|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
60-455 |
4.34e-104 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 316.01 E-value: 4.34e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 60 DSLGSIMVLLSIWIVYLSVIASKDFLFSGGYVNIgvYILLMMTMLMSLVLVFFSSFILVFYIFFEFVLIPMSYMILGWGY 139
Cdd:MTH00150 23 DSMSSLLISLSLWISGLMMLASQKSVKLRNKSSS--FSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLILGWGY 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 140 QPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSF-LVGVSSSSWWFFEIGGLIFILVFLVKLPVFFFHLWLPKAHV 218
Cdd:MTH00150 101 QPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMlLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPKAHV 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 219 EAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEKVMVLGLWGALLTSVMCFRQSDVKSMIAYSSIGHMALVLGGC 298
Cdd:MTH00150 181 EAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGV 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 299 LSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKSGLASIPCLSMSMFLLLCVNMSSPPSMSWVSEIML 378
Cdd:MTH00150 261 LSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMI 340
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1181491979 379 ISSV-FYFSVMTFCVSMMIpFVVCVFCLYLFVSSQHGGVENNLGFGMKPTHLIFLVSVLHWLPAFLMVPMILFMGSMV 455
Cdd:MTH00150 341 FPSLiSYSPWFFVPLGLMV-FLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLLFMWI 417
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
60-445 |
5.72e-95 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 293.21 E-value: 5.72e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 60 DSLGSIMVLLSIWIVYLSVIASKDFLFSGGYVNIgvYILLMMTMLMSLVLVFFSSFILVFYIFFEFVLIPMSYMILGWGY 139
Cdd:MTH00163 55 DLLSFGLILLSFWICMLMILSSESVYKKNNYSNL--FLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGY 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 140 QPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSFLVGVSSSSWWFFEigGLIFILVFLVKLPVFFFHLWLPKAHVE 219
Cdd:MTH00163 133 QPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNFFGSLNFLW--YLSMILAFLVKMPMFFVHLWLPKAHVE 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 220 APVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEKVMVLGLWGALLTSVMCFRQSDVKSMIAYSSIGHMALVLGGCL 299
Cdd:MTH00163 211 APVSGSMILAGVLLKLGGYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLM 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 300 SSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKSGLASIPCLSMSMFLLLCVNMSSPPSMSWVSEIMLI 379
Cdd:MTH00163 291 TFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLI 370
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1181491979 380 SSVFYFSVMTFCVSMMIPFVVCVFCLYLFVSSQHGGVENNLGFGMKPTHLIFLVSVLHWLPAFLMV 445
Cdd:MTH00163 371 NSLISWSKLSMIFLMLLSFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLI 436
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
60-445 |
5.87e-90 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 280.86 E-value: 5.87e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 60 DSLGSIMVLLSIWIVYLSVIASKDFLFSGGYVNIgvYILLMMTMLMSLVLVFFSSFILVFYIFFEFVLIPMSYMILGWGY 139
Cdd:MTH00014 58 DMLSAPLITLTLWITALMILASFKIFQNNKAPKT--FMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGY 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 140 QPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSFLV-GVSSSSWWFFEIGGLIFILVFLVKLPVFFFHLWLPKAHV 218
Cdd:MTH00014 136 QPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMsSMEPPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHV 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 219 EAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEKVMVLGLWGALLTSVMCFRQSDVKSMIAYSSIGHMALVLGGC 298
Cdd:MTH00014 216 EAPVAGSMILAGILLKLGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGI 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 299 LSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKSGLASIPCLSMSMFLLLCVNMSSPPSMSWVSEIML 378
Cdd:MTH00014 296 MSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIML 375
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1181491979 379 ISSVFYFSVMTFCVSMMIPFVVCVFCLYLFVSSQHGGVENNLGFGMKPTHLIFLVSVLHWLPAFLMV 445
Cdd:MTH00014 376 LTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILI 442
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
60-445 |
3.43e-88 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 276.09 E-value: 3.43e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 60 DSLGSIMVLLSIWIVYLSVIASKDFLFSGGYVNIgvYILLMMTMLMSLVLVFFSSFILVFYIFFEFVLIPMSYMILGWGY 139
Cdd:MTH00205 56 DSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKL--FTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGY 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 140 QPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSFLVGVSSSSWWFFE-IGGLIFILVFLVKLPVFFFHLWLPKAHV 218
Cdd:MTH00205 134 QPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLfLYWIFLMLAFLVKLPMYFVHLWLPKAHV 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 219 EAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEKVMVLGLWGALLTSVMCFRQSDVKSMIAYSSIGHMALVLGGC 298
Cdd:MTH00205 214 EAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGV 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 299 LSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKSGLASIPCLSMSMFLLLCVNMSSPPSMSWVSEIML 378
Cdd:MTH00205 294 FSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILL 373
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1181491979 379 ISSVFYFSVMTFCVSMMIPFVVCVFCLYLFVSSQHGGVENNLGFGMKPTHLIFLVSVLHWLPAFLMV 445
