|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-445 |
8.17e-173 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 491.59 E-value: 8.17e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 1 MLKIILFLLFLTPVCFINNMYWMVQIMLFFISFIFLLMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESIN 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 81 KYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFY 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 161 VMNKTGSMNFYLMNNFMFNYDLLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQL 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 241 MNLKYSFVWISISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANV 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 321 SYERLGSRSMLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYLYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 598323954 401 FSQHGKLFSGVYSFSSGKIREYLLMLLHWLPLNLLILKSESCILW 445
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
33-446 |
4.03e-128 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 376.87 E-value: 4.03e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 33 FIFLLMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESINKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMF 112
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 113 YLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLM---NNFMFNYDLLYFCLLC 189
Cdd:MTH00150 81 YFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLIsslRKLLSSMGLWGLLVFL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 190 AFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTD 269
Cdd:MTH00150 161 AFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 270 LKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMTLWWFL 349
Cdd:MTH00150 241 VKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 350 LSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYLYSFSQHGKLFSGVYSFSSGKIREYLLMLLHW 429
Cdd:MTH00150 321 FCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHW 400
|
410
....*....|....*..
gi 598323954 430 LPLNLLILKSESCILWL 446
Cdd:MTH00150 401 VPLLLLILKSDLLFMWI 417
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
19-443 |
4.34e-124 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 367.77 E-value: 4.34e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 19 NMYWMVQIMLFFISFIFLLMN--NFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESINKYNNYKNLFLLNIVIL 96
Cdd:MTH00205 18 FKDWSFFSNLLLIGLFFSSFFfsNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIML 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 97 LLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNF 176
Cdd:MTH00205 98 LLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPL 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 177 MFNYD---LLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNLKYSFVWISIS 253
Cdd:MTH00205 178 NFSDFylfLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSIS 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 254 LVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLIN 333
Cdd:MTH00205 258 LWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMN 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 334 KGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYLYSFSQHGKLFSGVYS 413
Cdd:MTH00205 338 KGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISS 417
|
410 420 430
....*....|....*....|....*....|
gi 598323954 414 FSSGKIREYLLMLLHWLPLNLLILKSESCI 443
Cdd:MTH00205 418 FLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
27-446 |
4.82e-121 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 360.21 E-value: 4.82e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 27 MLFFISFIFLLMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESINKYNNYKNLFLLNIVILLLLLVLTFSS 106
Cdd:MTH00014 30 LLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSA 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 107 MSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMN---NFMFNYDLL 183
Cdd:MTH00014 110 SNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSmepPSIYLMNLW 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 184 YFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNLKYSFVWISISLVGGVLVSLV 263
Cdd:MTH00014 190 WLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLI 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 264 CLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAM 343
Cdd:MTH00014 270 CIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTM 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 344 TLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYLYSFSQHGKLFSGVYSFSSGKIREYL 423
Cdd:MTH00014 350 TMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHT 429
|
410 420
....*....|....*....|...
gi 598323954 424 LMLLHWLPLNLLILKSESCILWL 446
Cdd:MTH00014 430 LMTLHLVPLFILILKPDLITNWL 452
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
49-407 |
1.02e-115 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 346.80 E-value: 1.02e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 49 SYFLGCDMLSYGLVLLSLWICSLMLLASESINKYN--NYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFL 126
Cdd:MTH00124 53 TQWLGIDQISAPLLVLSCWLLPLMILASQNHLQHEplQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLIL 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 127 ILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLM---NNFMFNY---DLLYFCLLCAFLVKMPMFLV 200
Cdd:MTH00124 133 ITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLqltHPTLTNSwtnLLLWLACLMAFMVKMPLYGL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 201 HLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKALIAYSSVA 280
Cdd:MTH00124 213 HLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVS 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 281 HMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMTLWWFLLSSANMAAPPT 360
Cdd:MTH00124 293 HMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPT 372
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 598323954 361 LNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYLYSFSQHGKL 407
Cdd:MTH00124 373 INLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGTL 419
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
18-444 |
1.23e-112 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 338.87 E-value: 1.23e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 18 NNMYWMVQI----MLFFISfIFLLMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESINKYNNYKN--LFLL 91
Cdd:MTH00044 20 KNKLWPISIsqssLISLLS-LFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNNSPNNqrTFIS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 92 NIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFY 171
Cdd:MTH00044 99 LIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIP 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 172 LMN------NFMFNYDLLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNLKY 245
Cdd:MTH00044 179 LSElnwltsLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSANN 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 246 -SFVWISISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYER 324
Cdd:MTH00044 259 iSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYER 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 325 LGSRSMLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYLYSFSQH 404
Cdd:MTH00044 339 SGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNS 418
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 598323954 405 GKLFSGVYSFSSGKIREYLLMLLHWLPLNLLILKSESCIL 444
Cdd:MTH00044 419 GSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIILI 458
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
29-440 |
2.52e-108 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 327.64 E-value: 2.52e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 29 FFISFI----FLLMNNFMNYwseISYFLGCDMLSYGLVLLSLWICSLMLLASESINKYN--NYKNLFLLNIVILLLLLVL 102
Cdd:MTH00068 32 LIIAFLslmwFNLPSETMNF---TNKYFGIDQISSPLLILTCWLLPLMILASQNHLKNEpiNRQRTYISMLIILQLTLIL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 103 TFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNFMFNYDL 182
Cdd:MTH00068 109 AFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLELMSPMQLM 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 183 LY-------FCLLcAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNLKYSFVWISISLV 255
Cdd:MTH00068 189 TYtnkiwwlACLL-AFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYPFIILALW 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 256 GGVLVSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKG 335
Cdd:MTH00068 268 GVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRG 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 336 LLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYLYSFSQHGKLFSGVYSFS 415
Cdd:MTH00068 348 AQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNHLKTLF 427
|
410 420
....*....|....*....|....*
gi 598323954 416 SGKIREYLLMLLHWLPLNLLILKSE 440
Cdd:MTH00068 428 PTYTREHLLLALHILPMLLLILKPE 452
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
18-407 |
6.33e-107 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 324.15 E-value: 6.33e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 18 NNMYWM-VQIMLFFISFI-FLLMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASES--INKYNNYKNLFLLNI 93
Cdd:MTH00110 20 NNMIWInTTTYSLLISLIsLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMASQHhlSKEPLTRKKLYITML 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 94 VILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLM 173
Cdd:MTH00110 100 ILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLLL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 174 N------NFMFNYDLLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNLKYSF 247
Cdd:MTH00110 180 QlwaqplPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAY 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 248 VWISISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGS 327
Cdd:MTH00110 260 PFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHS 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 328 RSMLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYLYSFSQHGKL 407
Cdd:MTH00110 340 RTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSLYMLITTQRGKL 419
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
20-442 |
1.61e-105 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 320.35 E-value: 1.61e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 20 MYWMVQIMLFFISFIFLL--MNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESINKYN--NYKNLFLLNIVI 95
Cdd:MTH00206 21 LWRSTTFFSFLIALLFLLwfKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEpiNRQRIYITLLIV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 96 LLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLM-- 173
Cdd:MTH00206 101 LQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILyf 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 174 -NNFMFNYDLLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNLKYSFVWISI 252
Cdd:MTH00206 181 sKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFIIL 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 253 SLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLI 332
Cdd:MTH00206 261 GLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILG 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 333 NKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYLYSFSQHGKLFSGVY 412
Cdd:MTH00206 341 NRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLL 420
|
410 420 430
....*....|....*....|....*....|
gi 598323954 413 SFSSGKIREYLLMLLHWLPLNLLILKSESC 442
Cdd:MTH00206 421 SLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
37-440 |
9.27e-93 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 288.01 E-value: 9.27e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 37 LMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASES--INKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYL 114
Cdd:MTH00127 42 LKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILASQNhtAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYV 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 115 FFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNFMFNYDLLYF-------CL 187
Cdd:MTH00127 122 MFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQPLQLSSWAdklwwagCL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 188 LcAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNLKYSFVWISISLVGGVLVSLVCLRQ 267
Cdd:MTH00127 202 L-AFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQ 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 268 TDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMTLWW 347
Cdd:MTH00127 281 TDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWW 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 348 FLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYLYSFSQHGKLFSGVYSFSSGKIREYLLMLL 427
Cdd:MTH00127 361 FIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMAL 440
|
410
....*....|...
