|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
2-739 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1112.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 2 KLIYQYARTAPPFPLVSSTLTGLGLFIFPVATNNCRRLYASISTSPSSIAMSIPLHTSWRQLAGDPIHRYPRSWIYNESV 81
Cdd:CHL00025 2 EHTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINNDF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 82 ASETGYSIDPPTPTTPVLITTAGVMVMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPS 161
Cdd:CHL00025 82 SLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 162 IGPRFTRARAAHACQKASITNRVGDFGSLLGVSGFPRATGSFEFESSSVRLEELLTDRGVSLFPATPCATPLFLGSVAKP 241
Cdd:CHL00025 162 IGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 242 AQFPLHVRSPDAMEGPTPIPALIHAATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAY 321
Cdd:CHL00025 242 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAY 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 322 STMSQPGYMVLAPGVASYRAAIFHLITHAHSKAPSSSGSGSVIHSVEPVTGYCPDRSQNTAFMGGLRTCMPITGTAFLSG 401
Cdd:CHL00025 322 STMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLG 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 402 TPPPRGIPPFARFRSKDEIPNDGWLSRPILGWMAWCTAGPTGSHMLRTYLPTFEGYYRANAFGPPRP------PASVWED 475
Cdd:CHL00025 402 TLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKknssfySISLWGK 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 476 RRYRASGRgagfaAGLLPTGCSDTTAAKLPVDRSggTRSGDSRRGWGSTVTHYSAVEHYKPllcPKESDDAMLFPLVVPT 555
Cdd:CHL00025 482 EESKKINK-----LLLLLTMNNNERVSFFSKKTY--KIDGNVRNMIRSFITIFGNKKTFSY---PHESDNTMLFPLLVLV 551
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 556 IPTFPVGSIGVQspiglgtgFIDPQPDcwLDLLLNYPR---GIIQQ------DWSELLPDATTSVATALSGILVASILHG 626
Cdd:CHL00025 552 LFTLFVGFIGIP--------FNQEGID--LDILSKWLTpsiNLLHQnsnnsvDWYEFLTNAIFSVSIAFFGIFIASFLYG 621
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 627 RR--PILQPPRIDPELEG-----ISGYFPSYLYDWSYYRGYVDRYYNIVPVASVRILAKKAPTPDDWVIDGIVNGVGISG 699
Cdd:CHL00025 622 PVysSLQNLDLINSFVKGgpkriFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITS 701
|
730 740 750 760
....*....|....*....|....*....|....*....|
gi 255961341 700 TFGGEALRYAGGGRISHHSPGPILGTPIPLTIVTTGYEHD 739
Cdd:CHL00025 702 FFVGEGIKYVGGGRISSYLFLYLFYVSIFLLILYFFFSFI 741
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
4-713 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 548.86 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 4 IYQYARTAPPFPLVSSTLTGLGLFIFPVATNNCRRLYASISTSPSSIAMSIPLHTSWRQLAGDPIHRYPRSWIYNESVAS 83
Cdd:PRK07376 4 AYQYAWLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGDFHL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 84 ETGYSIDPPTPTTPVLITTAGVMVMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIG 163
Cdd:PRK07376 84 PMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVG 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 164 PRFTRARAAHACQKASITNRVGDFGSLLGVSGFPRATGSFEFESSSVRLEELLTDRGVSLFPATPCATPLFLGSVAKPAQ 243
Cdd:PRK07376 164 FWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQ 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 244 FPLHVRSPDAMEGPTPIPALIHAATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYST 323
Cdd:PRK07376 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYST 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 324 MSQPGYMVLAPGVASYRAAIFHLITHAHSKAPSSSGSGSVIHSVEPVTGYCPDRSQNTAFMGGLRTCMPITGTAFLSGTP 403
Cdd:PRK07376 324 ISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCL 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 404 PPRGIPPFARFRSKDEIPNDGWLSRPILGWMAWCTAGPTGSHMLRTYLPTFEGYYRANafgpprppasvwedrryrasgr 483
Cdd:PRK07376 404 AISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEGEFRGN---------------------- 461
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 484 gagfaagllptgcsdTTAAKLPVDRSGGTRSGDSRRGWGSTVTHYSAVEhykpllcPKESDDAMLFPLVVPTIPTFPVGS 563
Cdd:PRK07376 462 ---------------DKELQKELLAAADAPGHHEGHHEEHGEHHHHSGS-------PHESPWTMTLPLVVLAVPSVLIGL 519
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 564 IGVqspiglgtgfidPQPDCWLDLLLNyPRGIIQQ----DWSELLPDATTSVATALSGILVASILHGRRpilqppRIDPE 639
Cdd:PRK07376 520 LGT------------PWNNRFEAFLHA-PGEALEAaahfEWGEFLILAGASVGIALIGITLASLMYLLK------KIDPA 580
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 255961341 640 LegISGYFPSyLYDWSYYRGYVDRYYNIVPVASVRILAKKAPTPDDWVIDGIVNGVGISGTFGGEALRYAGGGR 713
Cdd:PRK07376 581 A--IAERFPP-LYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLVTLGSGEGLKYFENGR 651
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
14-717 |
1.61e-112 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 353.30 E-value: 1.61e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 14 FPLVSSTLTGLGLFIFPvatnncRRLYASISTSPSSIAMsipLHTSW--RQLAGDPIHRYPRSWIYNESVASETGYSIDP 91
Cdd:COG1009 10 LPLLGALLAGLLGRRLG------RRAAGWLAALAPLAAF---VLSLLlfPAVLGGEVVVELYTWIPVGSLGLDFGFRLDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 92 PTPTTPVLITTAGVMVMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARA 171
Cdd:COG1009 81 LSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 172 AHACQKASITNRVGDFGSLLGVSGFPRATGSFEFessSVRLEELLTDRGVSLfpATPCATPLFLGSVAKPAQFPLHVRSP 251
Cdd:COG1009 161 RRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNF---SELLAAAPTILSSPL--LTLILLLLLLGAFGKSAQFPLHFWLP 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 252 DAMEGPTPIPALIHAATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMV 331
Cdd:COG1009 236 DAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMF 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 332 LAPGVASYRAAIFHLITHAHSKAPSSSGSGSVIHSVEpvtgycpdrSQNTAFMGGLRTCMPITGTAFLSGTPPPRGIPPF 411
Cdd:COG1009 316 LALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPF 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 412 ARFRSKDEIPNDGWLS---RPILGWMAWCTAGPTGSHMLRTYLPTFegyyranaFGPPRPPASvwedrryrasgrgagfa 488
Cdd:COG1009 387 AGFFSKEAILEAALEAgglGPLLLAVALLGAFLTAFYSFRLFFLVF--------FGKPRPKTP----------------- 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 489 agllptgcsdttaaklpvdrsggtrsgdsrrgwgstvthysavEHykpllcPKESDDAMLFPLVVPTIPTFPvgsIGVQS 568
Cdd:COG1009 442 -------------------------------------------KH------PHESPWLMTLPLVVLAVLSLV---LGLLL 469
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 569 PIGLGtGFIDPQPDCWLDLLLNYPRGIiqqdwsellpdATTSVATALSGILVASILHGRRPILQPPRidpelegisgyFP 648
Cdd:COG1009 470 PGLLE-GLLAPAAVLGGELHLAHGLLL-----------NALPLLLSLLGIALGYLLYLKRPLPALAE-----------RL 526
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 255961341 649 SYLYDWSYYRGYVDRYYNIVPVASVRILAKKAPTpDDWVIDGIVNGVGISGTFGGEALRYAGGGRISHH 717
Cdd:COG1009 527 KPLYRLLANKWYFDELYDALFVKPVRALARFLWF-DRYVIDGIVNGLARLTLFSGRLLRRLQTGYLQFY 594
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
14-716 |
4.61e-108 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 342.14 E-value: 4.61e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 14 FPLVSSTLTGLGLFIFPvatnncRRLYASISTSPS--SIAMSIPLHTSWRQLAGDPIHRYPRSWIYNESVASETGYSIDP 91
Cdd:PRK06590 11 LPLIGALILGLFGRRIG------EKWAHLVGTGLVglSALLSLVVFFDFLLGGGRAFSQTLWTWISVGDFDVDFGLRVDG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 92 PTPTTPVLITTAGVMVMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARA 171
Cdd:PRK06590 85 LSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 172 AHACQKASITNRVGDFGSLLGVSGFPRATGSFEFESSSVRLEELLTDRGVSLFPATPCatpLFLGSVAKPAQFPLHVRSP 251
Cdd:PRK06590 165 GAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAAPQFFGLGWSALTLICLL---LFIGAMGKSAQFPLHTWLP 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 252 DAMEGPTPIPALIHAATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMV 331
Cdd:PRK06590 242 DAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMF 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 332 LAPGVASYRAAIFHLITHAHSKAPSSSGSGSVIHSVepvtgycpDRSQNTAFMGGLRTCMPITGTAFLSGTPPPRGIPPF 411
Cdd:PRK06590 322 LALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPF 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 412 ARFRSKDEIP----NDGWLsrpILGWMAWCTAGPTGSHMLRTYLPTFegyyranaFGPPRPPAsvwedrryrasgrgagf 487
Cdd:PRK06590 394 AGFFSKDEILeaafANGHI---NLFVAGLVGAFLTAFYSFRLIFLVF--------HGKEKEKI----------------- 445
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 488 aagllptgcsdttaaklpvdrsggtrsgdsrrgwgstvthysavEHykpllcPKESDDAMLFPLVVptiptFPVGSIGVq 567
Cdd:PRK06590 446 --------------------------------------------HH------PHESPAVMTLPLIV-----LAVLSVFA- 469
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 568 spiglgtGFIDPQPdcWLDLLLNYPRGIIQQDWSEL-LPDATTSVATALSGILVASILHGRRPILqPPRIDPELegisgy 646
Cdd:PRK06590 470 -------GALIVPP--FLGVLPLTTELAHGEAEHHLpVWVALLPLVVALAGIALAWLLYLKKPTL-PTSIAAPG------ 533
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 255961341 647 fpSYLYDWSYYRGYVDRYYNIVPVASVRILAKKAP-TPDDWVIDGIVNGVGISGTFGGEALRYAGGGRISH 716
Cdd:PRK06590 534 --RFLYTLLRNKYYFDELYEKVFVKPGLALARLLWkDGDDGIIDGLVPNSARLVGGGSRVLRRLQTGYLRH 602
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
14-716 |
2.64e-98 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 316.15 E-value: 2.64e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 14 FPLVSSTLTGL-GLFIFPVATNNCRRLYASISTSPSSIAMSIPLHTSWRQlagdPIHRYPRSWIYNESVASETGYSIDPP 92
Cdd:TIGR01974 9 LPLIGFLIAGLfGRRIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEGE----AFTQSLFPWISVGGFQVDFGLRLDGL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 93 TPTTPVLITTAGVMVMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAA 172
