|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-551 |
5.52e-152 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 447.67 E-value: 5.52e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 1 MYMNWSILLAIMSLMFGFMFMMSFYLNNITVIEYIMISINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDK 80
Cdd:MTH00165 3 MCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 81 NKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRIGDVMIILSMIFFVSFG 160
Cdd:MTH00165 83 NINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 161 SFDFLSF------NKVELICGILILVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFEVKIF 234
Cdd:MTH00165 163 SWNFIFYldfmknSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 235 STILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFYGV 314
Cdd:MTH00165 243 SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 315 QDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFYSKDLIVEFFFFKVNNILLIILFILGVMFTLLYCMRLIYELLLK 394
Cdd:MTH00165 323 QDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 395 GI-LSMSIYSSSFSYYMVFPILMLCFLVLISGNLLFWFSNPNLSLIFISKFPKLFMLVFMLMLLMVFKILNK-------N 466
Cdd:MTH00165 403 DFnLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLmslsynlK 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 467 FLNLLANLDFFYKIWFLSSLTSYVMLAGSKPILK--SSISDWTWMENLGPKMINNSMENMFNLNFWVEKQNLSKILLVIM 544
Cdd:MTH00165 483 SLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSlsLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFL 562
|
....*..
gi 1125813690 545 TMIMIIL 551
Cdd:MTH00165 563 LWMIILL 569
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
1-551 |
1.17e-132 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 397.68 E-value: 1.17e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 1 MYMNWSILLAIMSLMFGFMFMMSFYLNNITVIEYIMISINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDK 80
Cdd:MTH00151 3 MSSLSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDP 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 81 NKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRIGDVMIILSMIFFVSFG 160
Cdd:MTH00151 83 FLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 161 --SFDFLSFNKVELICGILILVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFS-YLFEVKIFSTI 237
Cdd:MTH00151 163 hwSILSMWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFpFLSSSSGFSSF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 238 LIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDI 317
Cdd:MTH00151 243 LLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDI 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 318 RMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFYSKDLIVEFFFFKVNNILLIILFILGVMFTLLYCMRLIYELLLKGIL 397
Cdd:MTH00151 323 RLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMK 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 398 SMSIYSSSFSYYMV-FPILMLCFLVLISGNLLFWFSNPNLSLIFISKFPKLFMLVFML---MLLMVFKILNKNFLNLLAN 473
Cdd:MTH00151 403 SSSLSSKSDEDFYVsLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILlglFLSFGFWDSGFSSSKMVKL 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 474 LDFFYKIWFLSSLTSYVMLAGSKPILKSSIS--DWTWMENLGPKMINNSMENMFNLNFWVEKQNLSKILLVIMTMIMIIL 551
Cdd:MTH00151 483 SFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKslDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLV 562
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
1-551 |
4.73e-113 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 347.40 E-value: 4.73e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 1 MYMNWSILLAIMSLMFGFMFMMSFYLNNITVIEYIMISINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDK 80
Cdd:MTH00209 1 FKKMQMFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 81 NKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRIGDVMIILSMIFFVSFG 160
Cdd:MTH00209 81 FKKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 161 SFDFLSFNKVE---LICGILILVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFS-YLFEVKIFST 236
Cdd:MTH00209 161 NWNIFYLNFNSnlgSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFpSLFSSPFFSM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 237 ILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQD 316
Cdd:MTH00209 241 SLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 317 IRMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFYSKDLIVEFFFFKVNNILLIILFILGVMFTLLYCMRLIYELLLKGI 396
Cdd:MTH00209 321 IRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPN 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 397 -LSMSIYSSSFSYYMVFPILMLCFLVLISGNLLFWFSNPNLSLIFISKFPKLFMLVFMLMLLMVFKILNKNFLNLLANLD 475
Cdd:MTH00209 401 sSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKGYK 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 476 FFY---KIWFLSSLTSYVMLAGSKPILKSSIS--DWTWMENLGPKMINNSMENMFNLNFWVEKQNLSKILLVIMTMIMII 550
Cdd:MTH00209 481 VNYflsQMWFLPDLSSQPVNKFTMKLSKTMLKllDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGV 560
|
.
gi 1125813690 551 L 551
Cdd:MTH00209 561 I 561
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
6-551 |
1.31e-104 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 325.57 E-value: 1.31e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 6 SILLAIMSLMFGFMFMMSFYLNNITVIEYIMISINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSF 85
Cdd:MTH00207 11 SYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRF 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 86 CMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRIGDVMIILSMIFFVSFGSFDFL 165
Cdd:MTH00207 91 ISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSIT 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 166 SF--NKVELICGILILVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRF-SYLFEVKIFSTILIKVS 242
Cdd:MTH00207 171 NMwqTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFyPFLSSTYWFNPALLLTA 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 243 VITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGN 322
Cdd:MTH00207 251 SLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGN 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 323 FFKFSPVISSCMMISFLSLMGFPFIGGFYSKDLIVEFFFFKVNNILLIILFILGVMFTLLYCMRLIYELLLKGILSMSIY 402
Cdd:MTH00207 331 LTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYH 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 403 SSSFSYYMVF-PILMLCFLVLISGNLLFWFSNPNLSLIFIS---KFPKLFMLVFMLMLLMVFKILNKNFLNLLANLD--- 475
Cdd:MTH00207 411 HLEDEDKSLTtPMLLLTLGAITSGSALNWWLPTPQEEPILPlqyKLLPLLVVTLGALLAWLFTTPNITKTPLLINNPlsh 490
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1125813690 476 -FFYKIWFLSSLTSYVMLAGSKPILKSSIS--DWTWMENLGPKMINNSMENMFNLNFWVEKQNLSKILLVIMTMIMIIL 551
Cdd:MTH00207 491 fASCLMWFLVPLSSQFIMSTPMNLSHNYLKllDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMMSFVLLTIII 569
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
27-551 |
1.66e-91 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 292.24 E-value: 1.66e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 27 NNITVIEYIMISINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMF 106
Cdd:MTH00211 54 LETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLF 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 107 TIILGWDGLGLVSYCLVIYYQSINSYNSGMMT-IISNRIGDVMIILSMIFFVSFGS----FDFLSFNKVELICGILILVA 181
Cdd:MTH00211 134 QLFIGWEGVGIMSFLLISWWYGRSDANTAALQaVIYNRIGDIGLLLSMVWLLLNLNsweiSQLFILNLDLTLFLLGLLLA 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 182 GLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFEVKIFS-TILIKVSVITMLMAGLNAFFEMDFK 260
Cdd:MTH00211 214 AMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLIlGAVLLLGALTMLFGALCALTQNDIK 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 261 KVIAFSTLSQLSMMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGNFFKFSPVISSCMMISFLS 340
Cdd:MTH00211 294 KIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLA 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 341 LMGFPFIGGFYSKDLIVEFFFFKVNNILLIILFILGVMFTLLYCMRLIY-ELLLKGILSMSIYSSSFSYYMVFPILMLCF 419
Cdd:MTH00211 374 LMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFlSLGGYPRFLSLSPINENYKLLKNPLKRLAL 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 420 LVLISGNLLFWFSNPNLSLIF-ISKFPKLFMLVFMLMLLMVFKILNKNFLNLLANLDFFYKIWFLSS------LTSYVML 492
Cdd:MTH00211 454 GSILAGFIITSNLPPEKPEILsLPFLLKLMPLLVTIVGLLLGLELVNLTHKQLKTSTLSFSNMLGYYppiihrLLPKLSL 533
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 1125813690 493 AGSKPIlKSSISDWTWMENLGPKMINNSMENMFNLNFWVEkQNLSKILLVIMTMIMIIL 551
Cdd:MTH00211 534 KWGQTL-STHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQ-QGLIKSYLALLLLSLLLI 590
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
37-389 |
3.68e-88 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 283.97 E-value: 3.68e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 37 ISINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLG 116
Cdd:COG1009 65 IPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 117 LVSYCLV-IYYQSINSYNSGMMTIISNRIGDVMIILSMIF-FVSFGSFDF----------LSFNKVELICgILILVAGLT 184
Cdd:COG1009 145 LCSYLLIgFWYEKPSARRAARKAFLVTRVGDLGLLLGILLlGAIAGTLNFsellaaaptiLSSPLLTLIL-LLLLLGAFG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 185 KSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFE-VKIFSTILIKVSVITMLMAGLNAFFEMDFKKVI 263
Cdd:COG1009 224 KSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFAlSPVWLTVVAIIGAITALFAALIALAQTDIKRVL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 264 AFSTLSQLSMMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFyGVQDIRMLGNFFKFSPVISSCMMISFLSLMG 343
Cdd:COG1009 304 AYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAG 382
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1125813690 344 FPFIGGFYSKDLIVE-FFFFKVNNILLIILFILGVMFTLLYCMRLIY 389
