|
Name |
Accession |
Description |
Interval |
E-value |
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
1-498 |
0e+00 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 952.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 1 MNYFPWLTIVAVLPIFGGSLIFFLPHKGNKVIRLYTLFICIIELLLTTYAFYYYFQLDDPLMQLTEDYKWIDFFDFYWRL 80
Cdd:CHL00011 1 MNYFPWLTIIVVLPIFAGSLIFFLPHRGNKVIRWYTLCICLLELLLTTYAFCYHFQLDDPLIQLKEDYKWINFFDFHWRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 81 GIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKR 160
Cdd:CHL00011 81 GIDGLSIGPILLTGFITTLATLAAWPVTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 161 LYSATKFILYTAGSSVFLLLGVLGIGLYASNEPTLNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGE 240
Cdd:CHL00011 161 LYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTLNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHGE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 241 AHYSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGI 320
Cdd:CHL00011 241 AHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 321 GSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAELIV 400
Cdd:CHL00011 321 GSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 401 FFGIITSQNFFLIQKILITFVMAIGTILTPIYSLSMLRQMFYGYKFFNAPNSYFFDSGPRELFISISIFLPVIGIGLYPD 480
Cdd:CHL00011 401 FFGIITSQKYLLMPKILITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNSYFFDSGPRELFISICILLPVIGIGIYPD 480
|
490
....*....|....*...
gi 313184041 481 FVFSLSVDKVETLISNFF 498
Cdd:CHL00011 481 FVLSLSVDKVEAILSNYF 498
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
1-495 |
0e+00 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 562.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 1 MNYFPWLTIVAVLPIFGGSLIFFLPHKGN-KVIRLYTLFICIIELLLTTYAFYYYFQLDDPLMQLTEDYKWIDFFDFYWR 79
Cdd:PRK02546 3 LANFPWLTTIILFPIVAALLIPFIPDKGDgKTVRWYALIVGLIDFLITVYAFYTGYDFSNPGLQLVESYSWLPQLGLTWS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 80 LGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKK 159
Cdd:PRK02546 83 VGADGLSMPLILLTGFITTLAVLAAWPVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 160 RLYSATKFILYTAGSSVFLLLGVLGIGLYASNePTLNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHG 239
Cdd:PRK02546 163 RQYAATKFILYTAGSSLFILLAALAMAFYGDT-PTFDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHG 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 240 EAHYSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIG 319
Cdd:PRK02546 242 EATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIG 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 320 IGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAELI 399
Cdd:PRK02546 322 IGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELM 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 400 VFFGIITSQNFFLIQKILITFVMAIGTILTPIYSLSMLRQMFYGYKFFN-APNSYFFDSGPRELFISISIFLPVIGIGLY 478
Cdd:PRK02546 402 VFVGFATSDAYTLPFRVVVVFLAAVGVILTPIYLLSMLREIFFGPENKElVSHEKLVDAEPREVFIIACLLVPIIGIGLY 481
|
490
....*....|....*..
gi 313184041 479 PDFVFSLSVDKVETLIS 495
Cdd:PRK02546 482 PKLVTQSYDATTNQLVA 498
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
27-479 |
0e+00 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 551.17 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 27 KGNKVIRLYTLFICIIELLLTTYAFYYYFQLDDPLMQLTEDYKWIDFFDFYWRLGIDGLSIGPILLTGFITTLATLAAWP 106
Cdd:PRK12561 2 KEGKTVRWYALGVGLADFALMCYVFWQHYDPSSSSLQLVERYAWLPQIGLEWSLGVDGLSMPLVLLSGLITTLSIFASWK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 107 VTRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRLYSATKFILYTAGSSVFLLLGVLGIG 186
Cdd:PRK12561 82 VTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 187 LYASNePTLNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINM 266
Cdd:PRK12561 162 LSGDT-FTFDLAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 267 EFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALF 346
Cdd:PRK12561 241 QMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALF 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 347 FLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAELIVFFGIITSQNFFLIQKILITFVMAIGT 426
Cdd:PRK12561 321 FLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGITSSDVYSSTFRTITILLAAVGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 313184041 427 ILTPIYSLSMLRQMFYGYKFFNAP-NSYFFDSGPRELFISISIFLPVIGIGLYP 479
Cdd:PRK12561 401 ILTPIYLLSMLRRVFYGPRSELLPaLAVVEDAKPRELFIALSLLVPIIGIGFYP 454
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
4-497 |
4.84e-161 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 465.32 E-value: 4.84e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 4 FPWLTIVAVLPIFGGSLIFFLPHKGNKVIRLYTLFICIIELLLTTYAfYYYFQLDDPLMQLTEDYKWIDFFDFYWRLGID 83
Cdd:COG1008 3 MPLLSLLILLPLLGALLLLLLPRRNARLARWVALAVSLLTLLLSLYL-LAGFDPGTGGFQFVESYPWIPSLGISYHLGVD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 84 GLSIGPILLTGFITTLATLAAWP-VTRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRLY 162
Cdd:COG1008 82 GISLPLVLLTALLTPLAILASWNeIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGERRIY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 163 SATKFILYTAGSSVFLLLGVLGIGlYASNEPTLNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAH 242
Cdd:COG1008 162 AAIKFFLYTLAGSLLMLVAILALY-FLAGALTFDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 243 YSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGS 322
Cdd:COG1008 241 TAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 323 LSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAELIVFF 402
Cdd:COG1008 321 LNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 403 GIITSQnffliqkILITFVMAIGTILTPIYSLSMLRQMFYGYkfFNAPNSYFFDSGPRELFISISIFLPVIGIGLYPDFV 482
Cdd:COG1008 401 GAFQVN-------PWLAILAALGLILTAAYLLWMYQRVFFGP--LKEELAELPDLNPRELAVLAPLAALILLLGLYPQPL 471
|
490
....*....|....*
gi 313184041 483 FSLSVDKVETLISNF 497
Cdd:COG1008 472 LDLIEPSVEALLARV 486
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
7-497 |
1.77e-133 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 395.08 E-value: 1.77e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 7 LTIVAVLPIFGGSLIFFLPHKGNKVIRLYTLFICIIELLLTTYAFYYyFQLDDPLMQLTEDYKWIDFFDFYWRLGIDGLS 86
Cdd:TIGR01972 1 LSLLIFLPLIGALLILLLPSNKDGKARWIALVVALATLLLSLLLLFQ-FDPTGSGFQFTEDIPWIPALGISYHLGVDGIS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 87 IGPILLTGFITTLATLAAWP-VTRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRLYSAT 165
Cdd:TIGR01972 80 LLLVLLTALLTLLAILASWEsIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAM 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 166 KFILYTAGSSVFLLLGVLGIglYASNEPTLNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYST 245
Cdd:TIGR01972 160 KFFLYTLAGSLLMLLAILGL--YFLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 246 CMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSD 325
Cdd:TIGR01972 238 SVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNE 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 326 MGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAELIVFFGII 405
Cdd:TIGR01972 318 LGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSF 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 406 TSqnffliqKILITFVMAIGTILTPIYSLSMLRQMFYGyKFFNAPNSYFFDSGPRELFISISIFLPVIGIGLYPDFVFSL 485
Cdd:TIGR01972 398 KV-------NPVVAFLAALGIVLAAAYMLTLYKRVFFG-ELSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLLDL 469
|
490
....*....|..
gi 313184041 486 SVDKVETLISNF 497
Cdd:TIGR01972 470 TEPSVNNLLSQV 481
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
4-497 |
4.04e-131 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 389.56 E-value: 4.04e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 4 FPWLTIVAVLPIFGGSLIFFLPHKGNKVIRLYTLFICIIELLLTTYAFYYyFQLDDPLMQLTEDYKWIDFFDFYWRLGID 83
Cdd:PRK05846 3 WPLLSLLIFLPLIGGLLVLLTERFGARLARWIALIGTLLTLLLSLVLWIG-FDSSNAGFQFVEKHPWIPRFGISYHLGVD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 84 GLSIGPILLTGFITTLATLAAW-PVTRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRLY 162
Cdd:PRK05846 82 GISLLLVVLTALLTPLAVLASWeEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGGKNRIY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 163 SATKFILYT-AGSSVFLLLGVLGIGLYASNEPTLNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEA 241
Cdd:PRK05846 162 AATKFFLYTlLGSLLMLVAIIYLVVVYYNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVQA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 242 HYSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIG 321
Cdd:PRK05846 242 PTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIF 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 322 SLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAELIVF 401
Cdd:PRK05846 322 AGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 402 FGIITSqnffliqKILITFVMAIGTILTPIYSLSMLRQMFYGYKffNAPNSYFFDSGPRELFISISIFLPVIGIGLYPDF 481
Cdd:PRK05846 402 LGSFQV-------NPVIAFIATTGLILAAVYSLWLYQRVMFGPV--KNEVAKLKDLNGRELLILLPLVALLLLLGVYPKP 472
|
490
....*....|....*.
gi 313184041 482 VFSLSVDKVETLISNF 497
Cdd:PRK05846 473 LLDVIHPSVENLLQWV 488
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
7-475 |
1.36e-93 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 293.14 E-value: 1.36e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 7 LTIVAVLPIFGGSLIFFLPHKGN-KVIRLYTLFICIIELLLTTyAFYYYFQLDDPLMQLTEDYKWIDFFDFYWRLGIDGL 85
Cdd:PRK06473 2 LSALIWIPLLGAILIGFWPSGINgKLARSVALVIASVLLLLSL-VLAFQFDPGNPNQQFTEFIPWIDSLGLSYHLGVDGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 86 SIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRLYSAT 165
Cdd:PRK06473 81 SLPLLVLNSLLTLIAIYSSDESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAAT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 166 KFILYTAGSSvFLLLGVLGIGLYASNEPTLNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYST 245
Cdd:PRK06473 161 KFLLYTAISG-ILILVSFLGLVWLSGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 246 CMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSD 325
Cdd:PRK06473 240 SVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATP 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 326 MGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVP---VPKIFTTFSILSMASLALPGMSGFVAELIVFF 402
Cdd:PRK06473 320 LSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPergLPITGSLMILGVMASAGIPGMVGFIAEFLVFR 399
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 313184041 403 GiitSQNFFLIQkiliTFVMAIGTILTPIYSLSMLRQMFYGY---KFFNAPNSYFFDSGPRelfISISIFLPVIGI 475
Cdd:PRK06473 400 G---SFPIFPVQ----TLLCMIGTGLTAVYFLLLVNRVFFGRltaELSNLPRVLWSERLPA---LVLAVLIVVLGI 465
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
7-443 |
1.84e-81 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 261.57 E-value: 1.84e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 7 LTIVAVLPIFGGSLIFFLPHK-GNKVIRLYTLFICIIELLLTTYaFYYYFQLDDPLMQLTEDYKWIDFFDFYWRLGIDGL 85
Cdd:PRK07363 2 LSVLLWLPILGAIIIGFFPGNlPSARLRQITLVFAVLVLAWSLF-LLTQFDLSDPGMQFQEYLPWNEPLGLSYSLGVDGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 86 SIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRLYSAT 165
Cdd:PRK07363 81 SLPLLVLNSLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGYASI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 166 KFILYTAGSSVFLLLGVLGIGlYASNEPTLNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYST 245
Cdd:PRK07363 161 KFLIYTAVSGLLVLAAFLGIV-WLSGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 246 CMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSD 325
Cdd:PRK07363 240 AILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQ 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 326 MGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSIL---SMASLALPGMSGFVAELIVFF 402
Cdd:PRK07363 320 LSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLvlaGMASAGIPGLVGFVAEFIVFQ 399
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 313184041 403 GIITSqnfFLIQKILItfVMAIGtiLTPIYSLSMLRQMFYG 443
Cdd:PRK07363 400 GSFST---FPIPTLLC--IVASG--LTAVYFVILLNRTCFG 433
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-432 |
4.64e-61 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 206.15 E-value: 4.64e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 1 MNYFPWLTIVavLPIFGGSLIFFLPHKGnKVIRLYTLFICIIELLLTTYAFYYYFQLDDPLMQLTEdykWIDFFDFYwrL 80
Cdd:COG0651 1 MSHLLILPVL--LPLLAAALLLLLGRRR-RLQRALSLLASLALLALALALLLQVLAGGPLVYALGG---WPAPFGIV--L 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 81 GIDGLSIGPILLTGFITTLATLAAWPVTRD---SRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGG 157
Cdd:COG0651 73 VADRLSALFLLLTALVALAVLLYSIGYMRHerrGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 158 KKRLYSATKFILYTAGSSVFLLLGVLGIGLYASnepTLNFE---TSANQSYPVALEIIFYIgFLIAFAVKSPIIPFHTWL 234
Cdd:COG0651 153 KEALRAGLKYLILNLVGSALFLLGVGLLYGATG---TLNMAdlaARLAELDPGLLLAAFAL-LLVGFGIKAALFPLHFWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 235 PDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEFLP-RAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHM 313
Cdd:COG0651 229 PDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 314 GFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSG 393
Cdd:COG0651 309 GYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
410 420 430
....*....|....*....|....*....|....*....
gi 313184041 394 FVAELIVFFGIITSQNFFLIqkilitFVMAIGTILTPIY 432
Cdd:COG0651 389 FVSKWLLLQAALEAGAWLLA------AVLLLSSLLTLAY 421
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
6-482 |
4.91e-53 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 186.42 E-value: 4.91e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 6 WLTIVAVLPIFGGSLIFFLPHKGNKVIRLYTLFICIIELLLTTYAFYYYFQldDPLMQLTEDYKWIDF--FDFYWR---L 80
Cdd:MTH00204 2 GLSLIFLILFMGIINVMGVPRENSVKLKKRALEWSLAILFSTLVLWGAFDG--EGQFQFINLIEWIISptLNFQWGplvF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 81 GIDGLSIGPILLTGFITTLATLAAWPVTRD-SRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKK 159
Cdd:MTH00204 80 AVDGVSLFFILLTTLLIPICILISWKSIKFlFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSRE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 160 -RLYSATKFILYTAGSSVFLLLGVLGIGlyaSNEPTLNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTH 238
Cdd:MTH00204 160 eKVRASYYFFFYTFAGSVFMLLGIFQLY---SITGTTDYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAH 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 239 GEAHYSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIII 318
Cdd:MTH00204 237 VEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 319 GIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAEl 398
Cdd:MTH00204 317 GLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGE- 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 399 ivFFGIITSQNFFLIQKILITFvmaiGTILTPIYSLSmlrqmFYGYKFFNAPNSYFF---DSGPRELFISISIFLPVIGI 475
Cdd:MTH00204 396 --FFSLLAAFEYSLGLGVLVTS----GMVWSAAYSLY-----LYNRISFGGGSNYLLfsrDLNRRELLAILPLIIAIFLL 464
|
....*..