Cdd:TIGR01974 85 SLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSAN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 173 HACQKASITNRVGDFGSLLGVSGFPRATGSFEFEsssvrleELLTDRGVSLFPATPCATP-LFLGSVAKPAQFPLHVRSP 251
Cdd:TIGR01974 165 NAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQ-------EVFALAPGAFFSALTLICLlLFIGAMGKSAQLPLHTWLP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 252 DAMEGPTPIPALIHAATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMV 331
Cdd:TIGR01974 238 DAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMF 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 332 LAPGVASYRAAIFHLITHAHSKAPSSSGSGSVIHSVEpvtgycpdRSQNTAFMGGLRTCMPITGTAFLSGTPPPRGIPPF 411
Cdd:TIGR01974 318 LALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGF 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 412 ARFRSKDEIPNDGWLS--RPILGWMAWCTAGPTGSHMLRTYLPTFegyyranaFGPPRppasvwedrryrasgrgagfaa 489
Cdd:TIGR01974 390 AGFFSKDLILEAAFASgtHSFLFVAGLIGAFLTAFYSFRLIFMVF--------HGKER---------------------- 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 490 gllptgcsdttaaklpvdrsggtrsgdsrrgwgstvthysaVEHYKPllcPKESDDAMLFPLVVPTIPTFPVGSIGVqsp 569
Cdd:TIGR01974 440 -----------------------------------------HEADAH---PHESPLVMLLPLIVLAVGSVFAGFFIV--- 472
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 570 iglgtgfidPQPDCWLDLLLNYPrGIIQQDWSELLPDATTSVATALSGILVASILHgrrpiLQPPRIDPELEGISGYFPS 649
Cdd:TIGR01974 473 ---------PLFEFLKGVLPTSA-EPALEHHHVPALEIWSPTAVAILGILLAYLLY-----LGNPTLPAKIAQRHSGLYR 537
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 255961341 650 YLY-DWsyyrgYVDRYYNIVPVASVRILAKK-APTPDDWVIDGIVNGVGISGTFGGEALRYAGGGRISH 716
Cdd:TIGR01974 538 LLLnKW-----YFDELYDKVFVKPYLFLGKLlWKDPDDKIIDGFGPGIARLVGAISKRLRKSQTGYLRW 601
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
86-420 |
6.84e-70 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 240.36 E-value: 6.84e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 86 GYSIDPPTPTTPVLITTAGVMVMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPR 165
Cdd:MTH00020 75 GLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 166 FTRARAAHACQKASITNRVGDFGSLLGVSGFPRATGSFEFESssvrleellTDRGVSLFPATPCATP---LFLGSVAKPA 242
Cdd:MTH00020 155 LTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSS---------VFNMVVSAPSSDITLIclfLFIGAVGKSA 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 243 QFPLHVRSPDAMEGPTPIPALIHAATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYS 322
Cdd:MTH00020 226 QLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 323 TMSQPGYMVLAPGVASYRAAIFHLITHAHSKAPSSSGSGSVIHSVepvtgycpDRSQNTAFMGGLRTCMPITGTAFLSGT 402
Cdd:MTH00020 306 TCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGS 377
|
330
....*....|....*...
gi 255961341 403 PPPRGIPPFARFRSKDEI 420
Cdd:MTH00020 378 LSLMGFPYLTGFYSKDLI 395
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
14-420 |
2.70e-68 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 236.44 E-value: 2.70e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 14 FPLVSSTLTGLglFIFPVATNNCRRLYASISTSPSSIAMSIPLHTSwrqLAGDPIHRYPRSWIYNESVASETGYSIDPPT 93
Cdd:MTH00210 8 LPLLSAIISGL--FGRKIGTKGAGILTSSCIVISAIVSCCIFYETT---LNGSATYIKLWRWFDSELLTTYFGLQFDSLT 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 94 PTTPVLITTAGVMVMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAH 173
Cdd:MTH00210 83 STMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 174 ACQKASITNRVGDFGSLLGVSGFPRATGSFEFESSSVRLEELLTDRGVSLFpatpCATpLFLGSVAKPAQFPLHVRSPDA 253
Cdd:MTH00210 163 AAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESLTII----CLL-LFIGAVGKSAQLGLHTWLPDA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 254 MEGPTPIPALIHAATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLA 333
Cdd:MTH00210 238 MEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMV 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 334 PGVASYRAAIFHLITHAHSKAPSSSGSGSVIHSVepvtgycpDRSQNTAFMGGLRTCMPITGTAFLSGTPPPRGIPPFAR 413
Cdd:MTH00210 318 CGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTG 389
|
....*..
gi 255961341 414 FRSKDEI 420
Cdd:MTH00210 390 FYSKDLI 396
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
36-420 |
7.10e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 211.36 E-value: 7.10e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 36 CRRLYASISTSP-SSIAMS----IPLHTSWRQLAGDPI-HRYPRSWIYNESVASETGYSIDPPTPTTPVLITTAGVMVMI 109
Cdd:MTH00032 19 FGRLIGTIGSGIlSTICMGsstlIALFLAYEVLINDAVvHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 110 YSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAHACQKASITNRVGDFGS 189
Cdd:MTH00032 99 YSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGV 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 190 LLGVSGFPRATGSFEFESSSV-RLEELLTDRGVS--------LFPATPCATPLFLGSVAKPAQFPLHVRSPDAMEGPTPI 260
Cdd:MTH00032 179 ILGMVLIYKTIGSLDFLTFNGgSVGSGIMDRGYYgggayespLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPV 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 261 PALIHAATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGV-ASY 339
Cdd:MTH00032 259 SALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSH 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 340 RAAIFHLITHAHSKAPSSSGSGSVIHSVEPvtgycpdRSQNTAFMGGLRTCMPITGTAFLSGTPPPRGIPPFARFRSKDE 419
Cdd:MTH00032 339 NVGLFHLVNHAFFKALLFLSAGSVIHSTTV-------DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDL 411
|
.
gi 255961341 420 I 420
Cdd:MTH00032 412 I 412
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
141-440 |
2.46e-51 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 180.59 E-value: 2.46e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 141 SPNPMQIHVFRESVGMCPYPSIGPRFTRARAAHACQKASITNRVGDFGSLLGVSGFPRATGSFEFESSSVRLEELLTDRG 220
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 221 VSLfpatpCATPLFLGSVAKPAQFPLHVRSPDA-MEGPTPIPALIhAATMVAAGIYPVARMFPPSE-APPSMMSSISWVG 298
Cdd:pfam00361 81 LLL-----LFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLpSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 299 GLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVA---SYRAAIFHLITHAHSKAPSSSGSGSVIHSVEpvtgycp 375
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 255961341 376 dRSQNTAFMGGLRTCMPITGTAFLSGTPPPRGIPPFARFRSKDEIPNDGWLSRPILGWMAWCTAG 440
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
106-420 |
3.40e-48 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 179.76 E-value: 3.40e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 106 MVMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAHACQKASITNRVG 185
Cdd:MTH00211 94 SILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 186 DFGSLLGVsgfpratGSFEFESSSVRLEELLTDRGVSLFPATPcatpLFLGSVAKPAQFPLHVRSPDAMEGPTPIPALIH 265
Cdd:MTH00211 174 DIGLLLSM-------VWLLLNLNSWEISQLFILNLDLTLFLLG----LLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLH 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 266 AATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVASYRAAIFH 345
Cdd:MTH00211 243 SSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLH 322
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 255961341 346 LITHAHSKAPSSSGSGSVIHSVepvtgycpDRSQNTAFMGGLRTCMPITGTAFLSGTPPPRGIPPFARFRSKDEI 420
Cdd:MTH00211 323 ICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLI 389
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
107-420 |
3.03e-44 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 169.00 E-value: 3.03e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 107 VMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAHACQKASITNRVGD 186
Cdd:MTH00208 123 IIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGD 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 187 FGSLLGVSGfpratGSFEFESSSvrLEELLTDRGVSLFPATPCATPLFLGSVAKPAQFPLHVRSPDAMEGPTPIPALIHA 266
Cdd:MTH00208 203 IGIILFLSL-----SLINFNSWN--LNEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHS 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 267 ATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVASYRAAIFHL 346
Cdd:MTH00208 276 STMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHI 355
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 255961341 347 ITHAHSKAPSSSGSGSVIHSVepvtgycpDRSQNTAFMGGLRTCMPITGTAFLSGTPPPRGIPPFARFRSKDEI 420
Cdd:MTH00208 356 CTHAFFKAMLFLCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLI 421
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
99-418 |
4.18e-43 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 167.33 E-value: 4.18e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 99 LITTAGVMVMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAHACQKA 178
Cdd:TIGR00940 83 LITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKS 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 179 SITNRVGDFGSLLGVSGFPRATGSFEFESSSVRLEELltdRGVSLFpaTPCATPLFLGSVAKPAQFPLHVRSPDAMEGPT 258
Cdd:TIGR00940 163 LTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAI---RNSPLF--GTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPT 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 259 PIPALIHAATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYM--VLAPGV 336
Cdd:TIGR00940 238 PVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLImvLLGLGS 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 337 ASYR--------------AAIFHLITHAHSKAPSSSGSGSVIHSvepvTGycpdrSQNTAFMGGLRTCMPITGTAFLSGT 402
Cdd:TIGR00940 318 PSYHyqgddskiyalaavAAVFHLINHATFKGSLFMAAGIIDHE----TG-----TRDIRKLGGLFHIMPITFTLAMIAS 388
|
330
....*....|....*.