gi 598323954 428 HWLPLNLLILKSE 440
Cdd:MTH00127 441 HLLPLLLLILKPE 453
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
48-399 |
3.86e-69 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 227.27 E-value: 3.86e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 48 ISYFLGCDMLSYGLVLLSLWICSLMLLASesINKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLI 127
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILAS--WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 128 LGWGYqPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNFMFNYD-----LLYFCLLCAFLVKMPMFLVHL 202
Cdd:COG1008 152 GIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPltaqlLLFLAFFIAFAVKVPMFPFHT 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 203 WLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVInfLQLMN---LKYSFVWISISLVGGVLVSLVCLRQTDLKALIAYSSV 279
Cdd:COG1008 231 WLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFA--LPLFPeasAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 280 AHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMTLWWFLLSSANMAAPP 359
Cdd:COG1008 309 SHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 598323954 360 TLNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYLY 399
Cdd:COG1008 389 TSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
106-388 |
6.59e-66 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 212.94 E-value: 6.59e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 106 SMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNFMFNYD---- 181
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 182 --LLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNLKYSFVWISISLVGGVL 259
Cdd:pfam00361 81 llLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 260 VSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLA-NVSYERLGSRSMLINKGLLN 338
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 598323954 339 FMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSFLS 388
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
48-399 |
9.01e-64 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 213.53 E-value: 9.01e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 48 ISYFLGCDMLSYGLVLLSLWICSLMLLASesINKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLI 127
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLAS--WEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 128 LGWGYqPERLQAGVYLLFYTLLVSLPMLIGIFYV----MNKTGSMNFYLMNNFMFNYD---LLYFCLLCAFLVKMPMFLV 200
Cdd:PRK05846 152 GVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIADLLNLPLPPGvqyWLFLAFFIAFAVKMPMFPL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 201 HLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLR-VINFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKALIAYSSV 279
Cdd:PRK05846 231 HTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRfSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSI 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 280 AHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMTLWWFLLSSANMAAPP 359
Cdd:PRK05846 311 SHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPG 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 598323954 360 TLNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYLY 399
Cdd:PRK05846 391 TSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
104-399 |
3.80e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 209.15 E-value: 3.80e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 104 FSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNFMFNYDLL 183
Cdd:MTH00204 129 FSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQ 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 184 YFCLLCAFL---VKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI-NFLQLMNLKYSFVWISISLVGGVL 259
Cdd:MTH00204 209 KWLLVGFFLslaVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSwPLFPAASEYFAPLIVMLSVIAVIY 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 260 VSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNF 339
Cdd:MTH00204 289 GSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLT 368
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 340 MPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYLY 399
Cdd:MTH00204 369 MPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
48-399 |
3.90e-59 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 200.94 E-value: 3.90e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 48 ISYFLGCDMLSYGLVLLSLWICSLMLLASEsiNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLI 127
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASW--ESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 128 LGWGyQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTG-SMNFYLMNNFMFNYD---LLYFCLLCAFLVKMPMFLVHLW 203
Cdd:TIGR01972 147 GVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLELLNLPLPFGvqtWLFLAFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 204 LPKAHVEAPVSGSMILAGIMLKLGGYGLLRVInfLQLM---NLKYSFVWISISLVGGVLVSLVCLRQTDLKALIAYSSVA 280
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLRFN--LPLFpdaSLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSIS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 281 HMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMTLWWFLLSSANMAAPPT 360
Cdd:TIGR01972 304 HMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGT 383
|
330 340 350
....*....|....*....|....*....|....*....
