67 E-value: 3.75e-04

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  513 APKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKET 580
Cdd:PTZ00144   123 APPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRET 190

COG5373

Uncharacterized membrane protein [Function unknown];

508-576

3.76e-04

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 44.99 E-value: 3.76e-04

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  508 EPAPTAPKKPAPTTPKEPAPTTPKEPAPtttKSAPT-TPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTT 576
Cdd:COG5373     38 AEAAEAASAPAEPEPEAAAAATAAAPEA---APAPVpEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAA 104

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

411-473

3.95e-04

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 44.50 E-value: 3.95e-04

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  411 TTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAP 473
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGS 144

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

396-460

3.95e-04

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 44.50 E-value: 3.95e-04

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2468437868  396 TPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTT-PKEPAPTTP 460
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATaPESPSTSVP 140

PRK13108

prolipoprotein diacylglyceryl transferase; Reviewed

320-468

3.96e-04

prolipoprotein diacylglyceryl transferase; Reviewed

Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 44.58 E-value: 3.96e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  320 PKEPTATTIKSAPT--TPKEPAPTTPKEPAP--TTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTpmEPAPT 395
Cdd:PRK13108   295 ALEREPAELAAAAVasAASAVGPVGPGEPNQpdDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETS--EADIE 372

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  396 TPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPkKPVPTTP 468
Cdd:PRK13108   373 REQPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAVAGP-GDDPAEP 444

PRK10819

transport protein TonB; Provisional

330-464

4.11e-04

transport protein TonB; Provisional

Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 43.90 E-value: 4.11e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  330 SAPTTPKEPAPTTPKEPAPTTPKE-PAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEP 408
Cdd:PRK10819    34 SVHQVIELPAPAQPISVTMVAPADlEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIPKPEPKPKPKPKPKPKPVKKV 113

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 2468437868  409 APTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPV 464
Cdd:PRK10819   114 EEQPKREVKPVEPRPASPFENTAPARPTSSTATAAASKPVTSVSSGPRALSRNQPQ 169

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

321-423

4.37e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 44.46 E-value: 4.37e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  321 KEPTATTIKSAP-TTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPA-------PTTPKEPAPTTTKsapttPMEP 392
Cdd:COG3266    256 KAPSQASSASAPaTTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAaaaaaaaPAEAAAPQPTAAK-----PVVT 330

                           90       100       110
                   ....*....|....*....|....*....|..
gi 2468437868  393 APTTPKKPAP-TTPKEPAPTTPKEPAPTTPKE 423
Cdd:COG3266    331 ETAAPAAPAPeAAAAAAAPAAPAVAKKLAADE 362

motB

PRK12799

flagellar motor protein MotB; Reviewed

317-436

4.45e-04

flagellar motor protein MotB; Reviewed

Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 44.32 E-value: 4.45e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  317 STTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTT 396
Cdd:PRK12799   295 THGTVPVAAVTPSSAVTQSSAITPSSAAIPSPAVIPSSVTTQSATTTQASAVALSSAGVLPSDVTLPGTVALPAAEPVNM 374

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 2468437868  397 PKKPAPTTPKEPAPT---TPKEPAPTTPKEPAPTTTKEPAPTT 436
Cdd:PRK12799   375 QPQPMSTTETQQSSTgniTSTANGPTTSLPAAPASNIPVSPTS 417

PRK11633

cell division protein DedD; Provisional

496-583

4.57e-04

cell division protein DedD; Provisional

Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 43.45 E-value: 4.57e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  496 PTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 575
Cdd:PRK11633    57 PAATQALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPK 136

                           90
                   ....*....|
gi 2468437868  576 TPKE--TAPT 583
Cdd:PRK11633   137 PVVEekAAPT 146

PRK12757

cell division protein FtsN; Provisional

340-418

4.77e-04

cell division protein FtsN; Provisional

Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 43.49 E-value: 4.77e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  340 PTTPKE-PAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAP 418
Cdd:PRK12757    99 PTQLSEvPYNEQTPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAE 178

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

611-743

4.94e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 44.71 E-value: 4.94e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  611 ETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTtpeEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTtpk 690
Cdd:PRK14951   370 AEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAA---PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPA--- 443

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  691 ePAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSD 743
Cdd:PRK14951   444 -AVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGD 495

2A1904

TIGR00927

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...

274-585

4.99e-04

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]

Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 44.60 E-value: 4.99e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  274 SAKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKE 353
Cdd:TIGR00927   68 SNDEMMMVSSDPPKSSSEMEGEMLAPQATVGRDEATPSIAMENTPSPPRRTAKITPTTPKNNYSPTAAGTERVKEDTPAT 147

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  354 PAPTTTKSAPT---------TPMEPAPTTPKEPAPTTTKSAPTTPmEPAPTTPKKPAPTTPKEpAPTTPKEPAPTTPKEP 424
Cdd:TIGR00927  148 PSRALNHYISTsgrqrvksyTPKPRGEVKSSSPTQTREKVRKYTP-SPLGRMVNSYAPSTFMT-MPRSHGITPRTTVKDS 225

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  425 APTTTKEPAPTTPKEpaPTTTKSAPTTPKEPAPTTP-------------------KKPVPTTPK---------------E 470
Cdd:TIGR00927  226 EITATYKMLETNPSK--RTAGKTTPTPLKGMTDNTPtfltrevetdlltsprsvvEKNTLTTPRrvesnsstnhwglvgK 303

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  471 PAPTTPK------EPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTaPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTT 544
Cdd:TIGR00927  304 NNLTTPQgtvlehTPATSEGQVTISIMTGSSPAETKASTAAWKIRNPL-SRTSAPAVRIASATFRGLEKNPSTAPSTPAT 382

                          330       340       350       360
                   ....*....|....*....|....*....|....*....|....*...
gi 2468437868  545 PKEPSPTTTK-------EPAPTTPKEPAPTTPKKPAPTTPKETAPTTP 585
Cdd:TIGR00927  383 PRVRAVLTTQvhhcvvvKPAPAVPTTPSPSLTTALFPEAPSPSPSALP 430

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

548-643

5.01e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.88 E-value: 5.01e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  548 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPkepaptttkkpapttpKEPAPTTPKETAPTTPEKLTPTTPEK 627
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPP----------------AAAAPAAPPKPAAAAAAAAAPAAPPA 101

                           90
                   ....*....|....*.
gi 2468437868  628 LAPTTPEEPAPTTPEE 643
Cdd:PRK12270   102 AAAAAAPAAAAVEDEV 117

Pneumo_att_G

pfam05539

Pneumovirinae attachment membrane glycoprotein G;

438-620

5.42e-04

Pneumovirinae attachment membrane glycoprotein G;

Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 44.27 E-value: 5.42e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  438 KEPaPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTttkEPAPTTTKSAPTTPKEPAPTAPKKP 517
Cdd:pfam05539  166 KEP-KTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSST---EPVGTQGTTTSSNPEPQTEPPPSQR 241

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  518 APTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEP-APTTPKEPAPTTPK-KPAPTTPKETAPTTPKEPAPTTTKK 595
Cdd:pfam05539  242 GPSGSPQHPPSTTSQDQSTTGDGQEHTQRRKTPPATSNRrSPHSTATPPPTTKRqETGRPTPRPTATTQSGSSPPHSSPP 321

                          170       180
                   ....*....|....*....|....*
gi 2468437868  596 PAPTTPKEPAPTTPKETAPTTPEKL 620
Cdd:pfam05539  322 GVQANPTTQNLVDCKELDPPKPNSI 346

PRK14949

DNA polymerase III subunits gamma and tau; Provisional

319-480

5.69e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 44.72 E-value: 5.69e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  319 TPKEPTATtiKSAP-TTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTP--KEPAPTTTKSAPTTPmePAPT 395
Cdd:PRK14949   630 SPKEGDGK--KSSAdRKPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHqsVPEAALASGSAPAPP--PVPD 705

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  396 TPKKPAPTTPKE--PAPTTPKEPAPTTPKEPAPTTTKEPAPTTpkEPAPTTTKSAPTTPKEPAPTTpkkPVPTTPKEPAP 473
Cdd:PRK14949   706 PYDRPPWEEAPEvaSANDGPNNAAEGNLSESVEDASNSELQAV--EQQATHQPQVQAEAQSPASTT---ALTQTSSEVQD 780


                   ....*..
gi 2468437868  474 TTPKEPA 480
Cdd:PRK14949   781 TELNLVL 787

PRK14959

DNA polymerase III subunits gamma and tau; Provisional

330-450

5.90e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184923 [Multi-domain] Cd Length: 624 Bit Score: 44.29 E-value: 5.90e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  330 SAPTTPKEPAPTTPKEPAPTTPKEPAPTTTksAPTTPMEPAPTTPKEPAPTTTkSAPTTPMEPAPTTPkkPAPTTPKEPA 409
Cdd:PRK14959   379 SAPSGSAAEGPASGGAATIPTPGTQGPQGT--APAAGMTPSSAAPATPAPSAA-PSPRVPWDDAPPAP--PRSGIPPRPA 453

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|..
gi 2468437868  410 PTTPK-EPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPT 450
Cdd:PRK14959   454 PRMPEaSPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGPRT 495

PRK10819

transport protein TonB; Provisional

351-473

6.01e-04

transport protein TonB; Provisional

Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 43.13 E-value: 6.01e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  351 PKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTK 430
Cdd:PRK10819    42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQPKREV 121

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 2468437868  431 EPAPTTPKEPAPTTTKSAPTTPkePAPTTPKKPVPTTPKEPAP 473
Cdd:PRK10819   122 KPVEPRPASPFENTAPARPTSS--TATAAASKPVTSVSSGPRA 162

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

268-397

6.06e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 44.07 E-value: 6.06e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  268 QSIEKTSAKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPkEPTATTIKSAPTTPKEPAPTTPkEPA 347
Cdd:COG3266    236 AAEVLTARLVLLLLIIGSALKAPSQASSASAPATTSLGEQQEVSLPPAVAAQP-AAAAAAQPSAVALPAAPAAAAA-AAA 313

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|
gi 2468437868  348 PTTPKEPAPTTTKsaPTTPMEPAPTTPkEPAPTTTKSAPTTPMEPAPTTP 397
Cdd:COG3266    314 PAEAAAPQPTAAK--PVVTETAAPAAP-APEAAAAAAAPAAPAVAKKLAA 360

PRK04654

sec-independent translocase; Provisional

342-447

6.20e-04

sec-independent translocase; Provisional

Pssm-ID: 135173 [Multi-domain] Cd Length: 214 Bit Score: 42.88 E-value: 6.20e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  342 TPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTtksAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEP-APTT 420
Cdd:PRK04654   110 TPLELAHADLSASAQVDAAAGAEPGAGQAHTPVPAPAPVI---AQAQPIAPAPHQTLVPAPHDTIVPAPHAAHLPsAPAT 186

                           90       100
                   ....*....|....*....|....*..
gi 2468437868  421 PKEPAPTTTKEPAPTTPKEPAPTTTKS 447
Cdd:PRK04654   187 PVSVAPVDAGTSASPTPSEPTKIQEKQ 213

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

454-586

6.23e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 43.60 E-value: 6.23e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  454 EPAPTTPKKPVPTTPKEPapTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 533
Cdd:NF040712   189 DPDFGRPLRPLATVPRLA--REPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAP 266

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  534 APTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA------PTTPKETAPTTPK 586
Cdd:NF040712   267 AAEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAapeaeePARPEPPPAPKPK 325

PRK13108

prolipoprotein diacylglyceryl transferase; Reviewed

331-506

6.74e-04

prolipoprotein diacylglyceryl transferase; Reviewed

Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 43.81 E-value: 6.74e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  331 APTTPKEPAPTTPKEPAPTTPKEPAPTTtkSAPTTPMEPAPTTPkePAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAP 410
Cdd:PRK13108   275 APKGREAPGALRGSEYVVDEALEREPAE--LAAAAVASAASAVG--PVGPGEPNQPDDVAEAVKAEVAEVTDEVAAESVV 350

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  411 TTPKEPAPTTPkepAPTTTKEPAPTTPKEPAPTTTKSA-PTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPT 489
Cdd:PRK13108   351 QVADRDGESTP---AVEETSEADIEREQPGDLAGQAPAaHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPA 427

                          170
                   ....*....|....*..
gi 2468437868  490 TTKEPAPTTTKSAPTTP 506
Cdd:PRK13108   428 KPDELAVAGPGDDPAEP 444

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

636-730

7.33e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.11 E-value: 7.33e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  636 PAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTtlke 715
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV---- 113

                           90
                   ....*....|....*
gi 2468437868  716 PAPTTPKKPAPKELA 730
Cdd:PRK12270   114 EDEVTPLRGAAAAVA 128

PRK14971

DNA polymerase III subunit gamma/tau;