Cdd:COG1009 383 IPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFF 429
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
37-388 |
2.63e-72 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 242.37 E-value: 2.63e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 37 ISINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLG 116
Cdd:PRK06590 69 ISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVG 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 117 LVSYCLVIYYQSINSYN-SGMMTIISNRIGDV-MIILSMIFFVSFGSFDF------------LSFNKVELICgILILVAG 182
Cdd:PRK06590 149 LCSYLLIGFWYKKPSAGaAAMKAFIVNRVGDVgLALGIFLLFAEFGSLNYdevfaaapqffgLGWSALTLIC-LLLFIGA 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 183 LTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFE----VKIFSTIlikVSVITMLMAGLNAFFEMD 258
Cdd:PRK06590 228 MGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFElspeALLFVAI---VGAVTALFAAFIGLVQTD 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 259 FKKVIAFSTLSQLSMMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGNFFKFSPVISSCMMISF 338
Cdd:PRK06590 305 IKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGT 384
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1125813690 339 LSLMGFPFIGGFYSKDLIVEFFFFKvNNILLIILFILGVMFTLLYCMRLI 388
Cdd:PRK06590 385 LALIGIPPFAGFFSKDEILEAAFAN-GHINLFVAGLVGAFLTAFYSFRLI 433
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
29-389 |
1.01e-71 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 240.65 E-value: 1.01e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 29 ITVIEYIMISINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTI 108
Cdd:TIGR01974 60 FTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQL 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 109 ILGWDGLGLVSYCLV-IYYQSINSYNSGMMTIISNRIGDVMIILSMIF-FVSFGSFDF---------LSFNKVELICgIL 177
Cdd:TIGR01974 140 FFGWEGVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLiFWYFGTLNFqevfalapgAFFSALTLIC-LL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 178 ILVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFE-VKIFSTILIKVSVITMLMAGLNAFFE 256
Cdd:TIGR01974 219 LFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFElSPTALYLVTIIGAITALFAATVALVQ 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 257 MDFKKVIAFSTLSQLSMMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGNFFKFSPVISSCMMI 336
Cdd:TIGR01974 299 NDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLI 378
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1125813690 337 SFLSLMGFPFIGGFYSKDLIVEFFFFKVNNILLIILFILGVMFTLLYCMRLIY 389
Cdd:TIGR01974 379 GSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIF 431
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
27-389 |
9.08e-70 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 235.06 E-value: 9.08e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 27 NNITVIEYIMISINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMF 106
Cdd:MTH00004 59 TESITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMF 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 107 TIILGWDGLGLVSYCLVIYYQSINSYN-SGMMTIISNRIGDVMIILSMIFFVS-FGSFDF---LSFNKVELICGILILVA 181
Cdd:MTH00004 139 QLFIGWEGVGIMSFLLIGWWSGRAEANtAALQAIIYNRIGDIGLILSMAWLAMtLNTWEIqqlFSPTQTPTLPLLGLILA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 182 GLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFEV-KIFSTILIKVSVITMLMAGLNAFFEMDFK 260
Cdd:MTH00004 219 ATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNnQTALTICLCLGALTTLFAATCALTQNDIK 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 261 KVIAFSTLSQLSMMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGNFFKFSPVISSCMMISFLS 340
Cdd:MTH00004 299 KIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLA 378
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1125813690 341 LMGFPFIGGFYSKDLIVEFFFFKVNNILLIILFILGVMFTLLYCMRLIY 389
Cdd:MTH00004 379 LMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMIL 427
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
28-551 |
9.30e-69 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 232.94 E-value: 9.30e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 28 NITVIEYIMISINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFT 107
Cdd:MTH00208 83 NINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFL 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 108 IILGWDGLGLVSYCLVIYYQSINSYN-SGMMTIISNRIGDVMII----LSMIFFVSFGSFDFLSFNKVE----LICGILI 178
Cdd:MTH00208 163 LFIGWEGVGFLSFLLISWWTTRNDANsSALQAVIYNRIGDIGIIlflsLSLINFNSWNLNEILSLNNSNsfliNILLFGI 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 179 LVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFE-VKIFSTILIKVSVITMLMAGLNAFFEM 257
Cdd:MTH00208 243 LLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISnSPWFLSLCLILGSLTALFAASTAISQH 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 258 DFKKVIAFSTLSQLSMMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGNFFKFSPVISSCMMIS 337
Cdd:MTH00208 323 DIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILG 402
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 338 FLSLMGFPFIGGFYSKDLIVEFFFFKVNNILLIILFILGVMFTLLYCMRLIYELLLKGILSMSIYSSS-FSYYMVFPILM 416
Cdd:MTH00208 403 SLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISeENPNLTNPLLR 482
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 417 LCFLVLISGNLL--FWFSNPNLSLIFISKFPKLF------MLVFMLMLLMVFKILNKNFLNLLANLDFFYKIW--FLSSL 486
Cdd:MTH00208 483 LAIGTIISGWFFsnFVFNLPPLTLPLILKSLPLIvtiigaAFSFSFLLSLSSNPINSNFFSFLSNQWFFVNIShsIIISF 562
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1125813690 487 TSYVMLAGSKPILkssisDWTWMENLGPKMINNSMENMFNLNFWVEKQNLSKILLVIMTMIMIIL 551
Cdd:MTH00208 563 SFFTSLFGSTRTL-----DRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLIL 622
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
30-521 |
6.59e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 227.48 E-value: 6.59e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 30 TVIEYIMISINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTII 109
Cdd:MTH00066 60 ITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 110 LGWDGLGLVSYCLV-IYYQSINSYNSGMMTIISNRIGDVMIILSMIFFVSF-GSFDF---LSFNKVELICGILILVAGLT 184
Cdd:MTH00066 140 IGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNtNSWELqqiFLLNDNSTLPLLGLILAAAG 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 185 KSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFEV-KIFSTILIKVSVITMLMAGLNAFFEMDFKKVI 263
Cdd:MTH00066 220 KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENnQTALTICLCLGALTTLFTAACALTQNDIKKIV 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 264 AFSTLSQLSMMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGNFFKFSPVISSCMMISFLSLMG 343
Cdd:MTH00066 300 AFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTG 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 344 FPFIGGFYSKDLIVEFFFFKVNNILLIILFILGVMFTLLYCMRLIYELLLKGILSMSIYSSSFSYYMVF-PILMLCFLVL 422
Cdd:MTH00066 380 TPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIInPIKRLAWGSI 459
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 423 ISGNLLFWFSNPNLSLI----FISKFPKLFMLVF-----MLMLLMVFKILNKNFLNLLANLDFFYKIWFLSSLTSYVMLA 493
Cdd:MTH00066 460 IAGLLIIFNILPMKPQIltmpTFMKLAALLVTLLglliaLDLAKITSKTTPKTKMHSFSNLLAFFPTIIHRLSPKTNLNS 539
|
490 500
....*....|....*....|....*...
gi 1125813690 494 GSKpiLKSSISDWTWMENLGPKMINNSM 521
Cdd:MTH00066 540 GQN--IATHLTDMTWYEKSGPKGLTNQQ 565
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
46-389 |
4.06e-64 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 220.33 E-value: 4.06e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 46 FYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLV-I 124
Cdd:MTH00020 74 FGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 125 YYQSINSYNSGMMTIISNRIGDVMIILSMIF-FVSFGSFDFLS---------FNKVELICgILILVAGLTKSAQIPFSAW 194
Cdd:MTH00020 154 WLTRIEANKAAIKAMLVNRVGDIGLLLAMFLlWDRFGSLDFSSvfnmvvsapSSDITLIC-LFLFIGAVGKSAQLGLHTW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 195 LPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFEVKIFSTILIK-VSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSM 273
Cdd:MTH00020 233 LPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTiVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGY 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 274 MMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFYSK 353
Cdd:MTH00020 313 MVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSK 392
|
330 340 350
....*....|....*....|....*....|....*.
gi 1125813690 354 DLIVEFFFFKVNNILLIILFILGVMFTLLYCMRLIY 389
Cdd:MTH00020 393 DLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIY 428
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
44-394 |
2.27e-61 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 210.93 E-value: 2.27e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 44 LKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLV 123
Cdd:MTH00095 37 LSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 124 IYYQSINSYNSGMMTIISNRIGDvMIILSMIFFVSFGSFDFLSFNKVELICGILILVAGLTKSAQIPFSAWLPAAMAAPT 203
Cdd:MTH00095 117 LFYNNWDSNSGAMNTALTNRIGD-FFIFLFFSGFIFSSYYFFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPT 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 204 PVSSLVHSSTLVTAGVYILMRFSYLFEVKIFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMIILSLGKM 283
Cdd:MTH00095 196 PVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLS 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 284 ELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFYSKDLIVEFFFFK 363
Cdd:MTH00095 276 FVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFN 355
|
330 340 350
....*....|....*....|....*....|.