gi 598323954 361 LNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYLY 399
Cdd:TIGR01972 384 SGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
104-399 |
7.29e-58 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 197.58 E-value: 7.29e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 104 FSSMSLFMFYLFFESSLIPtLFLILG-WGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNFMFNYDL 182
Cdd:MTH00217 126 FTILDLVGFYILFEGILIP-MFLIIGiWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKEL 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 183 LYFCLLCAFL---VKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNLKYSFVWI-SISLVGGV 258
Cdd:MTH00217 205 QYFIFLGFFLslaIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAII 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 259 LVSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLN 338
Cdd:MTH00217 285 YGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVI 364
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 598323954 339 FMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYLY 399
Cdd:MTH00217 365 TMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
104-398 |
1.01e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 173.57 E-value: 1.01e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 104 FSSMSLFMFYLFFESSLIPtLFLILG-WGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLM--NNFMFNY 180
Cdd:MTH00226 148 FSVLDIFMFYILFEGVLIP-MYLILGiWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLasCSHVVSE 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 181 DL---LYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI-NFLQLMNLKYSFVWISISLVG 256
Cdd:MTH00226 227 QTqkwIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSwPILPLGAQNLAPAVIAMGIVG 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 257 GVLVSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGL 336
Cdd:MTH00226 307 IVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGL 386
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 598323954 337 LNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYL 398
Cdd:MTH00226 387 SITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
19-417 |
1.80e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 167.78 E-value: 1.80e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 19 NMYWMVQIMLFFISFIFLLMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLasesinkyNNYKNLFLLNIVILLL 98
Cdd:MTH00094 2 SLLFFFSPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLL--------SEKNFNLLILSNLLIL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 99 LLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNktgsMNFYLMNNFMF 178
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFF----FFSLCYFDFFL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 179 NYDLLYFCLLCaFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFlqlMNLKYSFVWISISLVGGV 258
Cdd:MTH00094 150 SWEMFFILSLS-FMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGS---LNFVYNNFWIIFSLLGMI 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 259 LVSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLN 338
Cdd:MTH00094 226 LSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFS 305
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 598323954 339 FMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLYLYSFSQHGKLFSGVYSFSSG 417
Cdd:MTH00094 306 SSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVG 384
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-375 |
2.83e-41 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 153.26 E-value: 2.83e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 48 ISYFLGCDMLSYGLVLLSLWICSLMLLASESINkynNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLI 127
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKVT---RKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 128 LGWGYQpERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNFMFNYD-----LLYFCLLCAFLVKMPMFLVHL 202
Cdd:PRK12561 128 SIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPlalelLLYAGFLIAFGVKLPIFPLHT 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 203 WLPKAHVEAPVSGSMILAGIMLKLGGYGLLRV-INFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKALIAYSSVAH 281
Cdd:PRK12561 207 WLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSH 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 282 MGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPaMTLWWFLLSS-ANMAAPPT 360
Cdd:PRK12561 287 MGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMP-KTFALFTASSmASLALPGM 365
|
330
....*....|....*
gi 598323954 361 LNLLGEISLLNSIVS 375
Cdd:PRK12561 366 SGFVSELTVFLGITS 380
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
55-403 |
2.49e-39 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 146.45 E-value: 2.49e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 55 DMLSYGLVLLSLWICSLMLLASESINKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYqP 134
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT-K 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 135 ERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNFMFNYD-----LLYFCLLCAFLVKMPMFLVHLWLPKAHV 209
Cdd:COG0651 154 EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDpglllAAFALLLVGFGIKAALFPLHFWLPDAYP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 210 EAPVSGSMILAGIMLKLGGYGLLRV--INFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLA 287
Cdd:COG0651 234 AAPSPVSALLSGLLTKVGVYAILRVltLLFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 288 GLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEI 367
Cdd:COG0651 314 GLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKW 393
|
330 340 350
....*....|....*....|....*....|....*..
gi 598323954 368 SLLNSIV-SWSWISMIMLSFLSFFSAAYTLYLYSFSQ 403
Cdd:COG0651 394 LLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
52-358 |
1.27e-34 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 134.69 E-value: 1.27e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 52 LGCDMLSYGLVLLSLWICSLMLLASESINKYNNyknLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWG 131
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAWPVTRNSR---LFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 132 YQpERLQAGVYLLFYTLLVSLPMLIGIFyvmnktgSMNFYLMNNFMFNYD-------------LLYFCLLCAFLVKMPMF 198
Cdd:CHL00011 157 GK-KRLYSATKFILYTAGGSIFLLIGVL-------GMGLYGSNEPTLNFEtlanqsypvaleiLFYIGFLIAYAVKLPII 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 199 LVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRvINFLQLMNLKYSFV-WISIslVGGVLV---SLVCLRQTDLKALI 274
Cdd:CHL00011 229 PLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIR-INMELLPHAHSIFSpWLVI--VGAIQIiyaASTSLGQRNLKKRI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 275 AYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMTLWWFLLSSAN 354
Cdd:CHL00011 306 AYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMAS 385
|
....
gi 598323954 355 MAAP 358
Cdd:CHL00011 386 LALP 389
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-368 |
1.30e-34 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 134.83 E-value: 1.30e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 48 ISYFLGCDMLSYGLVLLSLWICSLMLLAS-ESINKYNNYknlfLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFL 126
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSdESIQRPRFY----YSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 127 ILGWGYQpERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNFMFNYD-----LLYFCLLCAFLVKMPMFLVH 201
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPlstqlLLLAPILVGFGIKIPLVPFH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 202 LWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNLKYSFVWISISLVGGVLVSLVC-LRQTDLKALIAYSSVA 280
Cdd:PRK06473 226 TWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCaIAQKDMKKMVAYSSIG 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 281 HMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMTLWWFLLSSANMAAPPT 360
Cdd:PRK06473 306 HMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGI 385
|
....*...
gi 598323954 361 LNLLGEIS 368
Cdd:PRK06473 386 PGMVGFIA 393
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
52-358 |
3.68e-32 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 128.29 E-value: 3.68e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 52 LGCDMLSYGLVLLSLWICSLMLLASESINkynnYK-NLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGW 130
Cdd:PRK02546 83 VGADGLSMPLILLTGFITTLAVLAAWPVT----FKpKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIW 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 131 GYQpERLQAGVYLLFYTLLVSLPMLIGI----FYVMNKTGSMNFYLMNNFMFNYDLL-YFCLLCAFLVKMPMFLVHLWLP 205
Cdd:PRK02546 159 GGK-KRQYAATKFILYTAGSSLFILLAAlamaFYGDTPTFDMTALAAKDFGLGFQLLcYAGLLIAYGVKLPIVPLHTWLP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 206 KAHVEAPVSGSMILAGIMLKLGGYGLLRV-INFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGI 284
Cdd:PRK02546 238 DAHGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 317
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 598323954 285 VLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMTLWWFLLSSANMAAP 358
Cdd:PRK02546 318 VLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALP 391
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
48-365 |
4.52e-27 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 113.27 E-value: 4.52e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 48 ISYFLGCDMLSYGLVLLSlwiCSLMLLASESINKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLI 127
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 128 LGWGYQpERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMN----NFMFNYDLLYFC-LLCAFLVKMPMFLVHL 202
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAistqNLSLNTQLILLTgLLLGFGIKIPLVPLHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 203 WLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVinFLQLMNLKYSFVWISISLVGGVLV---SLVCLRQTDLKALIAYSSV 279
Cdd:PRK07363 227 WLPDAYTEASPAVAILLGGVLAKLGTYGLLRF--GLQLFPQTWSLVAPGLAIIGTISViygALSAIAQKDIKRMVAYSSI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 280 AHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMTLWWFLLSSANMAAPP 359
Cdd:PRK07363 305 GHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAG 384
|
....*.