455-586

7.35e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 44.00 E-value: 7.35e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  455 PAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTtpkePAPTAPkkPAPTTPKEPAPTTPKEPA 534
Cdd:PRK14971   370 SGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQ----PAGTPP--TVSVDPPAAVPVNPPSTA 443

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  535 PTTTKSAPTTPKEPSPTTTKepAPTTPKEPAPTTPKKPAPTTPKETAPTTPK 586
Cdd:PRK14971   444 PQAVRPAQFKEEKKIPVSKV--SSLGPSTLRPIQEKAEQATGNIKEAPTGTQ 493

motB

PRK12799

flagellar motor protein MotB; Reviewed

329-447

7.40e-04

flagellar motor protein MotB; Reviewed

Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 43.94 E-value: 7.40e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  329 KSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEP 408
Cdd:PRK12799   299 VPVAAVTPSSAVTQSSAITPSSAAIPSPAVIPSSVTTQSATTTQASAVALSSAGVLPSDVTLPGTVALPAAEPVNMQPQP 378

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|..
gi 2468437868  409 APTTPKEPAPT---TPKEPAPTTTKEPAPTTPKEPAPTTTKS 447
Cdd:PRK12799   379 MSTTETQQSSTgniTSTANGPTTSLPAAPASNIPVSPTSRDA 420

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

784-861

7.52e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.11 E-value: 7.52e-04

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  784 GTAPTTPKGTAPTTPKGTAPTTPKETASTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKKPTSTTSDKPAPTIPKE 861
Cdd:PRK12270    37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVE 114

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

777-867

7.64e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.11 E-value: 7.64e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  777 TAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKETASTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKKPTSTTSDKPAP 856
Cdd:PRK12270    46 AAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTPLRGAAA 125

                           90
                   ....*....|...
gi 2468437868  857 TIPK--ETAPTIP 867
Cdd:PRK12270   126 AVAKnmDASLEVP 138

PRK10819

transport protein TonB; Provisional

394-534

8.09e-04

transport protein TonB; Provisional

Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 42.75 E-value: 8.09e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  394 PTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTtPKEPAP 473
Cdd:PRK10819    36 HQVIELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIPKPEPKPKPKPKPKPK-PVKKVE 114

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2468437868  474 TTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPkkpAPTTPKEPAPTTPKEPA 534
Cdd:PRK10819   115 EQPKREVKPVEPRPASPFENTAPARPTSSTATAAASKPVTS---VSSGPRALSRNQPQYPA 172

PRK14971

DNA polymerase III subunit gamma/tau;

359-467

8.14e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 44.00 E-value: 8.14e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  359 TKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPK 438
Cdd:PRK14971   363 TQKGDDASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPST 442

                           90       100
                   ....*....|....*....|....*....
gi 2468437868  439 EPAPTTTKSAPTTPKEPAPTTPKKPVPTT 467
Cdd:PRK14971   443 APQAVRPAQFKEEKKIPVSKVSSLGPSTL 471

PRK11901

hypothetical protein; Reviewed

346-463

8.26e-04

hypothetical protein; Reviewed

Pssm-ID: 237015 [Multi-domain] Cd Length: 327 Bit Score: 43.13 E-value: 8.26e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  346 PAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTP-------------------------------MEPAP 394
Cdd:PRK11901    93 SSPSAANNTSDGHDASGVKNTAPPQDISAPPISPTPTQAAPPQTpngqqrielpgnisdalsqqqgqvnaasqnaQGNTS 172

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  395 TTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPT-TPKEPAPTTTKSAPTTPKEPAPTTPKKP 463
Cdd:PRK11901   173 TLPTAPATVAPSKGAKVPATAETHPTPPQKPATKKPAVNHHkTATVAVPPATSGKPKSGAASARALSSAP 242

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

605-715

8.28e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 43.64 E-value: 8.28e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  605 APTTPKETAPTTPEKLTPTTPeKLAPTTPEEPAPTTPEEPAPTTPEEPapttleeptpttpeepapttPKTAAPNTPKEP 684
Cdd:PRK14950   361 VPVPAPQPAKPTAAAPSPVRP-TPAPSTRPKAAAAANIPPKEPVRETA--------------------TPPPVPPRPVAP 419

                           90       100       110
                   ....*....|....*....|....*....|...
gi 2468437868  685 APTTPKEPAPTTPKETAP--TTPKGTAPTTLKE 715
Cdd:PRK14950   420 PVPHTPESAPKLTRAAIPvdEKPKYTPPAPPKE 452

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

675-749

8.32e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.11 E-value: 8.32e-04

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2468437868  675 TAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTlkEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTT 749
Cdd:PRK12270    45 TAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAA--PPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117

COG5373

Uncharacterized membrane protein [Function unknown];

316-381

8.35e-04

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 43.84 E-value: 8.35e-04

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2468437868  316 ASTTPKEPTAttikSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTT 381
Cdd:COG5373     43 AASAPAEPEP----EAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAA 104

Chi1

COG3469

Chitinase [Carbohydrate transport and metabolism];

695-832

8.43e-04

Chitinase [Carbohydrate transport and metabolism];

Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 43.59 E-value: 8.43e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  695 TTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKETAPTTPEETAPTTPEETAPTTP 774
Cdd:COG3469     78 TTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTE 157

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  775 KGTAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKETASTTPKGTAPTTLKEPAPTTPKK 832
Cdd:COG3469    158 TATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLPKH 215

PRK04654

sec-independent translocase; Provisional

319-424

8.53e-04

sec-independent translocase; Provisional

Pssm-ID: 135173 [Multi-domain] Cd Length: 214 Bit Score: 42.49 E-value: 8.53e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  319 TPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTtksAPTTPMEPAPTTPKEPAP--TTTKSAPTTPMEPAPTT 396
Cdd:PRK04654   110 TPLELAHADLSASAQVDAAAGAEPGAGQAHTPVPAPAPVI---AQAQPIAPAPHQTLVPAPhdTIVPAPHAAHLPSAPAT 186

                           90       100
                   ....*....|....*....|....*...
gi 2468437868  397 PKKPAPTTPKEPAPTTPKEPAPTTPKEP 424
Cdd:PRK04654   187 PVSVAPVDAGTSASPTPSEPTKIQEKQP 214

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

341-411

8.58e-04

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 43.52 E-value: 8.58e-04

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2468437868  341 TTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPT 411
Cdd:PTZ00144   120 TGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRET 190

Chi1

COG3469

Chitinase [Carbohydrate transport and metabolism];

324-480

8.80e-04

Chitinase [Carbohydrate transport and metabolism];

Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 43.59 E-value: 8.80e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  324 TATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPT 403
Cdd:COG3469     53 ASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGS 132

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  404 TPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPA 480
Cdd:COG3469    133 TTTSGASATSSAGSTTTTTTVSGTETATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPT 209

SAV_2336_NTERM

NF041121

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...

392-474

8.87e-04

Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 43.45 E-value: 8.87e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  392 PAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPkePAPTTTKSAPTTPKEPAPTTPKKPVPttPKEP 471
Cdd:NF041121    19 AAPPSPEGPAPTAASQPATPPPPAAPPSPPGDPPEPPAPEPAPLPA--PYPGSLAPPPPPPPGPAGAAPGAALP--VRVP 94


                   ...
gi 2468437868  472 APT 474
Cdd:NF041121    95 APP 97

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

372-439

9.16e-04

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 43.35 E-value: 9.16e-04

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  372 TTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKE 439
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

392-468

9.35e-04

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 43.52 E-value: 9.35e-04

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  392 PAPTTPKKPAPTTPKEPAPTTPKEPAPttpkEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTT--PKKPVPTTP 468
Cdd:PTZ00144   122 GAPPAAAPAAAAAAKAEKTTPEKPKAA----APTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARAdpRETRVPMSR 196

PRK14954

DNA polymerase III subunits gamma and tau; Provisional

495-582

9.39e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 43.78 E-value: 9.39e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  495 APTTTKSAPTTPKepaptAPKKPAPTTPKEPAPTTPKEPAptttkSAPTTpkEPSPTTTkepapTTPKEPAPTTPKKPAP 574
Cdd:PRK14954   381 APSPAGSPDVKKK-----APEPDLPQPDRHPGPAKPEAPG-----ARPAE--LPSPASA-----PTPEQQPPVARSAPLP 443


                   ....*...
gi 2468437868  575 TTPKETAP 582
Cdd:PRK14954   444 PSPQASAP 451

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

288-371

9.52e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 43.73 E-value: 9.52e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  288 PTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATtiksAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPM 367
Cdd:PRK12270    40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAA----APAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVED 115


                   ....
gi 2468437868  368 EPAP 371
Cdd:PRK12270   116 EVTP 119

PRK10856

cytoskeleton protein RodZ;

409-476

9.73e-04

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 43.09 E-value: 9.73e-04

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  409 APTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTP 476
Cdd:PRK10856   169 TTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAP 236

PRK15313

intestinal colonization autotransporter adhesin MisL;

332-413

9.76e-04

intestinal colonization autotransporter adhesin MisL;

Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 43.63 E-value: 9.76e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  332 PTTPKEPAPTTPKEPAPTTPKepaptttksapttPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPT 411
Cdd:PRK15313   560 PDEPIIPDPVDPVIPDPVIPD-------------PVDPDPVDPVIPDPVIPDPVDPDPVDPEPVDPVIPDPTIPDIGQSD 626


                   ..
gi 2468437868  412 TP 413
Cdd:PRK15313   627 TP 628

PRK10856

cytoskeleton protein RodZ;

376-459

9.99e-04

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 43.09 E-value: 9.99e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  376 EPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPA--PTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPK 453
Cdd:PRK10856   160 QSVPLDTSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAvdPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPT 239


                   ....*.
gi 2468437868  454 EPAPTT 459
Cdd:PRK10856   240 DQAGVS 245

motB

PRK12799

flagellar motor protein MotB; Reviewed

262-404

1.00e-03

flagellar motor protein MotB; Reviewed

Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 43.17 E-value: 1.00e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  262 TSAKETQSIEKTSAKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPT 341
Cdd:PRK12799   279 NRALDIEKATGLKQIDTHGTVPVAAVTPSSAVTQSSAITPSSAAIPSPAVIPSSVTTQSATTTQASAVALSSAGVLPSDV 358

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  342 TPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTpkepAPTTTKSAPTTPMEPAPTTPKKPAPTT 404
Cdd:PRK12799   359 TLPGTVALPAAEPVNMQPQPMSTTETQQSSTG----NITSTANGPTTSLPAAPASNIPVSPTS 417

PRK15313

intestinal colonization autotransporter adhesin MisL;

358-437

1.03e-03

intestinal colonization autotransporter adhesin MisL;

Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 43.63 E-value: 1.03e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  358 TTKSAPTTPMEPAPTTPKEPAPTTTKsapttPMEPAPTTPKKPAPTTPkEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTP 437
Cdd:PRK15313   555 TSYIEPDEPIIPDPVDPVIPDPVIPD-----PVDPDPVDPVIPDPVIP-DPVDPDPVDPEPVDPVIPDPTIPDIGQSDTP 628

flhF

PRK06995

flagellar biosynthesis protein FlhF;

339-449

1.05e-03

flagellar biosynthesis protein FlhF;

Pssm-ID: 235904 [Multi-domain] Cd Length: 484 Bit Score: 43.42 E-value: 1.05e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  339 APTTPKEPAPTTPK-EPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPA 417
Cdd:PRK06995    52 APPAAAAPAAAQPPpAAAPAAVSRPAAPAAEPAPWLVEHAKRLTAQREQLVARAAAPAAPEAQAPAAPAERAAAENAARR 131

                           90       100       110
                   ....*....|....*....|....*....|..
gi 2468437868  418 PTTPKEPAPtttkEPAPTTPKEPAPTTTKSAP 449
Cdd:PRK06995   132 LARAAAAAP----RPRVPADAAAAVADAVKAR 159

Chi1

COG3469

Chitinase [Carbohydrate transport and metabolism];

323-516

1.05e-03

Chitinase [Carbohydrate transport and metabolism];

Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 43.59 E-value: 1.05e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  323 PTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAP 402
Cdd:COG3469     29 AASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATSTSATLVATSTASGANTG 108

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  403 TTPKEPAPTTPKEPAPTTPKePAPTTTKEPAPTTpkEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPkepapT 482
Cdd:COG3469    109 TSTVTTTSTGAGSVTSTTSS-TAGSTTTSGASAT--SSAGSTTTTTTVSGTETATGGTTTTSTTTTTTSASTTP-----S 180

                          170       180       190
                   ....*....|....*....|....*....|....
gi 2468437868  483 TTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKK 516
Cdd:COG3469    181 ATTTATATTASGATTPSATTTATTTGPPTPGLPK 214

Pneumo_att_G

pfam05539

Pneumovirinae attachment membrane glycoprotein G;

402-572

1.13e-03

Pneumovirinae attachment membrane glycoprotein G;

Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 43.11 E-value: 1.13e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  402 PTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTpkkpvptTPKEPAPTTPKEPAP 481
Cdd:pfam05539  168 PKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTT-------TSSNPEPQTEPPPSQ 240

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  482 TTTKSAPtttkEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 561
Cdd:pfam05539  241 RGPSGSP----QHPPSTTSQDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQETGRPTPRPTATTQSGSSPP 316

                          170
                   ....*....|.
gi 2468437868  562 KEPAPTTPKKP 572
Cdd:pfam05539  317 HSSPPGVQANP 327

COG5373

Uncharacterized membrane protein [Function unknown];

385-453

1.13e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 43.45 E-value: 1.13e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  385 APTTPMEPAPTTPKKPAPTTPkePAPTTPKEPAPTTPKEPAPTTTkEPAPTTPKEPAPTTTKSAPTTPK 453
Cdd:COG5373     40 AAEAASAPAEPEPEAAAAATA--AAPEAAPAPVPEAPAAPPAAAE-APAPAAAAPPAEAEPAAAPAAAS 105

PRK12323

DNA polymerase III subunit gamma/tau;

579-790

1.16e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 43.33 E-value: 1.16e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  579 ETAPTTPKEPA-PTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPeEPAPttpeEPAPTTPEEPAPTTL 657
Cdd:PRK12323   371 GAGPATAAAAPvAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARR-SPAP----EALAAARQASARGPG 445

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  658 EEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTtlkEPAPTTPKKPAPKELAPTTTKEP 737
Cdd:PRK12323   446 GAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPW---EELPPEFASPAPAQPDAAPAGWV 522

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  738 TSTTSDkPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTPKGTAPTTP 790
Cdd:PRK12323   523 AESIPD-PATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLP 574

COG5373

Uncharacterized membrane protein [Function unknown];

523-587

1.17e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 43.45 E-value: 1.17e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2468437868  523 KEPAPTTPKEPAPtttkSAPTTPKEPSPTTTKEPAPTTPKEPaPTTPKKPAPTTPKETAPTTPKE 587
Cdd:COG5373     40 AAEAASAPAEPEP----EAAAAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAA 99

Pneumo_att_G

pfam05539

Pneumovirinae attachment membrane glycoprotein G;

352-516

1.20e-03

Pneumovirinae attachment membrane glycoprotein G;

Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 43.11 E-value: 1.20e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  352 KEPaPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTtPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTke 431
Cdd:pfam05539  166 KEP-KTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPA-TQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQTEPPPSQR-- 241

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  432 pAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAP 511
Cdd:pfam05539  242 -GPSGSPQHPPSTTSQDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQETGRPTPRPTATTQSGSSPPHSSP 320


                   ....*
gi 2468437868  512 TAPKK 516
Cdd:pfam05539  321 PGVQA 325

PRK14963

DNA polymerase III subunits gamma and tau; Provisional

337-427

1.22e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184927 [Multi-domain] Cd Length: 504 Bit Score: 43.29 E-value: 1.22e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  337 EPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPT--TPKEPAPTTPK 414
Cdd:PRK14963   332 ELALLHALLALGGAPSEGVAAVAPPAPAPADLTQRLNRLEKEVRSLRSAPTAAATAAGAPLPDFDPRprGPPAPEPARSA 411

                           90
                   ....*....|...
gi 2468437868  415 EPAPTTPKEPAPT 427
Cdd:PRK14963   412 EAPPLVAPAAAPA 424

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

563-727

1.29e-03

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 42.83 E-value: 1.29e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  563 EPAPTTPKKPAPTTPKETapttpKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTpekltptTPEKLAPTTPEEPAPTTPE 642
Cdd:NF040712   189 DPDFGRPLRPLATVPRLA-----REPADARPEEVEPAPAAEGAPATDSDPAEAG-------TPDDLASARRRRAGVEQPE 256

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  643 EPAPTTPEEPAPTTLEEPTPTTPeepapttpkTAAPNTPKEPAPTTPKEPAPTTPkeTAPTTPKGTAPTTLKEPAPTTPK 722
Cdd:NF040712   257 DEPVGPGAAPAAEPDEATRDAGE---------PPAPGAAETPEAAEPPAPAPAAP--AAPAAPEAEEPARPEPPPAPKPK 325


                   ....*
gi 2468437868  723 KPAPK 727
Cdd:NF040712   326 RRRRR 330

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

407-555

1.32e-03

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 42.91 E-value: 1.32e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  407 EPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKS 486
Cdd:COG3266    213 ASALGEAVAAAAELAALALLAAGAAEVLTARLVLLLLIIGSALKAPSQASSASAPATTSLGEQQEVSLPPAVAAQPAAAA 292

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  487 APTTTKEPAPTTTKSAPTTPkepAPTAPKKPAPTT--PKEPAPTTPKEPAPTTTK--SAPTTPKEPSPTTTKE 555
Cdd:COG3266    293 AAQPSAVALPAAPAAAAAAA---APAEAAAPQPTAakPVVTETAAPAAPAPEAAAaaAAPAAPAVAKKLAADE 362

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

355-435

1.34e-03

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 42.75 E-value: 1.34e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  355 APTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTtpkEPAPTTPKEPAPTTTKEPAP 434
Cdd:PTZ00144   113 APLSEIDTGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPP---EPAPAAKPPPTPVARADPRE 189


                   .
gi 2468437868  435 T 435
Cdd:PTZ00144   190 T 190

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

332-437

1.37e-03

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 40.42 E-value: 1.37e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  332 PTTPKEPAPTTPKEPAPTTPKEPAPTTTKSapttpmePAPTTPKEPAPTTTKSapttpmePAPTTPKKPAPTTPKEPAPT 411
Cdd:pfam02389   32 PCNPKVPEPCCPKVPEPCCPKVPEPCCPKV-------PEPCCPKVPEPCYPKV-------PEPCSPKVPEPCHPKAPEPC 97

                           90       100
                   ....*....|....*....|....*.
gi 2468437868  412 TPKEPAPTTPKEPAPTTTKEPAPTTP 437
Cdd:pfam02389   98 HPKVPEPCYPKAPEPCQPKVPEPCPS 123

PRK14949

DNA polymerase III subunits gamma and tau; Provisional

398-549

1.37e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237863 [Multi-domain] Cd Length: 944 Bit Score: 43.18 E-value: 1.37e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  398 KKPA----PTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTtpkkPVPTTPKEPAP 473
Cdd:PRK14949   637 KKSSadrkPKTPPSRAPPASLSKPASSPDASQTSASFDLDPDFELATHQSVPEAALASGSAPAPP----PVPDPYDRPPW 712

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  474 TTPKEP--APTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPS 549
Cdd:PRK14949   713 EEAPEVasANDGPNNAAEGNLSESVEDASNSELQAVEQQATHQPQVQAEAQSPASTTALTQTSSEVQDTELNLVLLSS 790

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

291-383

1.44e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 43.34 E-value: 1.44e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  291 KPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPA 370
Cdd:PRK12270    37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116

                           90
                   ....*....|...
gi 2468437868  371 PTTPKEPAPTTTK 383
Cdd:PRK12270   117 VTPLRGAAAAVAK 129

PRK13108

prolipoprotein diacylglyceryl transferase; Reviewed

417-577

1.50e-03

prolipoprotein diacylglyceryl transferase; Reviewed

Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 42.66 E-value: 1.50e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  417 APTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPA-----PTTPKKPVPTT--PKEPAPTTPKEPAPTTTKSAPT 489
Cdd:PRK13108   275 APKGREAPGALRGSEYVVDEALEREPAELAAAAVASAASAvgpvgPGEPNQPDDVAeaVKAEVAEVTDEVAAESVVQVAD 354

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  490 TTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPA---PTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 566
Cdd:PRK13108   355 RDGESTPAVEETSEADIEREQPGDLAGQAPAAHQVDAeaaSAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAV 434

                          170
                   ....*....|.
gi 2468437868  567 TTPkKPAPTTP 577
Cdd:PRK13108   435 AGP-GDDPAEP 444

PRK14971

DNA polymerase III subunit gamma/tau;

392-523

1.53e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 42.84 E-value: 1.53e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  392 PAPTTPKKPAPTTPKEPAPTTPkePAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEP 471
Cdd:PRK14971   370 SGGRGPKQHIKPVFTQPAAAPQ--PSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQAV 447

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  472 APTTPKEPAPTTTKSAPTTtkepAPTTTKsaPTTPKEPAPTAPKKPAPTTPK 523
Cdd:PRK14971   448 RPAQFKEEKKIPVSKVSSL----GPSTLR--PIQEKAEQATGNIKEAPTGTQ 493

PRK12373

NADH-quinone oxidoreductase subunit E;

316-433

1.54e-03

NADH-quinone oxidoreductase subunit E;

Pssm-ID: 237082 [Multi-domain] Cd Length: 400 Bit Score: 42.48 E-value: 1.54e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  316 ASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPT 395
Cdd:PRK12373   208 ASKALAEDIGDTVKRIDGTEVPLLAPWQGDAAPVPPSEAARPKSADAETNAALKTPATAPKAAAKNAKAPEAQPVSGTAA 287

                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 2468437868  396 TPKKPAPTTPKEPAPTtpkepAPTTPKEPAPTTTKEPA 433
Cdd:PRK12373   288 AEPAPKEAAKAAAAAA-----KPALEDKPRPLGIARPG 320

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

495-558

1.67e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.57 E-value: 1.67e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2468437868  495 APTTTKSAPTTPKEPAPTAPkkPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAP 558
Cdd:TIGR00601   83 KVAPPAATPTSAPTPTPSPP--ASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGS 144

PRK12373

NADH-quinone oxidoreductase subunit E;

428-557

1.67e-03

NADH-quinone oxidoreductase subunit E;

Pssm-ID: 237082 [Multi-domain] Cd Length: 400 Bit Score: 42.48 E-value: 1.67e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  428 TTKEPA--PTTPKEPAPTTTKSAPTTPKEPAPTTPKKP----VPTTP---KEPAPTTPKEPAPTTTKSAPTTTKEPAPTT 498
Cdd:PRK12373   186 YASEPAggLTSLTEEAGKARYNASKALAEDIGDTVKRIdgteVPLLApwqGDAAPVPPSEAARPKSADAETNAALKTPAT 265

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  499 TKSAPTTPKepapTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPA 557
Cdd:PRK12373   266 APKAAAKNA----KAPEAQPVSGTAAAEPAPKEAAKAAAAAAKPALEDKPRPLGIARPG 320

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

395-507

1.71e-03

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 42.53 E-value: 1.71e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  395 TTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPtttksAPTTPKEPAPtTPKKPVPTTPKEPAPT 474
Cdd:COG3266    265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAA-----APAEAAAPQP-TAAKPVVTETAAPAAP 338

                           90       100       110
                   ....*....|....*....|....*....|...
gi 2468437868  475 TPKEPAptttksaptttKEPAPTTTKSAPTTPK 507
Cdd:COG3266    339 APEAAA-----------AAAAPAAPAVAKKLAA 360

PspC_subgroup_1

NF033838

pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ...

336-469

1.75e-03

Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 42.69 E-value: 1.75e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  336 KEPAPTTPKEPAPTTPKepAPTTTKSAPTTPMEPAPTTPKEPAPTTT-KSAPTTPMEPAPTTPKKPAPTT-PKEPAPTTP 413
Cdd:NF033838   359 KEEAKEPRNEEKIKQAK--AKVESKKAEATRLEKIKTDRKKAEEEAKrKAAEEDKVKEKPAEQPQPAPAPqPEKPAPKPE 436

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  414 KEPAPTTPKEPAPTTTKEP-APTTPKEPAPTTTKSAPTTPKEPApttpkkpvPTTPK 469
Cdd:NF033838   437 KPAEQPKAEKPADQQAEEDyARRSEEEYNRLTQQQPPKTEKPAQ--------PSTPK 485

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

357-431

1.80e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.57 E-value: 1.80e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2468437868  357 TTTKSAPTTPMEPAPTTPKEPAPTttksaPTTPmePAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKE 431
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPT-----PSPP--ASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142

motB

PRK12799

flagellar motor protein MotB; Reviewed

443-568

1.81e-03

flagellar motor protein MotB; Reviewed

Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 42.40 E-value: 1.81e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  443 TTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSaPTTPKEPAPTAPKKPAPTTP 522
Cdd:PRK12799   296 HGTVPVAAVTPSSAVTQSSAITPSSAAIPSPAVIPSSVTTQSATTTQASAVALSSAGVL-PSDVTLPGTVALPAAEPVNM 374

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*.
gi 2468437868  523 KEPAPTTPKEPAPTTTKSAPTTPKepsPTTTKEPAPTTPKEPAPTT 568
Cdd:PRK12799   375 QPQPMSTTETQQSSTGNITSTANG---PTTSLPAAPASNIPVSPTS 417

Aim21

pfam11489

Altered inheritance of mitochondria protein 21; This is a family of proteins conserved in ...