gi 313184041 476 GLYPDFV 482
Cdd:MTH00204 465 GIVPFII 471
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
7-479 |
7.55e-49 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 174.86 E-value: 7.55e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 7 LTIVAVLPIFGGSLIFFLPHKgnKVIRLYTLFICIIELLLTTYAFYYYFQLDDPLMQLTEDYKWIDFFDFYWR---LGID 83
Cdd:MTH00217 2 LELVFILPLIGILHLLIIPRD--NIVRLKKIALEWSLLTLTATILLWASFDGEGQFQAIKKFEWIPGIEPVFGpvvFAVD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 84 GLSIGPILLTGFITTLATLAAWPVTRD-SRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKK-RL 161
Cdd:MTH00217 80 GISIFFLILTALLTPICILISWNSIKFlIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREeKV 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 162 YSATKFILYTAGSSVFLLLGVLGIGLYASnepTLNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEA 241
Cdd:MTH00217 160 QASYYFFFYTFIGSVFMLLGIFTLYSYAG---TTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 242 HYSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIG 321
Cdd:MTH00217 237 PVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIF 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 322 SLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAElivF 401
Cdd:MTH00217 317 SHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGE---F 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 402 FGIITSQNFFLIQKILITFvmaiGTILTPIYSLSMlrqmfYGYKFFNAPNSYFF---DSGPRELFISISIFLPVIGIGLY 478
Cdd:MTH00217 394 LSLLAAFEYSYIVGVLASL----GMVLSAGYSIYL-----YNRVCFGAPSKYLYfsrDLNRREFYVLLPLVFLIYLMGIF 464
|
.
gi 313184041 479 P 479
Cdd:MTH00217 465 P 465
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
80-485 |
2.58e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 171.26 E-value: 2.58e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 80 LGIDGLSIGPILLTGFITTLATLAAW-PVTRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGK 158
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWhSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSR 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 159 K-RLYSATKFILYTAGSSVFLLLGVLGIGLYASNEPTLNFeTSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDT 237
Cdd:MTH00226 178 EeKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTL-ASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKA 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 238 HGEAHYSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFII 317
Cdd:MTH00226 257 HVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVS 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 318 IGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAE 397
Cdd:MTH00226 337 ITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGE 416
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 398 livFFGIITSQNFfliqKILITFVMAIGTILTPIYSLSMLRQMFYGykffnAPNSYFF---DSGPRELFISISIFLPVIG 474
Cdd:MTH00226 417 ---YLSILSSFNW----NPIIGVFVCSGVILSAVYSFYFANRVTFG-----APGNLITfarDVNRREFYITASMVFFAFL 484
|
410
....*....|.
gi 313184041 475 IGLYPDFVFSL 485
Cdd:MTH00226 485 IGIYPIFILEV 495
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
80-482 |
7.53e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 168.58 E-value: 7.53e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 80 LGIDGLSIGPILLT------GFITTLATLAAWPVTRdSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLIS 153
Cdd:MTH00206 55 LSYDPLSSPLVILScwllplMFLASQNHMKNEPINR-QRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLIT 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 154 VWGGKK-RLYSATKFILYTAGSSVFLLLGVLGIGLYASNEPTLNFETSANQSYpvaLEIIFYIGFLIAFAVKSPIIPFHT 232
Cdd:MTH00206 134 RWGNQKeRLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTW---NNNLWWLACILAFLVKLPLYGVHL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 233 WLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPwLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSH 312
Cdd:MTH00206 211 WLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYF-FIILGLWGSIMTSSICLRQTDLKSLIAYSSVSH 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 313 MGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMS 392
Cdd:MTH00206 290 MSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFP 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 393 GFVAELIVFFGIITSQNFFLiqkilitFVMAIGTILTPIYSLSMLRQMFYGYKFFNAPNSYFfdSGPRELFISISIFLPV 472
Cdd:MTH00206 370 NLFGELLIITSLFSWSNFTL-------PLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSP--SSTREHLLLFLHLFPV 440
|
410
....*....|
gi 313184041 473 IGIGLYPDFV 482
Cdd:MTH00206 441 ILLILNPNLI 450
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
80-494 |
1.83e-43 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 160.43 E-value: 1.83e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 80 LGIDGLSIGPILLTGFITTLATLAAWPVTRD-SRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGK 158
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYGEHrQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 159 KRLYSATKFILY-TAGSSVFLLLGVLGiglYASNEpTLNFETSANQSYPVA-LEIIFYIgFLIAFAVKSPIIPFHTWLPD 236
Cdd:PRK08375 153 RALAAARKYLIVgLIGSTFLLIGVGLL---YGVTG-TLNMADLAGALAENPtVVTAFGF-VLLALALKAAVFPLHTWLPR 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 237 THGEAHYSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPW---LMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHM 313
Cdd:PRK08375 228 AYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLgwlLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQM 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 314 GFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSG 393
Cdd:PRK08375 308 GYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSG 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 394 FVAELIVFFGIITsqnfflIQKILITFVMAIGTILTPIYSLSMLRQMFYGyKFFNAPNSYFFDSGPRELFISISIFLPVI 473
Cdd:PRK08375 388 FVSKWYLVVGAVE------AGQWLVLAVLLASSLLALLYFLRIWYRAFFG-PPPPGSEAPKQEAPLGMLAPSLALALLSL 460
|
410 420
....*....|....*....|.
gi 313184041 474 GIGLYPDFVFSLSVDKVETLI 494
Cdd:PRK08375 461 LLGIYAGPLLQLADAAAAGLL 481
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
131-413 |
1.03e-42 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 153.24 E-value: 1.03e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 131 SRDLLLFFIMWELELIPVYLLISVWGGKKRLYSAT-KFILYTAGSSVFLLLGVLGIGLYASnepTLNFETSANQSYPVAL 209
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGmKYFLLTLLGSSILLFGISLMYNYTG---TLSFDELSKALTGGLN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 210 EIIFYIGFL---IAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEFLPrAHSIFAPWLMIVGTI 286
Cdd:pfam00361 78 SSGLLLLFLlilVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLP-SSPFIQQILLILAII 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 287 QIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAG-TSYDRIRLVYLDEMG 365
Cdd:pfam00361 157 SMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGsVIYRRVHTRNIRDYG 236
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 313184041 366 GMAVPVPKIFTTFSILSMASLALPGMSGFVAELIVFFGIITSQNFFLI 413
Cdd:pfam00361 237 GLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLV 284
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
78-479 |
2.00e-40 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 151.28 E-value: 2.00e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 78 WRLGIDGLSIGPILLTGFITTLATLAAWPV-----TRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLI 152
Cdd:MTH00044 55 LSLATDSLSSPLIILSCWLAPLSLLASINHlsnnsPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILI 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 153 SVWGGKKRLYSA-TKFILYTAGSSVFLLLGVLGIGLYASNEPTLNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFH 231
Cdd:MTH00044 135 TRWGAQKERIQAgLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFH 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 232 TWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEF-LPRAHSI------FAPWLMIVGTIQIIYaasaspgQRNLKKR 304
Cdd:MTH00044 215 LWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFsLPSANNIsfilivFCCWGALITSIICLR-------QTDLKAL 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 305 IAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMA 384
Cdd:MTH00044 288 IAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAA 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 385 SLALPGMSGFVAELIVFFGIItSQNFFLIqkilitFVMAIGTILTPIYSLSMLrQMFYGYKFFNApNSYFFDSGPRELFI 464
Cdd:MTH00044 368 NLGLPPLPNLIGELLIISSII-SWSILSF------PIIGLATVFGAIYSLLIY-QLTNSGSFPSW-ISNVSPISSREHLL 438
|
410
....*....|....*
gi 313184041 465 SISIFLPVIGIGLYP 479
Cdd:MTH00044 439 IFLHLLPLILIIINP 453
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
80-486 |
4.24e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 149.60 E-value: 4.24e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 80 LGIDGLSIGPILLTGFITTLATLAAWP---VTRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWG 156
Cdd:MTH00150 20 FSVDSMSSLLISLSLWISGLMMLASQKsvkLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLILGWG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 157 GK-KRLYSATKFILYTAGSSVFLLLGVLGIGLYASnepTLNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLP 235
Cdd:MTH00150 100 YQpERLQAGMYMMLYTVGASLPLLLVILWMSSSYG---SSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLP 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 236 DTHGEAHYSTCMLLAGILLKMGAYGLVRINM--EFLPRAHSIFapwLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHM 313
Cdd:MTH00150 177 KAHVEAPVAGSMILAGILLKLGGYGILRMMMvfSLSSSSFSIF---LISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHM 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 314 GFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRI--RLVYLdeMGGMAVPVPKIFTTFSILSMASLALPGM 391
Cdd:MTH00150 254 SLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVhsRSLFL--SKGMLMLYPSLSLWWFLFCIINMAAPPS 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 392 SGFVAELIVFFGIITSQNFFLIqkilitfVMAIGTILTPIYSLSMLRQMFYG-YKFFNAPnsyFFDSGPRELFISISIFL 470
Cdd:MTH00150 332 LNLLSEIMIFPSLISYSPWFFV-------PLGLMVFLSGLYSLYLYTSIQHGgSSSFLKP---FNELKSSEMLLLLLHWV 401
|
410
....*....|....*.
gi 313184041 471 PVIGIGLYPDFVFSLS 486
Cdd:MTH00150 402 PLLLLILKSDLLFMWI 417
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
80-437 |
9.99e-39 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 146.64 E-value: 9.99e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 80 LGIDGLSIGPILLTGFITTLATLA------AWPVTRdSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLIS 153
Cdd:MTH00127 57 MATDPLSTPLLVLTCWLLPLMILAsqnhtaPEPINR-QRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIIT 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 154 VWGGKK-RLYSATKFILYTAGSSVFLLLGVLGIGLYASNEPTLNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHT 232
Cdd:MTH00127 136 RWGNQTeRLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 233 WLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWlMIVGTIQIIYAASASPGQRNLKKRIAYSSVSH 312
Cdd:MTH00127 216 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPF-IILALWGIIMTGSICLRQTDLKSLIAYSSVSH 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 313 MGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMS 392
Cdd:MTH00127 295 MGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLP 374
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 313184041 393 GFVAELIvffgIITSQNFFLIQKILITfvmAIGTILTPIYSLSML 437
Cdd:MTH00127 375 NLMGELM----IITSLFNWSPWTLALT---GLGTLITAGYSLYMF 412
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
80-437 |
1.85e-38 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 145.83 E-value: 1.85e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRdSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLIS 153
Cdd:MTH00068 56 FGIDQISSPLLILTCWLLPLMILASQnhlknePINR-QRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIIT 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 154 VWGGKK-RLYSATKFILYT-AGSSVFLLLGVLGIGLYASNEPTLnFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFH 231
Cdd:MTH00068 135 RWGNQEeRLNAGTYFLFYTlAGSLPLLIALLILQNSLGSLSLIL-LELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLH 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 232 TWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPwLMIVGTIQIIYAASASPGQRNLKKRIAYSSVS 311
Cdd:MTH00068 214 LWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYP-FIILALWGVLMTSLICLRQTDLKSLIAYSSVS 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 312 HMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGM 391
Cdd:MTH00068 293 HMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPS 372
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 313184041 392 SGFVAELIVFFGIITSQNFFLIqkilitfVMAIGTILTPIYSLSML 437
Cdd:MTH00068 373 PNLWGELTIMVSLFNWSNWTIL-------ITGLGTLITAAYTLYMF 411
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
95-437 |
7.03e-38 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 144.18 E-value: 7.03e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 95 FITTLATLAAwpvtrdsrlfhFLMLAmysgqiglFSSRDLLLFFIMWELELIPVYLLISVWGG-KKRLYSATKFILYTAG 173
Cdd:MTH00124 95 FLTTLILLQT-----------FLILA--------FSATELTLFYIMFEATLIPTLILITRWGNqPERLSAGTYFLFYTLI 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 174 SSVFLLLGVLGIGLYASNEPTLNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGIL 253
Cdd:MTH00124 156 SSLPLLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAIL 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 254 LKMGAYGLVRINMEFLPRAHSIFAPwLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFL 333
Cdd:MTH00124 236 LKLGGYGIIRITLLLPPLSNTLHYP-FLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMI 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 334 QIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPkIFTTFSIL-SMASLALPGMSGFVAELIvffgIITSQNFFL 412
Cdd:MTH00124 315 LMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLP-LMTTWWLLaNLTNMALPPTINLMGELT----IMTSLFNWS 389
|
330 340
....*....|....*....|....*
gi 313184041 413 IQKILITfvmAIGTILTPIYSLSML 437
Cdd:MTH00124 390 PTTIILT---GLATLITASYTLYMF 411
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
68-483 |
1.78e-34 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 134.51 E-value: 1.78e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 68 YKWIDFFDFYWRLGIDGLSIGPILLTGFITTLATLAAWPVTRD---SRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELE 144
Cdd:MTH00163 40 SLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKnnySNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESS 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 145 LIPVYLLISVWGGK-KRLYSATKFILYTagsSVFLLLGVLGIGLYASNEPTLNFETSANQSYpvaLEIIFYIGFLIAFAV 223
Cdd:MTH00163 120 LIPTLFLILGWGYQpERLQAGIYLLFYT---LFASLPLLVGIFYLYNNSGSLSFFLLNFFGS---LNFLWYLSMILAFLV 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 224 KSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRInMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKK 303
Cdd:MTH00163 194 KMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRV-MSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKS 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 304 RIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGMAVPVPKIFTTFSIL 381
Cdd:MTH00163 273 LIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLgsRSLLINK--GLLNFMPSMSLWWFLL 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 382 SMASLALPGMSGFVAELIVFFGIITSQNFFLIQKILITFVMAigtiltpIYSLSMLRQMFYGYKFFNapNSYFFDSGPRE 461
Cdd:MTH00163 351 SSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSA-------AYSLYLYSYSQHGKYYSG--LYSCSSGKVRE 421
|
410 420
....*....|....*....|..