gi 1125813690 364 VNNILLIILFILGVMFTLLYCMRLIYELLLK 394
Cdd:MTH00095 356 NYMIFFSLMFFFSVFLTFGYSYRLWKSFFLS 386
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
37-393 |
8.86e-61 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 211.25 E-value: 8.86e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 37 ISINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLG 116
Cdd:MTH00108 69 MTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVG 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 117 LVSYCLVIYYQSINSYNSG-MMTIISNRIGDVMIILSMIFFVS-FGSFD----FLSFNKVELICGILILVAGLTKSAQIP 190
Cdd:MTH00108 149 IMSFLLIGWWYGRTDANTAaLQAILYNRIGDIGFILAMAWFLLnLNSWDlqqiFMLNPNNSNLPLMGLLLAATGKSAQFG 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 191 FSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFEV-KIFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLS 269
Cdd:MTH00108 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENnKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 270 QLSMMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIGG 349
Cdd:MTH00108 309 QLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1125813690 350 FYSKDLIVEFFFFKVNNILLIILFILGVMFTLLYCMRLIYELLL 393
Cdd:MTH00108 389 FYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALL 432
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
46-389 |
4.72e-60 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 209.48 E-value: 4.72e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 46 FYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLV-I 124
Cdd:MTH00210 74 FGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 125 YYQSINSYNSGMMTIISNRIGDVMIILSMIF-FVSFGSFDFLSF----------NKVELICgILILVAGLTKSAQIPFSA 193
Cdd:MTH00210 154 WLTRIKANKAAIKAMLINRVGDIGLVLAMIMiLKEFGTLEFSTIssllvtninkESLTIIC-LLLFIGAVGKSAQLGLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 194 WLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFEVKIFSTILIKV-SVITMLMAGLNAFFEMDFKKVIAFSTLSQLS 272
Cdd:MTH00210 233 WLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTIlGALTAFFAATVGVVQNDLKKVIAYSTCSQLG 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 273 MMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFYS 352
Cdd:MTH00210 313 YMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYS 392
|
330 340 350
....*....|....*....|....*....|....*..
gi 1125813690 353 KDLIVEFFFFKVNNILLIILFILGVMFTLLYCMRLIY 389
Cdd:MTH00210 393 KDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIY 429
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
37-358 |
2.27e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 204.68 E-value: 2.27e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 37 ISINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLG 116
Cdd:MTH00137 73 MNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 117 LVSYCLV-IYYQSINSYNSGMMTIISNRIGDVMIILSMIFFV-SFGSFD----FLSFNKVELICGIL-ILVAGLTKSAQI 189
Cdd:MTH00137 153 IMSFLLIgWWYGRADANTAALQAVIYNRVGDIGLILAMAWMAtNLNSWEiqqiFALSKDFDLTLPLLgLILAATGKSAQF 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 190 PFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFEV-KIFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTL 268
Cdd:MTH00137 233 GLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENnQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTS 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 269 SQLSMMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIG 348
Cdd:MTH00137 313 SQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLA 392
|
330
....*....|
gi 1125813690 349 GFYSKDLIVE 358
Cdd:MTH00137 393 GFFSKDAIIE 402
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
48-365 |
1.57e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 200.96 E-value: 1.57e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 48 FLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLVIYYQ 127
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 128 S-INSYNSGMMTIISNRIGDVMIILSMIF-FVSFGSFDFLSFNKVEL-----------------------ICGILILVAG 182
Cdd:MTH00032 156 TrIQANKAAIKAIVVNRVGDVGVILGMVLiYKTIGSLDFLTFNGGSVgsgimdrgyygggayesplapfaIIGILLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 183 LTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFEVKIFSTILIKV-SVITMLMAGLNAFFEMDFKK 261
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIfGALTAFFAATVGLVQNDLKK 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 262 VIAFSTLSQLSMMMIILSL-GKMELSFFHLLMHAMFKSMLFLCAGFVIHSF-YGVQDIRMLGNFFKFSPVISSCMMISFL 339
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTtVDEQDMRKMGGLIHSIPFTYTMMLIGSF 395
|
330 340
....*....|....*....|....*.
gi 1125813690 340 SLMGFPFIGGFYSKDLIVEFFFFKVN 365
Cdd:MTH00032 396 SIMGLPYLTGFYSKDLILELTYSGRN 421
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
38-356 |
6.22e-51 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 185.23 E-value: 6.22e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 38 SINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGL 117
Cdd:PRK07376 77 SAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGM 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 118 VSYCLV-IYYQSINSYNSGMMTIISNRIGDVMIILSMI-FFVSFGSFDF----------LSFNKVE----LICGILILVA 181
Cdd:PRK07376 157 CSYLLVgFWYDRKGAADAAQKAFVVNRVGDFGLLLGILgLFWATGSFDFdgiadrlselVSSGAVSgwlaLLLCILVFLG 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 182 GLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFE-VKIFSTILIKVSVITMLMAGLNAFFEMDFK 260
Cdd:PRK07376 237 PMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEqFPAVMTVIAWTGAITAFLGASIALTQNDIK 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 261 KVIAFSTLSQLSMMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFYGV--------QDIRMLGNFFKFSPVISS 332
Cdd:PRK07376 317 KGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVvghdpvlaQDMRLMGGLRKYMPITAI 396
|
330 340
....*....|....*....|....
gi 1125813690 333 CMMISFLSLMGFPFIGGFYSKDLI 356
Cdd:PRK07376 397 TFLIGCLAISGIPPFAGFWSKDEI 420
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
40-388 |
2.34e-49 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 183.32 E-value: 2.34e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 40 NSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVS 119
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 120 YCLVIyyQSINSYNSGMM-TIISNRIGDVMIILSM-IFFVSFGSF--------DFLSFNKVEL-ICGILILVAGLTKSAQ 188
Cdd:PRK12650 147 FFLIA--RSGSGGEAGSIrTLILTFFGGLTLLAAVaIAATQTGTTslsgilhsDVWAEKPGLTtVVAVLIAVAAFTKSAQ 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 189 IPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFE-VKIFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFST 267
Cdd:PRK12650 225 FPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHdVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYST 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 268 LSQLSMMMIILSLGK---MELSFFHLLMHAMFKSMLFLCAGFVIHSfYGVQDIRMLGNFFKFSPVISSCMMISFLSLMGF 344
Cdd:PRK12650 305 VSQLGWIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAV 383
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1125813690 345 PFIGGFYSKDLIVEFF----FFKVNNILLIILFILGVMFTLLYCMRLI 388
Cdd:PRK12650 384 PPLFGFVSKEGMLTAFleapGGNAGVVLLLVGAALGAVFTFAYSARLV 431
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
46-358 |
9.98e-46 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 166.09 E-value: 9.98e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 46 FYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLVIY 125
Cdd:COG0651 70 IVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVAL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 126 YQSINSYNSGMMTIISNRIGDVMIILSMIF-FVSFGSFDFLSF--------NKVELICGILILVAGLTKSAQIPFSAWLP 196
Cdd:COG0651 150 GGTKEALRAGLKYLILNLVGSALFLLGVGLlYGATGTLNMADLaarlaeldPGLLLAAFALLLVGFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 197 AAMA-APTPVSSLVhSSTLVTAGVYILMRFSYLF----EVKIFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQL 271
Cdd:COG0651 230 DAYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLfgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 272 SMMMIILSLGK---MELSFFHLLMHAMFKSMLFLCAGFVIHSfYGVQDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIG 348
Cdd:COG0651 309 GYILLGLGLGTplgLAGALFHLLNHALAKALLFLAAGAIERA-TGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
|
330
....*....|
gi 1125813690 349 GFYSKDLIVE 358
Cdd:COG0651 388 GFVSKWLLLQ 397
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
37-387 |
4.88e-43 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 160.81 E-value: 4.88e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 37 ISINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLG 116
Cdd:MTH00063 30 LSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLG 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 117 LVSYCLVIYYQSINSYNSGMMTIISNRIGDVMIILSMIFFVSFGSFDFLsfnkveliCGILILVAGLTKSAQIPFSAWLP 196
Cdd:MTH00063 110 VVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSFL--------CCLFFFLIVFTKSASFPFISWLL 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 197 AAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFEVKIFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMI 276
Cdd:MTH00063 182 EAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVL 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 277 ILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFYSKDLI 356
Cdd:MTH00063 262 YLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILYGSWNLFYLFLLVLGLSGVPFIGVFFSKHFL 341
|
330 340 350
....*....|....*....|....*....|.