293-651

1.86e-03

Altered inheritance of mitochondria protein 21; This is a family of proteins conserved in yeasts. Saccharomyces cerevisiae Aim21 may be involved in mitochondrial migration along actin filament. It may also interact with ribosomes.

Pssm-ID: 371558 [Multi-domain] Cd Length: 677 Bit Score: 42.65 E-value: 1.86e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  293 ETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPT 372
Cdd:pfam11489  254 GTASTGSGLGTSKEVDGTPEEQVGYIAPEEYTSRPSSPAPQSSSASPSGESGEEERDWYEEPILASDEVAKEPAGEEPAV 333

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  373 TP--------KEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTT 444
Cdd:pfam11489  334 SPsfereeivKYEVKSRTESVPESREESKIASIHGSVPSLARHTPLEDVEEYEPLFPEDDSEGAVKKPTEESSRFKRPEL 413

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  445 TKSAPTTPKEPAPTTPKKPVPT--TPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAP-----KKP 517
Cdd:pfam11489  414 NHRFPSEDVWEDSPSSLQLTATvsTPSNPPPRAFETPEQETSSSSSEPSLDDQSELKSEDVKERPEVKAQRFpsrdvWED 493

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  518 APTTPKEPAPTTPKEPAPTTTKSAPTTPKEPS-PTTTKEPAPTTPKEPaPTTPKKPAPTTPKETAPTTPKEPAPTTTKKP 596
Cdd:pfam11489  494 APESQELVTTVETPDEVKSTSPGVPTKPAIPArPKSGKPTSPTEKRKP-PPVPKKPKPQIPARPAKAQPQQAGEEFKPKP 572

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  597 APTTpkepAPTTPKETAPTTP--------EKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEE 651
Cdd:pfam11489  573 RVPA----RPGGSKISALRAGfasdlngrLQLGPQAPKKVVEEDKEPSEEKGDKEEEEDTKEK 631

PRK10905

cell division protein DamX; Validated

316-505

1.91e-03

cell division protein DamX; Validated

Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 42.23 E-value: 1.91e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  316 ASTTPKEPTATTIKSAPTTPKEPAPTTPKE---------PAPTTPKEPAPTTTKSAPTT-PMEPAPTTP--KEPAPTTTK 383
Cdd:PRK10905    64 AGNTQQDVSLPPISSTPTQGQTPVATDGQQrvevqgdlnNALTQPQNQQQLNNVAVNSTlPTEPATVAPvrNGNASRQTA 143

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  384 SAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPapttpkepaptttkEPAPTTPKEPAPTTTksaPTTPKEPAPTTPKKP 463
Cdd:PRK10905   144 KTQTAERPATTRPARKQAVIEPKKPQATAKTEP--------------KPVAQTPKRTEPAAP---VASTKAPAATSTPAP 206

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|..
gi 2468437868  464 VPTTPKEPAPTTpkEPAPTTTKSAPTTTKEPAPTTTKSAPTT 505
Cdd:PRK10905   207 KETATTAPVQTA--SPAQTTATPAAGGKTAGNVGSLKSAPSS 246

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

277-363

1.95e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 42.96 E-value: 1.95e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  277 DLAPTSkvLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAP 356
Cdd:PRK12270    35 DYGPGS--TAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAA 112


                   ....*..
gi 2468437868  357 TTTKSAP 363
Cdd:PRK12270   113 VEDEVTP 119

PHA03377

EBNA-3C; Provisional

286-692

2.00e-03

EBNA-3C; Provisional

Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 42.73 E-value: 2.00e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  286 AKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAP--TTPKEPAPTTTKSAP 363
Cdd:PHA03377   530 AKPHRKVQDGFQRSGRRQKRATPPKVSPSDRGPPKASPPVMAPPSTGPRVMATPSTGPRDMAPpsTGPRQQAKCKDGPPA 609

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  364 TTP--MEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPK-------KPAPTTPKEPAPTTPKEPAPTTPKEPAPTTtkepAP 434
Cdd:PHA03377   610 SGPheKQPPSSAPRDMAPSVVRMFLRERLLEQSTGPKpksfwemRAGRDGSGIQQEPSSRRQPATQSTPPRPSW----LP 685

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  435 TTPKEPAPTTTKSAPTTPKEPAPTTPKKPVpTTPKEPAPTTPKEPAPTTTKSAPTTTKEP-APTTTKSAPTTPKEPAPTA 513
Cdd:PHA03377   686 SVFVLPSVDAGRAQPSEESHLSSMSPTQPI-SHEEQPRYEDPDDPLDLSLHPDQAPPPSHqAPYSGHEEPQAQQAPYPGY 764

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  514 PKKPAPTTP-----KEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKep 588
Cdd:PHA03377   765 WEPRPPQAPylgyqEPQAQGVQVSSYPGYAGPWGLRAQHPRYRHSWAYWSQYPGHGHPQGPWAPRPPHLPPQWDGSAG-- 842

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  589 APTTTKKPAPTTPKEPAPTTPKET-APTTPEKLTPTTPEKLAPTTPEEPAPTTP---EEPAPTTPEEPAPTTLEEPTPTT 664
Cdd:PHA03377   843 HGQDQVSQFPHLQSETGPPRLQLSqVPQLPYSQTLVSSSAPSWSSPQPRAPIRPiptRFPPPPMPLQDSMAVGCDSSGTA 922

                          410       420
                   ....*....|....*....|....*...
gi 2468437868  665 PEEPAPTTPKTAAPNTPKEPAPTTPKEP 692
Cdd:PHA03377   923 CPSMPFASDYSQGAFTPLDINAQTPKRP 950

PRK14954

DNA polymerase III subunits gamma and tau; Provisional

441-559

2.00e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 42.62 E-value: 2.00e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  441 APTTTKSAPTTPKEPAPttpkkPVPTTPKEPAPTTPKEPAPtttksaptttkEPAPTTTKSAPTTPKEPAPTAPKKPAPT 520
Cdd:PRK14954   381 APSPAGSPDVKKKAPEP-----DLPQPDRHPGPAKPEAPGA-----------RPAELPSPASAPTPEQQPPVARSAPLPP 444

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2468437868  521 TPKEPAPTTPKEPAPTT----------------TKSAPTTPKEPSPTTTKEPAPT 559
Cdd:PRK14954   445 SPQASAPRNVASGKPGVdlgswqgkfmnftrngSRKQPVQASSSDAAQTGVFEGV 499

PRK10905

cell division protein DamX; Validated

317-521

2.09e-03

cell division protein DamX; Validated

Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 41.85 E-value: 2.09e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  317 STTPKEPTATTIKS----------APTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKE--PAPTTTKS 384
Cdd:PRK10905    24 STSSSDQTASGEKSidlagnatdqANGVQPAPGTTSAEQTAGNTQQDVSLPPISSTPTQGQTPVATDGQQrvEVQGDLNN 103

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  385 APTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEP----APTTTKSAPTTPKEPAPTTP 460
Cdd:PRK10905   104 ALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTAKTQTAERPATTRPARKqaviEPKKPQATAKTEPKPVAQTP 183

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  461 KKPVPTTPKEPA--PTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTT 521
Cdd:PRK10905   184 KRTEPAAPVASTkaPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSLKSAPSS 246

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

744-839

2.12e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 42.57 E-value: 2.12e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  744 KPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKETASTTPKGTAPTtlk 823
Cdd:PRK12270    37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV--- 113

                           90
                   ....*....|....*.
gi 2468437868  824 ePAPTTPKKPAPKELA 839
Cdd:PRK12270   114 -EDEVTPLRGAAAAVA 128

PRK11907

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;

382-480

2.18e-03

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;

Pssm-ID: 237019 [Multi-domain] Cd Length: 814 Bit Score: 42.53 E-value: 2.18e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  382 TKSAPTTPMEPAPTTPKKPAPTTPK-EPAPTTPKEPAPTTPKEpapTTTKEPAPTTPKEPAPTTTKSAPTTPK-----EP 455
Cdd:PRK11907     7 SKSAVALTLALLTASNPKLAQAEEIvTTTPATSTEAEQTTPVE---SDATEEADNTETPVAATTAAEAPSSSEtaetsDP 83

                           90       100
                   ....*....|....*....|....*
gi 2468437868  456 APTTPKKPVPTTPKEPAPTTPKEPA 480
Cdd:PRK11907    84 TSEATDTTTSEARTVTPAATETSKP 108

SAV_2336_NTERM

NF041121

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...

338-419

2.18e-03

Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 42.30 E-value: 2.18e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  338 PAPTTPKEPAPTTPKEPAPTTTksaPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPA 417
Cdd:NF041121    19 AAPPSPEGPAPTAASQPATPPP---PAAPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAPGAALPVRVPA 95


                   ..
gi 2468437868  418 PT 419
Cdd:NF041121    96 PP 97

flhF

PRK06995

flagellar biosynthesis protein FlhF;

347-450

2.21e-03

flagellar biosynthesis protein FlhF;

Pssm-ID: 235904 [Multi-domain] Cd Length: 484 Bit Score: 42.26 E-value: 2.21e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  347 APTTPKEPAPTTTKSAPTTPMEPAPTTP-KEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTtpkEPA 425
Cdd:PRK06995    52 APPAAAAPAAAQPPPAAAPAAVSRPAAPaAEPAPWLVEHAKRLTAQREQLVARAAAPAAPEAQAPAAPAERAAA---ENA 128

                           90       100
                   ....*....|....*....|....*
gi 2468437868  426 PTTTKEPAPTTPKEPAPTTTKSAPT 450
Cdd:PRK06995   129 ARRLARAAAAAPRPRVPADAAAAVA 153

PRK10905

cell division protein DamX; Validated

504-616

2.26e-03

cell division protein DamX; Validated

Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 41.85 E-value: 2.26e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  504 TTPKEPAPTAPKKPApTTPKEPAPTTPKEPAPTT---TKSAPTTPKEPSPTTTKEPapttpkEPAPTTPKKPAPTTPKET 580
Cdd:PRK10905   122 TLPTEPATVAPVRNG-NASRQTAKTQTAERPATTrpaRKQAVIEPKKPQATAKTEP------KPVAQTPKRTEPAAPVAS 194

                           90       100       110
                   ....*....|....*....|....*....|....*.
gi 2468437868  581 APTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 616
Cdd:PRK10905   195 TKAPAATSTPAPKETATTAPVQTASPAQTTATPAAG 230

PRK12323

DNA polymerase III subunit gamma/tau;

540-726

2.28e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.56 E-value: 2.28e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  540 SAPTTPKE-PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPkepaptttkkpaptTPKEPAPTTPKETAPTTPE 618
Cdd:PRK12323   372 AGPATAAAaPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARA--------------VAAAPARRSPAPEALAAAR 437

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  619 KLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPntPKEPAPTTPKEPAPT--- 695
Cdd:PRK12323   438 QASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPP--PWEELPPEFASPAPAqpd 515

                          170       180       190
                   ....*....|....*....|....*....|....
gi 2468437868  696 ---TPKETAPTTPKGTAPTTLKEPAPTTPKKPAP 726
Cdd:PRK12323   516 aapAGWVAESIPDPATADPDDAFETLAPAPAAAP 549

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

778-869

2.30e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 42.49 E-value: 2.30e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  778 APTTPKGTAPTTPKGTAPTTPKGTAPTTPKETASTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKKPTSTTSDKPAPT 857
Cdd:PRK14950   361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAIPVDE 440

                           90
                   ....*....|..
gi 2468437868  858 IPKETAPTIPKE 869
Cdd:PRK14950   441 KPKYTPPAPPKE 452

PHA03247

large tegument protein UL36; Provisional

331-498

2.31e-03

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 2.31e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  331 APTTPKEPAPTTPKEPAPTTPKE-------------PAPTTTKSAPTT-PMEPAPT-TPKEPAPTTTKSAPTTPMEPAPT 395
Cdd:PHA03247   303 AGAPLALPAPPDPPPPAPAGDAEeeddedgamevvsPLPRPRQHYPLGfPKRRRPTwTPPSSLEDLSAGRHHPKRASLPT 382

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  396 TPKKPAP-------TTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTttksaPTTPKEPAPTTPKKPVPTTP 468
Cdd:PHA03247   383 RKRRSARhaatpfaRGPGGDDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPS-----AEPGSDDGPAPPPERQPPAP 457

                          170       180       190
                   ....*....|....*....|....*....|
gi 2468437868  469 KEPAPTTPKEPAPTTTKSAPTTTKEPAPTT 498
Cdd:PHA03247   458 ATEPAPDDPDDATRKALDALRERRPPEPPG 487

PHA03269

envelope glycoprotein C; Provisional

324-466

2.36e-03

envelope glycoprotein C; Provisional

Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 42.41 E-value: 2.36e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  324 TATTIKSAPTTPKEPAPTTPKEPAPTTPK-EPAPTTTKSAPTTPmepapttpkEPAPTTTKSAPTTP---MEPAPTTPKK 399
Cdd:PHA03269    11 TIACINLIIANLNTNIPIPELHTSAATQKpDPAPAPHQAASRAP---------DPAVAPTSAASRKPdlaQAPTPAASEK 81