gi 255961341 403 PPPRGIPPFARFRSKD 418
Cdd:TIGR00940 389 AAMAGVPPFNGFLSKE 404
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
99-420 |
4.51e-40 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 158.16 E-value: 4.51e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 99 LITTAGVMVMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAHACQKA 178
Cdd:PRK12647 72 LITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQA 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 179 SITNRVGDFGSLLGVSGFPRATGSFEFeSSSVRLEELLtdRGVSLFPAtpcATPLFL-GSVAKPAQFPLHVRSPDAMEGP 257
Cdd:PRK12647 152 LLVTGGGGLALLAGLILLGNVTGTYSL-SELLASGDVI--REHPLYLA---ILLLVLgGAFTKSAQFPFHFWLPNAMEAP 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 258 TPIPALIHAATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVA 337
Cdd:PRK12647 226 TPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLG 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 338 S---YRAAIFHLITHAHSKAPSSSGSGSVIHSvepvTGycpdrSQNTAFMGGLRTCMPITGTAFLSGTPPPRGIPPFARF 414
Cdd:PRK12647 306 SelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG-----TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGF 376
|
....*.
gi 255961341 415 RSKDEI 420
Cdd:PRK12647 377 LAKELI 382
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
110-420 |
1.54e-39 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 154.68 E-value: 1.54e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 110 YSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAHACQKASITNRVGDFGS 189
Cdd:MTH00066 101 FAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGL 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 190 LLGVSGFPRATGSFEFESssvrleelltdrgvsLFPATPCATPLFLG----SVAKPAQFPLHVRSPDAMEGPTPIPALIH 265
Cdd:MTH00066 181 ILSMAWLAMNTNSWELQQ---------------IFLLNDNSTLPLLGlilaAAGKSAQFGLHPWLPAAMEGPTPVSALLH 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 266 AATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVASYRAAIFH 345
Cdd:MTH00066 246 SSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFH 325
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 255961341 346 LITHAHSKAPSSSGSGSVIHSVepvtgycpDRSQNTAFMGGLRTCMPITGTAFLSGTPPPRGIPPFARFRSKDEI 420
Cdd:MTH00066 326 ICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAI 392
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
99-417 |
1.36e-38 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 153.54 E-value: 1.36e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 99 LITTAGVMVMIYSDSHMPHDQGYL-RFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAHACQK 177
Cdd:PRK12645 86 LITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQK 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 178 ASITNRVGDFGSLLGVSGFPRATGSFefessSVRleELLTdrGVSLFPATPCATP----LFLGSVAKPAQFPLHVRSPDA 253
Cdd:PRK12645 166 SMLITVFGGLSMLGGFILLYIMTGSF-----SIR--EMIA--NADEIQNSPLFIPamilILLGAFTKSAQFPFYIWLPDA 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 254 MEGPTPIPALIHAATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMV-- 331
Cdd:PRK12645 237 MEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMsl 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 332 LAPGVASYR--------------AAIFHLITHAHSKapsssGS-----GSVIHSvepvTGycpdrSQNTAFMGGLRTCMP 392
Cdd:PRK12645 317 LGIGAASLHyqgddskiyaaaitAAIFHLINHATFK-----GSlfmivGIVDHE----TG-----TRDIRKLGGLMTIMP 382
|
330 340
....*....|....*....|....*
gi 255961341 393 ITGTAFLSGTPPPRGIPPFARFRSK 417
Cdd:PRK12645 383 ITFTIALIGALSMAGLPPFNGFLSK 407
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
86-434 |
1.64e-36 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 143.58 E-value: 1.64e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 86 GYSIDPPTPTTPVLITTAGVMVMIYSDSHM-------PHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCP 158
Cdd:PRK06525 70 GLVIDPVSVLIGFVVVLLGLLVTLYSTGYMspgnrehPVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCS 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 159 YPSIGpRFTRARAAHACQKASITNRVGDFGSLLGVSGFPRATGSFEFESssvrLEELLTDRGVSLFPAtpcatpLFLGSV 238
Cdd:PRK06525 150 WALIS-YYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSA----LSGLHGSLKYLVFLG------ILFAAW 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 239 AKPAQFPLHVRSPDAMEGPTPIPALIHAATMVAAGIYPVARMFPPSEAPPsmmSSISWVGGLTALLGATIA----PAQRD 314
Cdd:PRK06525 219 GKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIP---HVIGYVGAVMAIVTLLYGflmyLPQQD 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 315 LKRVLAYSTMSQPGYMVLAPGVASY------RAAIFHLITHAHSKAPSSSGSGSVIHSvepvTGycpdrsqnTAFMG--- 385
Cdd:PRK06525 296 MKRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYS----CG--------TRLLPrlr 363
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 255961341 386 GLRTCMPITGTAFLSGTPPPRGIPPFARFRSKDEIPNDGWLSRPILGWM 434
Cdd:PRK06525 364 GVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
104-418 |
2.71e-35 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 143.43 E-value: 2.71e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 104 GVMVMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAHACQKASITNR 183
Cdd:PRK12649 93 GVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITA 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 184 VGDFGSLLGVSGFPRATGSFEFESSSVRLEELLTDRGVSLFPATpcATPLFLGSVAKPAQFPLHVRSPDAMEGPTPIPAL 263
Cdd:PRK12649 173 GGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLIT--LILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAF 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 264 IHAATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVASYR--- 340
Cdd:PRK12649 251 LHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYHepg 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 341 ----AAIFHLITHAHSKAPSSSGSGSVIHSVEpvtgycpdrSQNTAFMGGLRTCMPITGTAFLSGTPPPRGIPPFARFRS 416
Cdd:PRK12649 331 lgvaAATFHLLNHATFKACLFLVAGIVAHEAA---------TRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLS 401
|
..
gi 255961341 417 KD 418
Cdd:PRK12649 402 KE 403
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
107-420 |
7.92e-35 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 140.68 E-value: 7.92e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 107 VMIYSDSHMPHDQGYLRFFAYLGLpnaF---MLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAHACQKASITNR 183
Cdd:MTH00004 100 ILEFSTWYMASDPHITKFFKYLLI---FliaMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNR 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 184 VGDFGSLLGVSGFPRATGSFEfesssvrLEELLTDRGVSLFPATPcatpLFLGSVAKPAQFPLHVRSPDAMEGPTPIPAL 263
Cdd:MTH00004 177 IGDIGLILSMAWLAMTLNTWE-------IQQLFSPTQTPTLPLLG----LILAATGKSAQFGLHPWLPAAMEGPTPVSAL 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 264 IHAATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVASYRAAI 343
Cdd:MTH00004 246 LHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAF 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 344 FHLITHAHSKAPSSSGSGSVIHSVepvtgycpDRSQNTAFMGGLRTCMPIT------------GTAFLSGtppprgippf 411
Cdd:MTH00004 326 LHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPITsscltignlalmGTPFLSG---------- 387
|
....*....