Cdd:MTH00205 374 IMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILI 440
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
60-451 |
4.07e-79 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 252.55 E-value: 4.07e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 60 DSLGSIMVLLSIWIVYLSVIASKDFLFSGGYVNIGVYILLMMTMLMSLVLVFFSSFILVFYIFFEFVLIPMSYMILGWGY 139
Cdd:MTH00206 58 DPLSSPLVILSCWLLPLMFLASQNHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGN 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 140 QPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMS-FLVGVSSSSWWFFEIGGLIFILVFLVKLPVFFFHLWLPKAHV 218
Cdd:MTH00206 138 QKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSlYILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHV 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 219 EAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEKVMVLGLWGALLTSVMCFRQSDVKSMIAYSSIGHMALVLGGC 298
Cdd:MTH00206 218 EAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGI 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 299 LSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKSGLASIPCLSMSMFLLLCVNMSSPPSMSWVSEIML 378
Cdd:MTH00206 298 LSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLI 377
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1181491979 379 ISSVFYFSVMTFCVSMMIPFVVCVFCLYLFVSSQHGGVENNLGFGMKPTHLIFLVSVLHWLPAFLMVPMILFM 451
Cdd:MTH00206 378 ITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
60-414 |
7.39e-79 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 252.20 E-value: 7.39e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 60 DSLGSIMVLLSIWIVYLSVIASKDFLFSGGYVNIGVYILLMMTMLMSLVLVFFSSFILVFYIFFEFVLIPMSYMILGWGY 139
Cdd:MTH00044 60 DSLSSPLIILSCWLAPLSLLASINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 140 QPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSF----LVGVSSSSWWFFEIGGLIFILVFLVKLPVFFFHLWLPK 215
Cdd:MTH00044 140 QKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIplseLNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPK 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 216 AHVEAPVFGSMILAGVLLKLGGFGLIRLMG-FYLVDLGNLWEKVMVLGLWGALLTSVMCFRQSDVKSMIAYSSIGHMALV 294
Cdd:MTH00044 220 AHVEAPVAGSMILAAILLKLGGYGLIRLINlFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLV 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 295 LGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKsGLASIPCLSMSMFLLLCV-NMSSPPSMSWV 373
Cdd:MTH00044 300 AAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITR-GFKLITPLLPLWWLIFCAaNLGLPPLPNLI 378
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1181491979 374 SEIMLISSVFYFSVMTFCVSMMIPFVVCVFCLYLFVSSQHG 414
Cdd:MTH00044 379 GELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSG 419
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
60-451 |
1.06e-77 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 248.96 E-value: 1.06e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 60 DSLGSIMVLLSIWIVYLSVIASKDFLFSGGYVNIGVYILLMMTMLMSLVLVFFSSFILVFYIFFEFVLIPMSYMILGWGY 139
Cdd:MTH00124 59 DQISAPLLVLSCWLLPLMILASQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGN 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 140 QPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSF----LVGVSSSSWWFFEIGGLIFILVFLVKLPVFFFHLWLPK 215
Cdd:MTH00124 139 QPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLpmlqLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPK 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 216 AHVEAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEKVMVLGLWGALLTSVMCFRQSDVKSMIAYSSIGHMALVL 295
Cdd:MTH00124 219 AHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVI 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 296 GGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKsGLASIPCLSMSMFLLLCV-NMSSPPSMSWVS 374
Cdd:MTH00124 299 AATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTR-GLQLLLPLMTTWWLLANLtNMALPPTINLMG 377
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1181491979 375 EIMLISSVFYFSVMTFCVSMMIPFVVCVFCLYLFVSSQHGGVENNLGFgMKPTHliflvSVLHWLPAFLMVPMILFM 451
Cdd:MTH00124 378 ELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGTLPTHITT-IQPTH-----TREHLLMTLHIIPLLLLI 448
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
60-451 |
4.89e-77 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 247.52 E-value: 4.89e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 60 DSLGSIMVLLSIWIVYLSVIASKDFLFSGGYVNIGVYILLMMTMLMSLVLVFFSSFILVFYIFFEFVLIPMSYMILGWGY 139
Cdd:MTH00068 59 DQISSPLLILTCWLLPLMILASQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGN 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 140 QPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMS----------FLVGVSSSSWWFFeiggliFILVFLVKLPVFFF 209
Cdd:MTH00068 139 QEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSlillelmspmQLMTYTNKIWWLA------CLLAFMVKMPLYGL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 210 HLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEKVMVLGLWGALLTSVMCFRQSDVKSMIAYSSIG 289
Cdd:MTH00068 213 HLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVS 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 290 HMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKSGLASIPCLSMSMFLLLCVNMSSPPS 369
Cdd:MTH00068 293 HMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPS 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 370 MSWVSEIMLISSVFYFSVMTFCVSMMIPFVVCVFCLYLFVSSQHGGVENNLGFgMKPTHliflvSVLHWLPAFLMVPMIL 449
Cdd:MTH00068 373 PNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNHLKT-LFPTY-----TREHLLLALHILPMLL 446
|
..