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2468437868  400 PAPTTPKEPAPTTPKEP--APTTPKEPAPTTTKEP--APTTPKEPAPTTTKSAPTTPkEPAPTTPKKPVPT 466
Cdd:PHA03269    82 FDPAPAPHQAASRAPDPavAPQLAAAPKPDAAEAFtsAAQAHEAPADAGTSAASKKP-DPAAHTQHSPPPF 151

PRK14971

DNA polymerase III subunit gamma/tau;

512-650

2.38e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 42.46 E-value: 2.38e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  512 TAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTtpkePSPTTTKEPAPTTPKEPAPTtpkkPAPTTPKETAPTTpkepaPT 591
Cdd:PRK14971   368 DASGGRGPKQHIKPVFTQPAAAPQPSAAAAAS----PSPSQSSAAAQPSAPQSATQ----PAGTPPTVSVDPP-----AA 434

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  592 TTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPE 650
Cdd:PRK14971   435 VPVNPPSTAPQAVRPAQFKEEKKIPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTGTQ 493

PRK13808

adenylate kinase; Provisional

393-523

2.44e-03

adenylate kinase; Provisional

Pssm-ID: 172341 [Multi-domain] Cd Length: 333 Bit Score: 41.80 E-value: 2.44e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  393 APTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTT--TKEPAPTTPKEPAPTTTKSAPTTPKepaptTPKKPVPTTPKE 470
Cdd:PRK13808   199 AKKAAKTPAAKSGAKKASAKAKSAAKKVSKKKAAKTavSAKKAAKTAAKAAKKAKKTAKKALK-----KAAKAVKKAAKK 273

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  471 PAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPK 523
Cdd:PRK13808   274 AAKAAAKAAKGAAKATKGKAKAKKKAGKKAAAGSKAKATAKAPKRGAKGKKAK 326

PRK14954

DNA polymerase III subunits gamma and tau; Provisional

378-449

2.44e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 42.24 E-value: 2.44e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  378 APTTTKSAPT---TPMEPAPTTPKKPAPTTPKEPAPTTPKEPAP---TTPKEPAPTTTKEPAPTTPK-EPAPTTTKSAP 449
Cdd:PRK14954   381 APSPAGSPDVkkkAPEPDLPQPDRHPGPAKPEAPGARPAELPSPasaPTPEQQPPVARSAPLPPSPQaSAPRNVASGKP 459

COG5373

Uncharacterized membrane protein [Function unknown];

454-529

2.45e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 42.29 E-value: 2.45e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2468437868  454 EPAPTTPKKPVPTTPKEPAPTTPKEPAPTTtksaptttkEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTT 529
Cdd:COG5373     38 AEAAEAASAPAEPEPEAAAAATAAAPEAAP---------APVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAA 104

PRK13042

superantigen-like protein SSL4; Reviewed;

357-438

2.51e-03

superantigen-like protein SSL4; Reviewed;

Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 41.54 E-value: 2.51e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  357 TTTKSA-PTTPMEPAPTTPKEPAPTTTKSAPTTpmEPAPTTPKKPAPTTPKE-PAPTTPKEPAPTTPKepAPTTTKEPAP 434
Cdd:PRK13042    23 TTTQAAnATTPSSTKVEAPQSTPPSTKVEAPQS--KPNATTPPSTKVEAPQQtPNATTPSSTKVETPQ--SPTTKQVPTE 98


                   ....
gi 2468437868  435 TTPK 438
Cdd:PRK13042    99 INPK 102

PRK14954

DNA polymerase III subunits gamma and tau; Provisional

365-442

2.54e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 42.24 E-value: 2.54e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  365 TPMEPAPTTPKEPAPtttkSAPTTPMEPAPTTPKKPAPTTPKEPAP---TTPKEPAPTTPKEPAPTTTKEPAPTTPKEPA 441
Cdd:PRK14954   383 SPAGSPDVKKKAPEP----DLPQPDRHPGPAKPEAPGARPAELPSPasaPTPEQQPPVARSAPLPPSPQASAPRNVASGK 458


                   .
gi 2468437868  442 P 442
Cdd:PRK14954   459 P 459

Pneumo_att_G

pfam05539

Pneumovirinae attachment membrane glycoprotein G;

496-649

2.65e-03

Pneumovirinae attachment membrane glycoprotein G;

Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 41.96 E-value: 2.65e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  496 PTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTkepaPTTPKEPAPTTPKKPAPT 575
Cdd:pfam05539  169 KTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTT----SSNPEPQTEPPPSQRGPS 244

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2468437868  576 TPKETAPTTP--KEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTtpeePAPTTPEEPAPTTP 649
Cdd:pfam05539  245 GSPQHPPSTTsqDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQETGRPT----PRPTATTQSGSSPP 316

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

359-432

2.70e-03

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.98 E-value: 2.70e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2468437868  359 TKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEP 432
Cdd:PTZ00144   120 TGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193

flhF

PRK06995

flagellar biosynthesis protein FlhF;

361-466

2.71e-03

flagellar biosynthesis protein FlhF;

Pssm-ID: 235904 [Multi-domain] Cd Length: 484 Bit Score: 41.88 E-value: 2.71e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  361 SAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPA-PTTPKEPAPTTPKEPAPTTPKEPAPtttkePAPTTPKE 439
Cdd:PRK06995    52 APPAAAAPAAAQPPPAAAPAAVSRPAAPAAEPAPWLVEHAKrLTAQREQLVARAAAPAAPEAQAPAA-----PAERAAAE 126

                           90       100
                   ....*....|....*....|....*..
gi 2468437868  440 PAPTTTKSAPTTPKEPAPTTPKKPVPT 466
Cdd:PRK06995   127 NAARRLARAAAAAPRPRVPADAAAAVA 153

motB

PRK12799

flagellar motor protein MotB; Reviewed

352-467

2.79e-03

flagellar motor protein MotB; Reviewed

Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 42.01 E-value: 2.79e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  352 KEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKE 431
Cdd:PRK12799   299 VPVAAVTPSSAVTQSSAITPSSAAIPSPAVIPSSVTTQSATTTQASAVALSSAGVLPSDVTLPGTVALPAAEPVNMQPQP 378

                           90       100       110
                   ....*....|....*....|....*....|....*....
gi 2468437868  432 PAPTTPKEPAP---TTTKSAPTTPKEPAPTTPKKPVPTT 467
Cdd:PRK12799   379 MSTTETQQSSTgniTSTANGPTTSLPAAPASNIPVSPTS 417

Chi1

COG3469

Chitinase [Carbohydrate transport and metabolism];

323-541

2.81e-03

Chitinase [Carbohydrate transport and metabolism];

Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 42.05 E-value: 2.81e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  323 PTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPkEPAPTTTKSAPTTPMEPAPTTPKKPAP 402
Cdd:COG3469     14 GASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTA-ASSTAATSSTTSTTATATAAAAAATST 92

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  403 TTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPkepapt 482
Cdd:COG3469     93 SATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGTTTT------ 166

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2468437868  483 ttksaptttkePAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPA--PTTPKEPAPTTTKSA 541
Cdd:COG3469    167 -----------STTTTTTSASTTPSATTTATATTASGATTPSATttATTTGPPTPGLPKHV 216

PAT1

pfam09770

Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ...

391-637

2.87e-03

Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.

Pssm-ID: 401645 [Multi-domain] Cd Length: 846 Bit Score: 42.33 E-value: 2.87e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  391 EPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPT---TTKEPapttpkEPAPTTTKSAP---TTPKEPAPTTPKKPV 464
Cdd:pfam09770  106 QPAARAAQSSAQPPASSLPQYQYASQQSQQPSKPVRTgyeKYKEP------EPIPDLQVDASlwgVAPKKAAAPAPAPQP 179

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  465 PTTPKEPAPTTPK-------EPAPTTTKSAPTTTKEPAPTTTKSAPttPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTT 537
Cdd:pfam09770  180 AAQPASLPAPSRKmmsleevEAAMRAQAKKPAQQPAPAPAQPPAAP--PAQQAQQQQQFPPQIQQQQQPQQQPQQPQQHP 257

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  538 TKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT--TPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPT 615
Cdd:pfam09770  258 GQGHPVTILQRPQSPQPDPAQPSIQPQAQQFHQQPPPVpvQPTQILQNPNRLSAARVGYPQNPQPGVQPAPAHQAHRQQG 337

                          250       260
                   ....*....|....*....|....
gi 2468437868  616 TPEKLTP--TTPEKLAPTTPEEPA 637
Cdd:pfam09770  338 SFGRQAPiiTHPQQLAQLSEEEKA 361

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

338-397

2.89e-03

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.98 E-value: 2.89e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  338 PAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTP 397
Cdd:PTZ00144   122 GAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTP 181

FimV

COG3170

Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];

415-653

2.91e-03

Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];

Pssm-ID: 442403 [Multi-domain] Cd Length: 508 Bit Score: 42.09 E-value: 2.91e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  415 EPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPttpkEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEP 494
Cdd:COG3170    105 DPPAYAAAAAAPAAAPAPAPAAPAAAAAAADQPAA----EAAPAASGEYYPVRPGDTLWSIAARPVRPSSGVSLDQMMVA 180

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  495 APTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTK-SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA 573
Cdd:COG3170    181 LYRANPDAFIDGNINRLKAGAVLRVPAAEEVAALSPAEARQEVQAqSADWAAYRARLAAAVEPAPAAAAPAAPPAAAAAA 260

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  574 PTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETA-PTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEP 652
Cdd:COG3170    261 GPVPAAAEDTLSPEVTAAAAAEEADALPEAAAELAERLAAlEAQLAELQRLLALKNPAPAAAVSAPAAAAAAATVEAAAP 340


                   .
gi 2468437868  653 A 653
Cdd:COG3170    341 A 341

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

289-543

2.92e-03

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 42.37 E-value: 2.92e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  289 TPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEP-APTTPKEP-APTTPKEP------------ 354
Cdd:PTZ00449   602 SAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPPPPQRPSSPERPEGPkIIKSPKPPkSPKPPFDPkfkekfyddyld 681

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  355 APTTTKSAPTTPM--EPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAP--TTPKEPAPTTPKEPAPTTPKEPAPTTTK 430
Cdd:PTZ00449   682 AAAKSKETKTTVVldESFESILKETLPETPGTPFTTPRPLPPKLPRDEEFpfEPIGDPDAEQPDDIEFFTPPEEERTFFH 761

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  431 EPAPTTP-----KEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPA--PTTPKEPAPTTTKSAPTTTKEPAP------- 496
Cdd:PTZ00449   762 ETPADTPlpdilAEEFKEEDIHAETGEPDEAMKRPDSPSEHEDKPPGdhPSLPKKRHRLDGLALSTTDLESDAgriakda 841

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  497 ----------------TTTKSA-------------------------PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAP 535
Cdd:PTZ00449   842 sgkivklkrsksfddlTTVEEAeemgaearkivvdddgteaddedthPPEEKHKSEVRRRRPPKKPSKPKKPSKPKKPKK 921


                   ....*...
gi 2468437868  536 TTTKSAPT 543
Cdd:PTZ00449   922 PDSAFIPS 929

FimV

COG3170

Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];

377-608

3.01e-03

Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];

Pssm-ID: 442403 [Multi-domain] Cd Length: 508 Bit Score: 42.09 E-value: 3.01e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  377 PAPTTTKSAPTTPMEPAPTTP-------KKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAP 449
Cdd:COG3170    107 PAYAAAAAAPAAAPAPAPAAPaaaaaaaDQPAAEAAPAASGEYYPVRPGDTLWSIAARPVRPSSGVSLDQMMVALYRANP 186

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  450 TTPKEPAPTTPKK----PVPTTpkEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEP 525
Cdd:COG3170    187 DAFIDGNINRLKAgavlRVPAA--EEVAALSPAEARQEVQAQSADWAAYRARLAAAVEPAPAAAAPAAPPAAAAAAGPVP 264

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  526 APT----TPKEPAPTTTKSAPTTPKEPSPTTTK----EPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPA 597
Cdd:COG3170    265 AAAedtlSPEVTAAAAAEEADALPEAAAELAERlaalEAQLAELQRLLALKNPAPAAAVSAPAAAAAAATVEAAAPAAAA 344

                          250
                   ....*....|.
gi 2468437868  598 PTTPKEPAPTT 608
Cdd:COG3170    345 QPAAAAPAPAL 355

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

497-567

3.02e-03

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.59 E-value: 3.02e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2468437868  497 TTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPT 567
Cdd:PTZ00144   120 TGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRET 190

Agg_substance

NF033875

LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, ...