gi 1125813690 357 VEFFFFKVNNILLIILFILGVMFTLLYCMRL 387
Cdd:MTH00063 342 LSSFSSVVFNVSLLLVVILCVFLSYLYSFRL 372
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
25-389 |
2.29e-42 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 162.32 E-value: 2.29e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 25 YLNNITVIEYIMISINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPN 104
Cdd:TIGR00940 48 YTASGGVLHYTIDWVPELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDN 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 105 MFTIILGWDGLGLVSYCLVIYY--QSINSYNSGMMTIISNRIGDVMIILSMIFFVSFGSF---------DFLSFNKVELI 173
Cdd:TIGR00940 128 LILLYVFWELTSIVSFLLISYWhhRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFsidaviasaDAIRNSPLFGT 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 174 CGILILVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFE-VKIFSTILIKVSVITMLMAGLN 252
Cdd:TIGR00940 208 AMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAgTEAWFWIVGLAGLITLLWGSYF 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 253 AFFEMDFKKVIAFSTLSQLSMMMIILSLGKMELSF----------------FHLLMHAMFKSMLFLCAGFVIHSfYGVQD 316
Cdd:TIGR00940 288 AIFQQDLKGILAFSTISQLGLIMVLLGLGSPSYHYqgddskiyalaavaavFHLINHATFKGSLFMAAGIIDHE-TGTRD 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 317 IRMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFYSKDLIVE---------FFFFKVNNILLIILFILGVMFTLLYCMRL 387
Cdd:TIGR00940 367 IRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAeaitahlvnPFDTVTLGYLFPYVATVASVFTFVYSLRF 446
|
..
gi 1125813690 388 IY 389
Cdd:TIGR00940 447 IH 448
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
39-358 |
6.55e-41 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 157.77 E-value: 6.55e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 39 INSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLV 118
Cdd:PRK12647 51 VPSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSIT 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 119 SYCLVIY-YQSINSYNSGMMTIISNRIGDVMIILSMIF--FVSfGSFDFLSF-NKVELICG--------ILILVAGLTKS 186
Cdd:PRK12647 131 SFLLIGFnHEREAARRAALQALLVTGGGGLALLAGLILlgNVT-GTYSLSELlASGDVIREhplylailLLVLGGAFTKS 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 187 AQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSY-LFEVKIFSTILIKVSVITMLMAGLNAFFEMDFKKVIAF 265
Cdd:PRK12647 210 AQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPvLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAY 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 266 STLSQLSMMMIILSLGK---MELSFFHLLMHAMFKSMLFLCAGFVIHSfYGVQDIRMLGNFFKFSPVISSCMMISFLSLM 342
Cdd:PRK12647 290 STVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMA 368
|
330
....*....|....*.
gi 1125813690 343 GFPFIGGFYSKDLIVE 358
Cdd:PRK12647 369 GLPPLFGFLAKELIYE 384
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
5-357 |
2.35e-40 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 152.44 E-value: 2.35e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 5 WSILLAIMSLMFGFMFMMSFYLNNITVIEYIMISINSLDLkFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNT------ 78
Cdd:PRK06525 29 LGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGDVAL-FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPgnrehp 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 79 -DKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRIGDV-MIILSMIFF 156
Cdd:PRK06525 108 vHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLgLYLAAATLF 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 157 VSFGSFDFLSFNKVE----LICGILILVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFsYLFEVK 232
Cdd:PRK06525 188 LQTGTFALSALSGLHgslkYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA-IQSMGP 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 233 I---FSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMIILSLGKM------ELSFFHLLMHAMFKSMLFLC 303
Cdd:PRK06525 267 IphvIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLV 346
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1125813690 304 AGFVIHSFyGVQDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFYSKDLIV 357
Cdd:PRK06525 347 AGALSYSC-GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
39-389 |
2.21e-39 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 153.93 E-value: 2.21e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 39 INSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTD-KNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGL 117
Cdd:PRK12644 61 IPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTV 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 118 VSYCLVIYY-QSINSYNSGMMTIISNRIGDV-----MIILSmiffVSFGSFdflsfnkveLICGI--------------- 176
Cdd:PRK12644 141 LSFLLIGHYaERAASRRAALQALLVTTAGGLamlvgIIILG----QAAGTY---------RLSELladpptgpavsvavv 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 177 LILVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLF-EVKIFSTILIKVSVITMLMAGLNAFF 255
Cdd:PRK12644 208 LILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFaDVPVWRPTVLVLGLATMLLGGWRALR 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 256 EMDFKKVIAFSTLSQLSMMMIILSLGKMELSFFHLLM---HAMFKSMLFLCAGFVIHSfYGVQDIRMLGNFFKFSPVISS 332
Cdd:PRK12644 288 QHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMllaHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAV 366
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1125813690 333 CMMISFLSLMGFPFIGGFYSKDLIVEFFFFKVNNILLIILFILGV----MFTLLYCMRLIY 389
Cdd:PRK12644 367 VAALAAASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPVVLAGIvlgsILTVAYSLRFLW 427
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
103-358 |
7.11e-39 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 143.99 E-value: 7.11e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 103 PNMFTIILGWDGLGLVSYCLVIYY-QSINSYNSGMMTIISNRIGDVMIILSMIFFVSFGS----------FDFLSFNKVE 171
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGtlsfdelskaLTGGLNSSGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 172 LICGILILVAGLTKSAQIPFSAWLPAA-MAAPTPVSSLVhSSTLVTAGVYILMRFSYLFEVK--IFSTILIKVSVITMLM 248
Cdd:pfam00361 82 LLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSspFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 249 AGLNAFFEMDFKKVIAFSTLSQLSMMMIILSLGK---MELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGNFFK 325
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTiygIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 1125813690 326 FSPVISSCMMISFLSLMGFPFIGGFYSKDLIVE 358
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
39-355 |
1.80e-38 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 150.68 E-value: 1.80e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 39 INSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDK-NKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGL 117
Cdd:PRK12646 65 MKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSV 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 118 VSYCLVIY-YQSINSYNSGMMTIISNRIGDVMIILSMIFFVS----------FGSFDFLSFNKVELICGILILVAGLTKS 186
Cdd:PRK12646 145 SSFLLISYwYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYImtgtnniteiLGQADHIKNHGLFIPMIFMFLLGAFTKS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 187 AQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFEVK-IFSTILIKVSVITMLMAGLNAFFEMDFKKVIAF 265
Cdd:PRK12646 225 AQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnMYIYIVTFVGLITMLFGSITALKQWDLKGILAY 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 266 STLSQLSMMMIILSLGKM-------ELS----------FFHLLMHAMFKSMLFLCAGFVIHSfYGVQDIRMLGNFFKFSP 328
Cdd:PRK12646 305 STISQLGMIMAMVGIGGGyaqhqqdAIAsiyvfvlfaaLFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFP 383
|
330 340
....*....|....*....|....*..
gi 1125813690 329 VISSCMMISFLSLMGFPFIGGFYSKDL 355
Cdd:PRK12646 384 KMNLVMTIAALSMAGVPFLNGFLSKEM 410
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
39-389 |
4.89e-36 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 143.53 E-value: 4.89e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 39 INSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNK-NSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGL 117
Cdd:PRK12645 65 IPSLGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQlGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSI 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 118 VSYCLVIYY----QSINSYNSGMMTIISNriGDVMIILSMIFFVSFGSFDFL-SFNKVELICG--------ILILVAGLT 184
Cdd:PRK12645 145 SSFLLISYWyereASRYGAQKSMLITVFG--GLSMLGGFILLYIMTGSFSIReMIANADEIQNsplfipamILILLGAFT 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 185 KSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFEVKI--FSTILIkVSVITMLMAGLNAFFEMDFKKV 262
Cdd:PRK12645 223 KSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQvwFWTVTL-VGLITLFWGSLNAVKQTDLKGI 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 263 IAFSTLSQLSMMMIILSLGKMELSF----------------FHLLMHAMFKSMLFLCAGFVIHSfYGVQDIRMLGNFFKF 326
Cdd:PRK12645 302 LAFSTVSQLGLIMSLLGIGAASLHYqgddskiyaaaitaaiFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTI 380
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1125813690 327 SPVISSCMMISFLSLMGFPFIGGFYSKDL-------IVEFFFFKVNNILLII--LFILGVMFTLLYCMRLIY 389
Cdd:PRK12645 381 MPITFTIALIGALSMAGLPPFNGFLSKEMffesmlnATEANLFSLDTWGVLFpvIAWVASVFTFVYSIIFIF 452
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
41-390 |
5.87e-36 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 143.41 E-value: 5.87e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 41 SLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSY 120
Cdd:PRK12648 65 ALGLNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 121 CLVIYYQSINSYNSGM-MTIISNRIGDV-----MIILSMIFfvsfGSFDFlsfNKV----ELICG--------ILILVAG 182
Cdd:PRK12648 145 LLIGYWHHRADARRGArMALTVTGAGGLallagVLLLGHIV----GSYDL---DVVlaagDLIRAhplyppalVLILLGA 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 183 LTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFS-YLFEVKIFSTILIKVSVITMLMAGLNAFFEMDFKK 261
Cdd:PRK12648 218 FTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWpVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKG 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 262 VIAFSTLSQLSMMMIILSLGKmELS----FFHLLMHAMFKSMLFLCAGFVIHSfYGVQDIRMLGNFFKFSPVISSCMMIS 337
Cdd:PRK12648 298 LLAYSTISHLGLITLLLGLGS-PLAavaaIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVA 375
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1125813690 338 FLSLMGFPFIGGFYSKdlivEFFF--------FKVNNILLIILFILGVMFTLLYCMRLIYE 390
Cdd:PRK12648 376 AAAMAGVPLLNGFLSK----EMFFaetldthlLGSLDWLLPVAATLAGAFSVAYSLRFIHD 432
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
39-358 |
1.52e-34 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 138.81 E-value: 1.52e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 39 INSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLV 118
Cdd:PRK12649 67 LPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSIT 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 119 SYCLVIYYQS--INSYNSGMMTIISNRIGDVMIILSMIFFVSFGSFDF------------LSFNKVELICGILILVAGLT 184
Cdd:PRK12649 147 SFMLIGYWRHrpESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIatilqdselienIKGHPLFLITLILIFIGAAA 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 185 KSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFEVKIFSTILIK-VSVITMLMAGLNAFFEMDFKKVI 263
Cdd:PRK12649 227 KSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSgTGMITMVLAGFLAFRQTDIKAIL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 264 AFSTLSQLSMMMIILSLGKME-------LSFFHLLMHAMFKSMLFLCAGFVIHSfYGVQDIRMLGNFFKFSPVISSCMMI 336
Cdd:PRK12649 307 AYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHE-AATRDIRKLGGLRKEMPITFIVASI 385
|
330 340
....*....|....*....|..