gi 1181491979 450 FM 451
Cdd:MTH00068 447 LI 448
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
60-445 |
5.41e-69 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 226.76 E-value: 5.41e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 60 DSLGSIMVLLSIWIVYLSVIASKDFLFSGGYVNIGVYILLMMTMLMSLVLVFFSSFILVFYIFFEFVLIPMSYMILGWGY 139
Cdd:MTH00127 60 DPLSTPLLVLTCWLLPLMILASQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGN 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 140 QPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSFLVGVSSS----SWWFFEIGGLIFILVFLVKLPVFFFHLWLPK 215
Cdd:MTH00127 140 QTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQplqlSSWADKLWWAGCLLAFLVKMPLYGVHLWLPK 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 216 AHVEAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEKVMVLGLWGALLTSVMCFRQSDVKSMIAYSSIGHMALVL 295
Cdd:MTH00127 220 AHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 296 GGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKSGLASIPCLSMSMFLLLCVNMSSPPSMSWVSE 375
Cdd:MTH00127 300 GGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGE 379
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1181491979 376 IMLISSVFYFSVMTFCVSMMIPFVVCVFCLYLFVSSQHGGVENNLgFGMKPTHL-IFLVSVLHWLPAFLMV 445
Cdd:MTH00127 380 LMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHI-IALNPSHTrEHLLMALHLLPLLLLI 449
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
60-414 |
2.29e-65 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 217.07 E-value: 2.29e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 60 DSLGSIMVLLSIWIVYLSVIASKDFLFSGGYVNIGVYILLMMTMLMSLVLVFFSSFILVFYIFFEFVLIPMSYMILGWGY 139
Cdd:MTH00110 59 DSLSTPLLILTTWLLPLMLMASQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGN 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 140 QPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSFLV----GVSSSSWWFFEIGGLIFILVFLVKLPVFFFHLWLPK 215
Cdd:MTH00110 139 QTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLLlqlwAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPK 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 216 AHVEAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEKVMVLGLWGALLTSVMCFRQSDVKSMIAYSSIGHMALVL 295
Cdd:MTH00110 219 AHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVI 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 296 GGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVfMKSGLASIPCLSMSMFLLLCV-NMSSPPSMSWVS 374
Cdd:MTH00110 299 VAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMI-LARGLQTLLPLMATWWLLASLtNLALPPTINLIG 377
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1181491979 375 EIMLISSVFYFSVMTFCVSMMIPFVVCVFCLYLFVSSQHG 414
Cdd:MTH00110 378 ELFVIMSSFSWSNITIILMGLNMLITALYSLYMLITTQRG 417
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
60-383 |
6.74e-51 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 179.51 E-value: 6.74e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 60 DSLGSIMVLLSIWIVYLSVIASkdflFSGGYVNIGVYILLMMTMLMSLVLVFFSSFILVFYIFFEFVLIPMSYMILGWGY 139
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 140 qPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSF----LVGVSSSSWWFFEIGGLIFIlVFLVKLPVFFFHLWLPK 215
Cdd:COG1008 157 -ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFdiaeLAAAPLPLTAQLLLFLAFFI-AFAVKVPMFPFHTWLPD 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 216 AHVEAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEK-VMVLGLWGALLTSVMCFRQSDVKSMIAYSSIGHMALV 294
Cdd:COG1008 235 AHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPlLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 295 LGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMkSGLAS-IPCLSMSMFLLLCVNMSSPPSMSWV 373
Cdd:COG1008 315 LLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADL-GGLAKrMPVLAALFLLAALASLGLPGTSGFV 393
|
330
....*....|
gi 1181491979 374 SEIMLISSVF 383
Cdd:COG1008 394 GEFLVLLGAF 403
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
60-383 |
2.24e-44 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 161.65 E-value: 2.24e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 60 DSLGSIMVLLSIWIVYLSVIASKDFLFSggyvNIGVYILLMMTMLMSLVLVFFSSFILVFYIFFEFVLIPMSYMILGWGy 139