345-480

3.04e-03

Pssm-ID: 411439 [Multi-domain] Cd Length: 1306 Bit Score: 42.39 E-value: 3.04e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  345 EPAPTT--PKEPAPTTTKSAPTTPMEPAPTTPKEpapttTKSAPTTPMEPAPTtpKKPAPTTPKEPAPTT----PKEPAP 418
Cdd:NF033875    49 QPGTTTvqPDNPDPQSGSETPKTAVSEEATVQKD-----TTSQPTKVEEVASE--KNGAEQSSATPNDTTnaqqPTVGAE 121

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  419 TTPKEP---APTTTKEPApTTPKEPAPTTTKSAPTT--PKEPAPTTPKKPVPTTPKEPAPTTPKEPA 480
Cdd:NF033875   122 KSAQEQpvvSPETTNEPL-GQPTEVAPAENEANKSTsiPKEFETPDVDKAVDEAKKDPNITVVEKPA 187

COG5373

Uncharacterized membrane protein [Function unknown];

469-546

3.05e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 42.29 E-value: 3.05e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  469 KEPAPTTPKEPAPtttksaptttkEPAPTTTKSAPTTPKEPAPTAPkKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPK 546
Cdd:COG5373     40 AAEAASAPAEPEP-----------EAAAAATAAAPEAAPAPVPEAP-AAPPAAAEAPAPAAAAPPAEAEPAAAPAAAS 105

PHA03378

EBNA-3B; Provisional

429-838

3.10e-03

EBNA-3B; Provisional

Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 41.98 E-value: 3.10e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  429 TKEPAPTtPKEPAPTTTKSAPTTPKEPAPTTPkkpvpttPKEPAPTTPKEPAPTTTKSAPTTTKEPA-PTTTKSAPTTPK 507
Cdd:PHA03378   438 TEQPRAT-PHSQAPTVVLHRPPTQPLEGPTGP-------LSVQAPLEPWQPLPHPQVTPVILHQPPAqGVQAHGSMLDLL 509

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  508 EPAPTAPKKPAPTTPKEPAPttpkePAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTtpkETAPTTPKE 587
Cdd:PHA03378   510 EKDDEDMEQRVMATLLPPSP-----PQPRAGRRAPCVYTEDLDIESDEPASTEPVHDQLLPAPGLGPL---QIQPLTSPT 581

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  588 PAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEE 667
Cdd:PHA03378   582 TSQLASSAPSYAQTPWPVPHPSQTPEPPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITFNVLVFPTPHQPPQVEITP 661

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  668 PAPTTPKTaaPNTPKEPAPTTPkepapttpketAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAP 747
Cdd:PHA03378   662 YKPTWTQI--GHIPYQPSPTGA-----------NTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPA 728

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  748 TTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKGTAPTT---PKETASTTPK---GTAPTT 821
Cdd:PHA03378   729 AAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPqqrPRGAPTPQPPpqaGPTSMQ 808

                          410
                   ....*....|....*..
gi 2468437868  822 LKEPAPTTPKKPAPKEL 838
Cdd:PHA03378   809 LMPRAAPGQQGPTKQIL 825

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

259-415

3.15e-03

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 41.76 E-value: 3.15e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  259 EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEP 338
Cdd:COG3266    213 ASALGEAVAAAAELAALALLAAGAAEVLTARLVLLLLIIGSALKAPSQASSASAPATTSLGEQQEVSLPPAVAAQPAAAA 292

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  339 APTTPKEPAPTTPKEPAPTTtksAPTTPMEPAPtTPKEPAPTTTKSAPTtpmePAPTTPKK-PAPTTPKEPAPTTPKE 415
Cdd:COG3266    293 AAQPSAVALPAAPAAAAAAA---APAEAAAPQP-TAAKPVVTETAAPAA----PAPEAAAAaAAPAAPAVAKKLAADE 362

PRK13042

superantigen-like protein SSL4; Reviewed;

380-461

3.18e-03

superantigen-like protein SSL4; Reviewed;

Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 41.16 E-value: 3.18e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  380 TTTKSA-PTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTkePAPTTPKEPAPTTTKSaPTTPKEPAPT 458
Cdd:PRK13042    23 TTTQAAnATTPSSTKVEAPQSTPPSTKVEAPQSKPNATTPPSTKVEAPQQT--PNATTPSSTKVETPQS-PTTKQVPTEI 99


                   ...
gi 2468437868  459 TPK 461
Cdd:PRK13042   100 NPK 102

COG5373

Uncharacterized membrane protein [Function unknown];

390-461

3.27e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.91 E-value: 3.27e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  390 MEPAPTTPKKPAPTTPKEPAPTTpkEPAPTTPKEPAPtTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPK 461
Cdd:COG5373     37 LAEAAEAASAPAEPEPEAAAAAT--AAAPEAAPAPVP-EAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAAS 105

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

633-728

3.41e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 42.18 E-value: 3.41e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  633 PEEPAPTTPEEPAPTTPEEPApttleeptpttpeepapttpkTAAPNTPKEPAPTTPKEPA--PTTPKETAPTTPKGTAP 710
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAP---------------------AAAPAAKAPAAPAPAPPAAaaPAAPPKPAAAAAAAAAP 96

                           90
                   ....*....|....*...
gi 2468437868  711 TTLKEPAPTTPKKPAPKE 728
Cdd:PRK12270    97 AAPPAAAAAAAPAAAAVE 114

flhF

PRK06995

flagellar biosynthesis protein FlhF;

331-434

3.45e-03

flagellar biosynthesis protein FlhF;

Pssm-ID: 235904 [Multi-domain] Cd Length: 484 Bit Score: 41.88 E-value: 3.45e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  331 APTTPKEPAPTTPK-EPAPTTPKEPAPTTTKSAPtTPMEPA--PTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKE 407
Cdd:PRK06995    52 APPAAAAPAAAQPPpAAAPAAVSRPAAPAAEPAP-WLVEHAkrLTAQREQLVARAAAPAAPEAQAPAAPAERAAAENAAR 130

                           90       100
                   ....*....|....*....|....*..
gi 2468437868  408 PAPTTPKEPAPTTPKEPAPTTTKEPAP 434
Cdd:PRK06995   131 RLARAAAAAPRPRVPADAAAAVADAVK 157

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

386-515

3.59e-03

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 39.27 E-value: 3.59e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  386 PTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSA-PTTPKEPAPTTPKKPV 464
Cdd:pfam02389    8 PCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPePCYPKVPEPCSPKVPE 87

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2468437868  465 PTTPKEPAPttpkePAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPK 515
Cdd:pfam02389   88 PCHPKAPEP-----CHPKVPEPCYPKAPEPCQPKVPEPCPSTVTPGPAQQK 133

motB

PRK05996

MotB family protein;

495-574

3.63e-03

MotB family protein;

Pssm-ID: 235665 [Multi-domain] Cd Length: 423 Bit Score: 41.61 E-value: 3.63e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  495 APTTTKSAPTTPKEPAPTAPKKPAPTTpkEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAP 574
Cdd:PRK05996   190 VEVTTAGDLLPPGQAREQAQGAKSATA--APATVPQAAPLPQAQPKKAATEEELIADAKKAATGEPAANAAKAAKPEPMP 267

PRK13108

prolipoprotein diacylglyceryl transferase; Reviewed

510-711

3.66e-03

prolipoprotein diacylglyceryl transferase; Reviewed

Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 41.50 E-value: 3.66e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  510 APTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPT--TPKEPSPTTTKEPA-PTTPKEPAPTTPKKPAPTTPKETAPTTPK 586
Cdd:PRK13108   275 APKGREAPGALRGSEYVVDEALEREPAELAAAAVasAASAVGPVGPGEPNqPDDVAEAVKAEVAEVTDEVAAESVVQVAD 354

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  587 EPAPTTTKKPAPTTPKEPAPTtPKETAPTTPEKltPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPapttleeptpttpe 666
Cdd:PRK13108   355 RDGESTPAVEETSEADIEREQ-PGDLAGQAPAA--HQVDAEAASAAPEEPAALASEAHDETEPEVP-------------- 417

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*
gi 2468437868  667 epapttpKTAAPntpkEPAPTTPKEPAPTTPkETAPTTPKGTAPT 711
Cdd:PRK13108   418 -------EKAAP----IPDPAKPDELAVAGP-GDDPAEPDGIRRQ 450

rplD

PRK14907

50S ribosomal protein L4; Provisional

519-628

3.66e-03

50S ribosomal protein L4; Provisional

Pssm-ID: 184900 [Multi-domain] Cd Length: 295 Bit Score: 41.09 E-value: 3.66e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  519 PTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTT-PKKPAPTTPKETAPTTPKEPAPTTTKKPA 597
Cdd:PRK14907     2 AETKKTTKKKTTEEKKPAAKKATTSKETAKTKKTAKTTSTKAAKKAAKVKkTKSVKTTTKKVTVKFEKTESVKKESVAKK 81

                           90       100       110
                   ....*....|....*....|....*....|.
gi 2468437868  598 PTTPkePAPTTPKETAPTTPEKLTPTTPEKL 628
Cdd:PRK14907    82 TVKK--EAVSAEVFEASNKLFKNTSKLPKKL 110

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

621-717

3.68e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.80 E-value: 3.68e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  621 TPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPAPttleeptpttpEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKET 700
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAP-----------APPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAA 107

                           90
                   ....*....|....*..
gi 2468437868  701 APTTPKGTAPTTLKEPA 717
Cdd:PRK12270   108 PAAAAVEDEVTPLRGAA 124

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

528-585

3.72e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.42 E-value: 3.72e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2468437868  528 TTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP---TTPKKPAPTTPKETAPTTP 585
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPasaVEEKSPSEESATATAPESP 135

PRK13914

invasion associated endopeptidase;

401-584

3.87e-03

invasion associated endopeptidase;

Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 41.71 E-value: 3.87e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  401 APTTPKEPAPTTPKEPAP--TTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPT--------TPKE 470
Cdd:PRK13914   143 VTSTPVAPTQEVKKETTTqqAAPAAETKTEVKQTTQATTPAPKVAETKETPVVDQNATTHAVKSGDTIwalsvkygVSVQ 222

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  471 PAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTtpKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSP 550
Cdd:PRK13914   223 DIMSWNNLSSSSIYVGQKLAIKQTANTATPKAEV--KTEAPAAEKQAAPVVKENTNTNTATTEKKETTTQQQTAPKAPTE 300

                          170       180       190
                   ....*....|....*....|....*....|....*
gi 2468437868  551 TTTKEPAPTTPKEPAPTTPK-KPAPTTPKETAPTT 584
Cdd:PRK13914   301 AAKPAPAPSTNTNANKTNTNtNTNTNNTNTSTPSK 335

PRK10856

cytoskeleton protein RodZ;

439-541

3.90e-03

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 41.17 E-value: 3.90e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  439 EPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAptttksaptttkePAPTTTKSAPTTPKEPAPTAPKKPA 518
Cdd:PRK10856   160 QSVPLDTSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPA-------------VDPQQNAVVAPSQANVDTAATPAPA 226

                           90       100
                   ....*....|....*....|...
gi 2468437868  519 PTTPKEPAPTTPKEPAPTTTKSA 541
Cdd:PRK10856   227 APATPDGAAPLPTDQAGVSTPAA 249

PRK12757

cell division protein FtsN; Provisional

388-457

3.91e-03

cell division protein FtsN; Provisional

Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.80 E-value: 3.91e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  388 TPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTksAPTTPKEPAP 457
Cdd:PRK12757   111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQ--AVEAPKVEAE 178

PRK10905

cell division protein DamX; Validated

347-576

3.92e-03

cell division protein DamX; Validated

Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 41.08 E-value: 3.92e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  347 APTTPK-EPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPK----------- 414
Cdd:PRK10905    22 APSTSSsDQTASGEKSIDLAGNATDQANGVQPAPGTTSAEQTAGNTQQDVSLPPISSTPTQGQTPVATDgqqrvevqgdl 101

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  415 EPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKE--PAPTTPKEPAPTttksaptttk 492
Cdd:PRK10905   102 NNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTAKTQTAERPATTRPArkQAVIEPKKPQAT---------- 171

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  493 epAPTTTKSAPTTPKEPAPTAPKKPAPTtpkePAPTTPKEPAPTTTKSAPTTpkePSPTTTKEPAPTTPKEPAPTTPKKP 572
Cdd:PRK10905   172 --AKTEPKPVAQTPKRTEPAAPVASTKA----PAATSTPAPKETATTAPVQT---ASPAQTTATPAAGGKTAGNVGSLKS 242


                   ....
gi 2468437868  573 APTT 576
Cdd:PRK10905   243 APSS 246

PRK12757

cell division protein FtsN; Provisional

402-480

4.05e-03

cell division protein FtsN; Provisional

Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.80 E-value: 4.05e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  402 PTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPA 480
Cdd:PRK12757    99 PTQLSEVPYNEQTPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEA 177

PRK12373

NADH-quinone oxidoreductase subunit E;

395-518

4.23e-03

NADH-quinone oxidoreductase subunit E;