gi 1125813690 337 SFLSLMGFPFIGGFYSKDLIVE 358
Cdd:PRK12649 386 AALAMAGIPPLNGFLSKEMFYE 407
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
40-356 |
9.40e-33 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 133.09 E-value: 9.40e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 40 NSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVS 119
Cdd:CHL00025 79 NDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCS 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 120 YCLV-IYYQSINSYNSGMMTIISNRIGDVMIILSMI-FFVSFGSFDF----------LSFNKVEL----ICGILILVAGL 183
Cdd:CHL00025 159 YLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGILgFYWITGSFEFrdlfeifnnlIYNNEVNLlfatLCAFLLFLGPV 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 184 TKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFEVKIFSTILIK-VSVITMLMAGLNAFFEMDFKKV 262
Cdd:CHL00025 239 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISlIGIITALLGATLALAQKDIKRG 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 263 IAFSTLSQLSMMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSFYGV--------QDIRMLGNFFKFSPVISSCM 334
Cdd:CHL00025 319 LAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIvgyspdksQNMVLMGGLRKYMPITKTTF 398
|
330 340
....*....|....*....|..
gi 1125813690 335 MISFLSLMGFPFIGGFYSKDLI 356
Cdd:CHL00025 399 LLGTLSLCGIPPLACFWSKDEI 420
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-392 |
2.15e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 124.22 E-value: 2.15e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 51 DWVSSMFSMVVLIISSMVVMYSNSYmnTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLVIYYQSIN 130
Cdd:PRK08375 76 DSLSALFLLVTSILAIAALLYAIGY--GEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 131 SYNSGMMTIISNRIGDVMIILSMIF-FVSFGSFDF------LSFNKVELICGILILVAGLTKSAQIPFSAWLPAAMAAPT 203
Cdd:PRK08375 154 ALAAARKYLIVGLIGSTFLLIGVGLlYGVTGTLNMadlagaLAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 204 PVSSLVHSSTLVTAGVYILMRFSY------LFEVKIFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMI- 276
Cdd:PRK08375 234 PVVTALLSGLVTKVAVYALIRIYFtvfggdFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLg 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 277 --ILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSfYGVQDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFYSKD 354
Cdd:PRK08375 314 laLLTPLALAAGLLHLLHHALMKGALFLAAGAIEVT-YGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKW 392
|
330 340 350
....*....|....*....|....*....|....*...
gi 1125813690 355 LIVeFFFFKVNNILLIILFILGVMFTLLYCMRLIYELL 392
Cdd:PRK08375 393 YLV-VGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAF 429
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-439 |
2.37e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 112.76 E-value: 2.37e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 51 DWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLVIYYQS-I 129
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDrG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 130 NSYNSGMMTIISNRIGDVMIILSMIF-FVSFGSFDF---------LSFNKVE----------LICGILILVAGLTKSAQI 189
Cdd:PRK12667 161 DAVEAAIKYALIGAVGTTLYFLALAFlYATFGTLNMadlsakirgLSFPLTGglagnpplalGVALALALWAFTIKAAIF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 190 PFSAWLPAAM-AAPTPVSSLVhSSTLVTAGVYILMRFSYLF---------EVKIFSTILIKVSVITMLMAGLNAFFEMDF 259
Cdd:PRK12667 241 PNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIfgispslidFRAALSPILIILGAVSAIIGALMMVVQKDV 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 260 KKVIAFSTLSQLSMMMIILSLGK---MELSFFHLLMHAMFKSMLFLCAGFVIHSfYGVQDIRMLGNFFKFSPVISSCMMI 336
Cdd:PRK12667 320 KRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHA-AGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 337 SFLSLMGFPFIGGFYSKDLIVEfFFFKVNNILLIILFILGVMFTLLYCMRLIYELLLKGILSMSIYSSSFSYYMVFPILM 416
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFN-ALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPKSGEEVEHKESPSMSVVILV 477
|
410 420
....*....|....*....|...
gi 1125813690 417 LCFLVLISGNLLFWFSNPNLSLI 439
Cdd:PRK12667 478 LALAVLILGILALFLPEILDSLI 500
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
44-361 |
1.08e-24 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 108.28 E-value: 1.08e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 44 LKFYFLFDWVSSMFSMVVLIISSMVVMYSNSY---MNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSY 120
Cdd:PRK08667 69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 121 CLVIY-YQSINSYNSGMMTIISNRIGDVMIILSMI-FFVSFGSFDF--LSFNKVELICGILILVAGL-TKSAQIPFSAWL 195
Cdd:PRK08667 149 FLVMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIvLFIQTGSFELspLGASAGILSLVFLLLFLGFgIKAGIIPFHKWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 196 PAAM-AAPTPVSSLVhSSTLVTAGVYILMRF--SYLFEVKIFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLS 272
Cdd:PRK08667 229 PYAHpASPSNVSALM-SGVMLKVAVYGLVRFlmDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIG 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 273 MMMI--------------ILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSfYGVQDIRMLGNFFKFSPVISSCMMISF 338
Cdd:PRK08667 308 IILMgiglyvifgvygldTLALLALGGALFHSLNHALFKSLLFLTAGSVVHA-TGTRNIEKMGGLVKLMPYTSALFLVGA 386
|
330 340
....*....|....*....|...
gi 1125813690 339 LSLMGFPFIGGFYSKDLIVEFFF 361
Cdd:PRK08667 387 VSIAALPPFNGFASELLLYESFF 409
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
43-362 |
1.47e-24 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 108.05 E-value: 1.47e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 43 DLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKN--SFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSY 120
Cdd:PRK06521 71 FLPFHLRLDALSAFFLLVISLLGAAASLYSLGYFREYEGKGpgAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 121 CLVIYYQSINSYNS-GMMTIISNRIGDVMIILSM-IFFVSFGSFDFLSFNKVELICGILILVAGLT------KSAQIPFS 192
Cdd:PRK06521 151 FLVIANHREAEIRRaGFLYLLMAHAGALAILLAFgLLARESGSYDFAAMRAAHLSPFWASLVFLLAlfgfgaKAGLVPLH 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 193 AWLPAAM-AAPTPVSSLVhSSTLVTAGVYILMRFSYLF---EVKIFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTL 268
Cdd:PRK06521 231 VWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLlgaPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 269 SQLSMMMIILSLGKM----------ELSF----FHLLMHAMFKSMLFLCAGFVIHSFyGVQDIRMLGNFFKFSPVISSCM 334
Cdd:PRK06521 310 ENIGIIFVGLGLAMVfiaygmpllaALALtaalYHLLNHALFKSLLFLGAGAVLHAT-GTRDMEKLGGLIRRMPWTAWAF 388
|
330 340
....*....|....*....|....*...
gi 1125813690 335 MISFLSLMGFPFIGGFYSKDLIVEFFFF 362
Cdd:PRK06521 389 LIGCLAISALPPLNGFVSEWLLLQSLLS 416
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
104-358 |
1.90e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 103.49 E-value: 1.90e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 104 NMFTIILGWDGLGLVSYCLVIYYQSINSYNSGM-MTIISNRIGDVMIILSMIFFVSFGSFDFLSFNKVELICGILILVAG 182
Cdd:PRK07234 115 DLISLYVALEVLSIATFLLVAYPRTDRAIWVGLrYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAFALIALGL 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 183 LTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFEVkiFSTILIKVSVITMLMAGLNAFFEMDFKKV 262
Cdd:PRK07234 195 LVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPG--LDLIVRIFGVGTALLGVLFALLEKDLKRM 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 263 IAFSTLSQLSmmmIILSLGKMelSFFHLLMHAMFKSMLFLCAGfVIHSFYGVQDIRMLGNFFKFSPVIsscmmISFLSLM 342
Cdd:PRK07234 273 LAFSTISQLG---FILAAPLV--GGLYALAHGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIPLT-----MASFSIA 341
|
250
....*....|....*.
