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Conserved domains on  [gi|187250401|ref|YP_001874822|]
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NADH dehydrogenase subunit 4L, partial (mitochondrion) [Mecistops cataphractus]

Protein Classification

ND4L family protein( domain architecture ID 10009575)

ND4L family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 2-97 1.66e-30

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177184  Cd Length: 98  Bit Score: 103.39  E-value: 1.66e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401  2 SPTDFLFALSFILFTIGFTFRHTHLLSALLCLEGMMLSAFMMLATWSMNSHTSSFVL-PLMILTLSACEAGIGLALLIAS 80
Cdd:MTH00125  2 TPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPmPIILLTFSACEAGTGLALLVAT 81

                        90
                ....*....|....*..
gi 187250401 81 ARTHNTANLKNLNLLQC 97
Cdd:MTH00125 82 TRTHGSDHLKNLNLLQC 98
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 2-97 1.66e-30

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 103.39  E-value: 1.66e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401  2 SPTDFLFALSFILFTIGFTFRHTHLLSALLCLEGMMLSAFMMLATWSMNSHTSSFVL-PLMILTLSACEAGIGLALLIAS 80
Cdd:MTH00125  2 TPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPmPIILLTFSACEAGTGLALLVAT 81

                        90
                ....*....|....*..
gi 187250401 81 ARTHNTANLKNLNLLQC 97
Cdd:MTH00125 82 TRTHGSDHLKNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
6-97 4.88e-14

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 61.81  E-value: 4.88e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401   6 FLFALSFILFTIGFT--FRHTHLLSALLCLEGMMLSAFMMLATWSMNSH-TSSFVLPLMILTLSACEAGIGLALLIASAR 82
Cdd:pfam00420  1 AYLLLSGLLFLIGLYglLLRRNLLRVLLSLELMLNAVNLALVLFGRLTAdPLPQALILTAIVIAAAEAAVGLALLVRIYR 80

                         90
                 ....*....|....*
gi 187250401  83 THNTANLKNLNLLQC 97
Cdd:pfam00420 81 THGTDDVDSLNLLKG 95
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 3-95 2.89e-10

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 51.99  E-value: 2.89e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401  3 PTDFLFALSFILFTIGFT--FRHTHLLSALLCLEGMMLSAFMMLAT-WSMNSHTSSFVLPLMILTLSACEAGIGLALLIA 79
Cdd:COG0713   2 PLEHYLILAAILFAIGLYgvLTRRNLIVVLMSIELMLNAVNLNLVAfSRYLGDLDGQVFALFVIAVAAAEVAVGLAIIVA 81

                        90
                ....*....|....*.
gi 187250401 80 SARTHNTANLKNLNLL 95
Cdd:COG0713  82 LYRNRGTIDVDDLNEL 97
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 2-97 1.66e-30

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 103.39  E-value: 1.66e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401  2 SPTDFLFALSFILFTIGFTFRHTHLLSALLCLEGMMLSAFMMLATWSMNSHTSSFVL-PLMILTLSACEAGIGLALLIAS 80
Cdd:MTH00125  2 TPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPmPIILLTFSACEAGTGLALLVAT 81

                        90
                ....*....|....*..
gi 187250401 81 ARTHNTANLKNLNLLQC 97
Cdd:MTH00125 82 TRTHGSDHLKNLNLLQC 98
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 2-97 8.84e-29

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 99.27  E-value: 8.84e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401  2 SPTDFLFALSFILFTIGFTFRHTHLLSALLCLEGMMLSAFMMLATWSMNSHTSSF-VLPLMILTLSACEAGIGLALLIAS 80
Cdd:MTH00126  2 TPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFsAAPMLLLAFSACEASAGLALLVAT 81

                        90
                ....*....|....*..
gi 187250401 81 ARTHNTANLKNLNLLQC 97
Cdd:MTH00126 82 ARTHGTDRLQNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 2-97 2.98e-27