Pssm-ID: 237082 [Multi-domain] Cd Length: 400 Bit Score: 41.33 E-value: 4.23e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  395 TTPKKPAPTTPKEPAPTT---PKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPvpttPKEP 471
Cdd:PRK12373   198 TEEAGKARYNASKALAEDigdTVKRIDGTEVPLLAPWQGDAAPVPPSEAARPKSADAETNAALKTPATAPKA----AAKN 273

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*..
gi 2468437868  472 APTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPA 518
Cdd:PRK12373   274 AKAPEAQPVSGTAAAEPAPKEAAKAAAAAAKPALEDKPRPLGIARPG 320

PRK13335

superantigen-like protein SSL3; Reviewed;

328-453

4.33e-03

superantigen-like protein SSL3; Reviewed;

Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 41.27 E-value: 4.33e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  328 IKSAPTTPKEPAPTTPKEPAPTtPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTpkKPAPTTPKe 407
Cdd:PRK13335    54 ITAGANSATTQAANTRQERTPK-LEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQT--TTESTTPK- 129

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 2468437868  408 PAPTTPkepaPTTPKEPAPTTTKEPAPTTPkepaptTTKSAPT--TPK 453
Cdd:PRK13335   130 TKVTTP----PSTNTPQPMQSTKSDTPQSP------TIKQAQTdmTPK 167

PRK13108

prolipoprotein diacylglyceryl transferase; Reviewed

448-653

4.34e-03

prolipoprotein diacylglyceryl transferase; Reviewed

Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 41.50 E-value: 4.34e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  448 APTTPKEPAPTTPKKPVPTTPKEPAPTTpkepaptttksapTTTKEPAPTTTKSAPTTPKEPA-PTAPKKPAPTTPKEPA 526
Cdd:PRK13108   275 APKGREAPGALRGSEYVVDEALEREPAE-------------LAAAAVASAASAVGPVGPGEPNqPDDVAEAVKAEVAEVT 341

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  527 PTTPKEPAPTTTKSAPTTPkePSPTTTKEPAPTTPkEPAPTTPKKPAptTPKETApttpkepaptttkkpaptTPKEPAP 606
Cdd:PRK13108   342 DEVAAESVVQVADRDGEST--PAVEETSEADIERE-QPGDLAGQAPA--AHQVDA------------------EAASAAP 398

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*...
gi 2468437868  607 TTPKETAPTTPEKLTPTTPEKLAPTT-PEEPAPTTPEEPAPtTPEEPA 653
Cdd:PRK13108   399 EEPAALASEAHDETEPEVPEKAAPIPdPAKPDELAVAGPGD-DPAEPD 445

DUF5585

pfam17823

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

518-833

4.36e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 41.48 E-value: 4.36e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  518 APTTPKEP---APTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPT-----------TPKEPAPTTPKKPAPTTPKET--A 581
Cdd:pfam17823   88 AEHTPHGTdlsEPATREGAADGAASRALAAAASSSPSSAAQSLPAaiaalpseafsAPRAAACRANASAAPRAAIAAasA 167

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  582 PTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEP-----APTT 656
Cdd:pfam17823  168 PHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAgtvtaAVGT 247

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  657 LEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPkEPAPTTPKETAPTTPkgtAPTTLKEPAPTTPKKPAPKELAPTTTKE 736
Cdd:pfam17823  248 VTPAALATLAAAAGTVASAAGTINMGDPHARRL-SPAKHMPSDTMARNP---AAPMGAQAQGPIIQVSTDQPVHNTAGEP 323

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  737 PTSTTSDKPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTPK-----GTAPTTPKGTAPTTPKGTAPTTPKETAS 811
Cdd:pfam17823  324 TPSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASPVPVLHTSMipeveATSPTTQPSPLLPTQGAAGPGILLAPEQ 403

                          330       340
                   ....*....|....*....|..
gi 2468437868  812 TTPKGTAPTTLKEPAPTTPKKP 833
Cdd:pfam17823  404 VATEATAGTASAGPTPRSSGDP 425

PRK07003

DNA polymerase III subunit gamma/tau;

547-837

4.40e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 41.76 E-value: 4.40e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  547 EPSPTTTKEPAPTTPKEPAPTTPK-KPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKlTPTTP 625
Cdd:PRK07003   359 EPAVTGGGAPGGGVPARVAGAVPApGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAP-PATAD 437

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  626 EKLAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPktaaPNTPKEPAPTTPKEPAPTTPKETAPTTP 705
Cdd:PRK07003   438 RGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAP----PDAAFEPAPRAAAPSAATPAAVPDARAP 513

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  706 kgTAPTTLKEPAPttPKKPAPKELAPTttkeptsttsdkPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTPKGT 785
Cdd:PRK07003   514 --AAASREDAPAA--AAPPAPEARPPT------------PAAAAPAARAGGAAAALDVLRNAGMRVSSDRGARAAAAAKP 577

                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2468437868  786 APTTPKGTAPTTPKGTAPT-TPKETASTTPKGTAPTTLKEPAPTTPKKPAPKE 837
Cdd:PRK07003   578 AAAPAAAPKPAAPRVAVQVpTPRARAATGDAPPNGAARAEQAAESRGAPPPWE 630

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

377-446

4.45e-03

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 4.45e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  377 PAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTK 446
Cdd:PTZ00144   122 GAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETR 191

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

518-587

4.50e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.03 E-value: 4.50e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  518 APTTPKEPAPTTPKEPAPTTtksapttpkEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKE 587
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSP---------PASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142

2A1904

TIGR00927

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...

370-787

4.72e-03

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]

Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 41.52 E-value: 4.72e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  370 APTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEP-APTtpkepAPTTPKEPAPTTTKEPAPTTPKepapTTTKSA 448
Cdd:TIGR00927   52 AAVSSQQPIKLASRDLSNDEMMMVSSDPPKSSSEMEGEMlAPQ-----ATVGRDEATPSIAMENTPSPPR----RTAKIT 122

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  449 PTTPK---EPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEP 525
Cdd:TIGR00927  123 PTTPKnnySPTAAGTERVKEDTPATPSRALNHYISTSGRQRVKSYTPKPRGEVKSSSPTQTREKVRKYTPSPLGRMVNSY 202

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  526 APTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEpapTTPKKPAPTTPKETAPTTPKEPAPTTTKKPApttpkepa 605
Cdd:TIGR00927  203 APSTFMTMPRSHGITPRTTVKDSEITATYKMLETNPSK---RTAGKTTPTPLKGMTDNTPTFLTREVETDLL-------- 271

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  606 pTTPKETApttpEKLTPTTPEKLAPTTPEEP-------APTTPE----EPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPK 674
Cdd:TIGR00927  272 -TSPRSVV----EKNTLTTPRRVESNSSTNHwglvgknNLTTPQgtvlEHTPATSEGQVTISIMTGSSPAETKASTAAWK 346

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  675 TAAPnTPKEPAPTTPKEPAPTTPKETAPTTpkgtapttlkepAPTTPKKPAPKelaPTTTKEPTSTTSDKPAPTTPKETA 754
Cdd:TIGR00927  347 IRNP-LSRTSAPAVRIASATFRGLEKNPST------------APSTPATPRVR---AVLTTQVHHCVVVKPAPAVPTTPS 410

                          410       420       430
                   ....*....|....*....|....*....|...
gi 2468437868  755 PTTPEETAPTTPEETAPTTPKGTAPTTPKGTAP 787
Cdd:TIGR00927  411 PSLTTALFPEAPSPSPSALPPGQPDLHPKAEYP 443

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

556-702

4.76e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 41.24 E-value: 4.76e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  556 PAPTTPKEPAPTTP-KKPAPTTPKETAPTTPkepaptttkkpapTTPKEPAPTTPKETAPTTPEKLTPTTPEKLAPTTPE 634
Cdd:PRK14951   376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA-------------PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAP 442

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  635 EPAPTTPEEPAPTTPEEPApttleeptpttpeepapTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAP 702
Cdd:PRK14951   443 AAVALAPAPPAQAAPETVA-----------------IPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

411-478

4.76e-03

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 4.76e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  411 TTPKEPA--PTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKE 478
Cdd:PTZ00144   120 TGGAPPAaaPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

372-452

4.89e-03

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 4.89e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  372 TTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTtPKEPAPTTPKEPAPTTTKEPAPTTPKEPaptTTKSAPTT 451
Cdd:PTZ00144   120 TGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASK-PTPPAAAKPPEPAPAAKPPPTPVARADP---RETRVPMS 195


                   .
gi 2468437868  452 P 452
Cdd:PTZ00144   196 R 196

PRK15313

intestinal colonization autotransporter adhesin MisL;

405-476

5.04e-03

intestinal colonization autotransporter adhesin MisL;

Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 41.32 E-value: 5.04e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2468437868  405 PKEPAPTTPKEPAPTTPKEPAPTttkEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTP 476
Cdd:PRK15313   560 PDEPIIPDPVDPVIPDPVIPDPV---DPDPVDPVIPDPVIPDPVDPDPVDPEPVDPVIPDPTIPDIGQSDTP 628

PRK10672

endolytic peptidoglycan transglycosylase RlpA;

339-420

5.25e-03

endolytic peptidoglycan transglycosylase RlpA;

Pssm-ID: 236733 [Multi-domain] Cd Length: 361 Bit Score: 40.82 E-value: 5.25e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  339 APTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPkKPAPTTPkePAPTTPKEPAP 418
Cdd:PRK10672   206 TPSVQPAPAPQGDVLPVSNSTLKSEDPTGAPVTSSGFLGAPTTLAPGVLEGSEPTPTAP-SSAPATA--PAAAAPQAAAT 282


                   ..
gi 2468437868  419 TT 420
Cdd:PRK10672   283 SS 284

flhF

PRK06995

flagellar biosynthesis protein FlhF;

409-520

5.33e-03

flagellar biosynthesis protein FlhF;

Pssm-ID: 235904 [Multi-domain] Cd Length: 484 Bit Score: 41.11 E-value: 5.33e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  409 APTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSA--PTTPKEPAPTTPKKPVPTTPkePAPTTPKEPAptttks 486
Cdd:PRK06995    52 APPAAAAPAAAQPPPAAAPAAVSRPAAPAAEPAPWLVEHAkrLTAQREQLVARAAAPAAPEA--QAPAAPAERA------ 123

                           90       100       110
                   ....*....|....*....|....*....|....
gi 2468437868  487 apttTKEPAPTTTKSAPTTPKEPAPTAPKKPAPT 520
Cdd:PRK06995   124 ----AAENAARRLARAAAAAPRPRVPADAAAAVA 153

PRK04654

sec-independent translocase; Provisional

502-572

5.38e-03

sec-independent translocase; Provisional

Pssm-ID: 135173 [Multi-domain] Cd Length: 214 Bit Score: 40.18 E-value: 5.38e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  502 APTTPKEPAPT----APKKPAPTTPKEPAPTTPKEPAPTTT--KSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP 572
Cdd:PRK04654   138 AHTPVPAPAPViaqaQPIAPAPHQTLVPAPHDTIVPAPHAAhlPSAPATPVSVAPVDAGTSASPTPSEPTKIQEKQP 214

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

330-388

5.64e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.65 E-value: 5.64e-03

                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  330 SAPTTPKEPAPTTPKEPAPTTPkePAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTT 388
Cdd:TIGR00601   81 TGKVAPPAATPTSAPTPTPSPP--ASPASGMSAAPASAVEEKSPSEESATATAPESPST 137

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

494-556

5.66e-03

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.82 E-value: 5.66e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  494 PAPTTTKSAPTTPKEPAPTAPKKPApttPKEPAPTTPKEPAPTTTKSAPTTPKEP----SPTTTKEP 556
Cdd:PTZ00144   130 AAAAAAKAEKTTPEKPKAAAPTPEP---PAASKPTPPAAAKPPEPAPAAKPPPTPvaraDPRETRVP 193

COG5373

Uncharacterized membrane protein [Function unknown];

447-515

5.81e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.14 E-value: 5.81e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  447 SAPTTPKEPAPttpkkPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPK 515
Cdd:COG5373     42 EAASAPAEPEP-----EAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAAS 105

PRK13335

superantigen-like protein SSL3; Reviewed;

495-586

5.92e-03

superantigen-like protein SSL3; Reviewed;

Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 40.88 E-value: 5.92e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  495 APTTTKSAPTTPKEPAPTAPKKPAPTTPK------EPAPTTPKEPAPTTTKSAPTTPKEPSPTTTkePAPTTPKEPAPTT 568
Cdd:PRK13335    58 ANSATTQAANTRQERTPKLEKAPNTNEEKtsaskiEKISQPKQEEQKSLNISATPAPKQEQSQTT--TESTTPKTKVTTP 135

                           90
                   ....*....|....*...
gi 2468437868  569 PKKPAPTTPKETAPTTPK 586
Cdd:PRK13335   136 PSTNTPQPMQSTKSDTPQ 153