gi 313184041 462 LFISISIFLPVIGIGLYPDFVF 483
Cdd:MTH00163 422 YLLLFLHWLPLNLLILKSDLFM 443
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-424 |
7.91e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 133.94 E-value: 7.91e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 9 IVAVLPIFGGSLIFFLPHKGNKVIRLYTLFICIIELLLTTYAFYYYFQLDDPLMQLtedykwidFFDFYWRLGI----DG 84
Cdd:PRK12667 11 ILLVLFAFLLPLLSILLKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPIVYL--------FGGWPAPIGIvyevDL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 85 LSIGPILLTGFITTLATLAAWPVTRDSRL---FHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKR- 160
Cdd:PRK12667 83 LGALLGLLTALVMFLILIYSYWYLEHESGpewYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDa 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 161 LYSATKFILYTA-GSSVFLLLGVLGIGLYAsnepTLNF--------------ETSANQSYPVALEIIFYIgFLIAFAVKS 225
Cdd:PRK12667 163 VEAAIKYALIGAvGTTLYFLALAFLYATFG----TLNMadlsakirglsfplTGGLAGNPPLALGVALAL-ALWAFTIKA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 226 PIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRI------NMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQR 299
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgISPSLIDFRAALSPILIILGAVSAIIGALMMVVQK 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 300 NLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFS 379
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFL 397
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 313184041 380 ILSMASLALPGMSGFVAELIVFFGIITSQNFFLIQKILITFVMAI 424
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISL 442
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
80-443 |
4.50e-33 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 130.63 E-value: 4.50e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 80 LGIDGLSIGPILLTGFITTLATLAAWPV---TRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWG 156
Cdd:MTH00014 55 LSSDMLSAPLITLTLWITALMILASFKIfqnNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWG 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 157 GK-KRLYSATKFILYTAGSSVFLLLGVLGIGLYASNEPTLNFETSANQSYPVALEIIFYIGfliAFAVKSPIIPFHTWLP 235
Cdd:MTH00014 135 YQpERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSMEPPSIYLMNLWWLITIL---AFMVKMPLYTVHLWLP 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 236 DTHGEAHYSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPwLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGF 315
Cdd:MTH00014 212 KAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFMHINKSLSAP-FSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 316 IIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFV 395
Cdd:MTH00014 291 MTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLL 370
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 313184041 396 AELIVFFGIITSQNFFLIQKILITFvmaigtiLTPIYSLSMLRQMFYG 443
Cdd:MTH00014 371 SEIMLLTSILSSSLSTAILLAITSF-------LAAAYSLFLYTSTQHG 411
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
68-479 |
3.34e-31 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 125.48 E-value: 3.34e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 68 YKWIDFFDFYwrlgiDGLSIGPILLTGFITTLATLAAWPV---TRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELE 144
Cdd:MTH00205 46 TSFISSSFSF-----DSLSLPLIMLSFWISLLMVLASYKVfksNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEAS 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 145 LIPVYLLISVWGGK-KRLYSATKFILYTAGSSvFLLLGVLGIGLYASNEPTLNFETSANQSYPVALeiIFYIGFLIAFAV 223
Cdd:MTH00205 121 LIPTLILILGWGYQpERLQASMYMMMYTLCAS-LPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLF--LYWIFLMLAFLV 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 224 KSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRInMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKK 303
Cdd:MTH00205 198 KLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRI-TSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKS 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 304 RIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSM 383
Cdd:MTH00205 277 LIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLIS 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 384 ASLALPGMSGFVAELIVFFGIITSQNFFLIQKILITFVMAIGTILtpIYSLSMLRQMFYGYKFFNAPNSYFFdsgprelF 463
Cdd:MTH00205 357 CNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLY--LYSQSQHGKVSSQISSFLAISEREY-------Y 427
|
410
....*....|....*.
gi 313184041 464 ISISIFLPVIGIGLYP 479
Cdd:MTH00205 428 ILILHWFPLNILILKL 443
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
7-443 |
5.61e-31 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 126.65 E-value: 5.61e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 7 LTIVAVLPIFGGSLIFFLpHKGNKVIRLytlficIIELLLTTYAFYYYFQLDDPlmqlTEDYKWIDFFDFYWRLGIDGLS 86
Cdd:PRK08668 3 LTLLLLTPLIGSVLAYLL-KKINEKIGV------IGNALPLLFLIKLYFTLKVG----TGEKLTLFFGGFKLTFTLTHLS 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 87 ---IGPILLTGFITTLATLAAwpVTRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRLYS 163
Cdd:PRK08668 72 wffAMISLLVIFSVAFFMVSE--KTKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKKESRKAS 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 164 ATKFILYTAGSSVFLLLGVLGIGLYAsnepTLNFETSANQ-----SYPVALeiiFYIGFLIAFAV-KSPIIPFHTWLPDT 237
Cdd:PRK08668 150 LKYFVLSAIGAYAMLYAIFLIYAKTG----TFDFADISQGlindtSTGFAL---IVFLFLLAFGVaKAGIFPLHVWAPDA 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 238 HGEAHYSTCMLLAGILLKMGAYGLVrINMEFLP-----------RAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIA 306
Cdd:PRK08668 223 YSEAPQSFSAVLSGQLSKLGAYGFL-LVLYVLPgtklfsefgtyRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIA 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 307 YSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTT--FSILSMA 384
Cdd:PRK08668 302 YSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMylVAIISLA 381
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 313184041 385 slALPGMSGFVAELIVFFGIItSQNFFliqkiLITFVMAIGTILTPIYSLSMLRQMFYG 443
Cdd:PRK08668 382 --GIPPMSGFASKWLIFEALI-SKGMP-----ITAFMAFFGSIGSFLYVFRPLAGVFLG 432
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
129-437 |
9.31e-30 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 121.15 E-value: 9.31e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 129 FSSRDLLLFFIMWELELIPVYLLISVWGGK-KRLYSATKFILYT-AGSsvflLLGVLGIGLYASNEPTLNFETSANQSYP 206
Cdd:MTH00110 110 FTATELIMFYILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTlVGS----LPLLVALLYIQNNLGSLNFLLLQLWAQP 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 207 VALE---IIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIv 283
Cdd:MTH00110 186 LPNSwsnNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPFLML- 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 284 GTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRI--RLVYL 361
Cdd:MTH00110 265 SLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIhsRTMIL 344
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 313184041 362 DEmgGMAVPVPKIFTTFSILSMASLALPGMSGFVAELIVFFGIITSQNFFLIqkilitfVMAIGTILTPIYSLSML 437
Cdd:MTH00110 345 AR--GLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITII-------LMGLNMLITALYSLYML 411
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
7-429 |
8.14e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 112.74 E-value: 8.14e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 7 LTIV-AVLPIFGGSLIFFLPhkgnKVIRLYTLFICIIELLlttYAFYYYFQLDDPLMQLTEDYKWIdffdfywrLGIDGL 85
Cdd:PRK07234 4 LTPVwIALPFLLGFAIYLLP----KLDRNLALGMAIVSAV---YALGLVASMVPLELTLLDNFGVT--------LRADAL 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 86 SIGPILLTGFITTLATLAAWPvTRDSRLFHFLmLAMYSGQIGL-FSSRDLLLFFIMWELELIPVYLLISVWGGKKRLYSA 164
Cdd:PRK07234 69 SGYFILTNALVTLAVIFYCWE-SAKTRFFYAQ-LLILHGSVNAaFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVG 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 165 TKFILYTAGSSVFLLLGVLGIglYASNEpTLNFeTSANQSYPVALEIIFyIGFLiafaVKSPIIPFHTWLPDTHGEAHYS 244
Cdd:PRK07234 147 LRYLFYSNVAMLFYLIGAVLV--YQANG-TFAF-SGLATADPEAFALIA-LGLL----VKGGIFVSGLWLPLTHSEAEPP 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 245 TCMLLAGILLKMGAYGLVRINMeflprAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGigsls 324
Cdd:PRK07234 218 VSALLSGVVVKAGVFPLVRCAL-----DVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAA----- 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 325 dmGLNGAFLQiISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMaslalPGMSGFVAELIVFFGI 404
Cdd:PRK07234 288 --PLVGGLYA-LAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPLTMASFSIAGF-----PLLAGFVSKVLTLKNL 359
|
410 420
....*....|....*....|....*
gi 313184041 405 ITsqnfflIQKILItFVMAIGTILT 429
Cdd:PRK07234 360 LP------WQAIAL-NLAAVGTAAS 377
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
6-485 |
5.43e-25 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 107.51 E-value: 5.43e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 6 WLTIVAVLPIFggsLIFFLPHKGNKVIRlytlFICIIELLLTTYAFYYYFQLDDPlmqltedykwIDFFDFYWrlgIDGL 85
Cdd:COG1007 12 ILLLGALVLLL---LDLFLPRRSRRLLA----GLALLGLLLALALLLLALGGGTG----------TAFGGMFV---VDGF 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 86 SIGPILLTGFITTLATLAAWPVTRDSRLFHF----LMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKR- 160
Cdd:COG1007 72 ALFFKLLILLAALLVLLLSRDYLERRGLLRGefyaLLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRs 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 161 LYSATKFILYTAGSSVFLLLGVLGIGLYASnepTLNFETSANQ-SYPVALEIIFYIGF---LIAFAVKSPIIPFHTWLPD 236
Cdd:COG1007 152 SEAALKYFLLGALSSGFLLYGISLLYGATG---SLNLAGIAAAlAAGGANSPLLLLGLvlvLAGLAFKLSAVPFHMWTPD 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 237 THGEAHYSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFI 316
Cdd:COG1007 229 VYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 317 IIGIGSLSDMGLNGAFLQIISHGFIGAALF-FLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILsMASLA-LPGMSGF 394
Cdd:COG1007 309 LLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIF-LLSLAgIPPTAGF 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 395 VAELIVFFGIITSQNFFLiqkiliTFVMAIGTILTPIYSLSMLRQMfygykFFNAPNSYFFDSGPRELFISISIF-LPVI 473
Cdd:COG1007 388 FGKFYVFSAAVEAGLYWL------AVIAVLNSVISAYYYLRVVKAM-----YFDEPEEEAPISAPPGLRVALVIAaLLVL 456
|
490
....*....|..
gi 313184041 474 GIGLYPDFVFSL 485
Cdd:COG1007 457 LLGIFPGPLLDL 468
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
17-398 |
2.58e-23 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 102.53 E-value: 2.58e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 17 GGSLIFFLPHKGNKVIRLYTLFICIIELLLTTYAFYYYFQLDDPlmqltedykwiDFFDFYWRLGIDGLSIGPILLTGFI 96
Cdd:PRK08676 7 LVALLFLRLGLLSRSHRLLNALALGHGLWHLGLSLWVLLVLPLP-----------GYFMESRYLFIDHLGIFVVLIASVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 97 TTLATLAAWPVT-----------RDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRLYSAT 165
Cdd:PRK08676 76 FILAALYARGYVdhllsngeldpENLKVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAAL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 166 KFILYTAGSSVFL---LLGVLGIGLYASNEPTLNFETSANQS--YPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGE 240
Cdd:PRK08676 156 KYIFIASTAMIFAfigLIFLFSLTRQALGTGTLNWTELAAHAslLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAK 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 241 AHYSTCMLLAGILLKMGAYGLVRIN-MEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIG 319
Cdd:PRK08676 236 APSVVSALLSGTVLNIGIYGILRLSaLLRQSGAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLG 315
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 313184041 320 IGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAEL 398
Cdd:PRK08676 316 IGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKF 394
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-482 |
3.69e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 102.48 E-value: 3.69e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 1 MNYFPWLTIVAVLPIFGGSLIFFLPHKGNKVIRLYTLFICIIELLLTTYAFY---------YYFQLDDPLMQLTEDYKwi 71
Cdd:PRK08376 1 VLGEHLPPLLIIIPLFGAFSMPIVSLLGGKAREIWAVLISFLTLIVALLVFYevwnngtivYVLGAESPTLTLPFGSG-- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 72 dFFDFYWRLGIDGLSIGPILLTGFITTLATLAAWP-VTRDSRL--FHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPV 148
Cdd:PRK08376 79 -GFPIRIIWEVDLFGAFMALIATIVSFLAVLYSISyMKHDTGLdkYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIAS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 149 YLLISVWGGK-KRLYSATKF-ILYTAGSSVFLLLGVLGIGLYasNEPTLNFETSANQSYPVALEIIFYIGFLIAFAVKSP 226
Cdd:PRK08376 158 YALVAFRNDTwEAIEAGIKYmFVGSLASSMVLLGIALLYGQY--GTLNMAYLAVKMSENPTVVAKIALALFIAGLAMKSG 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 227 IIPFHTWLPDTHGEAHYS-TCMLLagILLKMGAYGLVRINME-FLPRAHSIFAPWLMIV-GTIQIIYAASASPGQRNLKK 303
Cdd:PRK08376 236 AVPVHMWLPDAYPAAPSSiSAMLL--VIKQAGLYALARVLFSiYGPAINLATVGWVIIIlGCLTMFVGVAMAVVQKDVKR 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 304 RIAYSSVSHMGFIIIGIG------------SLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPV 371
Cdd:PRK08376 314 LLAYHSVSQIGYMLLGLGvglaalgdpamaSYGEIALAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTM 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 372 PKIFTTFSILSMASLALPGMSGFVAELIVFfgiitsQNFFLIQKILITFVMaIGTILTPIYSLSMLRQMFYGYKffnAPN 451
Cdd:PRK08376 394 PKTTIAFLIGAAAIVGLPPFNGFASKWLIY------ESSALFNPILGVIAM-IGSVLTLASFVKVFHTAFFGPP---SEK 463
|
490 500 510
....*....|....*....|....*....|..