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWG- 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 140 QPERLQAVMYMLLYTIGASLPLMVTLIY-SFLSEGTMSFL------VGVSSSSWWFFeigglIFILVFLVKLPVFFFHLW 212
Cdd:TIGR01972 151 GPNRIYAAMKFFLYTLAGSLLMLLAILGlYFLGGGTFDLLellnlpLPFGVQTWLFL-----AFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 213 LPKAHVEAPVFGSMILAGVLLKLGGFGLIRlmgFYLVDLGNLWEK----VMVLGLWGALLTSVMCFRQSDVKSMIAYSSI 288
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLR---FNLPLFPDASLYfapvLAALGVIAIIYGALIALAQTDIKRLIAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 289 GHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKSGLASIPCLSMSMFLLLCVNMSSPP 368
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPG 382
|
330
....*....|....*
gi 1181491979 369 SMSWVSEIMLISSVF 383
Cdd:TIGR01972 383 TSGFVGEFLILLGSF 397
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
110-422 |
3.94e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 161.00 E-value: 3.94e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 110 VFFSSFILVFYIFFEFVLIPMSYMILGWGYQPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSFLVGVSSSswWFF 189
Cdd:MTH00204 128 VFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIK--LPL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 190 EIGGLIFILVFL---VKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEKVMV-LGLWG 265
Cdd:MTH00204 206 SIQKWLLVGFFLslaVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVmLSVIA 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 266 ALLTSVMCFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKSG 345
Cdd:MTH00204 286 VIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGL 365
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1181491979 346 LASIPCLSMSMFLLLCVNMSSPPSMSWVSEIMLISSVFYFSVMTFCVSMMIPFVVCVFCLYLFVSSQHGGVENNLGF 422
Cdd:MTH00204 366 TLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLF 442
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
117-383 |
7.47e-44 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 155.55 E-value: 7.47e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 117 LVFYIFFEFVLIPMSYMILGWGYQPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSF----LVGVSSSSWWFFEIG 192
Cdd:pfam00361 5 LLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFdelsKALTGGLNSSGLLLL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 193 GLIFILVFLVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEKVMVLGLWGALLTSVM 272
Cdd:pfam00361 85 FLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLGSLA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 273 CFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMV-NYNYEILGSRGMVFMKSGLASIPC 351
Cdd:pfam00361 165 ALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKTMPI 244
|
250 260 270
....*....|....*....|....*....|..
gi 1181491979 352 LSMSMFLLLCVNMSSPPSMSWVSEIMLISSVF 383
Cdd:pfam00361 245 LALVFLVAMLSLAGLPPTAGFLGKFLILAAAV 276
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
60-386 |
1.69e-43 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 159.60 E-value: 1.69e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 60 DSLGSIMVLLSIWIVYLSVIASkdflFSGGYVNIGVYILLMMTMLMSLVLVFFSSFILVFYIFFEFVLIPMSYMILGWGY 139
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLAS----WEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 140 qPERLQAVMYMLLYTIGASLPLMVTLIY----SFLSEGTMSF--LVGVSSSS---WWFFeiggLIFILVFLVKLPVFFFH 210
Cdd:PRK05846 157 -KNRIYAATKFFLYTLLGSLLMLVAIIYlvvvYYNATGTFDIadLLNLPLPPgvqYWLF----LAFFIAFAVKMPMFPLH 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 211 LWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEK-VMVLGLWGALLTSVMCFRQSDVKSMIAYSSIG 289
Cdd:PRK05846 232 TWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPiIITLGVIAIIYGALVALAQTDIKKLIAYSSIS 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 290 HMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMkSGLAS-IPCLSMSMFLLLCVNMSSPP 368
Cdd:PRK05846 312 HMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADY-GGLAKvMPVLAAFFLFFAMASLGLPG 390
|
330
....*....|....*...