gi 598323954 360 TLNLLG 365
Cdd:PRK07363 385 IPGLVG 390
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-398 |
4.90e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 104.19 E-value: 4.90e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 109 LFMFYLFFESSLIPTLFLIlGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLM-NNFMFNYDL---LY 184
Cdd:PRK08375 128 LFNLFVFLEIMSLSSYALV-AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLaGALAENPTVvtaFG 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 185 FCLLcAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI------NFLQLMNLKYSFVWI-SISLVGG 257
Cdd:PRK08375 207 FVLL-ALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfggDFRFALGLGWLLAVLaLLSMLVG 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 258 VLVSLVclrQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLL 337
Cdd:PRK08375 286 SLAALG---QDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLG 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 598323954 338 NFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVS-WSWISMIMLSFLSFFSAAYTLYL 398
Cdd:PRK08375 363 RRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRI 424
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
22-400 |
1.82e-21 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 95.76 E-value: 1.82e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 22 WMVQIMLFFISFIFLLMNNFMNYWSEISYFLGCDMLSYGLVLLS-----LWICSLMLLASESINKYNNYKNLFLLNIVIL 96
Cdd:MTH00062 1 FYFFSVGFFLGFLLLLLFCLLYSSGVGCCILVVNNVFNGLFIFDslsfyLILLVLFLGLYSQVMFYNLLSGVSRFFLFLS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 97 LLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNF 176
Cdd:MTH00062 81 LIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 177 MFNYDLLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLqlmNLKYSFVWISISLVG 256
Cdd:MTH00062 161 DSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFI---FSGSFLGYLFLCCLF 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 257 GVLVSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGL 336
Cdd:MTH00062 238 SVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSG 317
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 598323954 337 LNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLnSIVSWSWISMIMLSFLSFFSAAYTLYLYS 400
Cdd:MTH00062 318 INGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLV-SSSFGVLVYLLFWCFYLFFGGLVPLILLG 380
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
41-391 |
5.05e-19 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 89.79 E-value: 5.05e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 41 FMNYWSEISYFLGCDMLSYG-LVLLSLWICSLMLLASESIN--KYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFE 117
Cdd:PRK08667 62 LWGIAPGLDITFHIDRLAAFfIILIGLVSLCVAIYSLGYNEhmSSNERANLLSALTALFILSMLGVVASANTFSFLFFWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 118 SSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNFMFNYDLLYFCLLCAFLVKMPM 197
Cdd:PRK08667 142 IMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFLLLFLGFGIKAGI 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 198 FLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKALIAYS 277
Cdd:PRK08667 222 IPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 278 SVAHMGIVLAGLLTMTYWGLCGSYMLM-----------IAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMTLW 346
Cdd:PRK08667 302 SIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSAL 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 598323954 347 WFLLSSANMAAPPTLNLLGEISLLNSI-----VSWSWISMIMLSFLSFFS 391
Cdd:PRK08667 382 FLVGAVSIAALPPFNGFASELLLYESFfqsfsVADPLIKILLFSVLAIFA 431
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
104-401 |
2.20e-18 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 87.74 E-value: 2.20e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 104 FSSMSLFMFYLFFESSLIPTLFLILgWGYQPERLQAGVYLLFyTLLVSLPMLIGIFYVMNKTGSMNFYLMNNFMFN---- 179
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADISQGLINdtst 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 180 -YDLLYFCLLCAF-LVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNLKYSFVWIS------ 251
Cdd:PRK08668 193 gFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLFSEFGTYRgvplfn 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 252 --ISLVGGVLV---SLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLG 326
Cdd:PRK08668 273 yiLAWLGNISIivgTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTG 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 598323954 327 SRSMLINKGLLNFMPaMTLWWFLLSSANMAA-PPTLNLLGEISLLNSIVSwswISMIMLSFLSFF-SAAYTLYLYSF 401
Cdd:PRK08668 353 TTKISEMGGLIEKMP-FTFAMYLVAIISLAGiPPMSGFASKWLIFEALIS---KGMPITAFMAFFgSIGSFLYVFRP 425
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
190-362 |
1.07e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 82.33 E-value: 1.07e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 190 AFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI-------NFLQLMNLKYSFVWISISLVGGVLVSL 262
Cdd:PRK12667 232 AFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGAL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 263 VCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPA 342
Cdd:PRK12667 312 MMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPI 391
|
170 180
....*....|....*....|
gi 598323954 343 MTLwWFLLSSANMAAPPTLN 362
Cdd:PRK12667 392 ASF-AFLIGALSLVGIPPLN 410
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
188-362 |
4.80e-16 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 80.32 E-value: 4.80e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 188 LCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRV-INFLQLMNLKYSFVWISISLVGGVLVSLVCLR 266
Cdd:PRK06521 217 LFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVvFDLLGAPGWWWGVLVLALGAISAVLGVLYALA 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 267 QTDLKALIAYSSVAHMGIVLAGL-LTMTY----------WGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKG 335
Cdd:PRK06521 297 EHDLKRLLAYSTIENIGIIFVGLgLAMVFiaygmpllaaLALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGG 376
|
170 180
....*....|....*....|....*..
gi 598323954 336 LLNFMPaMTLWWFLLSSANMAAPPTLN 362
Cdd:PRK06521 377 LIRRMP-WTAWAFLIGCLAISALPPLN 402
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
155-395 |
8.38e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 76.31 E-value: 8.38e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 155 LIGIFYVMNKTGSMN---FYLMNNFMFNYDLLYFCLLCAFL---VKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGG 228
Cdd:PRK12662 177 LIGIGFLYAITGTLNmgdMFLIIQDLPTNRAIQIGVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMI 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 229 YGLLRVI-----NFLQLMNLKYSFVWISISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYML 303
Cdd:PRK12662 257 YLIIRIVydvfkANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAY 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 304 MIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIV-SWSWISMI 382
Cdd:PRK12662 337 IVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIkSNAWIGLV 416
|
250
....*....|...