gi 313184041 452 SYFFDSGPRELFISISIF-LPVIGIGLYPDFV 482
Cdd:PRK08376 464 VMNVKEPPKPMLVPMLILaIAIIGMGLFPWQI 495
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
114-493 |
2.74e-22 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 99.64 E-value: 2.74e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 114 FHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRLYSATKF-ILYTAGSSVFLLLGVLGIGLYAsne 192
Cdd:PRK12663 110 FPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQEREQLRGAIKYvVLNLIGSWLFLLGIGLLYGTFG--- 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 193 pTLNF---ETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHtWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEFL 269
Cdd:PRK12663 187 -TLNMahiAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLF 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 270 PRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLA 349
Cdd:PRK12663 265 PQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIA 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 350 GTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAELIVFFGIITSQNFFLIQKILITFVMAIgtilt 429
Cdd:PRK12663 345 GSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITM----- 419
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 313184041 430 piysLSMLRQMFYGYKFFNAPNSYFFDSGPRELFISISIF-LPVIGIGLYPDFVFSLSVDKVETL 493
Cdd:PRK12663 420 ----YSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILaVVVIAMGIAAEPLLNLTQDAAEGL 480
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
12-493 |
3.21e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 96.56 E-value: 3.21e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 12 VLPIFGGSLIFFLPhKGNKVIRLYTLFICIIELLLTTYAFYYYFQlDDPLMqltedykwIDFFDFYWRLGI----DGLSI 87
Cdd:PRK07691 11 LIPVITAILLIFLG-KRPIIQRYVALIGSLLTLVAAIILVANVYK-HGIQT--------LELGNWKAPFGIvfvaDMFAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 88 GPILLTGFITTLATLAAWP---VTRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRLYSA 164
Cdd:PRK07691 81 LLVLTSSIITFLVILYSFQtigIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRES 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 165 TKFILYTAGSSVFLLLGVLGIGlyaSNEPTLNF--------ETSANQSypvALEIIFYIGFLIAFAVKSPIIPFHTWLPD 236
Cdd:PRK07691 161 IKYVLINVVSSAFFVVAVAILY---SVVGTLNMadisvkiaELSAGQT---GLITVVAILFLFVFATKAGLFPLYFWLPG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 237 THGEAHYSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFI 316
Cdd:PRK07691 235 SYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVI 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 317 IIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSIlSMASLA-LPGMSGFV 395
Cdd:PRK07691 315 LVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFI-AALSLAgIPPLSGFY 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 396 AELIVFFGIITSQNFFLIQKILITFVMAIgtiltpiysLSMLRQMFYGykFFNAPNSYFFDSGP---RELFISISIFLPV 472
Cdd:PRK07691 394 GKFFIVEGTFEAGFYVSGIIVLLSSLLVL---------YSVIKIFLKG--FWGEPKGYDLNNKVpvkKLLLPAVVLVAIT 462
|
490 500
....*....|....*....|.
gi 313184041 473 IGIGLYPDFVFSLSVDKVETL 493
Cdd:PRK07691 463 ILYGLGAEPLYPYVKQAAETL 483
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
68-442 |
4.57e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 96.04 E-value: 4.57e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 68 YKWIDFFDFYWRLGIDGLSIGPILLTGFITTLATLAAW------PVTRDSRLFHFLMLAMYSGQIGLFSSrDLLLFFIMW 141
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPkylainNIDSSSRFLFFFNLTILIGVLIALSS-DLFTMFVCY 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 142 ELELIPVYLLISVWGGKKRLYSATKFILYTAGSSVFLLLGVLGIGLYASNepTLNFETSA----NQSYPVALEIIFYIGf 217
Cdd:PRK06589 146 ELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTG--NLDFVSGGlfskNQSIILLLMFIYGIA- 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 218 liafavKSPIIPFHTWLPdTHGEAHYSTCMLL-AGILLKMGAYGLVRINMEF--LPRAHSIFA--PWLMIVGTIQIIYAA 292
Cdd:PRK06589 223 ------KTAIFPVHSWLP-AAMVAHYPVSALLhAVIVVKTGLFCIYKILLYIfgLSYLQRIFAefNWLIFIPIVSIFYSS 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 293 SASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVP 372
Cdd:PRK06589 296 LKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFP 375
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 373 KIFTTFSILSMASLALPGMSGFVAELIVFFGIITSQNFFLiqKILITFVMAIGTILTPIYSLSMLRQMFY 442
Cdd:PRK06589 376 LISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWL--SIIVMLVVIASSILSALYLLKILSSIYK 443
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
6-443 |
4.99e-21 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 96.37 E-value: 4.99e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 6 WLTIVAVLPIFGGSLIFFLPHK-GNKVIRLYTLFICIIELLLTTYAFYYYFQLDdplmQLTEDYKWIDF--FDFYWRLGI 82
Cdd:COG1009 3 LLWLIPLLPLLGALLAGLLGRRlGRRAAGWLAALAPLAAFVLSLLLFPAVLGGE----VVVELYTWIPVgsLGLDFGFRL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 83 DGLSIGPILLTGFITTLATL-AAWPVTRDSRL--FHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKK 159
Cdd:COG1009 79 DGLSLLMLLLVTGVGLLVHIySIGYMSGDPGLarFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKP 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 160 R-LYSATKFILYTAGSSVFLLLGVLGIGLYASnepTLNF-ETSANQSYPVALEIIFYIGFLIAFAV--KSPIIPFHTWLP 235
Cdd:COG1009 159 SaRRAARKAFLVTRVGDLGLLLGILLLGAIAG---TLNFsELLAAAPTILSSPLLTLILLLLLLGAfgKSAQFPLHFWLP 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 236 DTHgEA--------HYSTcMLLAGILLkmgaygLVRIN--MEFLPRAHSIfapwLMIVGTIQIIYAASASPGQRNLKKRI 305
Cdd:COG1009 236 DAM-EGptpvsallHAAT-MVKAGVYL------LARLSplFALSPVWLTV----VAIIGAITALFAALIALAQTDIKRVL 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 306 AYSSVSHMGFIIIGIGSlsdMGLNGAFLQIISHGFIGAALFFLAG----TSYDRirlvYLDEMGGMAVPVPKIFTTFSI- 380
Cdd:COG1009 304 AYSTVSQLGYMFLALGV---GAYVAALFHLLTHAFFKALLFLGAGsvihATGTR----DIRKMGGLRKKMPITAITFLIg 376
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 313184041 381 -LSMAslALPGMSGFVAELIVFFGIITSQNFfliqKILITFVMAIGTILTPIYSLSMLRQMFYG 443
Cdd:COG1009 377 aLSLA--GIPPFAGFFSKEAILEAALEAGGL----GPLLLAVALLGAFLTAFYSFRLFFLVFFG 434
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
11-443 |
6.66e-21 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 95.43 E-value: 6.66e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 11 AVLPIFGGSLIFFLPHKGNKVIRLYTLFICIIELLLTTYAFYYYFQlDDPLMQLTEDYKWIDFfdfywRLGIDGLS--IG 88
Cdd:PRK06525 8 LLLPFIGALVVFFLPGRRAAELGVLFAALTTLCMLSLAYAFYQAGK-VAVTLTLVNLGDVALF-----GLVIDPVSvlIG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 89 -PILLTGFITTLATL-------AAWPVTRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKR 160
Cdd:PRK06525 82 fVVVLLGLLVTLYSTgymspgnREHPVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 161 LYSATKFILYTAGSSVFLLLGVLGIGLYasnepTLNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGE 240
Cdd:PRK06525 162 LRSALKALLITHIGSLGLYLAAATLFLQ-----TGTFALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 241 AHYSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFapWLM-IVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIG 319
Cdd:PRK06525 237 PTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIG--YVGaVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 320 IGSL---SDMGLNGAFLQIISHGFIGAALFFLAGTsydrirLVY------LDEMGGMAVPVPKIFTTFSILSMASLALPG 390
Cdd:PRK06525 315 LSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGA------LSYscgtrlLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 313184041 391 MSGFVAELIVFF-GIITSQNFFLIqkILITFVMAIGTILTPIYSLSMLRQMFYG 443
Cdd:PRK06525 389 FNGFFSKFPIFAaGFELSVEYWIL--LPAMVLLLIESVASFAWFLRWFGRVVFG 440
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
82-485 |
3.65e-20 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 92.96 E-value: 3.65e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 82 IDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAMYS--GQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKK 159
Cdd:PRK05777 71 VDGFALFLKGLILLASLLALLLARPYLEDRGRGEFYLLVLFAllGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRR 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 160 R-LYSATKFILYTAGSSVFLLLGVLGIGLYASnepTLNFETSA---NQSYPVALEIIFYIGFLIA-FAVKSPIIPFHTWL 234
Cdd:PRK05777 151 RsLEAAIKYFVLGALASGFLLYGMSLLYGATG---SLSFAGIAkalADGSGNSLLLLFGLVFLLVgLAFKLSAVPFHMWT 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 235 PDTHGEAHYSTCMLLAGILlKMGAYG-LVRINMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHM 313
Cdd:PRK05777 228 PDVYEGAPTPVTAFLATAP-KIAAFAvLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 314 GFIIIGIGSLSDMGLNGAFLQIISHGFIGAALF-FLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILsMASLA-LPGM 391
Cdd:PRK05777 307 GYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFgVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIF-MLSLAgIPPT 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 392 SGFVAELIVFFGIITSQNFFLiqkiliTFVMAIGTILTPIYSLSMLRQMFygykFFNAPNSYFFDSGPRELFISISIF-L 470
Cdd:PRK05777 386 AGFWGKFYVFEAAVEAGLWWL------AVIGVLNSAIGAFYYLRVIKLMY----FDEPPRDAPVNWPLSAGGAVLSVSaL 455
|
410
....*....|....*
gi 313184041 471 PVIGIGLYPDFVFSL 485
Cdd:PRK05777 456 LVLVLGIFPQPLLDL 470
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
1-397 |
5.71e-19 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 89.95 E-value: 5.71e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 1 MNYFPWLTIVAVLPIFGGSLIFFLPHKGNKVIRLYTLFICIIELLLTTYAFYYYFQLDDPLMQLTEDYKWIDFfdfywRL 80
Cdd:PRK06521 2 MLALQLLLLSLLLYLALGLAGLLLLRRPRLAIRLSGPTGLLGGLLGLASGLTALFAGPTLAAVLPLGLPFLPF-----HL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 81 GIDGLSIGPILLTGFITTLATLAAWPVTRDS-----RLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVW 155
Cdd:PRK06521 77 RLDALSAFFLLVISLLGAAASLYSLGYFREYegkgpGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIAN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 156 GGKKRLYSATkfILYTAGSSVFLLLGVLGIGLYASNEPTLNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLP 235
Cdd:PRK06521 157 HREAEIRRAG--FLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLP 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 236 DTHGEA--HYSTcmLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIVGTIQ----IIYAASaspgQRNLKKRIAYSS 309
Cdd:PRK06521 235 RAHPAApsHVSA--LMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLALGAISavlgVLYALA----EHDLKRLLAYST 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 310 VSHMGFIIIGIG-----------SLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTF 378
Cdd:PRK06521 309 IENIGIIFVGLGlamvfiaygmpLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAF 388
|
410
....*....|....*....
gi 313184041 379 SILSMASLALPGMSGFVAE 397
Cdd:PRK06521 389 LIGCLAISALPPLNGFVSE 407
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
218-427 |
2.34e-18 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 87.68 E-value: 2.34e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 218 LIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIV-GTIQIIYAASASP 296
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIfGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 297 GQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFT 376
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 313184041 377 TFSILSMASLALPGMSGFVAELIVFFGIITSQNFFLIQKILITFVMAIGTI 427
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAAL 431
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
6-407 |
2.74e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 87.86 E-value: 2.74e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 6 WLTIVAVLpIFGGSLIFFLPHKGNKVIRLYTLFICIIELLLTTYAFYYYF--QLDDPLmqltedykWIDFFDFYWRLGID 83
Cdd:PRK08667 6 FLGAILLL-LAAAVIPLVFRHKRKRVWQSVLWLVIAIALLLFAGSLQLFTgnPLDIPL--------WGIAPGLDITFHID 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 84 GLSIGPILLTGFITtlATLAAWPVTRDSRLFHFLMLAMYSGQIGLF--------SSRDLLLFFIMWEL-ELIPVYLLISV 154
Cdd:PRK08667 77 RLAAFFIILIGLVS--LCVAIYSLGYNEHMSSNERANLLSALTALFilsmlgvvASANTFSFLFFWEImALSSFFLVMND 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 155 WGGKKRLYSATKFILYTAGSSVFLLLGVLGIGLYasnepTLNFETSANqSYPVALEIIFYIGFLIAFAVKSPIIPFHTWL 234
Cdd:PRK08667 155 YQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQ-----TGSFELSPL-GASAGILSLVFLLLFLGFGIKAGIIPFHKWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 235 PDTHGEAHYSTCMLLAGILLKMGAYGLVRINMeflprahSIFAPWL----------MIVGTIQIIYAASaspgQRNLKKR 304
Cdd:PRK08667 229 PYAHPASPSNVSALMSGVMLKVAVYGLVRFLM-------DVLSPELwwgvlillagSISALLGVIYALK----EHDLKGL 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 305 IAYSSVSHMGFIIIGIG-----------SLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPK 373
Cdd:PRK08667 298 LAYSSIENIGIILMGIGlyvifgvygldTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPY 377
|
410 420 430
....*....|....*....|....*....|....