gi 1125813690 343 GFPFIGGFYSKDLIVE 358
Cdd:PRK07234 342 GFPLLAGFVSKVLTLK 357
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-442 |
3.35e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 90.65 E-value: 3.35e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 55 SMFSMVVLIISSMVVMYSNSYM---NTDKNKNSFCMIVLLFVFSMiLLIMMPNMFTIILGWDGLGLVSYCLVIYYQSINS 131
Cdd:PRK06589 86 LIFLLLIGFLWICALLYTPKYLainNIDSSSRFLFFFNLTILIGV-LIALSSDLFTMFVCYELLTISTAFLIGHTRNNIS 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 132 YNSGM--MTIISNRIGDVMIILSMIFFVSFGSFDFLS---FNKVELICGILILVAGLTKSAQIPFSAWLPAAMAAPTPVS 206
Cdd:PRK06589 165 LSGGYkyLKILMISALLLFLPAVILIYTKTGNLDFVSgglFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVS 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 207 SLVHSSTLVTAGVYILMR-------FSYLFEVKIFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMI--- 276
Cdd:PRK06589 245 ALLHAVIVVKTGLFCIYKillyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLsaf 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 277 ILSLGKMELSFFHLLMHAMFKSMLFLCAGfVIHSFYGVQDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFYSKDLI 356
Cdd:PRK06589 325 ILTPKALGAAILHLVSHSFAKICLFYSMG-SIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLI 403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 357 VEFFFFKVNNILLIILFILGVMFTLLYCMrliYELLLKGILSMSIYSSSFSYYMVFPILMLCFLVLISGNLLFWFSNPNL 436
Cdd:PRK06589 404 LLAASEQNQPWLSIIVMLVVIASSILSAL---YLLKILSSIYKPSLSENSFITKSLPYLMQISVITCCCALTLFYFIQIL 480
|
....*.
gi 1125813690 437 SLIFIS 442
Cdd:PRK06589 481 IREFLA 486
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
25-358 |
6.96e-19 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 90.06 E-value: 6.96e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 25 YLNNITVIEYIMISINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYmnTDKNKNSFCMIVLLFVFSMILLIMMPN 104
Cdd:PRK08668 42 LYFTLKVGTGEKLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSE--KTKNDAYFNMFALMSLAGVLGVFLAND 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 105 MFTIILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRIGDVMIILSMIFFVSFGSFDF---------LSFNKVELICG 175
Cdd:PRK08668 120 LLTLYIFWEIMTFSSFMMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFadisqglinDTSTGFALIVF 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 176 ILILVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLF-EVKIFST------------ILIKVS 242
Cdd:PRK08668 200 LFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLpGTKLFSEfgtyrgvplfnyILAWLG 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 243 VITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMIILSLGK---MELSFFHLLMHAMFKSMLFLCAGFVIHSfYGVQDIRM 319
Cdd:PRK08668 280 NISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTslgFAGGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKISE 358
|
330 340 350
....*....|....*....|....*....|....*....
gi 1125813690 320 LGNFFKFSPVISSCMMISFLSLMGFPFIGGFYSKDLIVE 358
Cdd:PRK08668 359 MGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFE 397
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
61-305 |
1.00e-17 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 86.29 E-value: 1.00e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 61 VLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLVIYYQsinsyNSGMMTI- 139
Cdd:PRK08168 78 VQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYP-----DRPFARLa 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 140 -----ISNRIGDVMIILSMIFF---VSFGSFDFLSFN-------KVELICGILILVAGLTKSAQIPFSAWLPAAMAAPTP 204
Cdd:PRK08168 153 ahkkfIADRLAELLLLAAAALAyleVGSLSLSALWAHlaaqgasPSLQAAALLLVLAVILKTAQLPVHGWLIQVMEAPTP 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 205 VSSLVHSStLVTAGVYILMRFSYLFEVKIFS-TILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMIILSLGKM 283
Cdd:PRK08168 233 VSALLHAG-VVNLGGFVLIRFAPLLEQAPPArWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLY 311
|
250 260
....*....|....*....|..
gi 1125813690 284 ELSFFHLLMHAMFKSMLFLCAG 305
Cdd:PRK08168 312 ELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
54-357 |
2.36e-17 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 84.82 E-value: 2.36e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 54 SSMFSMVVLIISSMVVMYSNSYMNTDKnKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLVIYYQSINSYN 133
Cdd:PRK08377 80 AALFVLIIAIVSFIMSIFSLKAVEVEP-IDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAE 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 134 SGMMTIISNRIGDVMIILSM-IFFVSFGSFDFL-------SFNKVELICGILILVAGLTKSAQI-PFSAWLPAA-MAAPT 203
Cdd:PRK08377 159 ASMKYIVLGGIGSSFFLIGVaLIYGATGTLNMAhiaqlagTIDPTVAQVGLALLIFGLAVEAELfPLNAWAPDAyQAAPH 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 204 PVSSLVhSSTLVTAGVYILMRFSY-LFEVKIFSTIL---IKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMIILS 279
Cdd:PRK08377 239 PITVMF-SAFVVKAGLYAMARILYlMQNANGWSSVLklvIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALA 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 280 LGK---MELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGnFFKFSPVISSCMMISFLSLMGFPFIGGFYSKDLI 356
Cdd:PRK08377 318 LGTqagVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEG-LGKRMPLTALALTIGALSTVGIPLFNVFWSKFRI 396
|
.
gi 1125813690 357 V 357
Cdd:PRK08377 397 I 397
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
175-311 |
6.89e-17 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 83.55 E-value: 6.89e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 175 GILILVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSStLVTAGVYILMRFSYLFEVKIFSTILIKVSVITMLMAGLNAF 254
Cdd:PRK08601 207 NLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLIGTGISL 285
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1125813690 255 FEMDFKKVIAFSTLSQLSMMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSF 311
Cdd:PRK08601 286 VQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRF 342
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
143-352 |
1.60e-16 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 82.65 E-value: 1.60e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 143 RIGDVMIILSMIFFVSF-GSFDF-----------LSFNKVELICgiLILVAGLT-KSAQIPFSAWLPAAMAAPTPvSSLV 209
Cdd:PRK07390 181 RVGDLLLLMGVVALSPLaGTLNFsdlaawaatanLDPLTATLLG--LALIAGPTgKCAQFPLHLWLDEAMEGPNP-ASIL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 210 HSSTLVTAGVYILMRFSYLFEVK-IFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMIILSLGKMELSFF 288
Cdd:PRK07390 258 RNSVVVATGAWVLIKLQPVLALSpVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALL 337
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1125813690 289 HLLMHAMFKSMLFLCAGFVIHSFYGvQDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFYS 352
Cdd:PRK07390 338 LLLTHAIAKALLFMSVGSIILTTIT-QDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
48-353 |
3.16e-16 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 81.32 E-value: 3.16e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 48 FLFDWVSSMFSMVVLIISSMVVMYSNSYM-NTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLV-IY 125
Cdd:COG1007 66 FVVDGFALFFKLLILLAALLVLLLSRDYLeRRGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaFR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 126 YQSINSYNSGMMTIISNRIGDVMII--LSMIFFVSfGSFDF---------LSFNKVELICGILILVAGLT-KSAQIPFSA 193
Cdd:COG1007 146 RDDRRSSEAALKYFLLGALSSGFLLygISLLYGAT-GSLNLagiaaalaaGGANSPLLLLGLVLVLAGLAfKLSAVPFHM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 194 WLP-AAMAAPTPVSSLVhsSTLV-TAGVYILMRFSYLF---EVKIFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTL 268
Cdd:COG1007 225 WTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLLVEAfpgLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 269 SQLSMMMIILSLGK---MELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGNFFKFSPVISSCMMISFLSLMGFP 345
Cdd:COG1007 303 AHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIP 382
|
....*...
gi 1125813690 346 FIGGFYSK 353
Cdd:COG1007 383 PTAGFFGK 390
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-358 |
2.04e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 78.99 E-value: 2.04e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 48 FLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLVIYYQ 127
Cdd:PRK08376 86 WEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRN 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 128 SI-NSYNSGMMTIISNRIGDVMIILSM-IFFVSFGSFDF------LSFN--KVELICGILILVAGLTKSAQIPFSAWLPA 197
Cdd:PRK08376 166 DTwEAIEAGIKYMFVGSLASSMVLLGIaLLYGQYGTLNMaylavkMSENptVVAKIALALFIAGLAMKSGAVPVHMWLPD 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 198 AM-AAPTPVSSLVHSSTLvtAGVYILMRFSY-LFEVKIFST----ILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQL 271
Cdd:PRK08376 246 AYpAAPSSISAMLLVIKQ--AGLYALARVLFsIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQI 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 272 SMMMIILSLG---------------KMELSFFHLLMHAMFKSMLFLCAGFVIHSFyGVQDIRMLGNFFKFSPVISSCMMI 336
Cdd:PRK08376 324 GYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLI 402
|
330 340
....*....|....*....|..
