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Conserved domains on  [gi|164565477|ref|YP_001649193|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Seriatopora caliendrum]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009636)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-325 1.40e-179

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 164761  Cd Length: 327  Bit Score: 499.26  E-value: 1.40e-179
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477   1 MWFTFFYLIKSIIIIIPLLIAVAFLTLAERKILGYMQIRKGPNVVG-GGILQPFADGVKLFIKEMILPHQANKFVYLLAP 79
Cdd:MTH00216   2 MVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGvYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAP 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  80 VISFTLAFFVWGFLPYEKGVSISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISV 159
Cdd:MTH00216  82 VLSFTLALIVWGVIPYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISV 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 160 LLCVGSLSVTEIVLAQNNGIWFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHII 239
Cdd:MTH00216 162 LLCVGSLSITEIVLAQNNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHII 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 240 LMSCLTTIFFLGGWLSPISDFKGGAGWFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVLFGC 319
Cdd:MTH00216 242 LMSCLTTILFLGGWLSPIKYFKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGF 321


                 ....*.
gi 164565477 320 NGPPPI 325
Cdd:MTH00216 322 NGPPPI 327
 
Name Accession Description Interval E-value
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-325 1.40e-179

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 499.26  E-value: 1.40e-179
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477   1 MWFTFFYLIKSIIIIIPLLIAVAFLTLAERKILGYMQIRKGPNVVG-GGILQPFADGVKLFIKEMILPHQANKFVYLLAP 79
Cdd:MTH00216   2 MVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGvYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAP 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  80 VISFTLAFFVWGFLPYEKGVSISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISV 159
Cdd:MTH00216  82 VLSFTLALIVWGVIPYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISV 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 160 LLCVGSLSVTEIVLAQNNGIWFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHII 239
Cdd:MTH00216 162 LLCVGSLSITEIVLAQNNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHII 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 240 LMSCLTTIFFLGGWLSPISDFKGGAGWFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVLFGC 319
Cdd:MTH00216 242 LMSCLTTILFLGGWLSPIKYFKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGF 321


                 ....*.
gi 164565477 320 NGPPPI 325
Cdd:MTH00216 322 NGPPPI 327
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 21-316 2.05e-126

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 364.45  E-value: 2.05e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  21 AVAFLTLAERKILGYMQIRKGPNVVG-GGILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYEKGV 99
Cdd:COG1005   25 LAAYLTWAERKVLARMQDRIGPNRVGpFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFGPGL 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 100 SISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNNGI 179
Cdd:COG1005  105 VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAGGL 184

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 180 WFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGWLSPISD 259
Cdd:COG1005  185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPI 264

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 164565477 260 FKG----GAGWFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVL 316
Cdd:COG1005  265 LPLgglpGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVV 325
NADHdh pfam00146
NADH dehydrogenase;
21-313 8.96e-121

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 349.08  E-value: 8.96e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477   21 AVAFLTLAERKILGYMQIRKGPNVVG-GGILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYEKGV 99
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGpFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  100 SISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQnNGI 179
Cdd:pfam00146  92 VLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQ-AGG 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  180 WFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGWLSPISD 259
Cdd:pfam00146 171 WFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGPFPL 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 164565477  260 FkgGAGWFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVA 313
Cdd:pfam00146 251 P--GLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
24-316 8.92e-62

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 199.93  E-value: 8.92e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  24 FLTLAERKILGYMQIRKGPNVVGG-GILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPY------- 95
Cdd:NF040610  29 LAVWLERKLSADIQFRYGPNRVGPwGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVAIPFgaviing 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  96 -EKGVSISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLA 174
Cdd:NF040610 109 vEYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNIVEIVEA 188

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 175 QNnGIWFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGW- 253
Cdd:NF040610 189 QS-PIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLLFLGGWn 267

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 164565477 254 ------LSPISDFKGGAGWFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLS---LGMVIFVASVL 316
Cdd:NF040610 268 lpgfvtDIPVLGIILPTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSllnLGWAIALGLYL 339
 