gi 255961341 412 arFRSKDEI 420
Cdd:MTH00004 388 --FYSKDTI 394
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
123-420 |
2.20e-34 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 139.22 E-value: 2.20e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 123 RFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAHACQKASITNRVGDFGSLLGVSGFPRATGS 202
Cdd:MTH00108 116 RFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNS 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 203 FEFEsssvrlEELLTDRGVSLFPATPcatpLFLGSVAKPAQFPLHVRSPDAMEGPTPIPALIHAATMVAAGIYPVARMFP 282
Cdd:MTH00108 196 WDLQ------QIFMLNPNNSNLPLMG----LLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHP 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 283 PSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVASYRAAIFHLITHAHSKAPSSSGSGS 362
Cdd:MTH00108 266 LMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGS 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 255961341 363 VIHSVepvtgycpDRSQNTAFMGGLRTCMPITGTAFLSGTPPPRGIPPFARFRSKDEI 420
Cdd:MTH00108 346 IIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLI 395
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
123-420 |
2.73e-34 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 139.20 E-value: 2.73e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 123 RFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAHACQKASITNRVGDFGSLLGVSGFPRATGS 202
Cdd:MTH00137 120 RFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWMATNLNS 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 203 FE----FESSSVrleelltdrgvslFPATPCATPLFLGSVAKPAQFPLHVRSPDAMEGPTPIPALIHAATMVAAGIYPVA 278
Cdd:MTH00137 200 WEiqqiFALSKD-------------FDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLI 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 279 RMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVASYRAAIFHLITHAHSKAPSSS 358
Cdd:MTH00137 267 RLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFL 346
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 255961341 359 GSGSVIHSVepvtgycpDRSQNTAFMGGLRTCMPITGTAF------LSGTppprgipPF-ARFRSKDEI 420
Cdd:MTH00137 347 CSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSSCLtigslaLTGT-------PFlAGFFSKDAI 400
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
88-713 |
3.24e-34 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 138.89 E-value: 3.24e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 88 SIDPPTPTTPVLITTAGVMVMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFT 167
Cdd:PRK07390 86 EISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYA 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 168 RARAAHACQKASITNRVGDFGSLLGVSGFPRATGSFEFESssvrLEELLTDRGVSLFPATPCATPLFLGSVAKPAQFPLH 247
Cdd:PRK07390 166 QPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSD----LAAWAATANLDPLTATLLGLALIAGPTGKCAQFPLH 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 248 VRSPDAMEGPtpIPALI-HAATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQ 326
Cdd:PRK07390 242 LWLDEAMEGP--NPASIlRNSVVVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAY 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 327 PGYMVLAPGVASYRAAIFHLITHAHSKAPSSSGSGSVIHSVEpvtgycpdrSQNTAFMGGLRTCMPITGTAFLSGTPPPR 406
Cdd:PRK07390 320 LGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTTI---------TQDLTELGGLWSRMPATTLAFLVGSAGLV 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 407 GIPPFARFRSKDEIPNDGWLSRPILgwmawctagptgshmlrtyLPTFEGYYRANAFGPPRPPASVWedrryrasgrgag 486
Cdd:PRK07390 391 ALLPLGGFWALLRLADGLWAVSPWL-------------------VGVLLLVNALTAFNLTRVFRLVF------------- 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 487 faagllptgcsdttaaklpvdrsGGTRSGDSRR----GWgstvthysavehykpllcpkesddAMLFPLVVPTIPTfpvg 562
Cdd:PRK07390 439 -----------------------LGKPQQKTRRspevLW------------------------PMALPMVILAGFT---- 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 563 sigVQSPIGLGTgfidpqpdcwLDLLLnyprgiiqqDWSELLPDATTS-VATALSGILVASILHGRRPILQPPRIdpele 641
Cdd:PRK07390 468 ---LHLPLLLQQ----------WGLLP---------SWEALNLWAAPLlVASGLLGVLLGAWIYLNKAWSRPIQL----- 520
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 255961341 642 gisgyFPSYLYDWSYYRGYVDRYYNIVPVASVRILAKKAPTPDDWVIDGIVNGVGISGTFGGEALRYAGGGR 713
Cdd:PRK07390 521 -----PLRFLQDLLAYDFYTDRLYRLTIVFVVALISRLTAWFDRYVVDGLVNLVGLATLFSGQGLKYSVSGQ 587
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
98-417 |
1.62e-31 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 127.96 E-value: 1.62e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 98 VLITTAGVMVMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAahacqK 177
Cdd:COG0651 83 LLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEAL-----R 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 178 ASIT----NRVGDFGSLLGVSGFPRATGSFEFESSSVRLEELltdrgvSLFPATPCATPLFLGSVAKPAQFPLHVRSPDA 253
Cdd:COG0651 158 AGLKylilNLVGSALFLLGVGLLYGATGTLNMADLAARLAEL------DPGLLLAAFALLLVGFGIKAALFPLHFWLPDA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 254 M-EGPTPIPALIHAAtMVAAGIYPVARMF---PPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGY 329
Cdd:COG0651 232 YpAAPSPVSALLSGL-LTKVGVYAILRVLtllFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 330 MVLAPGVASYR---AAIFHLITHAHSKAPSSSGSGSVIHSvepvTGycpdrSQNTAFMGGLRTCMPITGTAFLSGTPPPR 406
Cdd:COG0651 311 ILLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERA----TG-----TRDLDKLGGLGKRMPLTAAAFLIGALALA 381
|
330
....*....|.
gi 255961341 407 GIPPFARFRSK 417
Cdd:COG0651 382 GLPPLSGFVSK 392
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
98-418 |
7.37e-31 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 129.49 E-value: 7.37e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 98 VLITTAGVMVMIYSDSHMPHDQGYL-RFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAH-AC 175
Cdd:PRK12646 85 LIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFgAI 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 176 QKASITNrvgdFGSLLGVSGFPR---ATGSfefESSSVRLEELLTDRGVSLFPatPCATPLFLGSVAKPAQFPLHVRSPD 252
Cdd:PRK12646 165 QSFMITV----FGGLALLVGFIMlyiMTGT---NNITEILGQADHIKNHGLFI--PMIFMFLLGAFTKSAQFPFHIWLPR 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 253 AMEGPTPIPALIHAATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMV- 331
Cdd:PRK12646 236 AMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMa 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 332 ---LAPGVASYR-------------AAIFHLITHAHSKAPSSSGSGSVIHSvepvTGycpdrSQNTAFMGGLRTCMPITG 395
Cdd:PRK12646 316 mvgIGGGYAQHQqdaiasiyvfvlfAALFHLMNHAIFKCALFMGVGIIDHE----AG-----TRDIRILSGMRQLFPKMN 386
|
330 340
....*....|....*....|...
gi 255961341 396 TAFLSGTPPPRGIPPFARFRSKD 418
Cdd:PRK12646 387 LVMTIAALSMAGVPFLNGFLSKE 409
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
100-468 |
4.02e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 122.13 E-value: 4.02e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 100 ITTAGVMVMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAHACQKAS 179
Cdd:PRK08376 99 ATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYM 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 180 ITNRVGDFGSLLGVSGFPRATGSFEFESSSVRLEElltdrgvSLFPATPCATPLFLGSVA-KPAQFPLHVRSPDAM-EGP 257
Cdd:PRK08376 179 FVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSE-------NPTVVAKIALALFIAGLAmKSGAVPVHMWLPDAYpAAP 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 258 TPIPALIHAATmvAAGIYPVARMFPPSEAPPSMMSSISWV----GGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLA 333
Cdd:PRK08376 252 SSISAMLLVIK--QAGLYALARVLFSIYGPAINLATVGWViiilGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLG 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 334 PGV--ASYRA-------------AIFHLITHAHSKAPSSSGSGSVIHsvepVTGycpdrSQNTAFMGGLRTCMPITGTAF 398
Cdd:PRK08376 330 LGVglAALGDpamasygeialagGIYHIVNHALYKALLFLTAGAVIY----ETG-----TRNLNELGGLARTMPKTTIAF 400
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 399 LSGTPPPRGIPPFARFRSKDEIPNDGWLSRPILGWMAWCTAGPTGSHMLRTYLPTFegyyranaFGPPRP 468
Cdd:PRK08376 401 LIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAF--------FGPPSE 462
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
107-420 |
2.43e-28 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 120.52 E-value: 2.43e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 107 VMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIgPRFTRARAAHACQKASITNRVGD 186
Cdd:MTH00209 68 VMWFSTSYMAGEKFKKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLV-IYYQNSKSLSAGMLTALTNRVGD 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 187 FGSLLGVSGFpRATGSFEFESSSVRLEELLTdrgVSLFpatpcatpLFLGSVAKPAQFPLHVRSPDAMEGPTPIPALIHA 266
Cdd:MTH00209 147 ALLILSIAWM-LMHGNWNIFYLNFNSNLGSV---ISVL--------IVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHS 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 267 ATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVASYRAAIFHL 346
Cdd:MTH00209 215 STLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHL 294
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 255961341 347 ITHAHSKAPSSSGSGSVIHSVEpvtgycpdRSQNTAFMGGLRTCMPIT----GTAFLSGTppprGIPPFARFRSKDEI 420
Cdd:MTH00209 295 ITHALFKALLFICAGNIIHSHG--------HSQDIRMVGNLWYQMPITsiclNIANLSLC----GIPFLAGFYSKDLI 360
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
101-417 |
6.24e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 118.54 E-value: 6.24e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 101 TTAGVM--VMIYSDSHMPHDQGYLRFFA-YLGLpNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAHACQK 177
Cdd:PRK12667 90 LTALVMflILIYSYWYLEHESGPEWYYTlLLGL-EAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIK 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 178 ASITNRVGDFGSLLGVSGFPRATGSFEFESSSVRLEELLTDRGVSLFPATPCATPLFLG--SVA---KPAQFPLHVRSPD 252
Cdd:PRK12667 169 YALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGGLAGNPPLALGVALAlaLWAftiKAAIFPNHFWLPD 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 253 AM-EGPTPIPALIhAATMVAAGIYPVARMF--------PPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYST 323
Cdd:PRK12667 249 AHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYST 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 324 MSQPGYMVLAPGVAS---YRAAIFHLITHAHSKAPSSSGSGSVIHSVepvtgycpdRSQNTAFMGGLRTCMPITGTAFLS 400
Cdd:PRK12667 328 ISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGRKMPIASFAFLI 398
|
330
....*....|....*..