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 95.44  E-value: 2.98e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401  2 SPTDFLFALSFILFTIGFTFRHTHLLSALLCLEGMMLSAFMMLATWSMN-SHTSSFVLPLMILTLSACEAGIGLALLIAS 80
Cdd:MTH00067  2 SPTYFTFYSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQfESLSYFSLPMFMLTFSACEASTGLALMVAT 81

                        90
                ....*....|....*..
gi 187250401 81 ARTHNTANLKNLNLLQC 97
Cdd:MTH00067 82 TRTHGTDHLKNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 10-97 4.61e-18

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 71.89  E-value: 4.61e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401 10 LSFILFTIGFTFRHTHLLSALLCLEGMMLSAFMMLATWSMNSH-TSSFVLPLMILTLSACEAGIGLALLIASARTHNTAN 88
Cdd:MTH00107 10 LAFTISLLGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHfTLASMMPIILLVFAACEAAVGLALLVMVSNTYGTDY 89


                ....*....
gi 187250401 89 LKNLNLLQC 97
Cdd:MTH00107 90 VQNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
6-97 4.88e-14

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 61.81  E-value: 4.88e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401   6 FLFALSFILFTIGFT--FRHTHLLSALLCLEGMMLSAFMMLATWSMNSH-TSSFVLPLMILTLSACEAGIGLALLIASAR 82
Cdd:pfam00420  1 AYLLLSGLLFLIGLYglLLRRNLLRVLLSLELMLNAVNLALVLFGRLTAdPLPQALILTAIVIAAAEAAVGLALLVRIYR 80

                         90
                 ....*....|....*
gi 187250401  83 THNTANLKNLNLLQC 97
Cdd:pfam00420 81 THGTDDVDSLNLLKG 95
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 6-96 2.40e-13

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 59.93  E-value: 2.40e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401  6 FLFALSFILFTIGFTFRHTHLLSALLCLEGMMLSAFMMLATWSMNSHTSSFV-LPLMILTLSACEAGIGLALLIASARTH 84
Cdd:MTH00043  6 IIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNLsFSLLLLTLSACEASIGLSLMVLLSRNH 85

                        90
                ....*....|..
gi 187250401 85 NTANLKNLNLLQ 96
Cdd:MTH00043 86 NSDLVASLNLLQ 97
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 6-95 9.97e-13

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 58.42  E-value: 9.97e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401  6 FLFALSFILFTIGFTFRHTHLLSALLCLEGMMLSAFMMLATWSMNSHTSSFV-LPLMILTLSACEAGIGLALLIASARTH 84
Cdd:MTH00181  3 FVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSMLmFGLILLTFSACEAVLGLSLLVATNRTH 82

                        90
                ....*....|.
gi 187250401 85 NTANLKNLNLL 95
Cdd:MTH00181 83 GSDHLLKFNLL 93
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 12-97 2.48e-10

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 52.28  E-value: 2.48e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401 12 FILFTIGFTFRHTHLLSALLCLEGMMLSAFMMLATWsMNSHTSSFVLPLMILTLSACEAGIGLALLIASARTHNTANLKN 91
Cdd:MTH00188 13 VVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVG-LSYMEKELYLSLVLLTFAACEASVGLALLVSLIRSHGSDYVSS 91


                ....*.
gi 187250401 92 LNLLQC 97
Cdd:MTH00188 92 LNLIKC 97
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 3-95 2.89e-10

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 51.99  E-value: 2.89e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401  3 PTDFLFALSFILFTIGFT--FRHTHLLSALLCLEGMMLSAFMMLAT-WSMNSHTSSFVLPLMILTLSACEAGIGLALLIA 79
Cdd:COG0713   2 PLEHYLILAAILFAIGLYgvLTRRNLIVVLMSIELMLNAVNLNLVAfSRYLGDLDGQVFALFVIAVAAAEVAVGLAIIVA 81

                        90
                ....*....|....*.
gi 187250401 80 SARTHNTANLKNLNLL 95
Cdd:COG0713  82 LYRNRGTIDVDDLNEL 97
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-84 4.99e-09