gi 1181491979 369 SMSWVSEIMLISSVFYFS 386
Cdd:PRK05846 391 TSGFVGEFLILLGSFQVN 408
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
111-419 |
2.20e-41 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 151.98 E-value: 2.20e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 111 FFSSFILVFYIFFEFVLIPMSYMILGWGYQPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSFLVGVSsssWWFFe 190
Cdd:MTH00094 79 FVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLS---WEMF- 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 191 iggLIFILVFLVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWekvMVLGLWGALLTS 270
Cdd:MTH00094 155 ---FILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFVYNNFW---IIFSLLGMILSS 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 271 VMCFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKSGLASIP 350
Cdd:MTH00094 229 FCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSM 308
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1181491979 351 CLSMSMFLLLCVNMSSPPSMSWVSEIMLISSVFYFSVMTFCVSMMIPFVVCVFCLYLFVSSQHGGVENN 419
Cdd:MTH00094 309 FFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSN 377
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
110-386 |
1.82e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 150.97 E-value: 1.82e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 110 VFFSSFILVFYIFFEFVLIPMSYMILGWGYQPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSFLVGVS---SSSW 186
Cdd:MTH00217 125 VFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCClkiEKEL 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 187 WFFEIGGliFILVFLVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEK-VMVLGLWG 265
Cdd:MTH00217 205 QYFIFLG--FFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPlIQTLSLLA 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 266 ALLTSVMCFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKSG 345
Cdd:MTH00217 283 IIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGM 362
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1181491979 346 LASIPCLSMSMFLLLCVNMSSPPSMSWVSEIMLISSVFYFS 386
Cdd:MTH00217 363 VITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYS 403
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
110-388 |
1.57e-39 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 148.92 E-value: 1.57e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 110 VFFSSFILVFYIFFEFVLIPMsYMILG-WGYQPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSFLVGVSSSSWWF 188
Cdd:MTH00226 147 VFSVLDIFMFYILFEGVLIPM-YLILGiWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVS 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 189 FEIGGLIFILVFL---VKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLmGFYLVDLG--NLWEKVMVLGL 263
Cdd:MTH00226 226 EQTQKWIFLGIFLamaVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRL-SWPILPLGaqNLAPAVIAMGI 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 264 WGALLTSVMCFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMK 343
Cdd:MTH00226 305 VGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYR 384
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1181491979 344 SGLASIPCLSMSMFLLLCVNMSSPPSMSWVSEIMLISSVFYFSVM 388
Cdd:MTH00226 385 GLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPI 429
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
110-377 |
1.49e-34 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 134.77 E-value: 1.49e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 110 VFFSSFILVFYIFFEFVLIPMSYMILGWGYQpERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSF---LVGVSSSSW 186
Cdd:PRK12561 103 VFLAQDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFdlaELGAKSYPL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 187 WFFEIGGLIFILVFLVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEKV-MVLG--- 262
Cdd:PRK12561 182 ALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPAlAILGvvn 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 263 -LWGALLTsvmcFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVF 341
Cdd:PRK12561 262 iIYGALNA----FAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPN 337
|
250 260 270
....*....|....*....|....*....|....*..
gi 1181491979 342 MkSGLASIPCLSMSMFLLLCVNMSSPPSMS-WVSEIM 377
Cdd:PRK12561 338 M-GGLAKVMPKTFALFTASSMASLALPGMSgFVSELT 373
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
111-452 |
1.30e-28 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 117.88 E-value: 1.30e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 111 FFSSFILVFYIFFEFVLIPMSYMILGWGYQpERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSFLVGVSSSSWWFFE 190
Cdd:PRK06473 124 FLAQDLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 191 IGGLIFILV---FLVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRL-MGFYLVDLGNLWEKVMVLGLWGA 266
Cdd:PRK06473 203 TQLLLLAPIlvgFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFgVGLFPEAWVYLAPWLATWAVVSV 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 267 LLTSVMCFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKSGL 346
Cdd:PRK06473 283 LYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLL 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 347 ASIPCLSMSMFLLLCVNMSS---PPSMSWVSEIMLISSVF-YFSVMTFcVSMMIPFVVCVFCLYLFvssqhggveNNLGF 422
Cdd:PRK06473 363 NPERGLPITGSLMILGVMASagiPGMVGFIAEFLVFRGSFpIFPVQTL-LCMIGTGLTAVYFLLLV---------NRVFF 432
|
330 340 350
....*....|....*....|....*....|...