gi 1125813690 337 SFLSLMGFPFIGGFYSKDLIVE 358
Cdd:PRK08376 403 GAAAIVGLPPFNGFASKWLIYE 424
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
48-357 |
1.26e-14 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 76.47 E-value: 1.26e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 48 FLFDWVSSMFSMVVLIISSMVVMYSnsYMNTDKNKNsfcMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLVIYYQ 127
Cdd:PRK12668 63 GRVDKLSRVFGLIFGIMAFIGVIYA--LHVKDPGQH---VAALLYVGSALGAVFAGDLLTLFVFWELMAFTSTFLVWARG 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 128 SINSYNSGMMTIISNRIGDVMIILSMIFFVS-FGSFDFLSFNKVELICGILILVAGLTKSAQIPFSAWLPAAMAAPTPVS 206
Cdd:PRK12668 138 TKAAVRAGFRYLLVHVLGGVLLLAGILLHYAeTGSFAFGAIAGLGGTAAWLILIGFGVNAAFPPLHAWLPDAYPEATVTG 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 207 SLVHSSTLVTAGVYILMRFSYLFEvkifstILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMIILSLGKmEL- 285
Cdd:PRK12668 218 SVFLSAFTTKTAVYALARAFPGTE------LLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGT-ALa 290
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1125813690 286 ---SFFHLLMHAMFKSMLFLCAGFVIHSfYGVQDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFYSKDLIV 357
Cdd:PRK12668 291 ingAVAHAFNHILYKGLLFMSAGAVLYR-TGTEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
143-361 |
1.35e-13 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 73.32 E-value: 1.35e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 143 RIGDVMIILSM-IFFVSFGSFDFLSFN--KVELICGILILVAGLTK----SAQIPFSAWLPAAMA-APTPVSSLVhSSTL 214
Cdd:PRK08042 144 RLGTLLLAIACwLLWQRYGTLDLRLLDmrMQQLPLGSDIWLLGVIGfgllAGIIPLHGWVPQAHAnASAPAAALF-STVV 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 215 VTAGVYILMRFSYLFEVK--IFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMIILSLGKMELS------ 286
Cdd:PRK08042 223 MKIGLLGILTLSLLGGNAplWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIAleqpal 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 287 --------FFHLLMHAMFKSMLFLCAGFVIHSfYGVQDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFYSKDLIVE 358
Cdd:PRK08042 303 ialglvggLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
...
gi 1125813690 359 FFF 361
Cdd:PRK08042 382 SFF 384
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
172-353 |
1.08e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 70.17 E-value: 1.08e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 172 LICGILILVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYLFE----VKIFSTILIKVSVITML 247
Cdd:PRK08676 206 GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRqsgaAEQFSNVLIGLGIFSIA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 248 MAGLNAFFEMDFKKVIAFSTLSQLSMMMIILSLGKMELSF---FHLLMHAMFKSMLFLCAGfVIHSFYGVQDIRMLGNFF 324
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVF 364
|
170 180
....*....|....*....|....*....
gi 1125813690 325 KFSPVISSCMMISFLSLMGFPFIGGFYSK 353
Cdd:PRK08676 365 RLQPVAAWGVILGSAAIIGMPPFPLFLSK 393
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
176-357 |
5.80e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 68.03 E-value: 5.80e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 176 ILILVAGLTKSAQIPFSAWLPAAMA-APTPVSSLVhSSTLVTAGVYILMRFSYLFEVKIFS----TILIKVSVITMLMAG 250
Cdd:PRK06458 218 VFLLIGFGTKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSdfpgRLLLIFGLLSVLVAA 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 251 LNAFFEMDFKKVIAFSTLSQLSMMMIILSLGKMELSF---FHLLMHAMFKSMLFLCAGFVIHsFYGVQDIRMLGNFFKFS 327
Cdd:PRK06458 297 FFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFaalLHMLNHSLTKSAIFFASGNVLQ-KYGTRDINVIRGLLKVS 375
|
170 180 190
....*....|....*....|....*....|
gi 1125813690 328 PVISSCMMISFLSLMGFPFIGGFYSKDLIV 357
Cdd:PRK06458 376 PLTGWGLMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
48-353 |
3.86e-11 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 65.23 E-value: 3.86e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 48 FLFDWVSSMFSMVVLIISSMVVMYSNSYMnTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLVIY-Y 126
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYL-EDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALrR 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 127 QSINSYNSGMMTIISNRIGDVMIILSMIFFVSF-GSFDFL---------SFNKVELICGILILVAGLT-KSAQIPFSAWL 195
Cdd:PRK05777 148 DRRRSLEAAIKYFVLGALASGFLLYGMSLLYGAtGSLSFAgiakaladgSGNSLLLLFGLVFLLVGLAfKLSAVPFHMWT 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 196 PAAM-AAPTPVSSLVHSSTLVtAGVYILMRFSYLF---EVKIFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQL 271
Cdd:PRK05777 228 PDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAfggLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 272 SMMMIILSLGK---MELSFFHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIG 348
Cdd:PRK05777 307 GYLLVGLAAGTaegYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTA 386
|
....*
gi 1125813690 349 GFYSK 353
Cdd:PRK05777 387 GFWGK 391
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
137-357 |
6.55e-11 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 64.59 E-value: 6.55e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 137 MTIISNRIGDV-----MIILSMIFFVSFGSfdflsfnkvelicgililvagltKSAQIPFSaWLPAAMAAPTPVSSLVHS 211
Cdd:PRK12663 190 MAHIAMRLNDMgdtatLTTIALLFLLAFGM-----------------------KAALFPFM-WLPAAYHTPNTEVAALFA 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 212 STLVTAGVYILMR-FSYLF--EVKIFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMIILSLGK---MEL 285
Cdd:PRK12663 246 ALLTKVGIYALIRvFTLLFpqERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTpagING 325
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1125813690 286 SFFHLLMHAMFKSMLFLCAGFVIHsFYGVQDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFYSKDLIV 357
Cdd:PRK12663 326 AIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
175-353 |
9.04e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 64.22 E-value: 9.04e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 175 GILILVAGLTKSAQIPFSAWLPAAM-AAPTPVSSlVHSSTLVTAGVYILMRF-SYLFEVKIFSTILIKVSVITMLMAGLN 252
Cdd:PRK12665 212 FAVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRThTLLFPGGGLDTLLMVVALLTMVVGILG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 253 AFFEMDFKKVIAFSTLSQLSMMMIILSLGK---MELSFFHLLMHAMFKSMLFLCAGfVIHSFYGVQDIRMLGNFFKFSPV 329
Cdd:PRK12665 291 AIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPL 369
|
170 180
....*....|....*....|....
gi 1125813690 330 ISSCMMISFLSLMGFPFIGGFYSK 353
Cdd:PRK12665 370 LAVLFFVPALNLGGIPPFSGFIGK 393
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
148-388 |
9.50e-11 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 64.07 E-value: 9.50e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 148 MIILSMIFFVSFGSFDFLSFNKVELICGILI------LVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYI 221
Cdd:PRK05846 181 IIYLVVVYYNATGTFDIADLLNLPLPPGVQYwlflafFIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYG 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 222 LMRFSY-LF--EVKIFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMI-ILSLGKMELS--FFHLLMHAM 295
Cdd:PRK05846 261 LLRFSLpLFpdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLgIFAGNQLGIQgaIFQMISHGL 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 296 FKSMLFLCAGFVIHSFyGVQDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFYSKDLIVeFFFFKVnNILLIILFIL 375
Cdd:PRK05846 341 SSAALFLLVGVLYDRL-HTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL-LGSFQV-NPVIAFIATT 417
|
250
....*....|...
gi 1125813690 376 GVMFTLLYCMRLI 388
Cdd:PRK05846 418 GLILAAVYSLWLY 430
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
173-358 |
6.65e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 61.50 E-value: 6.65e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 173 ICGILILVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMR-FSYLF--EVKIFSTILIKVSVITMLMA 249
Cdd:PRK07691 210 VVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARtFTLFFshDTSFTHYLILILALLTIIFG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 250 GLNAFFEMDFKKVIAFSTLSQLSMMMIILSLGK---MELSFFHLLMHAMFKSMLFLCAGFVIHsFYGVQDIRMLGNFFKF 326
Cdd:PRK07691 290 VIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTesgMIGAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKR 368
|
170 180 190
....*....|....*....|....*....|..
