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Conserved domains on  [gi|1181491988|ref|YP_009353870|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Tropidomya abbreviata]

Protein Classification

Na(+)/H(+) antiporter subunit C; NADH-quinone oxidoreductase subunit NuoK( domain architecture ID 10009589)

Na(+)/H(+) antiporter subunit C (MrpC) is part of a heterooligomeric complex together with MrpA, MrpB, MrpD, MrpE, MrpF and MrpG, which is involved in resistance to Na(+) and excretion of Li(+) and Na(+)| NADH-quinone oxidoreductase subunit K (NuoK) is part of the membrane domain of complex I of the respiratory chain that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-93 1.01e-07

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 214434  Cd Length: 97  Bit Score: 45.22  E-value: 1.01e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491988  1 MVFFLSVLIIYVAFFSIWLQVKHFLCVLLLFEVITLGMFSMMFFVFSMNSDLF-LILLFVAIMVCDAACGLSLLVCSARK 79
Cdd:MTH00149   4 MLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSyLFLIILTFGACEASLGLSLLVSLIRL 83

                         90
                 ....*....|....
gi 1181491988 80 FGNDSIYGLILNKF 93
Cdd:MTH00149  84 HGNDYVSSLSSLKF 97
 
Name Accession Description Interval E-value
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-93 1.01e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 45.22  E-value: 1.01e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491988  1 MVFFLSVLIIYVAFFSIWLQVKHFLCVLLLFEVITLGMFSMMFFVFSMNSDLF-LILLFVAIMVCDAACGLSLLVCSARK 79
Cdd:MTH00149   4 MLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSyLFLIILTFGACEASLGLSLLVSLIRL 83

                         90
                 ....*....|....
gi 1181491988 80 FGNDSIYGLILNKF 93
Cdd:MTH00149  84 HGNDYVSSLSSLKF 97
 
Name Accession Description Interval E-value
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-93 1.01e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 45.22  E-value: 1.01e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491988  1 MVFFLSVLIIYVAFFSIWLQVKHFLCVLLLFEVITLGMFSMMFFVFSMNSDLF-LILLFVAIMVCDAACGLSLLVCSARK 79
Cdd:MTH00149   4 MLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSyLFLIILTFGACEASLGLSLLVSLIRL 83

                         90
                 ....*....|....
gi 1181491988 80 FGNDSIYGLILNKF 93
Cdd:MTH00149  84 HGNDYVSSLSSLKF 97
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 1-85 2.80e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 41.29  E-value: 2.80e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491988  1 MVFFLSVLIIYVAFFSIWLQVKHFLCVLLLFEVITLGMF-SMMFFVFSMNSDLFLILLFVAIMVCDAACGLSLLVCSARK 79
Cdd:MTH00162   2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFfLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                 ....*.
gi 1181491988 80 FGNDSI 85
Cdd:MTH00162  82 HGNDYF 87
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 3-92 2.02e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 39.57  E-value: 2.02e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491988  3 FFLSVLIIYVAFFSIWLQVKHFLCVLLLFEVITLGMFSMMFFVFS-MNSDLFLILLFVAIMVCDAACGLSLLVCSARKFG 81
Cdd:MTH00188   6 ILVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSyMEKELYLSLVLLTFAACEASVGLALLVSLIRSHG 85

                         90
                 ....*....|.
gi 1181491988 82 NDSIYGLILNK 92
Cdd:MTH00188  86 SDYVSSLNLIK 96
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 19-83 5.42e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 35.59  E-value: 5.42e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1181491988 19 LQVKHFLCVLLLFEVITLGMFsMMFFVFSMNSDL----FLILLFVAIMVCDAACGLSLLVCSARKFGND 83
Cdd:MTH00125  21 FHRTHLMSALLCLESMMLSLF-IMLSLWPITTQTpsftPMPIILLTFSACEAGTGLALLVATTRTHGSD 88
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 4-92 3.83e-03

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 33.57  E-value: 3.83e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491988  4 FLSVLIIYVAFFSIWLQVKHFLCVLLLFEVITLGM--FSMMFFVFSMNSDLFLILLFVAIMVCDAACGLSLLVCSARKFG 81
Cdd:MTH00013   6 FILSISPFISMFNLSLQRKHLLMSLLSLEAMILSLalFIPLSLMFANQVNGMLAIVLLTFGACEASLGLSLLVLMTRSYG 85

                         90
                 ....*....|.
gi 1181491988 82 NDSIYGLILNK 92
Cdd:MTH00013  86 NDMLKSLTSNK 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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