gi 1181491979 423 GMKPTHLIFLVSVLhW---LPAFLMVPMILFMG 452
Cdd:PRK06473 433 GRLTAELSNLPRVL-WserLPALVLAVLIVVLG 464
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
110-332 |
4.20e-27 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 113.65 E-value: 4.20e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 110 VFFSSFILVFYIFFEFVLIPMSYMILGWGYQpERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSFLVGVSSSSWWFF 189
Cdd:PRK02546 131 VFAVQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 190 EIGGLI---FILVFLVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEKVM-VLGLWG 265
Cdd:PRK02546 210 GFQLLCyagLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLiVLGVVN 289
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1181491979 266 ALLTSVMCFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYE 332
Cdd:PRK02546 290 IIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYD 356
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
60-383 |
4.85e-27 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 112.55 E-value: 4.85e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 60 DSLGSIMVLLSIWIVYLSVIASKDFLfsGGYVNIGVYILLMMTMLMSLVLVFFSSFILVFYIFFEFVLIPmSYMILGWGY 139
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYM--RHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLA-SYGLVALGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 140 QPERLQA-VMYMLLYTIGASLpLMVTLIYSFLSEGTMSF---LVGVSSSSWWFFEIGGLIFILVFLVKLPVFFFHLWLPK 215
Cdd:COG0651 152 TKEALRAgLKYLILNLVGSAL-FLLGVGLLYGATGTLNMadlAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 216 AHVEAPVFGSMILAGVLLKLGGFGLIRLMG--FYLVDLGNLWEKVMVLGLWGALLTSVMCFRQSDVKSMIAYSSIGHMAL 293
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTllFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 294 VLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKsGLASIPCLSMSMFLLLCVNMSS-PPSMSW 372
Cdd:COG0651 311 ILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLG-GLGKRMPLTAAAFLIGALALAGlPPLSGF 389
|
330
....*....|.
gi 1181491979 373 VSEIMLISSVF 383
Cdd:COG0651 390 VSKWLLLQAAL 400
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
116-452 |
7.02e-23 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 100.94 E-value: 7.02e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 116 ILVFYIFFEFVLIPMSYMILGWGYQpERLQAVMYMLLYT-IGASLPLMVTLIYSFLSEGTMSFLVGVSSSSWWF-FEIGG 193
Cdd:PRK07363 129 LLLFFLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTaVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLnTQLIL 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 194 LIFILV-FLVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRlmgFYLVDLGNLWEKVM-VLGLWGA---LL 268
Cdd:PRK07363 208 LTGLLLgFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLR---FGLQLFPQTWSLVApGLAIIGTisvIY 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 269 TSVMCFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKSGLAS 348
Cdd:PRK07363 285 GALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNP 364
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 349 IPCLSMSMFLLLCVNMSS---PPSMSWVSEIMlissVFYFSVMTFcvsmMIPFVVCVFCLYL----FVSsqhggVENNLG 421
Cdd:PRK07363 365 IRGLPLTSALLVLAGMASagiPGLVGFVAEFI----VFQGSFSTF----PIPTLLCIVASGLtavyFVI-----LLNRTC 431
|
330 340 350
....*....|....*....|....*....|...
gi 1181491979 422 FGMKPTHLIFLVSVL--HWLPAFLMVPMILFMG 452
Cdd:PRK07363 432 FGRLDNKLAYYPKVLwsEKIPALILTALILFLG 464
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
110-324 |
4.20e-22 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 98.48 E-value: 4.20e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 110 VFFSSFILVFYIFFEFVLIPMSYMILGWGYQpERLQAVMYMLLYTIGASLP-LMVTLIYSFLS--EGTMSFLVGVSSSSW 186
Cdd:CHL00011 128 LFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFlLIGVLGMGLYGsnEPTLNFETLANQSYP 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 187 WFFEIGGLI-FILVFLVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEK-VMVLGLW 264
Cdd:CHL00011 207 VALEILFYIgFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPwLVIVGAI 286
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 265 GALLTSVMCFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLF 324
Cdd:CHL00011 287 QIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALF 346
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
60-411 |
1.15e-19 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 90.75 E-value: 1.15e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 60 DSLGSIMVLLSIWIVYLSVIaskdFLFSGGYVNIGVYILLMMTMLMSlvlVFFSSFILVFYIFFEFVLIPMSYMILGWGY 139
Cdd:MTH00062 44 DSLSFYLILLVLFLGLYSQV----MFYNLLSGVSRFFLFLSLIFSIL---CFCVNNSLLFWFFYELSIIPLLYLLFSESP 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 140 QPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSFLVGVSSSSWWFfeIGGLIFILVFLVKLPVFFFHLWLPKAHVE 219
Cdd:MTH00062 117 YSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSL--IVYYVLSFMFITKVPLFPFHTWLPIVHAE 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 220 APVFGSMILAGVLLKLGGFGLIRLMGFyLVDLGNLWekVMVLGLWGALLTSVMCFRQSDVKSMIAYSSIGHMALVLGGCL 299
Cdd:MTH00062 195 ASSPVSIFLSGYIMKLGLLGVYRFCGF-IFSGSFLG--YLFLCCLFSVFFLITACSELDGKRWLAFLSLSHILVPVLGLF 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 300 SSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKSGLASIPCLSMSMFLLLCVNMSSPPSMSWVSEIMLI 379
Cdd:MTH00062 272 VGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLV 351
|
330 340 350
....*....|....*....|....*....|..