gi 255961341 401 GTPPPRGIPPFARFRSK 417
Cdd:PRK12667 399 GALSLVGIPPLNGFFSK 415
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
448-678 |
6.14e-27 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 110.01 E-value: 6.14e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 448 RTYLPTFEGYYRANAFG------PPRPPASVWEDRRYRASGRGagFAAGLLPTGCSDTTAAKLPVDRSGGTRSGDSRRGW 521
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNysgkknSSFYSISLWGKEGSKLINKN--FRTLLLLTMNNNEKVSFFSKKTYRIDGNVRNMTRP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 522 GSTVTHYSAVEHYkplLCPKESDDAMLFPLVVPTIPTFPVGSIGvqspIGLGTGFIDpqpdcwLDLL---LNYPRGIIQQ 598
Cdd:pfam01010 79 FITITHFDNKKTF---SYPHESDNTMLFPLLVLVLFTLFVGFIG----IPFNQEGID------LDILskwLTPSINLLHK 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 599 ------DWSELLPDATTSVATALSGILVASILHGrrPI---LQPP-------RIDPElEGISGYFPSYLYDWSYYRGYVD 662
Cdd:pfam01010 146 nsnnsvDWYEFVTNAIFSVSIAYFGIFIASFLYK--PVyssFQNLdlinsfvKKGPK-RIFLDKIINVIYNWSYNRGYID 222
|
250
....*....|....*.
gi 255961341 663 RYYNIVPVASVRILAK 678
Cdd:pfam01010 223 VFYTTSFTRGIRGLAE 238
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
98-417 |
2.95e-26 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 115.41 E-value: 2.95e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 98 VLITTAGVMVMIYSDSHMPHDQGYLRFFAylGLPNAF---MLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAHA 174
Cdd:PRK12644 81 LLVLGVGALVLLYCARYFDDDEPRLGRFA--AELVAFagaMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRA 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 175 CQKASITNRVGDFGSLLGVSGFPRATGSFefesssvRLEELLTDrgvslFPATPCATP----LFLGSVAKPAQFPLHVRS 250
Cdd:PRK12644 159 ALQALLVTTAGGLAMLVGIIILGQAAGTY-------RLSELLAD-----PPTGPAVSVavvlILVGALSKSAIVPFHFWL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 251 PDAMEGPTPIPALIHAATMVAAGIYPVARMFPP-SEAPPSMMSSISwVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGY 329
Cdd:PRK12644 227 PGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGfADVPVWRPTVLV-LGLATMLLGGWRALRQHDLKLILAYGTVSQLGF 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 330 MVLAPGVASYRAA---IFHLITHAHSKAPSSSGSGSVIHSvepvTGYCPDRSqntafMGGLRTCMPITGTAFLSGTPPPR 406
Cdd:PRK12644 306 LTVLVGIGTRDAAlagLAMLLAHALFKAALFLVVGIIDHS----TGTRDIRK-----LSGLGRRQPVLAVVAALAAASMA 376
|
330
....*....|.
gi 255961341 407 GIPPFARFRSK 417
Cdd:PRK12644 377 GLPPLLGFVAK 387
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
99-427 |
1.19e-25 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 113.36 E-value: 1.19e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 99 LITTAGVMVMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAHACQKA 178
Cdd:PRK12648 84 LILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 179 SITNRVGDFGSLLGVSGFPRATGSFEFessSVRLEELLTDRGVSLFPAtpcATPLFL-GSVAKPAQFPLHVRSPDAMEGP 257
Cdd:PRK12648 164 LTVTGAGGLALLAGVLLLGHIVGSYDL---DVVLAAGDLIRAHPLYPP---ALVLILlGAFTKSAQFPFHFWLPHAMAAP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 258 TPIPALIHAATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVA 337
Cdd:PRK12648 238 TPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLG 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 338 S---YRAAIFHLITHAHSKAPSSSGSGSVIHSvepvTGycpdrsqnTAFM---GGLRTCMPITGTAFLSGTPPPRGIPPF 411
Cdd:PRK12648 318 SplaAVAAIFHIINHATFKASLFMAAGIIDHE----TG--------TRDMrrlSGLRRLMPITATLAMVAAAAMAGVPLL 385
|
330 340
....*....|....*....|...
gi 255961341 412 ARFRSKD-------EIPNDGWLS 427
Cdd:PRK12648 386 NGFLSKEmffaetlDTHLLGSLD 408
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
181-420 |
6.34e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 106.85 E-value: 6.34e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 181 TNRVGDFGSLLGVSGFpratgsfefesssVRLEELLTDRGVSLFPATPCATPLFLGSVAKPAQFPLHVRSPDAMEGPTPI 260
Cdd:MTH00151 143 TNRIGDVLILLSIALL-------------VLLGHWSILSMWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPV 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 261 PALIHAATMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVASYR 340
Cdd:MTH00151 210 SALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPS 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 341 AAIFHLITHAHSKAPSSSGSGSVIHsvepvtgyCPDRSQNTAFMGGLRTCMPITGTAFLSGTPPPRGIPPFARFRSKDEI 420
Cdd:MTH00151 290 LALFHLYTHALFKALLFLCAGSIIH--------SSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLI 361
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
235-420 |
1.86e-23 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 105.23 E-value: 1.86e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 235 LGSVAKPAQFPLHVRSPDAMEGPTPIPALIHAATMVAAGIYPVARMFPpseappsMMSSISW-------VGGLTALLGAT 307
Cdd:MTH00207 187 IAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYP-------FLSSTYWfnpalllTASLTMLMAGL 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 308 IAPAQRDLKRVLAYSTMSQPGYMVLAPGVASYRAAIFHLITHAHSKAPSSSGSGSVIHSVEpvtgycpdRSQNTAFMGGL 387
Cdd:MTH00207 260 SAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHH--------HSQDLRTMGNL 331
|
170 180 190
....*....|....*....|....*....|...
gi 255961341 388 RTCMPITGTAFLSGTPPPRGIPPFARFRSKDEI 420
Cdd:MTH00207 332 TNQMPLTTSCLLIANLALCGSPFLSGFYSKDLI 364
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
99-418 |
2.88e-22 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 102.43 E-value: 2.88e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 99 LITTAGVMVMIYSDSHMPHDQGYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPYpsigprFTRARAAHACQKA 178
Cdd:PRK12650 87 LALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASF------FLIARSGSGGEAG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 179 SI-TNRVGDFGSLLGVSGFPRATGsfefESSSVRLEELLTDRGVSLFPATPCATPLFLGSVA--KPAQFPLHVRSPDAME 255
Cdd:PRK12650 161 SIrTLILTFFGGLTLLAAVAIAAT----QTGTTSLSGILHSDVWAEKPGLTTVVAVLIAVAAftKSAQFPFHFWLPEAMA 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 256 GPTPIPALIHAATMVAAGIYPVARMFPpseappsMMSSISW-------VGGLTALLGATIAPAQRDLKRVLAYSTMSQPG 328
Cdd:PRK12650 237 AITPVSAFLHAAAVVKAGIYLLLRFSP-------VFHDVAVwnwlliiVGMITALMGAVFAVQKTDLKKLTAYSTVSQLG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 329 YMVLAPGVAS---YRAAIFHLITHAHSKAPSSSGSGSVIHSvepvTGycpdrSQNTAFMGGLRTCMPITGTAFLSGTPPP 405
Cdd:PRK12650 310 WIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQ----AG-----TRDIRRLGSLWRRMPFTFVSVTIAALSM 380
|
330
....*....|...
gi 255961341 406 RGIPPFARFRSKD 418
Cdd:PRK12650 381 AAVPPLFGFVSKE 393
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
233-417 |
8.48e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 99.57 E-value: 8.48e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 233 LFLGSVAKPAQFPLHVRSPDAMEGPTPIPALIHAATMVAAGIYPVARMF-----PPSEAPPSMMSSISWVGGLTALLGAT 307
Cdd:PRK08375 208 VLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSL 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 308 IAPAQRDLKRVLAYSTMSQPGYMVLAPGVASYR---AAIFHLITHAHSKAPSSSGSGSVihsvepvtgYCPDRSQNTAFM 384
Cdd:PRK08375 288 AALGQDDVKRVLAYSTVSQMGYILLGLALLTPLalaAGLLHLLHHALMKGALFLAAGAI---------EVTYGTRRLSEL 358
|
170 180 190
....*....|....*....|....*....|...
gi 255961341 385 GGLRTCMPITGTAFLSGTPPPRGIPPFARFRSK 417
Cdd:PRK08375 359 SGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSK 391
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
106-420 |
1.13e-21 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 99.83 E-value: 1.13e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 106 MVMIYSDSHMPHDQGYLRFFaYLGLpnAF---MLGSVPSPNPMQIHVFRESVGMCPYpsigprftraraahaC------- 175
Cdd:MTH00165 69 MVIYYSKSYMSGDKNINRFI-YLVL--LFvlsMMLLIISPNLISILLGWDGLGLVSY---------------Clviyyqn 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 176 QKAS-------ITNRVGDFGSLLGVS---GFpratGSFEFESSSVRLEELLTDRGVSLFpatpcatpLFLGSVAKPAQFP 245
Cdd:MTH00165 131 KKSYnagmltaLSNRIGDVAILLSIAwmmNF----GSWNFIFYLDFMKNSFEMLLIGLL--------IMLAAMTKSAQIP 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 246 LHVRSPDAMEGPTPIPALIHAATMVAAGIYPVARMFppseaPPSMMSSISWV----GGLTAL---LGATIapaQRDLKRV 318
Cdd:MTH00165 199 FSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN-----NLLFSSFFSKFllliSLLTMFmagLGANF---EFDLKKI 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 319 LAYSTMSQPGYMVLAPGVASYRAAIFHLITHAHSKAPSSSGSGSVIHSVepvtgycpDRSQNTAFMGGLRTCMPITGTAF 398
Cdd:MTH00165 271 IALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNM--------SNSQDIRFMGGLSNFMPLTSSCF 342
|
330 340
....*....|....*....|....*...