Name Accession Description Interval E-value
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-325 1.40e-179

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 499.26  E-value: 1.40e-179
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477   1 MWFTFFYLIKSIIIIIPLLIAVAFLTLAERKILGYMQIRKGPNVVG-GGILQPFADGVKLFIKEMILPHQANKFVYLLAP 79
Cdd:MTH00216   2 MVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGvYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAP 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  80 VISFTLAFFVWGFLPYEKGVSISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISV 159
Cdd:MTH00216  82 VLSFTLALIVWGVIPYERGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISV 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 160 LLCVGSLSVTEIVLAQNNGIWFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHII 239
Cdd:MTH00216 162 LLCVGSLSITEIVLAQNNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHII 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 240 LMSCLTTIFFLGGWLSPISDFKGGAGWFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVLFGC 319
Cdd:MTH00216 242 LMSCLTTILFLGGWLSPIKYFKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGF 321


                 ....*.
gi 164565477 320 NGPPPI 325
Cdd:MTH00216 322 NGPPPI 327
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 21-325 3.61e-148

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 419.52  E-value: 3.61e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  21 AVAFLTLAERKILGYMQIRKGPNVVG-GGILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYEKGV 99
Cdd:MTH00054  18 SIAYLTLAERKVLGYIQCRKGPNVVGvYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYGEGV 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 100 SISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNNgI 179
Cdd:MTH00054  98 VLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKN-I 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 180 WFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGWLSP--I 257
Cdd:MTH00054 177 WFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLVIsgP 256

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 164565477 258 SDFKGGAGWFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVLFGCNGPPPI 325
Cdd:MTH00054 257 TSYFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPPF 324
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 21-316 2.05e-126

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 364.45  E-value: 2.05e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  21 AVAFLTLAERKILGYMQIRKGPNVVG-GGILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYEKGV 99
Cdd:COG1005   25 LAAYLTWAERKVLARMQDRIGPNRVGpFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFGPGL 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 100 SISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNNGI 179
Cdd:COG1005  105 VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAGGL 184

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 180 WFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGWLSPISD 259
Cdd:COG1005  185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPI 264

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 164565477 260 FKG----GAGWFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVL 316
Cdd:COG1005  265 LPLgglpGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVV 325
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 21-324 9.69e-124

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 358.56  E-value: 9.69e-124
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  21 AVAFLTLAERKILGYMQIRKGPNVVGG-GILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYEKGV 99
Cdd:MTH00029  23 SVAYLTLAERKVLGLMQNRKGPAIVGPwGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMDQGV 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 100 SISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNNgI 179
Cdd:MTH00029 103 FLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRS-V 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 180 WFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGWLSPISD 259
Cdd:MTH00029 182 WLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGWLSPLDG 261

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 260 F---------------KGGAGWFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVLFGCNGPPP 324
Cdd:MTH00029 262 IptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILIGFNGVPP 341
NADHdh pfam00146
NADH dehydrogenase;
21-313 8.96e-121

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 349.08  E-value: 8.96e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477   21 AVAFLTLAERKILGYMQIRKGPNVVG-GGILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYEKGV 99
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGpFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  100 SISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQnNGI 179
Cdd:pfam00146  92 VLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQ-AGG 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  180 WFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGWLSPISD 259
Cdd:pfam00146 171 WFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGPFPL 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 164565477  260 FkgGAGWFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVA 313
Cdd:pfam00146 251 P--GLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 21-324 3.33e-117

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 340.80  E-value: 3.33e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  21 AVAFLTLAERKILGYMQIRKGPNVVGG-GILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYekGV 99
Cdd:MTH00040  20 AVAFLTLVERKVLGYMQFRKGPNVVGPyGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPV--PT 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 100 SISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNNgI 179
Cdd:MTH00040  98 PTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNG-S 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 180 WFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGwLSPISD 259
Cdd:MTH00040 177 WLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGG-GSPFNE 255