PRK14971

DNA polymerase III subunit gamma/tau;

281-414

5.93e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 40.91 E-value: 5.93e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  281 TSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPkePAPTTPKEPAPTTTK 360
Cdd:PRK14971   363 TQKGDDASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPP--TVSVDPPAAVPVNPP 440

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 2468437868  361 SAPTTPMEPAPTTPKEPAPTTTKSApTTPMEPAPTTPKKPAPTTPKEPAPTTPK 414
Cdd:PRK14971   441 STAPQAVRPAQFKEEKKIPVSKVSS-LGPSTLRPIQEKAEQATGNIKEAPTGTQ 493

PRK11907

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;

498-587

6.29e-03

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;

Pssm-ID: 237019 [Multi-domain] Cd Length: 814 Bit Score: 40.99 E-value: 6.29e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  498 TTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPkepAPTTTKSAPTTPKEPSPTTTKEPAPTTpkepAPTTPKKPAPTTP 577
Cdd:PRK11907    28 AEEIVTTTPATSTEAEQTTPVESDATEEADNTE---TPVAATTAAEAPSSSETAETSDPTSEA----TDTTTSEARTVTP 100

                           90
                   ....*....|
gi 2468437868  578 KETAPTTPKE 587
Cdd:PRK11907   101 AATETSKPVE 110

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

540-697

6.30e-03

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 40.52 E-value: 6.30e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  540 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPek 619
Cdd:NF040712   193 GRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEP-- 270

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  620 lTPTTPEKLAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPtpttpeepapttpktAAPNTPKEPAPTTPKEPA--PTTP 697
Cdd:NF040712   271 -DEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEA---------------EEPARPEPPPAPKPKRRRrrASVP 334

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

565-699

6.58e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.95 E-value: 6.58e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  565 APTTPKKPAPTTPKETAPTTPKepaptttkkpapttpkePAPTTPKETAPTTPeklTPTTPEKLAPTTPEEPAPTTPEEP 644
Cdd:PRK14950   361 VPVPAPQPAKPTAAAPSPVRPT-----------------PAPSTRPKAAAAAN---IPPKEPVRETATPPPVPPRPVAPP 420

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  645 APTTPEEpapttleeptpttpeepapttpktaAPNTPKE--PAPTTPKEPAPTTPKE 699
Cdd:PRK14950   421 VPHTPES-------------------------APKLTRAaiPVDEKPKYTPPAPPKE 452

PRK13042

superantigen-like protein SSL4; Reviewed;

498-586

6.72e-03

superantigen-like protein SSL4; Reviewed;

Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 40.39 E-value: 6.72e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  498 TTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTT-PKEPAPTTTKSAPTTPKEPSPTTTkePAPTTPKEPAPTTPKkpAPTT 576
Cdd:PRK13042    17 TTGVITTTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSKPNATTPPSTKVEAPQQT--PNATTPSSTKVETPQ--SPTT 92

                           90
                   ....*....|
gi 2468437868  577 PKETAPTTPK 586
Cdd:PRK13042    93 KQVPTEINPK 102

PRK14959

DNA polymerase III subunits gamma and tau; Provisional

355-479

6.85e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184923 [Multi-domain] Cd Length: 624 Bit Score: 40.82 E-value: 6.85e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  355 APTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPkepapttpkePAPTTPKEPAPTTTKEPAP 434
Cdd:PRK14959   379 SAPSGSAAEGPASGGAATIPTPGTQGPQGTAPAAGMTPSSAAPATPAPSAA----------PSPRVPWDDAPPAPPRSGI 448

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*
gi 2468437868  435 TTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEP 479
Cdd:PRK14959   449 PPRPAPRMPEASPVPGAPDSVASASDAPPTLGDPSDTAEHTPSGP 493

Chi1

COG3469

Chitinase [Carbohydrate transport and metabolism];

440-627

6.90e-03

Chitinase [Carbohydrate transport and metabolism];

Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 40.89 E-value: 6.90e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  440 PAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAP 519
Cdd:COG3469     29 AASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATSTSATLVATSTASGANTG 108

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  520 TTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPkEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPT 599
Cdd:COG3469    109 TSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTT-TTVSGTETATGGTTTTSTTTTTTSASTTPSATTTATA 187

                          170       180
                   ....*....|....*....|....*...
gi 2468437868  600 TPKEPAPTTPKETAPTTPEKLTPTTPEK 627
Cdd:COG3469    188 TTASGATTPSATTTATTTGPPTPGLPKH 215

DUF4045

pfam13254

Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ...

277-419

6.98e-03

Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 40.54 E-value: 6.98e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  277 DLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPaPTTPKEPAPTTPKEPAP 356
Cdd:pfam13254  199 SFKEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEADTLSTDKEQSPAPTSASEP-PPKTKELPKDSEEPAAP 277

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2468437868  357 TTTKSAPTTPMEPAPT-TPKEPAPtttKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 419
Cdd:pfam13254  278 SKSAEASTEKKEPDTEsSPETSSE---KSAPSLLSPVSKASIDKPLSSPDRDPLSPKPKPQSPP 338

Pneumo_att_G

pfam05539

Pneumovirinae attachment membrane glycoprotein G;

316-463

7.08e-03

Pneumovirinae attachment membrane glycoprotein G;

Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 40.42 E-value: 7.08e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  316 ASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTpkePAPTTTKSAPTTPMEPAPT 395
Cdd:pfam05539  183 EVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNPEPQTEPPPSQ---RGPSGSPQHPPSTTSQDQS 259

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  396 TPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKP 463
Cdd:pfam05539  260 TTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQETGRPTPRPTATTQSGSSPPHSSPPGVQANP 327

PHA03269

envelope glycoprotein C; Provisional

493-585

7.47e-03

envelope glycoprotein C; Provisional

Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 40.87 E-value: 7.47e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  493 EPAPTTTKSAPTTP---KEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPK-EPSPTTTKEPAPTTPKEPAPTT 568
Cdd:PHA03269    41 DPAPAPHQAASRAPdpaVAPTSAASRKPDLAQAPTPAASEKFDPAPAPHQAASRAPDpAVAPQLAAAPKPDAAEAFTSAA 120

                           90
                   ....*....|....*...
gi 2468437868  569 PKKPAPT-TPKETAPTTP 585
Cdd:PHA03269   121 QAHEAPAdAGTSAASKKP 138

PRK13335

superantigen-like protein SSL3; Reviewed;

359-461

7.55e-03

superantigen-like protein SSL3; Reviewed;

Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 40.49 E-value: 7.55e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  359 TKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKEPaptTPK 438
Cdd:PRK13335    68 TRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQTTTESTTPKTKVTTPPSTNTP---QPM 144

                           90       100
                   ....*....|....*....|...
gi 2468437868  439 EPAPTTTKSAPTTPKEPAPTTPK 461
Cdd:PRK13335   145 QSTKSDTPQSPTIKQAQTDMTPK 167

PRK15313

intestinal colonization autotransporter adhesin MisL;

498-582

7.63e-03

intestinal colonization autotransporter adhesin MisL;

Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 40.94 E-value: 7.63e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  498 TTKSAPTTPKEPAPTAPKKPAPTTPK--EPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPkkpaPT 575
Cdd:PRK15313   555 TSYIEPDEPIIPDPVDPVIPDPVIPDpvDPDPVDPVIPDPVIPDPVDPDPVDPEPVDPVIPDPTIPDIGQSDTP----PI 630


                   ....*..
gi 2468437868  576 TPKETAP 582
Cdd:PRK15313   631 TEHQFRP 637

SAV_2336_NTERM

NF041121

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...

361-443

7.70e-03

Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 40.37 E-value: 7.70e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  361 SAPTTPMEPAPTTPKEPAPTTTksaPTTPMEPAPTTPKKPAPTTPKEPAPtTPKEPAPTTPKEPAPTTTKEPAPTTPKEP 440
Cdd:NF041121    19 AAPPSPEGPAPTAASQPATPPP---PAAPPSPPGDPPEPPAPEPAPLPAP-YPGSLAPPPPPPPGPAGAAPGAALPVRVP 94


                   ...
gi 2468437868  441 APT 443
Cdd:NF041121    95 APP 97

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

407-474

7.92e-03

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.44 E-value: 7.92e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2468437868  407 EPAPTTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPT 474
Cdd:PTZ00144   123 APPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRET 190

PRK07003

DNA polymerase III subunit gamma/tau;

691-864

8.81e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 40.60 E-value: 8.81e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  691 EPAPTTPKETAPTTPkGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKETAPTTPEETAPTTPEETA 770
Cdd:PRK07003   359 EPAVTGGGAPGGGVP-ARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATAD 437

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  771 PTTPKGTAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKETASTTPKGTAPTTLKEPAPTT-PKKPAPKELAPTTTKKPTST 849
Cdd:PRK07003   438 RGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAaAPSAATPAAVPDARAPAAAS 517

                          170
                   ....*....|....*
gi 2468437868  850 TSDKPAPtiPKETAP 864
Cdd:PRK07003   518 REDAPAA--AAPPAP 530

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

336-461

9.16e-03

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 38.11 E-value: 9.16e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  336 KEPAPTTPKEPAPTTPKEPAPTTTKSaPTTPMEPAPTTPKEPAPTTTKSA-PTTPMEPAPTTPKKPAPTTPKEPAPTTPK 414
Cdd:pfam02389    6 KQPCQPPPQEPCVPTTKEPCHSKVPE-PCNPKVPEPCCPKVPEPCCPKVPePCCPKVPEPCCPKVPEPCYPKVPEPCSPK 84

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*....
gi 2468437868  415 EPAPTTPKEPAPTTTKEPAP--TTPKEPAPTTTKSAPTTPKEPAPTTPK 461
Cdd:pfam02389   85 VPEPCHPKAPEPCHPKVPEPcyPKAPEPCQPKVPEPCPSTVTPGPAQQK 133

dnaA

PRK14086

chromosomal replication initiator protein DnaA;

356-570

9.16e-03

chromosomal replication initiator protein DnaA;

Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 40.58 E-value: 9.16e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  356 PTTTKSAPTTPMEPAPTTPKEPAPtttkSAPTTPMEPAPTTPKKPAPTTPKEPAPTT-PKEPAPTTPKEPAPTttkepaP 434
Cdd:PRK14086    90 PSAGEPAPPPPHARRTSEPELPRP----GRRPYEGYGGPRADDRPPGLPRQDQLPTArPAYPAYQQRPEPGAW------P 159

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  435 TTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEP-APTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPkePAPTA 513
Cdd:PRK14086   160 RAADDYGWQQQRLGFPPRAPYASPASYAPEQERDREPyDAGRPEYDQRRRDYDHPRPDWDRPRRDRTDRPEPP--PGAGH 237

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 2468437868  514 PKKPAPttpkePAPTTPKEPAPTTTKSAPTTPKEPSptttkEPAPTTPKEPAPTTPK 570
Cdd:PRK14086   238 VHRGGP-----GPPERDDAPVVPIRPSAPGPLAAQP-----APAPGPGEPTARLNPK 284

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

339-407

9.48e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.26 E-value: 9.48e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  339 APTTPKEPAPTTPKEPAPTTtksapttpmEPAPTTPKEPAPTTTKSAPTTPMEPAPTT-PKKPAPTTPKE 407
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSP---------PASPASGMSAAPASAVEEKSPSEESATATaPESPSTSVPSS 142

PRK10856

cytoskeleton protein RodZ;

337-425

9.74e-03

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 40.01 E-value: 9.74e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  337 EPAPTTPKEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKEPAPTTTKSAPTTPMEPAPTTPKKPAPTTPKEPAPTTPKEP 416
Cdd:PRK10856   160 QSVPLDTSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPT 239


                   ....*....
gi 2468437868  417 APTTPKEPA 425
Cdd:PRK10856   240 DQAGVSTPA 248

PTZ00441

sporozoite surface protein 2 (SSP2); Provisional

335-477

9.89e-03

sporozoite surface protein 2 (SSP2); Provisional

Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 40.33 E-value: 9.89e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2468437868  335 PKEPAPTTPKEPAPTTPKE--PAPTTTKSAPTTPME--PAPTTPKEPAPTTTKSAPTTPME-----PAPTTPKKPAPTTP 405
Cdd:PTZ00441   283 PVEPEPLPVPAPVPPTPEDdnPRPTDDEFAVPNFNEglDVPDNPQDPVPPPNEGKDGNPNEenlfpPGDDEVPDESNVPP 362

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2468437868  406 KEPAP-------TTPKEPAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKSAPTTPKEPAPTTPKKPVPTTPKEPAPTTPK 477
Cdd:PTZ00441   363 NPPNVpggsnseFSSDVENPPNPPNPDIPEQEPNIPEDSNKEVPEDVPMEPEDDRDNNFNEPKKPENKGDGQNEPVIPK 441

Blast search parameters

Data Source:	Precalculated data, version = cdd.v.3.21
Preset Options:	Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01