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 49.07  E-value: 4.99e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401  1 TSPTDFLFALSFILFTIGFTFRHTHLLSALLCLEGMMLSAFMMLATWSMNSHTSSFVLpLMILTLSACEAGIGLALLIAS 80
Cdd:MTH00149  2 MFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLF-LIILTFGACEASLGLSLLVSL 80


                ....
gi 187250401 81 ARTH 84
Cdd:MTH00149 81 IRLH 84
PRK05715 PRK05715
NADH-quinone oxidoreductase subunit NuoK;
2-95 9.76e-09

NADH-quinone oxidoreductase subunit NuoK;


Pssm-ID: 180218  Cd Length: 100  Bit Score: 48.25  E-value: 9.76e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401   2 SPTDFLFaLSFILFTIGFT--FRHTHLLSALLCLEGMMLSAFMMLATWS-MNSHTSSFVLPLMILTLSACEAGIGLALLI 78
Cdd:PRK05715   3 PLQHYLI-LAAILFCIGLVglLLRRNAIVVLMSIELMLNAVNLNFVAFSsYLGDLDGQVFAFFVITVAAAEAAIGLAILL 81

                         90
                 ....*....|....*..
gi 187250401  79 ASARTHNTANLKNLNLL 95
Cdd:PRK05715  82 QLYRNRGTIDVDDLNEL 98
ND4L MTH00180
NADH dehydrogenase subunit 4L; Provisional
 12-96 1.70e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177231  Cd Length: 99  Bit Score: 42.33  E-value: 1.70e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401 12 FILFTIGFTFRHTHLLSALLCLEGMMLS-AFMMLATWSMNSHTSSFVLPLMILTLSACEAGIGLALLIASARTHNTANLK 90
Cdd:MTH00180 13 FILGVLGIVLNRSNLIIMLMSIELMLLAiSLLFLINSVAIDNLIGQIFTIMILTVAAAESAIGLAILVAYYRIRGTIAVK 92


                ....*.
gi 187250401 91 NLNLLQ 96
Cdd:MTH00180 93 SLNLLR 98
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 6-84 3.62e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 41.29  E-value: 3.62e-06
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 187250401  6 FLFALSFILFTIGFTFRHTHLLSALLCLEGMMLSAFMMLATWSMNSHTSSFVLpLMILTLSACEAGIGLALLIASARTH 84
Cdd:MTH00162  5 LIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFL-LFFLTFSVCEGALGLSILVSMIRSH 82
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 6-97 7.07e-06

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 40.89  E-value: 7.07e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401  6 FLFALSFILFTIGFTFRHTHLLSALLCLEGMMLSAFMMLATWSMNSHTSSFVLPLMILTLSACEAGIGLALLIASARTHN 85
Cdd:MTH00013  6 FILSISPFISMFNLSLQRKHLLMSLLSLEAMILSLALFIPLSLMFANQVNGMLAIVLLTFGACEASLGLSLLVLMTRSYG 85

                        90
                ....*....|..
gi 187250401 86 TANLKNLNLLQC 97
Cdd:MTH00013 86 NDMLKSLTSNKC 97
ND4L MTH00001
NADH dehydrogenase subunit 4L; Provisional
 10-96 5.22e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177099  Cd Length: 99  Bit Score: 38.51  E-value: 5.22e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187250401 10 LSFILFTIGFTFRHTHLLSALLCLEGMMLSAFMM-LATWSMNSHTSSFVLPLMILTLSACEAGIGLALLIASARTHNTAN 88
Cdd:MTH00001 11 ILFLLGIWGIILNRGHFIIMLVSIELVLLSTFFLfLINSIEIDLLIEQIFTIMGLTIAAAESAIGLAIMVAYYRIRGTIS 90


                ....*...
gi 187250401 89 LKNLNLLQ 96
Cdd:MTH00001 91 LKSLNSLR 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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