gi 313184041 374 IFTTFSILSMASLALPGMSGFVAELIVFFGIITS 407
Cdd:PRK08667 378 TSALFLVGAVSIAALPPFNGFASELLLYESFFQS 411
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
13-486 |
1.30e-17 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 85.20 E-value: 1.30e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 13 LPIFGGSLIFFLPHKGNKVIRLYTLFICIIELLLTTYAFYYYFQLDDPLMQLTEDYKWidffdfywRLGIDgLSIGP--- 89
Cdd:PRK08377 11 LPLISAFFVPVIKGIGKSAVRYYLILITLLQTGIAGWVFMEVYTTGKPIIIMAGGWKP--------PVGIN-LYIGPfaa 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 90 -----ILLTGFITTLATLAAW---PVTRDSRLFHFLMLamysGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRL 161
Cdd:PRK08377 82 lfvliIAIVSFIMSIFSLKAVevePIDKYAMLFLLLML----GATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 162 YSATKFILYTAGSSVFLLLGVLGIGLYASNEPTLNFETSANQSYPVALEIIFYIGFLiAFAVKSPIIPFHTWLPDTHGEA 241
Cdd:PRK08377 158 EASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTIDPTVAQVGLALLIF-GLAVEAELFPLNAWAPDAYQAA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 242 HYSTCMLLAGILLKMGAYGLVRI-NMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGI 320
Cdd:PRK08377 237 PHPITVMFSAFVVKAGLYAMARIlYLMQNANGWSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALAL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 321 GSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAELIV 400
Cdd:PRK08377 317 ALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRI 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 401 FFGIITSQNFFLIQKILitfvmaIGTILTPIYSLSMLRQMfygykFFNAPNSYFFDSGPRELFIsISIFLPVIGIGLYPD 480
Cdd:PRK08377 397 ILAGLSAGYTWPVALVL------GASVVEAVYYFRLIHTM-----WFKGEGERIRENAAIGIIL-LLLAALIVVIGIYPT 464
|
....*.
gi 313184041 481 FVFSLS 486
Cdd:PRK08377 465 PFWEVV 470
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
80-442 |
1.56e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 85.17 E-value: 1.56e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 80 LGIDGLSIGPILLTGFITTLATL-AAWPVTRDSRL-----FHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLIS 153
Cdd:PRK12662 72 LRVDILSATMLVLVNFIAVMSVLyGIYPNRKEISVnkipsFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVA 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 154 VWGGKKRLYSATKF-ILYTAGSSVFLLLGVLGiglYASNEpTLNFETSANQSYPVALEIIFYIGFLIAF---AVKSPIIP 229
Cdd:PRK12662 152 MGRDKKALVAAFEYlIIGTIGATFYLIGIGFL---YAITG-TLNMGDMFLIIQDLPTNRAIQIGVLFIMvglFIKAALFP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 230 FHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRI-------NMEFLPRAHSIFapwLMIVGTIQIIYAASASPGQRNLK 302
Cdd:PRK12662 228 FHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkaNFVFTTLPFNNV---FMILAALAIVFGSVLAILSKDIK 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 303 KRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILS 382
Cdd:PRK12662 305 RIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLS 384
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 383 MASLALPGMSGFVAELIVFFGIITSQNFFLIqkilitFVMAIGTILTPIYSLSMLRQMFY 442
Cdd:PRK12662 385 LSLIGMPPTSGFVAKWYILDAFIKSNAWIGL------VVLLVGSGLSVIYVWKIVEALYF 438
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
114-401 |
1.70e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 85.02 E-value: 1.70e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 114 FH--FLMLAMysGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRLYSATKFILYTAGSSVflLLGVLGIGLYASN 191
Cdd:PRK12665 113 FLptYLILVA--GVSNAFLAGDLFNLYVGFEILLVASYVLLTLGATAARVRAGVTYVMVSMVSSL--LFLIGIALVYAAT 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 192 EpTLNFETSAN--QSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEFL 269
Cdd:PRK12665 189 G-TLNMADLAVrlDELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLF 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 270 PrAHSIFAPwLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLA 349
Cdd:PRK12665 268 P-GGGLDTL-LMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVV 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 313184041 350 GTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAELIVF 401
Cdd:PRK12665 346 GLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALL 397
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
29-443 |
2.17e-17 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 85.19 E-value: 2.17e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 29 NKVIRLYTLFICIIELLLTTYAFYYYFQLDDPLMQLTEDYKWIDFFDFYWRLGIDGLSIGPILLTGFITTLATLAA---W 105
Cdd:PRK12646 23 RRALAKYAGYIALVAPIISSIYFLIQIPSVAKLQYLSTSIPWMKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYAtqyL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 106 PVTRDS--RLFHFLMLAMYSgQIGLFSSRDLLLFFIMWELELIPVYLLISVW--GGKKRLYSATKFILYTAGSSVFLLLG 181
Cdd:PRK12646 103 SSRKDNlpRFYFYLTLFMFS-MIGIVLSDNTILMYVFWELTSVSSFLLISYWynNGDSQFGAIQSFMITVFGGLALLVGF 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 182 VLGIGLYASNEPTlNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGL 261
Cdd:PRK12646 182 IMLYIMTGTNNIT-EILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLL 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 262 VRinmeFLP--RAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIG--------------SLSD 325
Cdd:PRK12646 261 FR----FTPllGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGigggyaqhqqdaiaSIYV 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 326 MGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAELIVFFGII 405
Cdd:PRK12646 337 FVLFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALT 416
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 313184041 406 TSQN---FFLIQKILITFVMAIGTILTPIYSLSMLRQMFYG 443
Cdd:PRK12646 417 QTGQlsqFSLISMIIIVFIGVIASIFTFTYALYMVKEVFWG 457
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
64-434 |
3.10e-17 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 85.09 E-value: 3.10e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 64 LTEDYKWIDFF-----DFYWRLGIDGLSIGPILLTGFI--TTLATLAAW-PVTRDSRLFHFLMLAMYSGQIGLFSSRDLL 135
Cdd:PRK12650 54 LTWSVTWIPDLlgngvDVNLALRADALSLFFALLALVIgaVVFIYSARYlPRKKGNTSFYLLMTAFMAAMLLLVLADDVV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 136 LFFIMWELELIPVYLLISVWGGKKRLySATKFILYTAGSSVFLLLGvlgiglyasneptlnFETSANQSYPVALEIIFY- 214
Cdd:PRK12650 134 VLFVAWELVSLASFFLIARSGSGGEA-GSIRTLILTFFGGLTLLAA---------------VAIAATQTGTTSLSGILHs 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 215 ------------IGFLIAFAV--KSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRinmeFLPRAHSIfAPW- 279
Cdd:PRK12650 198 dvwaekpglttvVAVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLR----FSPVFHDV-AVWn 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 280 --LMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGT------ 351
Cdd:PRK12650 273 wlLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVvdhqag 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 352 SYDRIRLVYLDemggMAVPVPKIFTTFSILSMAslALPGMSGFVAE--LIVFFGIITSQNFFLiqkILITFVMAIGTILT 429
Cdd:PRK12650 353 TRDIRRLGSLW----RRMPFTFVSVTIAALSMA--AVPPLFGFVSKegMLTAFLEAPGGNAGV---VLLLVGAALGAVFT 423
|
....*
gi 313184041 430 PIYSL 434
Cdd:PRK12650 424 FAYSA 428
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
11-396 |
2.52e-16 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 81.48 E-value: 2.52e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 11 AVLPIFGGSLIFFLPHKGNKVIRLYTLFICIIELLLTTYAFYYYFQlddplmqltedykwidFFDFYWRLG-IDGLSIGP 89
Cdd:PRK12668 9 ALVFIAGALLVPFLPGRARKALLLLAPVLAVLAVLTVPEGTYLTVT----------------FLGFDLVLGrVDKLSRVF 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 90 ILLTGFITTLATLAAWPVTRDSRlfHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRLYSATKFIL 169
Cdd:PRK12668 73 GLIFGIMAFIGVIYALHVKDPGQ--HVAALLYVGSALGAVFAGDLLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 170 YTAGSSVFLLLGVLGiglYASNEPTLNFETSANQSYPVALEIifyigfLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLL 249
Cdd:PRK12668 151 VHVLGGVLLLAGILL---HYAETGSFAFGAIAGLGGTAAWLI------LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 250 AGILLKMGAYGLVRinmeflprahsIFA--PWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMG 327
Cdd:PRK12668 222 SAFTTKTAVYALAR-----------AFPgtELLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALA 290
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 313184041 328 LNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVA 396
Cdd:PRK12668 291 INGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVS 359
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
7-443 |
1.40e-15 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 79.51 E-value: 1.40e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 7 LTIVAVLPIFGGSLI-FFLPHKGNKVIRLYTLFICIIeLLLTTYAFYYYFQLDDPLMqltEDYKWIDFFDFYWRLGIDGL 85
Cdd:TIGR00940 1 LHSAFILPPFAASLIpILYPSDQRIHIGWFVLAIPLV-CFLYTLGLYPYTASGGVLH---YTIDWVPELGLNFTLYMDGL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 86 S-IGPILLTGFITTLATLAAWPVTRDSRL--FHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGK-KRL 161
Cdd:TIGR00940 77 AlLFSLLITGIGVLVVLYSIYYLSKEEPLpnFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRaHSR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 162 YSATKFILYT--AGSSVFLLLGVLGIGLYASNEPTLNFETSANQSYPVALEIIFYIgfLIAFAVKSPIIPFHTWLPDTHG 239
Cdd:TIGR00940 157 YGAQKSLTITvfGGLAMLGGLILLGKITGSFSIDAVIASADAIRNSPLFGTAMVLV--LLGAFTKSAQFPFHIWLPDAME 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 240 EAHYSTCMLLAGILLKMGAYGLVRINMEFlprAHSIFAPWLM-IVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFI-- 316
Cdd:TIGR00940 235 APTPVSAYLHSATMVKAGLYLLARFTPVF---AGTEAWFWIVgLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLImv 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 317 IIGIGSLS-----------DMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMAS 385
Cdd:TIGR00940 312 LLGLGSPSyhyqgddskiyALAAVAAVFHLINHATFKGSLFMAAGIIDHETGTRDIRKLGGLFHIMPITFTLAMIASAAM 391
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 313184041 386 LALPGMSGFVAELIVFFGIITSQNFFLIQ----KILITFVMAIGTILTPIYSLSMLRQMFYG 443
Cdd:TIGR00940 392 AGVPPFNGFLSKEMFFAEAITAHLVNPFDtvtlGYLFPYVATVASVFTFVYSLRFIHGVFFG 453
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
114-483 |
1.87e-14 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 75.37 E-value: 1.87e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 114 FHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKR-LYSATKFILYTAGSSVFLLLGVLGIGLYASne 192
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFsTEAGLKYFILGAFSSGLLLFGISLIYGFTG-- 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 193 pTLNFETSANQSYPVALEIIFY----IGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEF 268
Cdd:TIGR01770 182 -SLNFEDLLLFLSNGMLNISLLllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYI 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 269 LPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALF-- 346
Cdd:TIGR01770 261 LFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgv 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 347 FLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAELIVFFGIITSQNFFLIqkilitFVMAIGT 426
Cdd:TIGR01770 341 LSLLRSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLA------VIAVLTS 414
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 427 ILTPIYSLSMLRQMfygykFFNAPNSYFFDSGPRE---LFISISIFLpVIGIGLYPDFVF 483
Cdd:TIGR01770 415 VIGAFYYLRVVKVM-----YFDKPERRIPSNPQSKaqsLLLSISALF-ILFLGLFPSLIL 468
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
111-481 |
7.70e-14 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 74.09 E-value: 7.70e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 111 SRLFHFLMLAMYSgQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGK-KRLYSATKFILYTAGSSVFLLLGVLGIGLYa 189
Cdd:PRK12649 111 PRYYQYLLLFMGS-MIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRpESVYGATKSLLITAGGGLFMFAGFLLLHVI- 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 190 snepTLNFETSANQSYPVALE--------IIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGL 261
Cdd:PRK12649 189 ----TGTYDIATILQDSELIEnikghplfLITLILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLV 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 262 VRInmeflpraHSIFA---PWLMIV---GTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLS----DMGLNGA 331
Cdd:PRK12649 265 ARI--------HPIFSgteAWFILVsgtGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTyhepGLGVAAA 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 332 FLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVA-ELIVFFGIITSQNF 410
Cdd:PRK12649 337 TFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSkEMFYETSVEMGALI 416
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 313184041 411 FLIQKILITFVMAIGTILTPIYSLSMLRQMFYGYKFFNAPNSYFFDSGPRELFISISIFLPVIGIGLYPDF 481
Cdd:PRK12649 417 GGPFTIIIPAVAVLGGVFTFAYSIKLIDGIFLGERTHDHLPHHIHEAPYVMLIPAAFLAGLVILFGLVPSI 487
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
218-450 |
1.30e-13 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 73.32 E-value: 1.30e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 218 LIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMeflprAHSIFAPW----LMIVGTIQIIYAAS 293
Cdd:PRK08042 187 VIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSL-----LGGNAPLWwgvaLLVLGMITAFVGGL 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 294 ASPGQRNLKKRIAYSSVSHMGFIIIGIGS-----------LSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLD 362
Cdd:PRK08042 262 YALMEHNIQRLLAYHTLENIGIILLGLGAgvtgialeqpaLIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIE 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 363 EMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAELIVF--FGIITSQNFFLIQkiLITFVMAIGTILTPIYSLsMLRQM 440
Cdd:PRK08042 342 KLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYqsFFKLSNSGAFVAR--LLGPLLAVGLAITGALAV-MCMAK 418
|
250
....*....|
gi 313184041 441 FYGYKFFNAP 450
Cdd:PRK08042 419 VYGVTFLGAP 428
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
129-455 |
1.54e-13 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 72.25 E-value: 1.54e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 129 FSSRDLLLFFIMWELELIPVYLLISVWGGKKRLYSATKFILYTAGSSVFLLLGVLGIGLYASNEPTLNFETSanqsypva 208
Cdd:MTH00094 79 FVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLS-------- 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 209 leIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRInMEFLPRAHSIFapwLMIVGTIQI 288
Cdd:MTH00094 151 --WEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI-LGSLNFVYNNF---WIIFSLLGM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 289 IYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSY--DRIRLVYLdeMGG 366
Cdd:MTH00094 225 ILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYhiSKSRLIYF--MNS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 367 MAVPVPKIFTTFSILSMASLALPGMSGFVAELIVFfgiitsQNFFLIQKILITFVMAIGtILTPIYSLSMLRQMFYGYKF 446
Cdd:MTH00094 303 FFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLII------SNSFMKNKFSFFFIFFYF-LVSFYYSLFLIVSSFMGKKF 375
|
....*....