gi 255961341 399 ------LSgtppprGIPPFARFRSKDEI 420
Cdd:MTH00165 343 nisnlsLC------GFPFLSGFYSKDLI 364
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
180-350 |
3.66e-20 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 94.60 E-value: 3.66e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 180 ITNRVGDFGSLLGVSGFPRATG---SFEFESSSVrleelltdrgvSLFpatpcatpLFLGSVAKPAQFPLHVRSPDAMEG 256
Cdd:MTH00095 133 LTNRIGDFFIFLFFSGFIFSSYyffSFSFFSSSM-----------ILM--------LLLTSFTKSAQFPFSSWLPKAMSA 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 257 PTPIPALIHAATMVAAGIYPVARMFPPSEApPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGV 336
Cdd:MTH00095 194 PTPVSSLVHSSTLVTAGLILLMNFSYLILN-MNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGS 272
|
170
....*....|....
gi 255961341 337 ASYRAAIFHLITHA 350
Cdd:MTH00095 273 GLSFVSFIHLLSHA 286
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
199-417 |
1.84e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 92.19 E-value: 1.84e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 199 ATGSFEFESSSVrleeLLTDRGVSLFPatpcatpLFLGSVAKPAQFPLHVRSPDAMEGPTPIPALIHAATMVAAGIYPVA 278
Cdd:PRK06589 193 KTGNLDFVSGGL----FSKNQSIILLL-------MFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIY 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 279 RM------FPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGV---ASYRAAIFHLITH 349
Cdd:PRK06589 262 KIllyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSH 341
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 255961341 350 AHSKAPSSSGSGSVIhsvepvTGYCPDRSQNtafMGGLRTCMPITGTAFLSGTPPPRGIPPFARFRSK 417
Cdd:PRK06589 342 SFAKICLFYSMGSIY------SLKKEDQVDK---LHGTSKSFPLISFIISISSLSLIGIPIFSGFISK 400
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
99-354 |
5.74e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 87.31 E-value: 5.74e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 99 LITTAGV--MVMIYSdshMPHDQGylRFFAYLGLpnaFMLGSV----PSPNPMQIHVFRESVGMCPYPSIG-PRFTRARA 171
Cdd:PRK07234 73 ILTNALVtlAVIFYC---WESAKT--RFFYAQLL---ILHGSVnaafVCADLISLYVALEVLSIATFLLVAyPRTDRAIW 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 172 AhACQKASITNRVGDFgSLLGVSGFPRATGSFEFesssvrleelltdrgVSLFPATPCATPL-FLGSVAKPAQFPLHVRS 250
Cdd:PRK07234 145 V-GLRYLFYSNVAMLF-YLIGAVLVYQANGTFAF---------------SGLATADPEAFALiALGLLVKGGIFVSGLWL 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 251 PDAMEGPTPIPALIHAATMVAAGIYPVARMFPPSEAPPSMmssISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYM 330
Cdd:PRK07234 208 PLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLI---VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFI 284
|
250 260
....*....|....*....|....
gi 255961341 331 VLAPGVasyrAAIFHLiTHAHSKA 354
Cdd:PRK07234 285 LAAPLV----GGLYAL-AHGLVKS 303
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
233-420 |
6.10e-17 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 84.43 E-value: 6.10e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 233 LFLGSVAKPAQFPLHVRSPDAMEG-PTPIPALIhAATMVAAGIYPVARM---FPPSEAPPSMMSSISWVGGLTALLGATI 308
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARIlylMQNANGWSSVLKLVIIMATLTVFFAELS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 309 APAQRDLKRVLAYSTMSQPGYMVLAPGV---ASYRAAIFHLITHAHSKAPSSSGSGSVIHSVepvtgycpdRSQNTAFMG 385
Cdd:PRK08377 291 ALRQKNVKRMIAYSSIGQVGMIALALALgtqAGVDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKFE 361
|
170 180 190
....*....|....*....|....*....|....*
gi 255961341 386 GLRTCMPITGTAFLSGTPPPRGIPPFARFRSKDEI 420
Cdd:PRK08377 362 GLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRI 396
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
233-417 |
3.70e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 82.35 E-value: 3.70e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 233 LFLGS--VAKPAQFPLHVRSPDAM-EGPTPIPALIHAAtMVAAGIY---------PVARMF---PPSEAPPSMMSSISWV 297
Cdd:PRK08668 200 LFLLAfgVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQ-LSKLGAYgfllvlyvlPGTKLFsefGTYRGVPLFNYILAWL 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 298 GGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVA---SYRAAIFHLITHAHSKAPSSSGSGSVIHsvepvtgyc 374
Cdd:PRK08668 279 GNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIY--------- 349
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 255961341 375 pdRSQNTAF--MGGLRTCMPITGTAFLSGTPPPRGIPPFARFRSK 417
Cdd:PRK08668 350 --RTGTTKIseMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
199-350 |
1.28e-15 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 80.16 E-value: 1.28e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 199 ATGSFEFESSSVRLEELLTDRGVSLFpatpcATPLFLGSVA-KPAQFPLHVRSPDAMEG-PTPIPALIHAATMVAAgIYP 276
Cdd:COG1007 179 ATGSLNLAGIAAALAAGGANSPLLLL-----GLVLVLAGLAfKLSAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAA 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 277 VARMFppSEAPPSMMSS----ISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYM---VLAPGVASYRAAIFHLITH 349
Cdd:COG1007 253 LLRLL--VEAFPGLAADwqllLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLllgLAAGTPLGVSAALFYLLAY 330
|
.
gi 255961341 350 A 350
Cdd:COG1007 331 L 331
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
182-417 |
5.34e-15 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 78.78 E-value: 5.34e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 182 NRVGDFGSLLGVSGFPRATGSFEFESSsvrleelltdRGVSLFPATPCATPL--FLGSVAKPAQFPLHVRSPDAM-EGPT 258
Cdd:PRK06521 173 AHAGALAILLAFGLLARESGSYDFAAM----------RAAHLSPFWASLVFLlaLFGFGAKAGLVPLHVWLPRAHpAAPS 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 259 PIPALIhAATMVAAGIYPVARM-FPPSEAPpsmmssISW-------VGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYM 330
Cdd:PRK06521 243 HVSALM-SGVMLKVAIYGILRVvFDLLGAP------GWWwgvlvlaLGAISAVLGVLYALAEHDLKRLLAYSTIENIGII 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 331 VLAPGVA--------------SYRAAIFHLITHAHSKAPSSSGSGSVIHSvepvTGycpdrSQNTAFMGGLRTCMPITGT 396
Cdd:PRK06521 316 FVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHA----TG-----TRDMEKLGGLIRRMPWTAW 386
|
250 260
....*....|....*....|.
gi 255961341 397 AFLSGTPPPRGIPPFARFRSK 417
Cdd:PRK06521 387 AFLIGCLAISALPPLNGFVSE 407
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
233-416 |
6.28e-15 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 78.05 E-value: 6.28e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 233 LFLGSVAKPAQFPLHVRSPDA-MEGPTPIPA-----LIHAATMVAAGIYPVARMFPPSEAPPSMMSsisWVGGLTALLGA 306
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAhSEAPSPVSAllsgvLLNVALYAVLRYYILIDAAIGSDFPGRLLL---IFGLLSVLVAA 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 307 TIAPAQRDLKRVLAYSTMSQPGYMVLAPGV----ASYrAAIFHLITHAHSKAPSSSGSGSVIHsvepVTGycpdrSQNTA 382
Cdd:PRK06458 297 FFLLRQRDIKRLFAYSSIEHMGLIAFALGIggplGIF-AALLHMLNHSLTKSAIFFASGNVLQ----KYG-----TRDIN 366
|
170 180 190
....*....|....*....|....*....|....
gi 255961341 383 FMGGLRTCMPITGTAFLSGTPPPRGIPPFARFRS 416
Cdd:PRK06458 367 VIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
87-350 |
1.65e-14 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 76.78 E-value: 1.65e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 87 YSIDPPTPTTPVLITTAGVMVMIYSDSHMPHDQG----YLRFFAYLGlpnAFMLGSvpSPNPMQIHVFRESVGMCPYPSI 162
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYLEDRGRgefyLLVLFALLG---MMVMVS--ANDLLTLFLGLELLSLPLYALA 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 163 GPRFTRARAAHACQKASItnrVGDFGS---LLGVSGFPRATGSFEFESSSVRLEELLTDRGVSLFpatpcATPLFLGSVA 239
Cdd:PRK05777 144 ALRRDRRRSLEAAIKYFV---LGALASgflLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLF-----GLVFLLVGLA 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 240 -KPAQFPLHVRSPDAMEG-PTPIPALIHAATMVAAgIYPVARMFppSEAPPSMMSSISWV----GGLTALLGATIAPAQR 313
Cdd:PRK05777 216 fKLSAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLL--VVAFGGLSEDWQQVlaiiAIASMLVGNLAALSQT 292
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 255961341 314 DLKRVLAYSTMSQPGYM---VLAPGVASYRAAIFHLITHA 350
Cdd:PRK05777 293 NIKRLLAYSSIAHAGYLlvgLAAGTAEGYSAVLFYLLAYL 332
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
168-364 |
4.38e-14 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 75.50 E-value: 4.38e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 168 RARAAHACQKASITNRVGDfGSLLGVSGFP-RATGSFEFESSSVRLeelltDRGVSLFPATPCATPLFLGSVAKPAQFPL 246
Cdd:PRK08168 146 RPFARLAAHKKFIADRLAE-LLLLAAAALAyLEVGSLSLSALWAHL-----AAQGASPSLQAAALLLVLAVILKTAQLPV 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 247 HVRSPDAMEGPTPIPALIHAAtMVAAGIYPVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQ 326
Cdd:PRK08168 220 HGWLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQ 298
|
170 180 190
....*....|....*....|....*....|....*...