gi 598323954 383 MLSFLSFFSAAYT 395
Cdd:PRK12662 417 VLLVGSGLSVIYV 429
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-324 |
1.78e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 74.99 E-value: 1.78e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 103 TFSSMSLFMFYLFFESSLIPTlFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNfmfnYDL 182
Cdd:PRK07234 110 AFVCADLISLYVALEVLSIAT-FLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLAT----ADP 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 183 LYFCLLCA-FLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVInflqlmnLKYSFVWISISLVGG---V 258
Cdd:PRK07234 185 EAFALIALgLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA-------LDVPGLDLIVRIFGVgtaL 257
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 598323954 259 LVSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLcgsymlmiAHGLCSSGLFCLANVSYER 324
Cdd:PRK07234 258 LGVLFALLEKDLKRMLAFSTISQLGFILAAPLVGGLYAL--------AHGLVKSTLFLCAGALPSR 315
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-362 |
7.95e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 73.21 E-value: 7.95e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 109 LFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNF----YLMNNFMFNYDLLY 184
Cdd:PRK08376 143 LFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMaylaVKMSENPTVVAKIA 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 185 FCLLCA-FLVKMPMFLVHLWLPKAHVEAPVSGSMILagIMLKLGG-YGLLRVINFLQLMNLKYSFV-WISI-----SLVG 256
Cdd:PRK08376 223 LALFIAgLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAINLATVgWVIIilgclTMFV 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 257 GVLVSLVclrQTDLKALIAYSSVAHMGIVLAGL---------LTMTYWG---LCGSYMLMIAHGLCSSGLFCLANVSYER 324
Cdd:PRK08376 301 GVAMAVV---QKDVKRLLAYHSVSQIGYMLLGLgvglaalgdPAMASYGeiaLAGGIYHIVNHALYKALLFLTAGAVIYE 377
|
250 260 270
....*....|....*....|....*....|....*...
gi 598323954 325 LGSRSMLINKGLLNFMPaMTLWWFLLSSANMAAPPTLN 362
Cdd:PRK08376 378 TGTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFN 414
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
187-384 |
2.47e-13 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 71.50 E-value: 2.47e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 187 LLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLR--VINFLQLMNLKYSFVWISISLVGGVLVSLVC 264
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRyyILIDAAIGSDFPGRLLLIFGLLSVLVAAFFL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 265 LRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAmT 344
Cdd:PRK06458 300 LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPL-T 378
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 598323954 345 LWWFLLSSANMA-APPTLNLLGEISLLNSIVSWS-WISMIML 384
Cdd:PRK06458 379 GWGLMLGALAIAgMPPFGVFISEFLILTAGLARGpLLIAILL 420
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
187-398 |
4.96e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 70.55 E-value: 4.96e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 187 LLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNL--KYSFVWISISLVGGVLVSLVC 264
Cdd:PRK08676 212 IFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAaeQFSNVLIGLGIFSIAVAAFSM 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 265 LRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMT 344
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 598323954 345 LWWFLLSSANMAAPPTLNLLGEISLLNSIVSWS-WISMIMLSFLSFFSAAYTLYL 398
Cdd:PRK08676 372 WGVILGSAAIIGMPPFPLFLSKFFILLQLGGISvWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-370 |
5.97e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 70.38 E-value: 5.97e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 103 TFSSMSLFMFYLFFESSLIPTlFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNFMFNYD- 181
Cdd:PRK12665 127 AFLAGDLFNLYVGFEILLVAS-YVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELPs 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 182 ----LLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFL----QLMNLkysFVWISI- 252
Cdd:PRK12665 206 gtrtALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLfpggGLDTL---LMVVALl 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 253 SLVGGVLVSLVclrQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLI 332
Cdd:PRK12665 283 TMVVGILGAIA---QSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRR 359
|
250 260 270
....*....|....*....|....*....|....*....
gi 598323954 333 NKGLLNFMPAMTLwWFLLSSANMAA-PPTLNLLGEISLL 370
Cdd:PRK12665 360 LGGLAKASPLLAV-LFFVPALNLGGiPPFSGFIGKVALL 397
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
194-370 |
1.11e-12 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 70.07 E-value: 1.11e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 194 KMPMFLVHLWLPKAHVEA-PVSgSMILAGIMLKLGGYGLLRvinFLQLM--NLKYSFVWISISLVGGVLVSLVCLRQTDL 270
Cdd:PRK12650 221 KSAQFPFHFWLPEAMAAItPVS-AFLHAAAVVKAGIYLLLR---FSPVFhdVAVWNWLLIIVGMITALMGAVFAVQKTDL 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 271 KALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPaMTLWWFLL 350
Cdd:PRK12650 297 KKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMP-FTFVSVTI 375
|
170 180
....*....|....*....|.
gi 598323954 351 SSANMAA-PPTLNLLGEISLL 370
Cdd:PRK12650 376 AALSMAAvPPLFGFVSKEGML 396
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-401 |
4.34e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 64.84 E-value: 4.34e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 50 YFLGCDMLSYGLVLLS----LWICSLMLLASESINKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLF 125
Cdd:PRK06589 75 YSIGLHLEPLGLIFLLligfLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAF 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 126 LIlGWGYQPERLQAGV-YLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNFMFNYDLLYFCLLCAFLVKMPMFLVHLWL 204
Cdd:PRK06589 155 LI-GHTRNNISLSGGYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 205 PKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFL----QLMNLKYSFVW-ISISLVGGVLVSLVCLRQTDLKALIAYSSV 279
Cdd:PRK06589 234 PAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIfglsYLQRIFAEFNWlIFIPIVSIFYSSLKALKTDNIKKILAYSTI 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 280 AHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMTLWWFLLSSANMAAPP 359
Cdd:PRK06589 314 SQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPI 393
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 598323954 360 TLNLLGEISLL-----NSIVSWSWISMIMLSFLSFFSAAYTLYLYSF 401
Cdd:PRK06589 394 FSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKILSS 440
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
187-398 |
4.13e-10 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 61.71 E-value: 4.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 187 LLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNLKYSFVW--ISISLVGGVLVSLVC 264
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKlvIIMATLTVFFAELSA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 265 LRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMT 344
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 598323954 345 LWWFLLSSANMAAPPTLNLLGEISLLNSIVS--WSWISMIMLsFLSFFSAAYTLYL 398
Cdd:PRK08377 372 LALTIGALSTVGIPLFNVFWSKFRIILAGLSagYTWPVALVL-GASVVEAVYYFRL 426
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
111-398 |
4.81e-10 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 61.69 E-value: 4.81e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 111 MFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIG--IFYVMNKTGSMNFYLMNNFMFNYDLLY---- 184
Cdd:PRK12646 134 LMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGfiMLYIMTGTNNITEILGQADHIKNHGLFipmi 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 185 FCLLCAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRVINFLQLMNLkYSFVWISISLVGGVLVSLV 263
Cdd:PRK12646 214 FMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLGLSNM-YIYIVTFVGLITMLFGSIT 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 264 CLRQTDLKALIAYSSVAHMGIV-----LAGLLTMTYWGLCGSYMLMIA---------HGLCSSGLFCLANVSYERLGSRS 329