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 164565477 260 -FKGGAGWFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVLFGCNGPPP 324
Cdd:MTH00040 256 iFPINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
22-315 2.88e-116

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 338.71  E-value: 2.88e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  22 VAFLTLAERKILGYMQIRKGPNVVG-GGILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYEKGVS 100
Cdd:PRK06076  27 VAFLIWFERKVLARMQLRYGPNRVGpFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFGPELV 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 101 ISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNNGiW 180
Cdd:PRK06076 107 IADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLS-W 185

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 181 FFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGWLSP--IS 258
Cdd:PRK06076 186 NIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGWLPPfpLG 265

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 164565477 259 DFKGGAGWFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASV 315
Cdd:PRK06076 266 GGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLLTAAV 322
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 21-324 4.27e-115

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 335.44  E-value: 4.27e-115
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  21 AVAFLTLAERKILGYMQIRKGPNVVGG-GILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYEkgV 99
Cdd:MTH00071  21 AVAFLTLVERKVLGYMQLRKGPNIVGPmGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMP--N 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 100 SISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNNgI 179
Cdd:MTH00071  99 NLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEF-M 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 180 WFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGWLSPISD 259
Cdd:MTH00071 178 WLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNHLQP 257

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 164565477 260 FKGGAGWFgFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVLFGCNGPPP 324
Cdd:MTH00071 258 ELSTMNLM-IKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPP 321
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 21-325 1.17e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 334.56  E-value: 1.17e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  21 AVAFLTLAERKILGYMQIRKGPNVVGG-GILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYEKgv 99
Cdd:MTH00111  21 AVAFLTLLERKILGYMQLRKGPNIVGPfGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPF-- 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 100 SISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNNgI 179
Cdd:MTH00111  99 PLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEP-L 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 180 WFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLG-GWLSPIS 258
Cdd:MTH00111 178 WLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNpSTLNLPP 257

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 164565477 259 DFkggagwFGFKVVFIIFFFIWV----RASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVLFGCNGPPPI 325
Cdd:MTH00111 258 EL------FTINLMTKTLLLTSGflwiRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQ 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 21-324 3.32e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 330.80  E-value: 3.32e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  21 AVAFLTLAERKILGYMQIRKGPNVVGG-GILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYEkgV 99
Cdd:MTH00134  22 AVAFLTLLERKVLGYMQLRKGPNIVGPyGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMP--Y 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 100 SISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNNgI 179
Cdd:MTH00134 100 PVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQES-I 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 180 WFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGWLSPISD 259
Cdd:MTH00134 179 WLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPTLP 258

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 164565477 260 FKGGAGWFgFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVLFGCNGPPP 324
Cdd:MTH00134 259 ELTTINLM-TKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPP 322
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 21-324 9.61e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 329.28  E-value: 9.61e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  21 AVAFLTLAERKILGYMQIRKGPNVVGG-GILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYEKgv 99
Cdd:MTH00104  16 AVAFLTLVERKVLGYMQLRKGPNIVGPyGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPLPMPY-- 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 100 SISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNNgI 179
Cdd:MTH00104  94 PLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEH-L 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 180 WFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGWLSPISD 259
Cdd:MTH00104 173 WLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAFHNPYMP 252

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 164565477 260 FKGGAGwFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVLFGCNGPPP 324
Cdd:MTH00104 253 ELYTTN-FTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPP 316
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 21-324 8.27e-109

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 319.16  E-value: 8.27e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  21 AVAFLTLAERKILGYMQIRKGPNVVG-GGILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYEKgv 99
Cdd:MTH00218  18 AVAFLTLLERKVLGYMQLRKGPNVVGpYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPF-- 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 100 SISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNnGI 179
Cdd:MTH00218  96 SLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQE-TI 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 180 WFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGWLSPISD 259
Cdd:MTH00218 175 WLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLTTINL 254