gi 1181491979 380 SSVFYFSVMTFcvsmmipfvvcVFCLYLFVSS 411
Cdd:MTH00062 352 SSSFGVLVYLL-----------FWCFYLFFGG 372
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
60-339 |
4.37e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 80.40 E-value: 4.37e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 60 DSLGSIMVLLSIWIVYLSVIASKDFLFSGGYvnIGVYILLMMTMLMSLVLVFFSSFILVFYIFFEFVLIPMSYMILGWGY 139
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESG--PEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 140 QPERLQAVM-YMLLYTIGASLPLM-VTLIYSF--------LSEGTMSFLVGVSSSSW----WFFEIGGLIFILVFLVKLP 205
Cdd:PRK12667 159 RGDAVEAAIkYALIGAVGTTLYFLaLAFLYATfgtlnmadLSAKIRGLSFPLTGGLAgnppLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 206 VFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLMgfYLVDLGNLWEK---------VMVLGLWGALLTSVMCFRQ 276
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFL--YTIFGISPSLIdfraalspiLIILGAVSAIIGALMMVVQ 316
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1181491979 277 SDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGM 339
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDI 379
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
195-383 |
1.26e-15 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 78.82 E-value: 1.26e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 195 IFILV-FLVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRlmgFYLVDLGNLWEK-----VMVLGLWGALL 268
Cdd:PRK06458 218 VFLLIgFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLR---YYILIDAAIGSDfpgrlLLIFGLLSVLV 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 269 TSVMCFRQSDVKSMIAYSSIGHM-----ALVLGGCLsstlwGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMK 343
Cdd:PRK06458 295 AAFFLLRQRDIKRLFAYSSIEHMgliafALGIGGPL-----GIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIR 369
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1181491979 344 SGLASIPCLSMSMFLLLCVNMSSPPSMSWVSEIMLISSVF 383
Cdd:PRK06458 370 GLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGL 409
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-324 |
6.33e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 73.88 E-value: 6.33e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 110 VFFSSFILVFYIFFEFVLIPmSYMILGWGYQPERLQAVMYMLLYTIGASLPLMVT-LIY----SFLSEGTMSFLVGVSSS 184
Cdd:PRK08668 114 VFLANDLLTLYIFWEIMTFS-SFMMVPMGKKESRKASLKYFVLSAIGAYAMLYAIfLIYaktgTFDFADISQGLINDTST 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 185 SW-WFFeiggLIFILVF-LVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIrlMGFYLVDLGNLWEKV---- 258
Cdd:PRK08668 193 GFaLIV----FLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL--LVLYVLPGTKLFSEFgtyr 266
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1181491979 259 ---------MVLGLWGALLTSVMCFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLF 324
Cdd:PRK08668 267 gvplfnyilAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
110-337 |
7.21e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 73.37 E-value: 7.21e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 110 VFFSSFILVFYIFFEFVLIPmSYMILGWGYQPERLQA-VMYMLLYTIGASLPLM-VTLIYSFLSEGTMSFLVGVSSSSWW 187
Cdd:PRK08375 122 ALLTADLFNLFVFLEIMSLS-SYALVAMGGDRRALAAaRKYLIVGLIGSTFLLIgVGLLYGVTGTLNMADLAGALAENPT 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 188 FFEIGGLIFILVFLvKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLM----GFYLVDLGNLWEKVMVLGL 263
Cdd:PRK08375 201 VVTAFGFVLLALAL-KAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfGGDFRFALGLGWLLAVLAL 279
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1181491979 264 WGALLTSVMCFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSR 337
Cdd:PRK08375 280 LSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTR 353
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
150-324 |
2.73e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 68.44 E-value: 2.73e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 150 MLLYTIGASLplmvtliySFLSEGTMSFlVGVSSSSwwfFEIGGLIFiLVFLVKLPVFFFHLWLPKAHVEAPVFGSMILA 229
Cdd:PRK07234 157 MLFYLIGAVL--------VYQANGTFAF-SGLATAD---PEAFALIA-LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLS 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 230 GVLLKLGGFGLIRLmgfyLVDLGNLWEKVMVLGLWGALLTSVMCFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIeaa 309
Cdd:PRK07234 224 GVVVKAGVFPLVRC----ALDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVGGLYAL--- 296
|
170
....*....|....*
gi 1181491979 310 mlmmvSHGLCSSGLF 324
Cdd:PRK07234 297 -----AHGLVKSTLF 306
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
116-379 |
3.33e-11 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 65.17 E-value: 3.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 116 ILVFYIFFEFVLIpMSYMILGWGYQPERLQAVM-YMLLYTIGASLPLM-VTLIYSFLSEGTMSFLVGVSSS-SWWFFEIG 192
Cdd:PRK08377 130 IFNLFVFMEITAI-TAYALTAYNKTGEAAEASMkYIVLGGIGSSFFLIgVALIYGATGTLNMAHIAQLAGTiDPTVAQVG 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 193 GLIFILVFLVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLMgfYLVDLGNLWEKVMVLGLWGALLTSVM 272
Cdd:PRK08377 209 LALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARIL--YLMQNANGWSSVLKLVIIMATLTVFF 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 273 ----CFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKSGLAS 348
Cdd:PRK08377 287 aelsALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKR 366
|
250 260 270
....*....|....*....|....*....|.