Cdd:PRK12646 292 ALKQWDLKGILAYSTISQLGMImamvgIGGGYAQHQQDAIASIYVFVLfaalfhlmnHAIFKCALFMGVGIIDHEAGTRD 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 330 MLINKGLLNFMPAMTLwWFLLSSANMAAPPTLN-LLGEISLLNSIVS------WSWISMIMLSFL----SFFSAAYTLYL 398
Cdd:PRK12646 372 IRILSGMRQLFPKMNL-VMTIAALSMAGVPFLNgFLSKEMFLDALTQtgqlsqFSLISMIIIVFIgviaSIFTFTYALYM 450
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-397 |
7.70e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 54.93 E-value: 7.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 109 LFMFYLFFEsslIPTLFLILGWGYQPER-------LQAgvylLFYTLLVSLPMLIGIFYVMNKTGSmnfYLMNNFMFN-- 179
Cdd:PRK12644 128 LLLLYVFWE---LTTVLSFLLIGHYAERaasrraaLQA----LLVTTAGGLAMLVGIIILGQAAGT---YRLSELLADpp 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 180 ----YDLLYFCLLCAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRvinflqlmnLKYSF----VWI 250
Cdd:PRK12644 198 tgpaVSVAVVLILVGALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVAR---------LAPGFadvpVWR 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 251 SISLVGGVLVSLV----CLRQTDLKALIAYSSVAHMG--IVLAGLLTMTYwGLCGSYMLMiAHGLCSSGLFCLANVSYER 324
Cdd:PRK12644 268 PTVLVLGLATMLLggwrALRQHDLKLILAYGTVSQLGflTVLVGIGTRDA-ALAGLAMLL-AHALFKAALFLVVGIIDHS 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 325 LGSRSmlINK--GLLNFMPAMtLWWFLLSSANMAA-PPTLNLLGEISLLNSIV---SWSWISMIMLSFL---SFFSAAYT 395
Cdd:PRK12644 346 TGTRD--IRKlsGLGRRQPVL-AVVAALAAASMAGlPPLLGFVAKEAALEAVLhdgALGPAGPVVLAGIvlgSILTVAYS 422
|
..
gi 598323954 396 LY 397
Cdd:PRK12644 423 LR 424
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
12-87 |
1.26e-07 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 49.83 E-value: 1.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 12 TPVCFINNMYWM-----VQIMLFFISFIFLLMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESINKYNNYK 86
Cdd:pfam01059 12 IPLTFLSKPKWLwttstLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILASQKHLKSEPNN 91
|
.
gi 598323954 87 N 87
Cdd:pfam01059 92 R 92
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
108-399 |
2.25e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 53.23 E-value: 2.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 108 SLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNFMFN------YD 181
Cdd:COG1009 132 NLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTilssplLT 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 182 LLYFCLLCAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRVINFLQLmnlkYSFVWISISLVGGV-- 258
Cdd:COG1009 212 LILLLLLLGAFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFAL----SPVWLTVVAIIGAIta 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 259 -LVSLVCLRQTDLKALIAYSSVAHMGIVLAGLltmtywGLcGSY----MLMIAHGLCSSGLFCLANVSYERLGSRSMLIN 333
Cdd:COG1009 287 lFAALIALAQTDIKRVLAYSTVSQLGYMFLAL------GV-GAYvaalFHLLTHAFFKALLFLGAGSVIHATGTRDIRKM 359
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 334 KGLLNFMPAmTLWWFLLSSANMAA-PPTLNLLGEISLLNSIV---SWSWISMIMLSFLSFFSAAYTLYLY 399
Cdd:COG1009 360 GGLRKKMPI-TAITFLIGALSLAGiPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLF 428
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
106-397 |
2.35e-07 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 53.05 E-value: 2.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 106 SMSLFMFYLFFESSLIPTLFLIlGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNFMFNYDLLYF 185
Cdd:PRK06525 132 SSTLLGLLLFFEITGLCSWALI-SYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKYLVF 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 186 C-LLCAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRVINFLQLMNLKYSFVWISISLVGGVLVSLV 263
Cdd:PRK06525 211 LgILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLM 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 264 CLRQTDLKALIAYSSVAHMGIVLAGLLTMTY---WGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFM 340
Cdd:PRK06525 290 YLPQQDMKRLLAYSTITQLGYMFFGLSLAILgsrLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKL 369
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 598323954 341 PAMTLWWFLLSSANMAAPP------TLNLLGEISLLNSIVSWSWISMIMLSFLSFFSAAYTLY 397
Cdd:PRK06525 370 PLVGVGFCVAALAITGVPPfngffsKFPIFAAGFELSVEYWILLPAMVLLLIESVASFAWFLR 432
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
109-329 |
2.51e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 52.64 E-value: 2.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 109 LFMFYLFFESSLIPTlFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNF--------YLMNNFMFNy 180
Cdd:PRK12663 130 LFNLYVWFEVMLIAS-FVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMahiamrlnDMGDTATLT- 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 181 dLLYFCLLCAFLVKMPMFLVHlWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFL---QLMNLKYSFVWIS-ISLVG 256
Cdd:PRK12663 208 -TIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqERELLHPLLATMAaITMVI 285
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 598323954 257 GVLVSLVclrQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRS 329
Cdd:PRK12663 286 GALGALA---YKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRS 355
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
154-361 |
2.61e-07 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 52.81 E-value: 2.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 154 MLIGIFYVMNKTGSMNFYLMNNFMFNYD----LLYFCL---LCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILA------ 220
Cdd:COG1007 169 LLYGISLLYGATGSLNLAGIAAALAAGGanspLLLLGLvlvLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLAtapkia 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 221 --GIMLKLGGYGLLRVINFLQLMnlkysFVWISI-SLVGGvlvSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGL 297
Cdd:COG1007 249 afAALLRLLVEAFPGLAADWQLL-----LAVLAVlSMTVG---NLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGV 320
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 598323954 298 CGSYMLMIAHGLCSSGLF-CLANVSYERLGSRSMLINKGLLNFMP----AMTLwwFLLSSANMaaPPTL 361
Cdd:COG1007 321 SAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPllalAMTI--FLLSLAGI--PPTA 385
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
106-393 |
3.55e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 52.61 E-value: 3.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 106 SMSLFMFYLFFESSLIPTLFLIlgwGYQPER-------LQAgvylLFYTLLVSLPMLIGIFYVMNKTGSMN---FYLMNN 175
Cdd:PRK12647 114 SDNLITLFVFWELTSITSFLLI---GFNHEReaarraaLQA----LLVTGGGGLALLAGLILLGNVTGTYSlseLLASGD 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 176 FMFN---YDLLYFCLLCAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRvinflqlMN--LKYSFVW 249
Cdd:PRK12647 187 VIREhplYLAILLLVLGGAFTKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR-------LNpvLGGTPLW 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 250 -ISISLVGG---VLVSLVCLRQTDLKALIAYSSVAHMGIV--LAGLLTMTYWGLCGSYmlMIAHGLCSSGLFCLANVSYE 323
Cdd:PRK12647 259 qTILPLFGGltmLTGALLAVRQTDLKLILAYSTVSALGTLvmLLGLGSELAIKAAVLF--LVAHSLYKGALFMVAGIIDH 336
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 598323954 324 RLGSRSMLINKGLLNFMPaMTLWWFLLSSANMAA-PPTLNLLGEISLLNSIVSWSWISMImLSFLSFFSAA 393
Cdd:PRK12647 337 ETGTRDITKLGGLRRAMP-ITAAAALLAALSMAGlPPLFGFLAKELIYEALLEAPLWSLI-LTVAAVLGNA 405
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-362 |
1.14e-06 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 50.98 E-value: 1.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 200 VHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRvinfLQLMNLKYSFVWISISLVGGVLVSLV----CLRQTDLKALIA 275
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILT----LSLLGGNAPLWWGVALLVLGMITAFVgglyALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 276 YSSVAHMGIVLAGL-----------LTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLNFMPAMT 344
Cdd:PRK08042 275 YHTLENIGIILLGLgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*...