gi 1125813690 327 SPVISSCMMISFLSLMGFPFIGGFYSKDLIVE 358
Cdd:PRK07691 369 YPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
48-358 |
1.22e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 57.35 E-value: 1.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 48 FLFDWVSSMFSMVVLIISSMVVMysnSYMNTDKNKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLVIYYQ 127
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 128 SINSYNSGMMTIISNRIGDVMIILSMIFFVSFGSFDFLS----------FNKVELICGILILVAGLTKSAQIPFSAWLPA 197
Cdd:PRK06277 145 TEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITdihnallvnpTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSD 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 198 AMAAPTPVSSLVHSS----TLVTAGVYILMRFSYLFEVKIFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSM 273
Cdd:PRK06277 225 IYAKAKPFGSALLQTfskfVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGY 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 274 MMIILSLGK---MELSFFHLLMHAMFKSMLFLCAGFVIHSfYGVQDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIGGF 350
Cdd:PRK06277 305 VAAGLALGTplgIVAGIFHAINHVIYKSALFLGAGIVSYR-TKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGF 383
|
....*...
gi 1125813690 351 YSKDLIVE 358
Cdd:PRK06277 384 QSKLMLAQ 391
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
165-353 |
1.46e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 50.89 E-value: 1.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 165 LSFNKVELICGILILVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSY-------LFEVKIFSTI 237
Cdd:PRK12662 202 LPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYdvfkanfVFTTLPFNNV 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 238 LIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMIILSLGK---MELSFFHLLMHAMFKSMLFLCAGFVIHSFyGV 314
Cdd:PRK12662 282 FMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTyygLAAAVAYIVNHSIVKSALFMVSGSISYHF-GT 360
|
170 180 190
....*....|....*....|....*....|....*....
gi 1125813690 315 QDIRMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFYSK 353
Cdd:PRK12662 361 TKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAK 399
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
151-363 |
2.83e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 50.08 E-value: 2.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 151 LSMIFFVSFGSFDFLSFN------KVELICGILILVAGLTKSAQIPFSAWLP-AAMAAPTPVSSLVhSSTLVTAGVYILM 223
Cdd:PRK06473 178 LGLVWLSGASSFDYEPLRshtlplSTQLLLLAPILVGFGIKIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 224 RFSYLFEVKIFSTI---LIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQlsMMMIIL-SLGKMELSF----FHLLMHAM 295
Cdd:PRK06473 257 RFGVGLFPEAWVYLapwLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGH--MGYILLaAAAATPLSIlaavFQMISHGL 334
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1125813690 296 FKSMLFLCAGfVIHSFYGVQDI---RMLGNFFKFSPVISSCMMISFLSLMGFPFIGGFyskdlIVEFFFFK 363
Cdd:PRK06473 335 ISALLFLLVG-VVYKKTGSRDVdvlRGLLNPERGLPITGSLMILGVMASAGIPGMVGF-----IAEFLVFR 399
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
37-85 |
3.73e-05 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 41.26 E-value: 3.73e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 1125813690 37 ISINSLDLKFYFLFDWVSSMFSMVVLIISSMVVMYSNSYMNTDKNKNSF 85
Cdd:pfam00662 2 LSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
185-362 |
4.46e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 46.21 E-value: 4.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 185 KSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSY-LFEV--KIFSTILIKVSVITMLMAGLNAFFEMDFKK 261
Cdd:MTH00204 222 KIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWpLFPAasEYFAPLIVMLSVIAVIYGSLTTCRQVDFKR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 262 VIAFSTLSQLSMMMIILSLGKME---LSFFHLLMHAMFKSMLFLCAGFVIHSFYgVQDIRMLGNFFKFSPVISSCMMISF 338
Cdd:MTH00204 302 LIAYSSVAHMGLVPLGLFTHTIEglvAAVFLMLAHGFVSSALFIAVTFLYERHH-TRLIKYYRGLTLTMPLFVIIMLVLS 380
|
170 180
....*....|....*....|....*...
gi 1125813690 339 LSLMGFP----FIGGFYSKDLIVEFFFF 362
Cdd:MTH00204 381 LANMGFPlscnFVGEFFSLLAAFEYSLG 408
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
32-362 |
5.18e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 45.94 E-value: 5.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 32 IEYIMISINSLDLKFY--FLFDWVSSMFSMVVLIISSMVVMYSNSYmntDKNKNSFCMIVLLFVFSMILLIMMPNMFTII 109
Cdd:PRK06459 22 ASYILTMISSIILLITsiYEYNGVLSFFSIISTIVWILASLYSIEY---DHYGKWLSSLYILTILGMAIVLTSDNYLLFL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 110 LGWDGLGLVSYclVIYYQSINSYNSGMMTIISNRIGDVMIILSmiFFVSFGSFDFLSFNKVELICGILILVAG-LTKSAQ 188
Cdd:PRK06459 99 AGWEIMTIPSY--VAIALTKKNKRPAFVFMAFGELSTVLILAG--FAWAFIISGTTNFSYLPSPVPLILASFGfIIKMGM 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 189 IPF--SAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFSYL---FEVKIFSTILIKVSVITMLMAGLNAFFEMDFKKVI 263
Cdd:PRK06459 175 MPFlvSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILtqtIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLL 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 264 AFST-------LSQLSMMMI----ILSLGKMELS--FFHLLMHAMFKSMLFLCAGFVIHSFYGvqdirMLGNFFKFSPVI 330
Cdd:PRK06459 255 AFSTienngaiLVALGLYMVtkqlITSIEHFSLItvILYSFAHSVAKTGLFLSSGLQEKQSIT-----YSKKIRNRWIEL 329
|
330 340 350
....*....|....*....|....*....|..
gi 1125813690 331 SSCMMISFLSLMgFPFIGGFYSKDLIVEFFFF 362
Cdd:PRK06459 330 GLTLLASSLSGL-LPNIGGVASWLLLESLFMF 360
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
151-305 |
1.07e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 41.62 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 151 LSMIFFVSFGSFDFLSFN------KVELICGILILVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMR 224
Cdd:PRK02546 186 LAMAFYGDTPTFDMTALAakdfglGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLR 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 225 FSYLF---EVKIFSTILIKVSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMI-ILSLGKMELSFFHLLM--HAMFKS 298
Cdd:PRK02546 266 MNAGMlpdAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIgIGSFTDLGTSGAMLQMisHGLIGA 345
|
....*..
gi 1125813690 299 MLFLCAG 305
Cdd:PRK02546 346 SLFFLVG 352
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
81-433 |
2.65e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 40.19 E-value: 2.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 81 NKNSFCMIVLLFVFSMILLIMMPNMFTIILGWDGLGLVSYCLVIYYQSINSYNSGMMTIISNRIGDVMIILSMIFFVSFG 160
Cdd:MTH00160 3 MNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLNL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 161 SFDFLSFNkvelicgILILVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILMRFsylfevkIFSTILIK 240
Cdd:MTH00160 83 MLFNNISS-------MLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL-------INNNFIII 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 241 VSVITMLMAGLNAFFEMDFKKVIAFSTLSQLSMMMIILSLGKMELSFFHLLMHAMFKSMLFLCAGFVIHSfygvqdIRML 320
Cdd:MTH00160 149 IIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFF------LNQL 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 321 GNFFKFSPVISSCMMISFLSLMGFPFIGGFYSKdLIVEFFFFKVNNILLIILFILGVMFTLLYCMRLIYELLLKGILSMS 400
Cdd:MTH00160 223 FNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPK-WIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNK 301
|
330 340 350
....*....|....*....|....*....|...
gi 1125813690 401 IYSSSFSYYMVFPILMLCFLVLISGNLLFWFSN 433
Cdd:MTH00160 302 WNLKKKKNKFSLILNFLSFISLFGLILSSLLFL 334
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
176-358 |
3.48e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 39.81 E-value: 3.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 176 ILILVAGLTKSAQIPFSAWLPAAMAAPTPVSSLVHSSTLVTAGVYILmrfsYLFEVKIFSTILIKVSVITMLMAGLNAFF 255
Cdd:MTH00112 96 TLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLL----LMTSNSLNPTLLLTLAILSTLIGGWGGLN 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 256 EMDFKKVIAFSTLSQLSMMMIILSLGKmelsffHLLMHAMFKSMLFLCAGFVIHSFYGVQDIRMLGNFFKFSPVISSCMM 335
Cdd:MTH00112 172 QTQLRKIMAFSSIAHLGWMIAIITYSP------KLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTLM 245
|
170 180
....*....|....*....|...
gi 1125813690 336 ISFLSLMGFPFIGGFYSKDLIVE 358
Cdd:MTH00112 246 LTLLSLAGLPPLTGFMPKWLILQ 268
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
176-284 |
7.82e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 39.07 E-value: 7.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1125813690 176 ILILVAGLTKSAQIPFSAWLPAAM-AAPTPVSSLVhsSTLVTAGVYILmrfsyLFEVKIFSTILIKVSVITMLMAGLNAF 254
Cdd:MTH00198 303 LFITVAILFKLAAAPFHMWTPDVYeGAPTPTTALI--AIIPKFTVYIL-----LTSLVITSKLLLSVAIISLVVGAFGAL 375
|
90 100 110
....*....|....*....|....*....|
gi 1125813690 255 FEMDFKKVIAFSTLSQLSMMMIILSLGKME 284
Cdd:MTH00198 376 NQTRIKRLLAYSGIGHIGFILIGVSAGTYE 405
|
|
| |