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 164565477 260 FKGGagwfgfkvVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVLFGCNGPPP 324
Cdd:MTH00218 255 MLKA--------TLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 21-316 1.52e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 313.35  E-value: 1.52e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  21 AVAFLTLAERKILGYMQIRKGPNVVG-GGILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYEkgV 99
Cdd:MTH00143  17 AVAFFTLLERKGLGYFQIRKGPNKVGlMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSY--F 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 100 SISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNNgI 179
Cdd:MTH00143  95 SSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFS-V 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 180 WFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGWlspISD 259
Cdd:MTH00143 174 WLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGS---SVL 250

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 164565477 260 FKGGAGWFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVL 316
Cdd:MTH00143 251 FLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 21-311 4.32e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 299.38  E-value: 4.32e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  21 AVAFLTLAERKILGYMQIRKGPNVVG-GGILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYEkgV 99
Cdd:MTH00193  18 SVAFLTLLERKVLGYIQIRKGPNKVGfMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYL--F 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 100 SISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNNgI 179
Cdd:MTH00193  96 NLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKY-I 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 180 WFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGWLSPISd 259
Cdd:MTH00193 175 WFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLL- 253

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 164565477 260 fkggagwFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIF 311
Cdd:MTH00193 254 -------FYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLF 298
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 21-317 4.94e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 294.25  E-value: 4.94e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  21 AVAFLTLAERKILGYMQIRKGPNVVG-GGILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYekGV 99
Cdd:MTH00225  17 SVAFYTLLERKVLGYIQLRKGPNKVGlMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPS--MF 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 100 SISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNNgI 179
Cdd:MTH00225  95 SIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQKY-F 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 180 WFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGWLSPISD 259
Cdd:MTH00225 174 WFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGFFVTIDL 253

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 164565477 260 FkggagwFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVLF 317
Cdd:MTH00225 254 F------LILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 21-321 3.25e-96

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 287.02  E-value: 3.25e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  21 AVAFLTLAERKILGYMQIRKGPNVVG-GGILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWgfLPYEKGV 99
Cdd:MTH00195  18 AVAFFTLLERKILGYIQLRKGPNKVGpYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILW--VPIPSPF 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 100 SISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNNgI 179
Cdd:MTH00195  96 GFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGF-S 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 180 WFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGWLSPISD 259
Cdd:MTH00195 175 WVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGGGTIIVA 254

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 164565477 260 FKGGagwfgfkvvFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVLFGCNG 321
Cdd:MTH00195 255 LKSL---------FLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 21-317 1.04e-82

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 252.78  E-value: 1.04e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  21 AVAFLTLAERKILGYMQIRKGPNVVG-GGILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYEKGV 99
Cdd:MTH00010  19 AMAFYTLLERKALGYFQLRKGPNKVGlAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHPS 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 100 SISDFkiSLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNNGI 179
Cdd:MTH00010  99 FFLKF--SILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQYSWI 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 180 WFFFPlfPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFlggwLSPISD 259
Cdd:MTH00010 177 LLMII--PLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFF----TSFIPS 250

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 164565477 260 FKGGAGWFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVLF 317
Cdd:MTH00010 251 IFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMF 308
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 21-317 5.32e-66

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 208.98  E-value: 5.32e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  21 AVAFLTLAERKILGYMQIRKGPNVVG-GGILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPYEkgV 99
Cdd:MTH00090  12 AIAFITLYERHLLGSSQNRLGPNKVSfMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYF--F 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 100 SISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSvteivLAQNNGI 179
Cdd:MTH00090  90 DFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFS-----FVSSFSL 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 180 WFFFPLFPvtimFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGgwlspISD 259
Cdd:MTH00090 165 SLFVIYLP----FLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK-----FSF 235

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 164565477 260 FkggagwfgfKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFVASVLF 317
Cdd:MTH00090 236 L---------MLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
24-316 8.92e-62