gi 598323954 345 LwWFLLSSANMAAPPTLN 362
Cdd:PRK08042 355 I-AMLVGLMAMAALPPLN 371
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
149-315 |
1.62e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 50.20 E-value: 1.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 149 LVSLPMLIGIFYVMNKTGSMNFYLM----NNFMFNYDLLYF---CLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAG 221
Cdd:PRK05777 165 LASGFLLYGMSLLYGATGSLSFAGIakalADGSGNSLLLLFglvFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLAT 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 222 IMlKLGGYG-LLRVIN--FLQLMNLKYSFVWIsISLVGGVLVSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLC 298
Cdd:PRK05777 245 AP-KIAAFAvLLRLLVvaFGGLSEDWQQVLAI-IAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYS 322
|
170
....*....|....*..
gi 598323954 299 GSYMLMIAHGLCSSGLF 315
Cdd:PRK05777 323 AVLFYLLAYLFMTLGAF 339
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
170-393 |
4.23e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 45.94 E-value: 4.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 170 FYLMNNFMFNYDLLYFCLLCA---FLVKMPM--FLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVINFLQLMNLK 244
Cdd:PRK06459 144 FIISGTTNFSYLPSPVPLILAsfgFIIKMGMmpFLVSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIG 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 245 YSFVWI----SISLVGGVLVSLVClrqTDLKALIAYSSVAHMGIVLA--GLLTMTY--WGLCGSYMLM------IAHGLC 310
Cdd:PRK06459 224 YFGLTIlaigAFSILFGALYAYVS---ENVKGLLAFSTIENNGAILValGLYMVTKqlITSIEHFSLItvilysFAHSVA 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 311 SSGLFCLANVSYERLGSRSMLINKGLlnfmpaMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSFLSFF 390
Cdd:PRK06459 301 KTGLFLSSGLQEKQSITYSKKIRNRW------IELGLTLLASSLSGLLPNIGGVASWLLLESLFMFAYVLHNVISILFIV 374
|
...
gi 598323954 391 SAA 393
Cdd:PRK06459 375 TGA 377
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
109-288 |
1.05e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 44.50 E-value: 1.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 109 LFMFYLFFESSLIPTLFLILGWGyQPERLQAGV-YLLFYTLLVSLpMLIGIFYVMNKTGSMNFYLMNNFMFNYDLLyfcL 187
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARG-TKAAVRAGFrYLLVHVLGGVL-LLAGILLHYAETGSFAFGAIAGLGGTAAWL---I 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 188 LCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI-NFLQLmnlkysfVWI-SISLVGGVLVSLVcl 265
Cdd:PRK12668 190 LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFpGTELL-------IYIgAAMAVYGVFFALL-- 260
|
170 180
....*....|....*....|...
gi 598323954 266 rQTDLKALIAYSSVAHMGIVLAG 288
Cdd:PRK12668 261 -ENDLRRLLSYHIVSQVGYMVAG 282
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
182-315 |
2.53e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 43.31 E-value: 2.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 182 LLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAgIMLKLGGYGLLRVInflqlmnLKYSFVWISISLVGGVLVS 261
Cdd:MTH00198 300 LGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIA-IIPKFTVYILLTSL-------VITSKLLLSVAIISLVVGA 371
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 598323954 262 LVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLF 315
Cdd:MTH00198 372 FGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASF 425
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
109-398 |
3.31e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 42.71 E-value: 3.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 109 LFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLpMLIGIFYVMNKTGSMNFYLMNNFMFNyDLLYFCLL 188
Cdd:PRK06277 122 IFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSI-LLLGIGFLLASTGTLNITDIHNALLV-NPTSPVIY 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 189 CAFLVKMPMFLVHLWLPKAHV-------EAPVSGSMILAG---IMLKLGGYGLLRVINFLQLMNLkYSFVWISISLVGGV 258
Cdd:PRK06277 200 GGLLLLIFGLLYGSGLPPFHTiksdiyaKAKPFGSALLQTfskFVLVALMLVIFKLFGGLSYFPS-AQGVLIALSVLAMV 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 259 LVSLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRSMLINKGLLN 338
Cdd:PRK06277 279 FGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLP 358
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 598323954 339 FMPAMTLwWFLLSSANMAAPPTLN------LLGEISLLNSIVSWSwISMIMLS---FLSFFSAAYTLYL 398
Cdd:PRK06277 359 VMPVVAF-MVLCAKLAISGVPPFNgfqsklMLAQAAMQANMPELA-IIMIIVSigtFVSMMKAFYLIYL 425
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-318 |
3.89e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 42.53 E-value: 3.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 109 LFMFYLFFESSLIPTLFLILGwGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMNNFMFNYD------- 181
Cdd:PRK12666 131 LFNLFVFFEVLLAASYGLLLH-GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPaadrall 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 182 ----LLyfcLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAgIMLKLGGYGLLRVinflqlmnlkySFVWISIS---- 253
Cdd:PRK12666 210 eagaAL---LLVVFLIKAAMWPLNFWLPPAYAAASAPVAALFA-IMTKVGIYAILRL-----------STLLFGPEagas 274
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 598323954 254 -------LVGGVLVSLVC-----LRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLFCLA 318
Cdd:PRK12666 275 agfgqdwLLPGGLATLAFgaigvLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
104-362 |
4.18e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 42.89 E-value: 4.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 104 FSSMSLFMFyLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGS------MNFYLMNNFM 177
Cdd:PRK12649 129 FSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTydiatiLQDSELIENI 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 178 FNYDLLYFCLLCAFL---VKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRVINFLQlmNLKYSFVWIS-I 252
Cdd:PRK12649 208 KGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIFS--GTEAWFILVSgT 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 253 SLVGGVLVSLVCLRQTDLKALIAYSSVAHmgivLAGLLTMTYW--------GLCGSYMLMIAHGLCSSGLFCLANVSYER 324
Cdd:PRK12649 285 GMITMVLAGFLAFRQTDIKAILAYSTISQ----LAYLMTMYGYttyhepglGVAAATFHLLNHATFKACLFLVAGIVAHE 360
|
250 260 270
....*....|....*....|....*....|....*...