gi 313184041 447 FNAPNSYFF 455
Cdd:MTH00094 376 SNFNNFNVG 384
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
39-401 |
1.71e-12 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 69.60 E-value: 1.71e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 39 ICIIELLLTTYAFYYYFQLDDPLMQLtEDYKWIDFFDFYWRLGI--DGLSIGPILLTGFITTLATLAAWPVTRDS----- 111
Cdd:MTH00032 34 ICMGSSTLIALFLAYEVLINDAVVHI-ELYKWIESEIFITHIGLlyDTLSVTMLLVISSISTLVHIYSTSYMSDDphvpr 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 112 -----RLFHFLMLAmysgqigLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRL-YSATKFILYTAGSSVFLLLGVLGI 185
Cdd:MTH00032 113 flcylSLFTFLMMV-------LVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQAnKAAIKAIVVNRVGDVGVILGMVLI 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 186 GLYASNEPTLNFETSANQS--------------YPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAG 251
Cdd:MTH00032 186 YKTIGSLDFLTFNGGSVGSgimdrgyygggayeSPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAA 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 252 ILLKMGAYGLVRINMEFLPRAHSIFApwLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGF--IIIGIGSLSDMGLn 329
Cdd:MTH00032 266 TMVTAGVFLMIRSFPLFEKAPLTLLI--ITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYmvLIIGIEGSHNVGL- 342
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 313184041 330 gafLQIISHGFIGAALFFLAGTSYDRIRLVYLD--EMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAELIVF 401
Cdd:MTH00032 343 ---FHLVNHAFFKALLFLSAGSVIHSTTVDEQDmrKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
63-434 |
4.31e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 68.80 E-value: 4.31e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 63 QLTEDYKWIDFFDFYWRLGIDGLSIGPILLTGFITTLATL--AAWPVTRDSRLFHF--LMLAMYSGQIGLFSSRDLLLFF 138
Cdd:PRK12644 53 APTEVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLycARYFDDDEPRLGRFaaELVAFAGAMFGLVTSDNLLLLY 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 139 IMWELELIPVYLLISVWGGKK--RLYSATKFILYTAGS---SVFLLLGVLGIGLYASNEPTLNFETSANQSYPVALeiif 213
Cdd:PRK12644 133 VFWELTTVLSFLLIGHYAERAasRRAALQALLVTTAGGlamLVGIIILGQAAGTYRLSELLADPPTGPAVSVAVVL---- 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 214 yigFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEFlprAHSifAPWLMIV---GTIQIIY 290
Cdd:PRK12644 209 ---ILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGF---ADV--PVWRPTVlvlGLATMLL 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 291 AASASPGQRNLKKRIAYSSVSHMGFII--IGIGSlSDMGLNGAFLqIISHGFIGAALFFL-------AGTSyDRIRLVYL 361
Cdd:PRK12644 281 GGWRALRQHDLKLILAYGTVSQLGFLTvlVGIGT-RDAALAGLAM-LLAHALFKAALFLVvgiidhsTGTR-DIRKLSGL 357
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 313184041 362 demgGMAVPVPKIFTTFSILSMAslALPGMSGFVAELIVFFGIITSQNFFLIQKILITfVMAIGTILTPIYSL 434
Cdd:PRK12644 358 ----GRRQPVLAVVAALAAASMA--GLPPLLGFVAKEAALEAVLHDGALGPAGPVVLA-GIVLGSILTVAYSL 423
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
128-448 |
1.23e-10 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 63.82 E-value: 1.23e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 128 LFSSRDLLLFFIMWELELIPVYLLISVWGGKKRLYSA--TKFILYTAGSSVFLLLGVLGIGLYASNEPTLNFETSANQSy 205
Cdd:MTH00211 126 LVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAalQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFILNLDLT- 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 206 pvaleiIFYIGFLIAFAVKSPIIPFHTWLPDTHgEA--------HYSTcMLLAGILLKMGAYGLVRINMEFLPrahsifa 277
Cdd:MTH00211 205 ------LFLLGLLLAAMGKSAQFGFHPWLPSAM-EGptpvsallHSST-MVVAGVFLLIRLSPLFQNNQLILG------- 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 278 pWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIG-SLSDMglngAFLQIISHGFIGAALFFLAG----TS 352
Cdd:MTH00211 270 -AVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGlNQPQL----AFLHICTHAFFKAMLFMCSGsiihGL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 353 YDR--IRlvyldEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVA-ELIVFFGIITSQNFFLIqkilitFVMAIGTILT 429
Cdd:MTH00211 345 NNEqdIR-----KMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSkDLILESMNGSYLNAWAL------LLTLLATSLT 413
|
330
....*....|....*....
gi 313184041 430 PIYSLSMLRQMFYGYKFFN 448
Cdd:MTH00211 414 AAYSFRLIFLSLGGYPRFL 432
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
218-401 |
1.69e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 63.33 E-value: 1.69e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 218 LIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAgILLKMGAYGLVRINME-FLPRA---HSIFAPWLMIVGTIQIIYAAS 293
Cdd:PRK12666 217 LVVFLIKAAMWPLNFWLPPAYAAASAPVAALFA-IMTKVGIYAILRLSTLlFGPEAgasAGFGQDWLLPGGLATLAFGAI 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 294 ASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLA-------GTSYDRI---RLVYLDE 363
Cdd:PRK12666 296 GVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLAdlverqrGAAADRLavtPELYDLD 375
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 313184041 364 MGGMAVPVPKIFTTFSILSMASLA-------LPGMSGFVAELIVF 401
Cdd:PRK12666 376 EEEEEEVGVAIPATMALLGLLFFIcalalagLPPLSGFLGKFALL 420
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
5-443 |
3.05e-10 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 62.64 E-value: 3.05e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 5 PWLTIVAVLPIFGGSLIFFLpHKGNKVIRLyTLFICIIELLLttyaFYYYFQLDDPLMQ---LTEDYKWIDFFDFYWRLG 81
Cdd:PRK12645 2 SLLHIAILLPFIFALLIPFL-YKYFKRIHT-GWFVLPVPVVL----FIYFLSLIPTTMSgntVMKTLPWIPSLGINFTLY 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 82 IDGLSIGPILLTGFITTLATLAA--WPVTRDSRLFHF---LMLAMySGQIGLFSSRDLLLFFIMWELELIPVYLLISVWG 156
Cdd:PRK12645 76 VDGLSLLFALLITGIGSLVVLYSiyYLSKKKEQLGNFyvyLLLFM-GAMLGVVLSDNLIVLYLFWELTSISSFLLISYWY 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 157 GKKR-LYSATKFILYTagssVF--------LLLGVLGIGLYASNEPTLNFETSANQSYPVALEIIFYIGfliAFaVKSPI 227
Cdd:PRK12645 155 EREAsRYGAQKSMLIT----VFgglsmlggFILLYIMTGSFSIREMIANADEIQNSPLFIPAMILILLG---AF-TKSAQ 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 228 IPFHTWLPD-----THGEAH-YSTCMLLAGILLkmgayglvrinmefLPRAHSIFAP-----WL-MIVGTIQIIYAASAS 295
Cdd:PRK12645 227 FPFYIWLPDameapTPVSAYlHSATMVKAGIYL--------------VARFTPIFAGsqvwfWTvTLVGLITLFWGSLNA 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 296 PGQRNLKKRIAYSSVSHMGFII--IGIGSLS-----------DMGLNGAFLQIISHGFIGAALFFLAG-----TSYDRIR 357
Cdd:PRK12645 293 VKQTDLKGILAFSTVSQLGLIMslLGIGAASlhyqgddskiyAAAITAAIFHLINHATFKGSLFMIVGivdheTGTRDIR 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 358 lvyldEMGGMAVPVPKIFT--TFSILSMAslALPGMSGFVAELIVFFGI--ITSQNFFLIQK--ILITFVMAIGTILTPI 431
Cdd:PRK12645 373 -----KLGGLMTIMPITFTiaLIGALSMA--GLPPFNGFLSKEMFFESMlnATEANLFSLDTwgVLFPVIAWVASVFTFV 445
|
490
....*....|..
gi 313184041 432 YSLSMLRQMFYG 443
Cdd:PRK12645 446 YSIIFIFKTFFG 457
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
45-399 |
5.84e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 61.86 E-value: 5.84e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 45 LLTTYAFYYYFQLDDPLMQ---LTEDYKWIDFFDFYWRLGIDGLSIGPILLTGFITTLATLAAWPVTRD----SRLFHFL 117
Cdd:PRK12647 22 LLPLALFLYFLSFIPEIAAgetVRGGYAWVPSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGhpdlGRFYSYI 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 118 MLAMYSgQIGLFSSRDLLLFFIMWELELIPVYLLIS-----------------VWGGKKRLYSATKFILYTAGSSvflll 180
Cdd:PRK12647 102 LLFMAS-MLGLVLSDNLITLFVFWELTSITSFLLIGfnhereaarraalqallVTGGGGLALLAGLILLGNVTGT----- 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 181 gVLGIGLYASNEptlnfETSANQSYPVALeIIFYIGfliAFAvKSPIIPFHTWLPD-----THGEAH-YSTCMLLAGIll 254
Cdd:PRK12647 176 -YSLSELLASGD-----VIREHPLYLAIL-LLVLGG---AFT-KSAQFPFHFWLPNameapTPVSAYlHSATMVKAGI-- 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 255 kmgaYGLVRINMEFlprahSIFAPW---LMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGA 331
Cdd:PRK12647 243 ----YLLARLNPVL-----GGTPLWqtiLPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAA 313
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 313184041 332 FLQIISHGFIGAALFFLAGT------SYDRIRLvyldemGGMAVPVPKIFTTFSILSMASLALPGMSGFVA-ELI 399
Cdd:PRK12647 314 VLFLVAHSLYKGALFMVAGIidhetgTRDITKL------GGLRRAMPITAAAALLAALSMAGLPPLFGFLAkELI 382
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
128-452 |
1.49e-09 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 60.37 E-value: 1.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 128 LFSSRDLLLFFIMWELELIPVYLLISVWGGKKRL-YSATKFILYT-AGSSVFLLLGVLGIGLYasNEPTLNFETSANQSY 205
Cdd:MTH00208 154 LTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDAnSSALQAVIYNrIGDIGIILFLSLSLINF--NSWNLNEILSLNNSN 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 206 PvALEIIFYIGFLIAFAVKSPIIPFHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLVRINMEFLPraHSIFAP 278
Cdd:MTH00208 232 S-FLINILLFGILLAAAGKSAQFGLHPWLPAamegpTPVSAllHSST-MVVAGVFL------LIRTSPLISN--SPWFLS 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 279 WLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIgslsdmGLNG---AFLQIISHGFIGAALFFLAGTsydr 355
Cdd:MTH00208 302 LCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAI------GLNQpnlALFHICTHAFFKAMLFLCSGS---- 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 356 IRLVYLDE-----MGGMAVPVPkifTTFSILSMASLAL---PGMSGFVA-ELIVFFGIITSQNFFLIqkilitFVMAIGT 426
Cdd:MTH00208 372 IIHSLNNEqdlrkMGGLSFLLP---VTSSCIILGSLALmgtPFLAGFYSkDLILEAGLASISNLLSI------ILALIAT 442
|
330 340
....*....|....*....|....*.
gi 313184041 427 ILTPIYSLSMLRqmfygYKFFNAPNS 452
Cdd:MTH00208 443 LLTAVYSFRIIF-----FCFLNNPSF 463
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
8-441 |
1.94e-09 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 60.09 E-value: 1.94e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 8 TIVAVLPIFGGSLI-FFLPHKGNKVIRLYTLFICIIELLLTTYAFYyyfqldDPLMQLTEDY----KWID--FFDFYWRL 80
Cdd:MTH00020 3 LLVLFLPLLGALLSgLFGRKIGEKGAGILTSSCLIISLSWSFLIFY------EILFNSSTTYiklwRWLDsdLLTVYFGL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 81 GIDGLSIGPILLTGFITTLATLAAWPVTRDS----------RLFHFLMLAmysgqigLFSSRDLLLFFIMWELELIPVYL 150
Cdd:MTH00020 77 QFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDphiprfmsylSLFTFLMVV-------LVTSDNYLQLFIGWEGVGLCSYL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 151 LISVWGGKKRL-YSATKFILYT-AGSSVFLLLGVLGIGLYASneptLNFETSANQSYPVALEIIFYIGFLIAFAV--KSP 226
Cdd:MTH00020 150 LINFWLTRIEAnKAAIKAMLVNrVGDIGLLLAMFLLWDRFGS----LDFSSVFNMVVSAPSSDITLICLFLFIGAvgKSA 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 227 IIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRIN--MEFLPRAHSIfapwLMIVGTIQIIYAASASPGQRNLKKR 304
Cdd:MTH00020 226 QLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSplFEQAPLALII----VTIVGSLTVFFAATVGLVQNDLKKV 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 305 IAYSSVSHMGFIIIGIG-SLSDMGLngafLQIISHGFIGAALFFLAGTsydrIRLVYLDE-----MGGMAVPVPKIFTTF 378
Cdd:MTH00020 302 IAYSTCSQLGYMVVACGlSHYSISL----FHLMNHAFFKALLFLSAGS----VIHALSDEqdmrkMGGLISFLPLTYIFF 373
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 313184041 379 SILSMASLALPGMSGFVA-ELIVFFgiiTSQNFFLiqkILITFVMAIGTILTPIYSLSMLRQMF 441
Cdd:MTH00020 374 LIGSLSLMGFPYLTGFYSkDLILEL---AFGQYYL---IFAYWLGCFSALLTAFYSIRLIYLTF 431
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
189-436 |
5.39e-08 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 55.17 E-value: 5.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 189 ASNEPTLNF-ETSANQSYPvaleIIFYIGFLIAFAVKSPIIPFHTWLPD-----THGEA--HYSTcMLLAGILLkmgayg 260
Cdd:MTH00004 190 AMTLNTWEIqQLFSPTQTP----TLPLLGLILAATGKSAQFGLHPWLPAamegpTPVSAllHSST-MVVAGIFL------ 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 261 LVRIN--MEFLPRAHSIfapwLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIgslsdmGLNG---AFLQI 335
Cdd:MTH00004 259 LIRTHplLQNNQTALTI----CLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTI------GLNQpqlAFLHI 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 336 ISHGFIGAALFFLAGT-------SYDrIRlvyldEMGGMAVPVPkifTTFSILSMASLALPGM---SGFVAELIVFFGII 405
Cdd:MTH00004 329 STHAFFKAMLFLCSGSiihnlnnEQD-IR-----KMGGLQKTLP---ITSSCLTIGNLALMGTpflSGFYSKDTIIETLN 399
|
250 260 270
....*....|....*....|....*....|.