gi 255961341 327 PGYMVLAPGVASYRAAIFHLITHAHSKAPSSSGSGSVI 364
Cdd:PRK08168 299 MGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
190-417 |
5.88e-14 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 75.32 E-value: 5.88e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 190 LLGVSGFPRATGSFEFESssvrleelltdrgvsLFPATPCATPL-FLGSVAKPAQFPLHVRSPDAMEGPTPIPALIHAAT 268
Cdd:PRK12668 160 LAGILLHYAETGSFAFGA---------------IAGLGGTAAWLiLIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAF 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 269 MVAAGIYPVARMFPPSEAppsmmssISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVASYRA---AIFH 345
Cdd:PRK12668 225 TTKTAVYALARAFPGTEL-------LIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAH 297
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 255961341 346 LITHAHSKAPSSSGSGSVIHsvepVTGycpdRSQNTAfMGGLRTCMPITGTAFLSGTPPPRGIPPFARFRSK 417
Cdd:PRK12668 298 AFNHILYKGLLFMSAGAVLY----RTG----TEKLTE-LGGLYRSMPLTALFCLVGALSISAFPLFSGFVSK 360
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
233-399 |
1.16e-13 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 73.96 E-value: 1.16e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 233 LFLGSVAKPAQFPLHVRSPDA-MEGPTPIpALIHAATMVAAGIYPVAR----MFPpsEAPPSMMSSISWVGGLTALLGAT 307
Cdd:COG1008 215 FFIAFAVKVPMFPFHTWLPDAhVEAPTAG-SVLLAGVLLKMGGYGLLRfalpLFP--EASAYFAPLLAALGVIGIIYGAL 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 308 IAPAQRDLKRVLAYSTMSQPGYMVLapGVASYRA-----AIFHLITHAHSkapsssgSGSVIHSVepvtGYCPDR--SQN 380
Cdd:COG1008 292 VALAQTDLKRLIAYSSVSHMGFVLL--GIFALNPlglqgAVLQMVSHGLI-------TAALFLLV----GVLYDRthTRD 358
|
170
....*....|....*....
gi 255961341 381 TAFMGGLRTCMPITGTAFL 399
Cdd:COG1008 359 IADLGGLAKRMPVLAALFL 377
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
98-417 |
2.95e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 66.68 E-value: 2.95e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 98 VLITTAGVMVMIYSDSHMPHDQGYLRFFAYLGLPNAF---MLGSVPSPNPMQIHVFRESVGMCPYPSIGPRFTRARAAHA 174
Cdd:PRK08667 84 ILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFilsMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 175 CQKASITNRVGDFGSLLGVSGFPRATGSFEFesssvrleelltdrGVSLFPATPCATP---LFLGSVAKPAQFPLHVRSP 251
Cdd:PRK08667 164 GIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL--------------SPLGASAGILSLVfllLFLGFGIKAGIIPFHKWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 252 DAMEG-PTPIPALIhAATMVAAGIYPVARMFPPSEAPPSMMS-SISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGY 329
Cdd:PRK08667 230 YAHPAsPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWGvLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGI 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 330 MVLAPGV--------------ASYRAAIFHLITHAHSKAPSSSGSGSVIHSVEpvtgycpdrSQNTAFMGGLRTCMPITG 395
Cdd:PRK08667 309 ILMGIGLyvifgvygldtlalLALGGALFHSLNHALFKSLLFLTAGSVVHATG---------TRNIEKMGGLVKLMPYTS 379
|
330 340
....*....|....*....|..
gi 255961341 396 TAFLSGTPPPRGIPPFARFRSK 417
Cdd:PRK08667 380 ALFLVGAVSIAALPPFNGFASE 401
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
233-414 |
4.57e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 65.73 E-value: 4.57e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 233 LFLGSVAKPAQFPLHVRSPDAM-EGPTPIpALIHAATMVAAGIYPVAR----MFPpsEAPPSMMSSISWVGGLTALLGAT 307
Cdd:TIGR01972 209 FFIAFAVKVPLFPLHTWLPDAHvEAPTAG-SVILAGVLLKMGTYGFLRfnlpLFP--DASLYFAPVLAALGVIAIIYGAL 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 308 IAPAQRDLKRVLAYSTMSQPGYMVLapGVAS-----YRAAIFHLITHAHSkapsssgSGSVIHSVepvtGYCPDR--SQN 380
Cdd:TIGR01972 286 IALAQTDIKRLIAYSSISHMGFVLL--GIFSfnelgISGAVFQMISHGLI-------TAALFLLV----GVLYERahTRD 352
|
170 180 190
....*....|....*....|....*....|....
gi 255961341 381 TAFMGGLRTCMPITGTAFLSGTPPPRGIPPFARF 414
Cdd:TIGR01972 353 IAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGF 386
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
233-372 |
5.82e-11 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 65.44 E-value: 5.82e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 233 LFLGSVAKPAQFPLHVRSPDAMEGPTPIPALIHAATMVAAGIYpVARmFPP--SEAPPSMM----SSISwvggltALLGA 306
Cdd:PRK08601 210 LILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIM-LTR-FSPlfHDDIAQILllifASIS------VLIGT 281
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 255961341 307 TIAPAQRDLKRVLAYSTMSQPGYMVLAPGVASYRAAIFHLITHAHSKAPSSSGSGSVIHSVEPVTG 372
Cdd:PRK08601 282 GISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFNIVKQ 347
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
240-417 |
6.97e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 65.36 E-value: 6.97e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 240 KPAQFPLHVRSPDAMEGP-TPIPALIhAATMVAAGIYPVARMFPP--SEAPPSMMSSISWVGGLTALLGATIAPAQRDLK 316
Cdd:PRK07691 222 KAGLFPLYFWLPGSYYAPpIAIAALF-GALLTKVGVYAIARTFTLffSHDTSFTHYLILILALLTIIFGVIGAVAYFDIK 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 317 RVLAYSTMSQPGYMVLAPGV---ASYRAAIFHLITHAHSKAPSSSGSGSVIHsvepVTGYCPDRSqntafMGGLRTCMPI 393
Cdd:PRK07691 301 KIIIYNIMIAVGVILVGVAMmteSGMIGAIYYLIHDMIVKAALFLLIGIMIK----ITGTTDLKK-----MGGLIKRYPV 371
|
170 180
....*....|....*....|....
gi 255961341 394 TGTAFLSGTPPPRGIPPFARFRSK 417
Cdd:PRK07691 372 LGWMFFIAALSLAGIPPLSGFYGK 395
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
185-417 |
2.15e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 63.43 E-value: 2.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 185 GDFGS---LLGVSGFPRATGSFEFESSSVRLEELLTDRGVSLFpatpcATPLFLGSVA-KPAQFPLHVRSPDAMEG-PTP 259
Cdd:TIGR01770 162 GAFSSgllLFGISLIYGFTGSLNFEDLLLFLSNGMLNISLLLL-----GIVLILVGLLfKLSAVPFHMWVPDVYEGaPTP 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 260 IPALIHAATMVaAGIYPVARMFP--PSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYM---VLAP 334
Cdd:TIGR01770 237 VTAFFSIVPKI-AIFAVFLRLFLyiLFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYIligLLAG 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 335 GVASYRAAIFHLITHAHskapSSSGSGSVIHSVEpVTGYCPDRSQNTafMGGLRTCMPITGTAFLSGTPPPRGIPPFARF 414
Cdd:TIGR01770 316 TLEGIKAVLFYIFIYAL----MSLGAFGVLSLLR-SYKDEWIEYISD--FAGLFKTNPILAILILIFMFSLAGIPPLAGF 388
|
...
gi 255961341 415 RSK 417
Cdd:TIGR01770 389 FGK 391
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
75-125 |
5.27e-10 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 55.13 E-value: 5.27e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 255961341 75 WIYNESVASETGYSIDPPTPTTPVLITTAGVMVMIYSDSHMPHDQGYLRFF 125
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
199-417 |
7.62e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 58.83 E-value: 7.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 199 ATGSFEFESSSVRLEELLTDRGVSLFPAtpcatpLFLGSVAKPAQFPLHVRSPDAM-EGPTPIPAlIHAATMVAAGIYPV 277
Cdd:PRK12665 187 ATGTLNMADLAVRLDELPSGTRTALFAV------LLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAI 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 278 AR----MFPPSEAPPSMMssisWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVAS---YRAAIFHLITHA 350
Cdd:PRK12665 260 IRthtlLFPGGGLDTLLM----VVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHI 335
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 255961341 351 hskapsssgsgSVIHSVEPVTGYCPDRSQNTAF--MGGLRTCMPITGTAFLSGTPPPRGIPPFARFRSK 417
Cdd:PRK12665 336 -----------TVQTTLFLVVGLIERQAGSSSLrrLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGK 393
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
268-417 |
1.46e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 57.73 E-value: 1.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 268 TMVAAGIYpVARMFPPSEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGV---ASYRAAIF 344
Cdd:PRK06277 244 VLVALMLV-IFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALgtpLGIVAGIF 322
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 255961341 345 HLITHAHSKAPSSSGSGSVIhsvepvtgYCpDRSQNTAFMGGLRTCMPITGTAFLSGTPPPRGIPPFARFRSK 417
Cdd:PRK06277 323 HAINHVIYKSALFLGAGIVS--------YR-TKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSK 386
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
232-349 |
7.68e-08 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 55.48 E-value: 7.68e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 232 PLFLGSVAKPAQFPLHVRSPDA-MEGPTPIPALIhAATMVAAGIYPVAR----MFPpsEAPPSMMSSISWVGGLTALLGA 306
Cdd:PRK06473 210 PILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRfgvgLFP--EAWVYLAPWLATWAVVSVLYGA 286
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 255961341 307 TIAPAQRDLKRVLAYSTMSQPGYMVLAPGVA---SYRAAIFHLITH 349
Cdd:PRK06473 287 SCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISH 332
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
233-417 |
1.48e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 54.76 E-value: 1.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 233 LFLGSVAKPAQFPLHVRSPDA-MEGPTPIPALIhAATMVAAGIYPVARMFP---PSEAPPSMMSSISWVGGLTALLGATI 308
Cdd:PRK08676 212 IFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSAllrQSGAAEQFSNVLIGLGIFSIAVAAFS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 309 APAQRDLKRVLAYSTMSQPGYMVLAPGVASYRA---AIFHLITHAHSKApSSSGSGSVIHSvepvtGYCPDRSQNtafMG 385
Cdd:PRK08676 291 MLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKS-GLFFSAGILHR-----QYRSDRFDR---IF 361
|
170 180 190
....*....|....*....|....*....|..