gi 598323954 325 LGSRSMLINKGLLNFMPaMTLWWFLLSSANMAAPPTLN 362
Cdd:PRK12649 361 AATRDIRKLGGLRKEMP-ITFIVASIAALAMAGIPPLN 397
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
17-315 |
8.16e-04 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 41.47 E-value: 8.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 17 INNMYWMVqIMLFFISFIFLLMNNFMNYWSEISYFLGCDMLSYGLVLLsLWICSLMLLASESINKYNNYKNLFLLNIVIL 96
Cdd:TIGR01770 34 LKNLSYIV-LLSALVSLFLTLQYAAYLFTGFSFFIVDNFALLIKLILL-LSTLLTFFFALSYLSKEKINKFEFYILLLFA 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 97 LLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNF----YL 172
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFedllLF 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 173 MNNFMFNYDLLYFCL---LCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAgIMLKLGGYGLLRVINFLQLMNlkYSFVW 249
Cdd:TIGR01770 192 LSNGMLNISLLLLGIvliLVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFS-IVPKIAIFAVFLRLFLYILFG--FSEAW 268
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 250 ISISLVGGVLV----SLVCLRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSSGLF 315
Cdd:TIGR01770 269 QIFLAIIAFLSmligNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAF 338
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
106-289 |
2.38e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 40.29 E-value: 2.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 106 SMSLFMFYLFFESSLIPTlFLILGWGYQPERLQAGVY-LLFYTLLVSLPMLIGI--FYVMNKTGS------MNFYLMNNF 176
Cdd:PRK12645 129 SDNLIVLYLFWELTSISS-FLLISYWYEREASRYGAQkSMLITVFGGLSMLGGFilLYIMTGSFSiremiaNADEIQNSP 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 177 MFNYDLLYFcLLCAFlVKMPMFLVHLWLPKAhVEAPV-------SGSMILAGIMLklggygllrVINFLQLMNLKYSFVW 249
Cdd:PRK12645 208 LFIPAMILI-LLGAF-TKSAQFPFYIWLPDA-MEAPTpvsaylhSATMVKAGIYL---------VARFTPIFAGSQVWFW 275
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 598323954 250 IsISLVGGVLV---SLVCLRQTDLKALIAYSSVAHMGIVLAGL 289
Cdd:PRK12645 276 T-VTLVGLITLfwgSLNAVKQTDLKGILAFSTVSQLGLIMSLL 317
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
186-286 |
3.87e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 39.68 E-value: 3.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 186 CLLCAFLVKMPMFLVHLWLPKAhVEAPVSGSMILAGIMLKLGGYGLLRvinFLQLMNLKYSFVWIsISLVGG---VLVSL 262
Cdd:PRK08168 205 LLVLAVILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGFVLIR---FAPLLEQAPPARWL-LVLVGLataVLAGL 279
|
90 100
....*....|....*....|....
gi 598323954 263 VCLRQTDLKALIAYSSVAHMGIVL 286
Cdd:PRK08168 280 VMLTRISIKVRLAWSTVAQMGFML 303
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
172-390 |
4.10e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 39.10 E-value: 4.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 172 LMNNFMFNYDLLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGImLKLggYGLLRVINFLQLMNLKYSFVWIS 251
Cdd:MTH00144 75 LIMYNLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTW-QKV--APLFLLSNFLDLYWLAYLLCVIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 252 I--SLVGGVLVslvcLRQTDLKALIAYSSVAHMGIVLAGLltmtywgLCGSYMLMIAHGLCSSGLFCLANVSYERLGSRS 329
Cdd:MTH00144 152 VlsALVGSIGG----LNQTQVRALLAYSSISHTGWMLVAI-------LHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSM 220
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 598323954 330 MLINKGLLNFMPAMTLWWFLLSSANMaaPPTLNLLGEISLLNSIVSWSWISMIMLSFLSFF 390
Cdd:MTH00144 221 KDLGSLKPSYKTGLSIISLLLSLGGL--PPFLGFCSKLLVLISSMESSPLLLILLLLLGSL 279
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
105-396 |
4.87e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 38.86 E-value: 4.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 105 SSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYVMNKTGSMNFYLMN--------NF 176
Cdd:MTH00196 11 SSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINlvlnsgqsFS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 177 MFNYDLLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAgIMLKLGGYGLLRVINflqlMNLKYSFVWISISLVG 256
Cdd:MTH00196 91 SVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLGIFSILVSIG----LNVNILLIGGLFSLFV 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 598323954 257 GVLVSLvclRQTDLKALIAYSSVAHMGIVLAGLLTMTYWGLCGSYMLMIAHGLCSsglFCLANVSYERLGSRSMLIN-KG 335
Cdd:MTH00196 166 GAIGAL---NQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMS---ICVFSIILALNVYKNLIIEfSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 598323954 336 LLNFMPAMTLWWFLLSSANMAAPPTLNLLGE-ISLLNSIVSWSWISMIMLSFLSFFSAAYTL 396
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKwLILLSGVVYQYYLIFLLAVFCSVIAGVYYV 301
|
|
| |