gi 313184041 406 TSqnfFLIQKILITFVMAigTILTPIYSLSM 436
Cdd:MTH00004 400 TS---YLNAWALLLTLLA--TSFTAAYSLRM 425
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
218-459 |
9.17e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 54.77 E-value: 9.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 218 LIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRinmeFLPRAHSI--FAPWLMIVGTIQIIYAASAS 295
Cdd:MTH00207 186 MIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIR----FYPFLSSTywFNPALLLTASLTMLMAGLSA 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 296 PGQRNLKKRIAYSSVSHMGFIIIGIGslsdMGL-NGAFLQIISHGFIGAALFFLAGTSydrIRLVY----LDEMGGMAVP 370
Cdd:MTH00207 262 MTECDMKKIIALSTLSQLGVMMASLG----LGMpKLALFHLITHALFKALLFVCAGSL---IHSHHhsqdLRTMGNLTNQ 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 371 VPKIFTTFSILSMASLALPGMSGFVAELIvffgIITSQNFFLIQKILITFVMaIGTILTPIYSLSMLRQMFYGyKFFNAP 450
Cdd:MTH00207 335 MPLTTSCLLIANLALCGSPFLSGFYSKDL----ILESSLFYPHNSLMILMIF-LATALTAAYSTRFTLAVLWS-PNSSSP 408
|
....*....
gi 313184041 451 NSYFFDSGP 459
Cdd:MTH00207 409 YHHLEDEDK 417
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
116-483 |
1.70e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 53.05 E-value: 1.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 116 FLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRLYSATK-FILYTAGSSVFLLLGvlgiglyasnepT 194
Cdd:MTH00200 8 LFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKyFIIQATASALLLFGG------------L 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 195 LNFETSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGIllkmGAYGLVRINMEFLPRAHS 274
Cdd:MTH00200 76 LNAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTW----QKLAPFALLIQLAPALNS 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 275 IFapwLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYD 354
Cdd:MTH00200 152 NI---LLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKIN 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 355 RIRlvyldeMGGMAVPVPKIFTTFSILSMAslALPGMSGFvaelivFFGIITSQNFFLIQKILITFVMAIGTILtpiySL 434
Cdd:MTH00200 229 SLS------SSKTKNPILSMLLGLTLLSLG--GLPPLTGF------FPKWLILQELSKQGLFIYATILLLGSLL----SL 290
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 313184041 435 SMLRQMFYGYKFFNAPNSYFFDSGPRE-----LFISISIFLPVIGIGLYPDFVF 483
Cdd:MTH00200 291 FFYLRLSYLTLLTLSPNQINMMSSWRTksnsnLLVGLLLLLSILGLPLTPQLLF 344
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
112-394 |
2.67e-07 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 53.10 E-value: 2.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 112 RLFHFLMLaMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRLYSATK--FILYTAGSsvFLLLGVLGIGLYA 189
Cdd:PRK07376 123 RFFAYLSL-FSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQkaFVVNRVGD--FGLLLGILGLFWA 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 190 SNepTLNFETSANQ--------SYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPD-----THGEA--HYSTcMLLAGILL 254
Cdd:PRK07376 200 TG--SFDFDGIADRlselvssgAVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGVFL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 255 KMGAYGLvrinMEFLPRAHSIFApwlmIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGslsdMGLNGAFL- 333
Cdd:PRK07376 277 VARMYPV----FEQFPAVMTVIA----WTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMG----CGAYSAGLf 344
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 334 QIISHGFIGAALFFLAGTSYDRIRLVYLDE---------MGGMAVPVPKIFTTFSILSMASLALPGMSGF 394
Cdd:PRK07376 345 HLMTHAYFKAMLFLGSGSVIHGMEEVVGHDpvlaqdmrlMGGLRKYMPITAITFLIGCLAISGIPPFAGF 414
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
124-425 |
8.79e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 51.18 E-value: 8.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 124 GQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKkrLYSATK----FILYTAGSSVFLLLGVLGIGLYASNE-PTLNFE 198
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGS--GYSAEAglkyFVLGALSSGLFLFGCALLCGTTGGLHlSYINLV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 199 TSANQSYPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAgILLKMGAYG-LVRINMEFLprahsifa 277
Cdd:MTH00196 83 LNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLGIFSiLVSIGLNVN-------- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 278 pWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIR 357
Cdd:MTH00196 154 -ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIILALNVYKN 232
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 313184041 358 LvyLDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAELIVFFGIITSQNFFLIQKILITFVMAIG 425
Cdd:MTH00196 233 L--IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGV 298
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
211-447 |
9.19e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 51.08 E-value: 9.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 211 IIFYIGFLIaFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIVGTIQIIY 290
Cdd:MTH00062 166 IVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLIT 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 291 AASASPGQRNLkkriAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRI--RLVYLDEMGGMA 368
Cdd:MTH00062 245 ACSELDGKRWL----AFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSgsRNWVLLKSGING 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 369 VPVPKIFTTFSILSMASlaLPGMSGFVAELIVFFGIITSQNFFLIQKILITF-----VMAIGTILTPIYSLSMLRQMFYG 443
Cdd:MTH00062 321 SLVLRVIVVFSFLSLCS--FPPTIQFFCEVFLVSSSFGVLVYLLFWCFYLFFgglvpLILLGHLLIRSESYESINVSNYS 398
|
....
gi 313184041 444 YKFF 447
Cdd:MTH00062 399 YLFF 402
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
90-323 |
9.61e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 51.33 E-value: 9.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 90 ILLTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWggKKRLYSATKFIL 169
Cdd:PRK06459 50 SIISTIVWILASLYSIEYDHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT--KKNKRPAFVFMA 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 170 YTAGSSVFLLLGVLGIGlYASNEPTLNFETSanqsyPVALeIIFYIGFLIafavKSPIIPFH--TWLPDTHGEAHYSTCM 247
Cdd:PRK06459 128 FGELSTVLILAGFAWAF-IISGTTNFSYLPS-----PVPL-ILASFGFII----KMGMMPFLvsEWLPIAHGNAPSNFSA 196
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 313184041 248 LLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSL 323
Cdd:PRK06459 197 ILSATMTLMGVYGILKMTILTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLY 272
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-400 |
1.61e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 50.50 E-value: 1.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 95 FITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRL-----YSATKFI- 168
Cdd:PRK12664 46 FSLALIFLYILPIKNMRFSEMLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIgafihYACVHFFs 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 169 --LYTAGSSVFlllgvlgiglyasneptlnfetSANQSYPVALEIIFYIGFLIAFAVkspiIPFHTWLPDTHGEAHYSTC 246
Cdd:PRK12664 126 gvLLLVGASGQ----------------------AQNGQYTGYCKLLFMLGLLINCAC----FPASSWVVDAYPAASNFGI 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 247 MLLAGILLKMGAYGLVRINMEflprahsifAPWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIG--SLS 324
Cdd:PRK12664 180 IVLSLFTTKVAALVLLLFFSG---------EEILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGfsGSS 250
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 313184041 325 DMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGM-AVPVPKIFTTFSILSMAslALPGMSGFVAELIV 400
Cdd:PRK12664 251 GVAIGILILQIVLSVVYQTLLFMVADSVINRTRKFNLNRVGGLfKMSLEAMCCIIAILNMG--AFPGTAGFVSKSLI 325
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
205-443 |
1.68e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 50.96 E-value: 1.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 205 YPVALEIIfyigfLIAFAVKSPIIPFHTWLPdtHGEA---------HYSTcMLLAGILLkmgayglvrinmefLPRAHSI 275
Cdd:PRK12648 206 YPPALVLI-----LLGAFTKSAQFPFHFWLP--HAMAaptpvsaylHSAT-MVKAGVFL--------------LARLWPV 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 276 FA---PWLMIVGT---IQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLA 349
Cdd:PRK12648 264 LAgteEWFWIVGGaglITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAA 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 350 GT------SYDRIRLvyldemGGMAVPVPkIFTTFSILSMASLA-LPGMSGFVA-ELivFFGIITSQNFFLIQKILITFV 421
Cdd:PRK12648 344 GIidhetgTRDMRRL------SGLRRLMP-ITATLAMVAAAAMAgVPLLNGFLSkEM--FFAETLDTHLLGSLDWLLPVA 414
|
250 260
....*....|....*....|..
gi 313184041 422 MAIGTILTPIYSLSMLRQMFYG 443
Cdd:PRK12648 415 ATLAGAFSVAYSLRFIHDVFFG 436
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
210-394 |
4.04e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 49.52 E-value: 4.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 210 EIIFYIGFLIAFAVKSPIIPFHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLVRIN--MEFLPRAHSIfapwL 280
Cdd:MTH00066 206 STLPLLGLILAAAGKSAQFGLHPWLPAamegpTPVSAllHSST-MVVAGIFL------LIRFHplLENNQTALTI----C 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 281 MIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIgslsdmGLNG---AFLQIISHGFIGAALFFLAGT------ 351
Cdd:MTH00066 275 LCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTI------GLNQpqlAFFHICTHAFFKAMLFLCSGSiihsln 348
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 313184041 352 SYDRIRLvyldeMGGMAVPVPkifTTFSILSMASLALPGM---SGF 394
Cdd:MTH00066 349 DEQDIRK-----MGGLQKALP---ITTSCLTIGSLALTGTpflAGF 386
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
209-454 |
8.45e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 48.49 E-value: 8.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 209 LEIIFYIGFLIAFA--VKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEFLprAHSIFAPWLMIVGTI 286
Cdd:MTH00209 171 SNLGSVISVLIVLAamTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLF--SSPFFSMSLLLLGSL 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 287 QIIYAASASPGQRNLKKRIAYSSVSHMGFIIIgigSLSDMGLNGAFLQIISHGFIGAALFFLAGTS-YDRIRLVYLDEMG 365
Cdd:MTH00209 249 TTLMASMSANVESDLKKIIALSTLSQLGLMMC---SLGLNQPELAFFHLITHALFKALLFICAGNIiHSHGHSQDIRMVG 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 366 GMAVPVPKIFTTFSILSMASLALPGMSGFVAElivffGIITSQNFFLIQKILITFVMAIGTILTPIYSLSMLRQMFYGYK 445
Cdd:MTH00209 326 NLWYQMPITSICLNIANLSLCGIPFLAGFYSK-----DLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPN 400
|
....*....