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 199.93  E-value: 8.92e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  24 FLTLAERKILGYMQIRKGPNVVGG-GILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFVWGFLPY------- 95
Cdd:NF040610  29 LAVWLERKLSADIQFRYGPNRVGPwGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVAIPFgaviing 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  96 -EKGVSISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLA 174
Cdd:NF040610 109 vEYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNIVEIVEA 188

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 175 QNnGIWFFFPLFPVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGW- 253
Cdd:NF040610 189 QS-PIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLLFLGGWn 267

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 164565477 254 ------LSPISDFKGGAGWFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLS---LGMVIFVASVL 316
Cdd:NF040610 268 lpgfvtDIPVLGIILPTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSllnLGWAIALGLYL 339
ndhA CHL00032
NADH dehydrogenase subunit 1
 29-314 1.07e-56

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 187.47  E-value: 1.07e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  29 ERKILGYMQIRKGPNVVGG-GILQPFADGVKLFIKEMILPHQANKFVYLLAP---VISFTLAFFVwgfLPYEKGVSISDF 104
Cdd:CHL00032  51 EREISAGIQQRIGPEYAGPlGILQALADGTKLLFKEDLLPSRGDIRLFSIGPsiaVISILLSYLV---IPFGYHLVLADL 127

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 105 KISL-LWIlAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNN-GIW-- 180
Cdd:CHL00032 128 SIGVfLWI-AISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKyGFWgw 206

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 181 --------FffplfpvtIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGG 252
Cdd:CHL00032 207 nlwrqpigF--------IVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGG 278

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 164565477 253 WLSPI-----SDFKGGAGWFGFKVVFIIFFFIWVRA------------SFPRIRYDQLMALLWKGYLPLSLGMVIFVAS 314
Cdd:CHL00032 279 WNLSIpyifiPELFEINKTGGVFGTTIGIFITLAKTylflfisittrwTLPRLRMDQLLNLGWKFLLPISLGNLLLTTS 357
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 22-312 1.70e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 166.64  E-value: 1.70e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  22 VAFLTLAERKILGYMQIRKGPNVVG-GGILQPFADGVKLFIKEMILPHQANKFVYLLAPVISFTLAFFvwGFLPYEKGVS 100
Cdd:MTH00058  18 VAFFILGERKILGYIQLRKGPNKVGiVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVF--YCFIYGSYYS 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 101 ISDFKISLLWILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAqNNGIW 180
Cdd:MTH00058  96 GSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYS-GWLSV 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 181 FFFPLfpVTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTIFFLGGwlspisdf 260
Cdd:MTH00058 175 LLFPL--IYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGG-------- 244

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 164565477 261 kggaGWFGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFV 312
Cdd:MTH00058 245 ----GFVSIMLLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVI 292
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
30-312 6.50e-33

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 123.37  E-value: 6.50e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477  30 RKILGYMQIRKGPnvvggGILQPFADGVKLFIKEMILPHQANkFVYLLAPVISFTLAFFVWGFLPYEKGVSISDFKISLL 109
Cdd:COG0650   26 RKVKARLQGRRGP-----PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVALAAMLLAALLVPVLTTGPPLSFSGDLI 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 110 WILAISSISVYAILMSGWGSKSKYAFLGAIRAAAQMISYEVSIGLILISVLLCVGSLSVTEIVLAQNNGIWFFFP--LFP 187
Cdd:COG0650  100 VLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAAHGPLLLSpsLLL 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164565477 188 VTIMFFASILAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEY-AHIILMSCLTTIFFLGGWLSPISdfkGGAGW 266
Cdd:COG0650  180 AAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAAlKLFVLLSLFVNLFLPWGIALTLL---LALLL 256

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 164565477 267 FGFKVVFIIFFFIWVRASFPRIRYDQLMALLWKGYLPLSLGMVIFV 312
Cdd:COG0650  257 FLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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