gi 255961341 386 GLRTCMPITGTAFLSGTPPPRGIPPFARFRSK 417
Cdd:PRK08676 362 DVFRLQPVAAWGVILGSAAIIGMPPFPLFLSK 393
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
177-417 |
2.08e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 54.19 E-value: 2.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 177 KASITNRVGDFGSLLGVSGFPRATGSFEFESSSVRLEELltdRGVSlfPATPCATPLFLGSVAKPAQFPLHVRsPDAMEG 256
Cdd:PRK12663 162 KYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDM---GDTA--TLTTIALLFLLAFGMKAALFPFMWL-PAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 257 PTPIPALIHAATMVAAGIYPVAR----MFPPSEAPPSMMssISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVL 332
Cdd:PRK12663 236 PNTEVAALFAALLTKVGIYALIRvftlLFPQERELLHPL--LATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILL 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 333 APGVASYRA---AIFHLithAHS---KAPSSSGSGSVIHsvepVTGYcpdrsQNTAFMGGLRTCMPITGTAFLSGTPPPR 406
Cdd:PRK12663 314 GLALGTPAGingAIFYL---VHDmvvKTALFLIAGSLVR----LTGY-----RSLQYLGGLYRKEPLFGALFLILIFAIG 381
|
250
....*....|.
gi 255961341 407 GIPPFARFRSK 417
Cdd:PRK12663 382 GLPPFSGFWGK 392
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
244-414 |
2.65e-07 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 53.67 E-value: 2.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 244 FPLHVRSPDAM-EGPTPIpALIHAATMVAAGIYPVAR----MFPpsEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRV 318
Cdd:PRK05846 228 FPLHTWLPDAHvQAPTAG-SVLLAGILLKMGAYGLLRfslpLFP--DASHEFAPIIITLGVIAIIYGALVALAQTDIKKL 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 319 LAYSTMSQPGYMVLAPGVASYRA---AIFHLITHAHSkapsssgSGSVIHSVepvtGYCPDR--SQNTAFMGGLRTCMPI 393
Cdd:PRK05846 305 IAYSSISHMGFVTLGIFAGNQLGiqgAIFQMISHGLS-------SAALFLLV----GVLYDRlhTRDIADYGGLAKVMPV 373
|
170 180
....*....|....*....|.
gi 255961341 394 TGTAFLSGTPPPRGIPPFARF 414
Cdd:PRK05846 374 LAAFFLFFAMASLGLPGTSGF 394
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
200-349 |
8.67e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 52.02 E-value: 8.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 200 TGSFEFESSSVRLEELLTDRGVSLFpatpcaTPLFLGSVAKPAQFPLHVRSPDAMEGPTPIPALIHAATMVAAGIYPVAR 279
Cdd:PRK07363 184 SGSTSFDYDAISTQNLSLNTQLILL------TGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLR 257
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 255961341 280 ----MFPpsEAPPSMMSSISWVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVA---SYRAAIFHLITH 349
Cdd:PRK07363 258 fglqLFP--QTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGtqlSLLGAVAQMISH 332
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
240-330 |
1.27e-06 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 51.54 E-value: 1.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 240 KPAQFPLHVRSPDAMEG-PTPIPALIHAATMVAAGIYPVaRM----FPPSEAPPSMMSSIswVGGLTALLGATIAPAQRD 314
Cdd:CHL00049 227 KLSLAPFHQWTPDVYEGsPTPVVAFLSVTSKVAASALAT-RIfdipFYFSSNEWHLLLEI--LAILSMILGNLIAITQTS 303
|
90
....*....|....*.
gi 255961341 315 LKRVLAYSTMSQPGYM 330
Cdd:CHL00049 304 MKRMLAYSSIGQIGYV 319
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
36-417 |
1.31e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 51.66 E-value: 1.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 36 CRRLYASISTSPSSIAMSIPLHTSWRQLAGDPIHRYPRSWIynesVASETGYSIDPPTPTTPVLITTAGVMVMIY----S 111
Cdd:PRK12662 25 NRKLVKIISCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWG----PPYGIELRVDILSATMLVLVNFIAVMSVLYgiypN 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 112 DSHMPHDQgYLRFFAYLGLPNAFMLGSVPSPNPMQIHVFRESVGMCPY--PSIGprfTRARAAHACQKASITNRVGDFGS 189
Cdd:PRK12662 101 RKEISVNK-IPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYvlVAMG---RDKKALVAAFEYLIIGTIGATFY 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 190 LLGVSGFPRATGSFEFESSSVRLEELLTDRGVSLfpATPCatpLFLGSVAKPAQFPLHVRSPDAM-EGPTPIpALIHAAT 268
Cdd:PRK12662 177 LIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQI--GVLF---IMVGLFIKAALFPFHKWLIQAYsEAPSFI-SVFFSGT 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 269 MVAAGIYPVARM--------FPPSEAPPSMMSSIswVGGLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVASYR 340
Cdd:PRK12662 251 STKVMIYLIIRIvydvfkanFVFTTLPFNNVFMI--LAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYY 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 341 ---AAIFHLITHAHSKAPSSSGSGSVIHSVEpvtgycpdrSQNTAFMGGLRTCMPITGTAFLSGTPPPRGIPPFARFRSK 417
Cdd:PRK12662 329 glaAAVAYIVNHSIVKSALFMVSGSISYHFG---------TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAK 399
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
240-402 |
5.35e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 49.64 E-value: 5.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 240 KPAQFPLHVRSPDAM-EGPTPIpALIHAATMVAAGIYPVAR----MFPpsEAPPSMMSSISWVGGLTALLGATIAPAQRD 314
Cdd:PRK12561 198 KLPIFPLHTWLPDAHgEASAPV-SMILAGVLLKMGGYALIRfnvqMLP--DAHVYFAPALAILGVVNIIYGALNAFAQDN 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 315 LKRVLAYSTMSQPGYMVLapGVASYRA-----AIFHLITHahskapsssgsGSVIHSVEPVTGYCPDRSQNTAF--MGGL 387
Cdd:PRK12561 275 VKRRLAYSSVSHMGFVLL--GIAAFTDlgisgAMLQMISH-----------GLIAAALFFLTGVTYERTHTLSIpnMGGL 341
|
170
....*....|....*
gi 255961341 388 RTCMPITGTAFLSGT 402
Cdd:PRK12561 342 AKVMPKTFALFTASS 356
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
209-349 |
7.53e-05 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 45.81 E-value: 7.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 209 SVRLEELLTDRGVSLFPATPCATPLFLGSVA-KPAQFPLHVRSPDAMEG-PTPIPALIHAATMvAAGIYPVARMFppSEA 286
Cdd:PRK02504 191 STQLSAIALALITSPSLGLALALVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLL--VTA 267
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 255961341 287 PPSMmsSISWVGGLTAL------LGATIAPAQRDLKRVLAYSTMSQPGYMV--LAPGV-ASYRAAIFHLITH 349
Cdd:PRK02504 268 FPSF--DEQWKLLFTALailsmvLGNVVALAQTSMKRMLAYSSIGQAGFVMigLVAGTeAGYASMVFYLLAY 337
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
220-353 |
1.92e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 44.87 E-value: 1.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 220 GVSLFPATPCatpLFLGSVAKPAQFPLHVRSPDAMEGPTPIPALIHAATMVAAGIYPVAR----MFPPSEAPPSMMSSIs 295
Cdd:MTH00063 153 GSGSFLCCLF---FFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRydylLGFSWLSIFFSVLLL- 228
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 255961341 296 wvggLTALLGATIAPAQRDLKRVLAYSTMSQPGYMVLAPGVASYRAAIFHLITHAHSK 353
Cdd:MTH00063 229 ----LTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSK 282
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
245-414 |
2.11e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 41.35 E-value: 2.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 245 PLHVRSPDAMEGPTPIPALIHAATMVAAGIYPVARMFPPSEAPPSMMSSISWV-GGLTALLGATIAPAQRDLKRVLAYST 323
Cdd:PRK08042 198 PLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVlGMITAFVGGLYALMEHNIQRLLAYHT 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255961341 324 MSQPGYMVLAPG--------------VASYRAAIFHLITHAHSKAPSSSGSGSVIHSvepvTGYcpdrsQNTAFMGGLRT 389
Cdd:PRK08042 278 LENIGIILLGLGagvtgialeqpaliALGLVGGLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RDIEKLGGIGK 348
|
170 180
....*....|....*....|....*
gi 255961341 390 CMPITGTAFLSGTPPPRGIPPFARF 414
Cdd:PRK08042 349 KMPVISIAMLVGLMAMAALPPLNGF 373
|
|
| |