gi 313184041 446 FFNAPNSYF 454
Cdd:MTH00209 401 SSKSLNSSF 409
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
219-423 |
9.41e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 48.09 E-value: 9.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 219 IAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAgILLKMGAYG-LVRINMEflprahsifAPWLMIVGTIQIIYAASASPG 297
Cdd:MTH00199 198 ISLLFKLSAAPFHMWAPDVYEGAPTITTALLA-TVPKIGVFSiLVQIGPV---------TNVVLICAVLSIIYGAIGALN 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 298 QRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSydRIRLVYLDEMGGMAVPVPKIFTT 377
Cdd:MTH00199 268 QTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIMSICSFSIILSL--KLTKGLIVEVSGLSRKNPVIALT 345
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 313184041 378 FSILSMASLALPGMSGFVAELIVFFGIITSQNFFLIQKILITFVMA 423
Cdd:MTH00199 346 LALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIA 391
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-394 |
9.76e-06 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 48.23 E-value: 9.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 1 MNYFpWLTIVAVLpifGGSLI--FFLPHKGNKVIRLYTLFICIIELLLTTYAFYYYFQLDDPLMQLTEdYKWIDF--FDF 76
Cdd:PRK06590 2 MNLL-WLIVLLPL---IGALIlgLFGRRIGEKWAHLVGTGLVGLSALLSLVVFFDFLLGGGRAFSQTL-WTWISVgdFDV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 77 YWRLGIDGLSIGPILLTGFITTLATLAAWPVTRD----SRLFHFLML---AMysgqIGLFSSRDLLLFFIMWELELIPVY 149
Cdd:PRK06590 77 DFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHdegyRRFFAYLNLftfSM----LMLVLSDNLLQLFFGWEGVGLCSY 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 150 LLISVWGGKKRLYSATK--FILYTAGSsVFLLLGVLGIGLYASnepTLNFET---SANQSYPVALEIIFYIGFL--IAFA 222
Cdd:PRK06590 153 LLIGFWYKKPSAGAAAMkaFIVNRVGD-VGLALGIFLLFAEFG---SLNYDEvfaAAPQFFGLGWSALTLICLLlfIGAM 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 223 VKSPIIPFHTWLPD-----THGEA--HYSTcMLLAGILLkmgayglvrinmefLPRAHSIF--AP----WLMIVGTIQII 289
Cdd:PRK06590 229 GKSAQFPLHTWLPDamegpTPVSAliHAAT-MVTAGVYL--------------VARMSPLFelSPeallFVAIVGAVTAL 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 290 YAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSlsdMGLNGAFLQIISHGFIGAALFFLAGTsydrIRLVYLDE-----M 364
Cdd:PRK06590 294 FAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGV---GAYAAAIFHLMTHAFFKALLFLGAGS----VIHAMHHEqdirkM 366
|
410 420 430
....*....|....*....|....*....|
gi 313184041 365 GGMAVPVPKIFTTFSILSMASLALPGMSGF 394
Cdd:PRK06590 367 GGLRKKMPVTYATFLIGTLALIGIPPFAGF 396
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
113-394 |
3.59e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 46.54 E-value: 3.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 113 LFHFLMlamysgqIGLFSSRDLLLFFIMWELELIPVYLLISVWGGK-KRLYSATKFILYT-AGSSVFLLLGVLGIGLYAS 190
Cdd:MTH00210 119 LFTFLM-------IVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRiKANKAAIKAMLINrVGDIGLVLAMIMILKEFGT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 191 NEPTLNFETSANQSYPVALEIIFYIGFLIAFAvKSPIIPFHTWLPD-----THGEA--HYSTcMLLAGILLKMGAYGLvr 263
Cdd:MTH00210 192 LEFSTISSLLVTNINKESLTIICLLLFIGAVG-KSAQLGLHTWLPDamegpTPVSAliHAAT-MVTAGVFLIIRSGPL-- 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 264 inMEFLPRAHSIfapwLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLsdmGLNGAFLQIISHGFIGA 343
Cdd:MTH00210 268 --FEGSPLALTI----VTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGIS---NYSTSLFHLMNHAFFKA 338
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 313184041 344 ALFFLAGTSYDRIRlvylDE-----MGGMAVPVPKIFTTFSILSMASLALPGMSGF 394
Cdd:MTH00210 339 LLFLSAGSVIHAVS----DEqdmrkMGGLIKSIPFTYVMILIGSLSLMGFPYLTGF 390
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
213-457 |
8.05e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 44.88 E-value: 8.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 213 FYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGI-------LLKMGAYGLVRINMeflprahsifapwLMIVGT 285
Cdd:MTH00144 86 SMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWqkvaplfLLSNFLDLYWLAYL-------------LCVISV 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 286 IQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIgaaLFFLAGTSYDRirlvyldeMG 365
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFL---FFSLWSGDSGS--------MK 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 366 GMAVPVPKIFTTFSILSMA-SLA-LPGMSGFVAELIVFFGIITSqnffliQKILITFVMAIGTILTPIYSLSMLRQMF-Y 442
Cdd:MTH00144 222 DLGSLKPSYKTGLSIISLLlSLGgLPPFLGFCSKLLVLISSMES------SPLLLILLLLLGSLISLFFYLSVFFSSFlS 295
|
250
....*....|....*
gi 313184041 443 GYKFFNAPNSYFFDS 457
Cdd:MTH00144 296 SSKSKKSNSSKVLNS 310
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
114-424 |
9.52e-05 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 45.04 E-value: 9.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 114 FHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLIsvwGGKKR----LYSATKFILYTAGSSVFLLLGVLGIGLYA 189
Cdd:PRK02504 112 FAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLT---GYMKRdprsNEAALKYLLIGAASSAIFLYGSSLLYGLS 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 190 SNEPTLN---FETSANQSYPVALEIIFYIGfLIAFavKSPIIPFHTWLPD------THGEAHYSTCMLLAG----ILLKM 256
Cdd:PRK02504 189 GGSTQLSaiaLALITSPSLGLALALVFVIA-GIAF--KISAVPFHQWTPDvyegspTPVVAFLSVGSKAAGfalaIRLLV 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 257 GAYGLVRINMEFLPRAHSIFApwlMIVGTIQIIyaasaspGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQII 336
Cdd:PRK02504 266 TAFPSFDEQWKLLFTALAILS---MVLGNVVAL-------AQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMVFYLL 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 337 SH------GFIGAALFFLAgTSYDRIrlvylDEMGGMAVPVPKIFTTFSILSMASLALPGMSGFVAELIVFFGIITSQNF 410
Cdd:PRK02504 336 AYlfmnlgAFACVILFSLR-TGTDQI-----SDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLY 409
|
330
....*....|....
gi 313184041 411 FLIQKILITFVMAI 424
Cdd:PRK02504 410 LLVLVGLVTSVISI 423
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
214-338 |
1.76e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 44.08 E-value: 1.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 214 YIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAgILLKMGAYGLVRinmeflprAHSIFAPWLMIVGTIQIIYAAS 293
Cdd:MTH00198 302 YLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIA-IIPKFTVYILLT--------SLVITSKLLLSVAIISLVVGAF 372
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 313184041 294 ASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISH 338
Cdd:MTH00198 373 GALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTY 417
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
212-399 |
1.81e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 43.87 E-value: 1.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 212 IFYIGFL---IAFAVKSPIIPFHTWLPDTHGEAH-YSTCMLLAGILLKMGAYGLVRINMEFLPRAHSIFAPWLMIVGTIQ 287
Cdd:PRK06277 197 VIYGGLLlliFGLLYGSGLPPFHTIKSDIYAKAKpFGSALLQTFSKFVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLA 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 288 IIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGM 367
Cdd:PRK06277 277 MVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGL 356
|
170 180 190
....*....|....*....|....*....|....
gi 313184041 368 --AVPVPKIFTTFSILSMAslALPGMSGFVAELI 399
Cdd:PRK06277 357 lpVMPVVAFMVLCAKLAIS--GVPPFNGFQSKLM 388
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
215-394 |
1.96e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 44.07 E-value: 1.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 215 IGFLIAFAVKSPIIPFHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLVRIN--MEFLPRAHSIfapwLMIVGT 285
Cdd:MTH00108 214 MGLLLAATGKSAQFGLHPWLPSamegpTPVSAllHSST-MVVAGVFL------LIRFHplMENNKTIQTL----TLCLGA 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 286 IQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGslsdmgLNG---AFLQIISHGFIGAALFFLAGT------SYDRI 356
Cdd:MTH00108 283 ITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIG------INQphlAFLHICTHAFFKAMLFMCSGSiihnlnDEQDI 356
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 313184041 357 RlvyldEMGGMAVPVPkiFTTfSILSMASLALPGM---SGF 394
Cdd:MTH00108 357 R-----KMGGLFKTLP--FTS-TALIIGSLALTGMpflTGF 389
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
210-485 |
2.50e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 43.68 E-value: 2.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 210 EIIFYIGFLIAFA--VKSPIIPFHTWLPdthgEA-----------HYSTcMLLAGILLkmgaygLVRINMeFLPRAHSiF 276
Cdd:MTH00151 173 KLSGWLGLLLVLAamTKSAQIPFSSWLP----AAmaaptpvsalvHSST-LVTAGVFL------LIRFFP-FLSSSSG-F 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 277 APWLMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGslsdMGLNG-AFLQIISHGFIGAALFFLAG----- 350
Cdd:MTH00151 240 SSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLG----LGMPSlALFHLYTHALFKALLFLCAGsiihs 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 351 -TSYDRIRLvyldeMGGMAVPVPKIFTTFSILSMASLALPGMSGFVA-ELIVFFGIITSQNFFLIqkilitFVMAIGTIL 428
Cdd:MTH00151 316 sSGTQDIRL-----LGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSkDLILESSLMSPTSLLMV------LLMFVGVGL 384
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 313184041 429 TPIYSlsmLRQMFYGYKFFNAPNSYFFdSGPRELFISISIFLPVIGIGLYPDFVFSL 485
Cdd:MTH00151 385 TALYS---ARLSFCLVWGSMKSSSLSS-KSDEDFYVSLPMLLLSLGALIGGKLLQSL 437
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
205-436 |
2.52e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 43.12 E-value: 2.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 205 YPVALEIIFYIGFLIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAgILLKMGAYGLVRINmeflprAHSIFApwLMIVG 284
Cdd:MTH00197 73 SNLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLA-TWQKLAPLLILAFN------SSSFMG--LLICS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 285 TIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIgsLSDMGLNGAFLQIIShgFIGAALFFLAGTSYDRIRLVYLDEM 364
Cdd:MTH00197 144 VLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSL--VYSPSIFMLYYLIYF--VIMFMLFLFLSKNNLSSLNQQYSNP 219
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 313184041 365 GGMAVPVPKIFTTFSILSmaslALPGMSGFVAELIVFFGIITSQNFfliqkiLITFVMAIGTILTPIYSLSM 436
Cdd:MTH00197 220 ESMSSNLVFLGLSFLSLG----GLPPLSGFFLKWLILTSLLSSNIS------LITFMLILSTCFSLYYYLSL 281
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
215-394 |
3.93e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 42.90 E-value: 3.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 215 IGFLIAFAVKSPIIPFHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLVRIN--MEFLPRAHSIfapwLMIVGT 285
Cdd:MTH00137 219 LGLILAATGKSAQFGLHPWLPSamegpTPVSAllHSST-MVVAGIFL------LIRLSplMENNQTALTT----CLCLGA 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 286 IQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIGIGslsdmgLNG---AFLQIISHGFIGAALFFLAGT---SYDR---I 356
Cdd:MTH00137 288 LTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIG------LNQpqlAFLHICTHAFFKAMLFLCSGSiihSLNDeqdI 361
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 313184041 357 RlvyldEMGGMAVPVPkiFTTfSILSMASLALPGM---SGF 394
Cdd:MTH00137 362 R-----KMGGLHHLTP--FTS-SCLTIGSLALTGTpflAGF 394
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
213-454 |
7.22e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 42.05 E-value: 7.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 213 FYIGFLIAFAV--KSPIIPFHTWLPdthgEA-----------HYSTcmllagiLLKMGAYGLVRINMEFLpraHSIFAPW 279
Cdd:MTH00165 180 LLIGLLIMLAAmtKSAQIPFSSWLP----AAmaaptpvsalvHSST-------LVTAGVYLLIRFNNLLF---SSFFSKF 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 280 LMIVGTIQIIYAASASPGQRNLKKRIAYSSVSHMGFIIIgIGSLSDMGLngAFLQIISHGFIGAALFFLAGT------SY 353
Cdd:MTH00165 246 LLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMS-ILSLGFPKL--AFFHLLTHALFKALLFLCAGSiihnmsNS 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 354 DRIRLvyldeMGGMAVPVPKIFTTFSILSMASLALPGMSGFVA-ELIVFFGIITSQNFFliqkilITFVMAIGTILTPIY 432
Cdd:MTH00165 323 QDIRF-----MGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSkDLILEMVSMSNLNFF------IFFLFFFSTGLTVSY 391
|
250 260
....*....|....*....|..
gi 313184041 433 SLSMlrqMFYGYKFFNAPNSYF 454
Cdd:MTH00165 392 SFRL---IYYSMSGDFNLKSLN 410
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
218-358 |
1.10e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 41.61 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 218 LIAFAV--KSPIIPFHTWLPDTHgEAHYSTCMLLAGILLKMGAYGLVRinmeFLPR-AHSIFAPW-LMIVGTIQIIYAAS 293
Cdd:PRK08168 205 LLVLAVilKTAQLPVHGWLIQVM-EAPTPVSALLHAGVVNLGGFVLIR----FAPLlEQAPPARWlLVLVGLATAVLAGL 279
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 313184041 294 ASPGQRNLKKRIAYSSVSHMGFIIIGIGslsdMGL-NGAFLQIISHGFIGAALFFLAGTSYDRIRL 358
Cdd:PRK08168 280 VMLTRISIKVRLAWSTVAQMGFMLLECG----LGLyELALLHLVAHSLYKAHAFLSASEAVRDTRL 341
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
219-429 |
3.30e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 39.52 E-value: 3.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 219 IAFAVKSPIIPFHTWLPDTHGEAHYSTCMLL------AGILLKMGAYGLVRINMeflprahsifapwLMIVGTIQIIYAA 292
Cdd:MTH00070 100 IALMMKLGIAPFHFWLPEVLQGLDLTTGLILstwqklAPMALLIQISHLLNSNL-------------LIIMGLLSTLIGG 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 293 SASPGQRNLKKRIAYSSVSHMGFIIIGIGSLSDMGLNGAFLQIIshgfIGAALFFLagtsydrirLVYLD--EMGGMAVP 370
Cdd:MTH00070 167 WGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLI----MTSSMFLM---------LMNLNstNINKLSSS 233
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 313184041 371 VPK--IFTTFSILSMASLA-LPGMSGFVAELIVFFGiITSQNFfliqkILITFVMAIGTILT 429
Cdd:MTH00070 234 WSKnpTLTSMMMLTLLSLGgLPPTTGFIPKWLILQE-LTKQNL-----TTLATLMALSALLS 289
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
111-447 |
8.76e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 38.61 E-value: 8.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 111 SRLFHFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLISVWGGKKRLYSATKFILYTAGSSVFLLLGVLGIGlyaS 190
Cdd:PRK06591 114 KSLFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLL---S 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 191 NEPTLNFETSAN--QSYPVALEIIFYIGF-LIAFAVKSPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVR---- 263
Cdd:PRK06591 191 ITGSLNMTDIAAylQEHTNSRIITIAIGFfLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKftyi 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 264 -INMEFLPRAHSIFAPWLMIVGTIQIIYAASAspgQRNLKKRIAYSSVSHMGFIiigigslsdmglngaFLQIISHGFIG 342
Cdd:PRK06591 271 iIGYETIKTAITNFIRPIALATLIIAPYFAYQ---AKNFKNIIIYSCFTQIGYV---------------FLLYVTENGII 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313184041 343 AALFFLAGTSYDRIRLVYLDEMGGMAVPVP-KIFTTFSILSmaSLALPGMSGFVAELIVFfgiitsqNFFLIQKILITFV 421
Cdd:PRK06591 333 ILPSLLLADSINKIALFLIDAYNESYKREPnKVLIIIAIIC--SCGLPISPLFFIKVNIL-------ELLLTQNLLLDFI 403
|
330 340
....*....|....*....|....*.
gi 313184041 422 maigtiltpIYSLSMLRQMFYGYKFF 447
Cdd:PRK06591 404 ---------IILLSSVGSLFYHYKMV 420
|
|
| |