gi 1181491979 349 IPCLSMSMFLLLCVNMSSPPSMSWVSEIMLI 379
Cdd:PRK08377 367 MPLTALALTIGALSTVGIPLFNVFWSKFRII 397
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
110-383 |
8.00e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 63.98 E-value: 8.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 110 VFFSSFILVFYIFFEFVLIPMSYMILGWGYQPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSFLVGVSSSSwwff 189
Cdd:PRK08667 127 VVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAG---- 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 190 eIGGLIFILVFL---VKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIR-LMGFYLVDlgnLWEKVMVL--GL 263
Cdd:PRK08667 203 -ILSLVFLLLFLgfgIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRfLMDVLSPE---LWWGVLILlaGS 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 264 WGALLTSVMCFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIE-----------AAMLMMVSHGLCSSGLFAMVNYNYE 332
Cdd:PRK08667 279 ISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYgldtlallalgGALFHSLNHALFKSLLFLTAGSVVH 358
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1181491979 333 ILGSRGMVFMKSGLASIPCLSmSMFLLLCVNMSS-PPSMSWVSEIMLISSVF 383
Cdd:PRK08667 359 ATGTRNIEKMGGLVKLMPYTS-ALFLVGAVSIAAlPPFNGFASELLLYESFF 409
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
111-324 |
6.13e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 60.92 E-value: 6.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 111 FFSSFILVFYIFFEFVLIpMSYMILGWGYQPERLQAVMYMLLYTIGASLPLMVTLIYSF------LSEGTMSFLVGVSSS 184
Cdd:PRK08676 119 FFSDNLALFWIFAELTTV-FSAMLIAILSARENIDAALKYIFIASTAMIFAFIGLIFLFsltrqaLGTGTLNWTELAAHA 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 185 SWWFFEIGGLIFILVF---LVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLMGFyLVDLGNLWEKVMVL 261
Cdd:PRK08676 198 SLLSPSVLGASFLFIFigfLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSAL-LRQSGAAEQFSNVL 276
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1181491979 262 GLWGALLTSVMCF---RQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLF 324
Cdd:PRK08676 277 IGLGIFSIAVAAFsmlSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLF 342
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
191-327 |
1.15e-09 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 60.22 E-value: 1.15e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 191 IGGLIFILV-FLVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLlKLGGFG-LIRLMGFYLVDLGNLWEKVMVLGlwgALL 268
Cdd:PRK05777 204 LFGLVFLLVgLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAvLLRLLVVAFGGLSEDWQQVLAII---AIA 279
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1181491979 269 T----SVMCFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMV 327
Cdd:PRK05777 280 SmlvgNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFGVI 342
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
191-329 |
8.89e-09 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 57.43 E-value: 8.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 191 IGGLIFILV-FLVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLlKLGGFG-LIRLMGFYLVDLGNLWEKVMVLGlwgALL 268
Cdd:COG1007 203 LLGLVLVLAgLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAaLLRLLVEAFPGLAADWQLLLAVL---AVL 278
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1181491979 269 T----SVMCFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNY 329
Cdd:COG1007 279 SmtvgNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFAVILL 343
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
191-297 |
6.02e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 54.89 E-value: 6.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 191 IGGLIFILVFL---VKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRlMGFYLVDLGNLWEKVMVL--GLWG 265
Cdd:PRK06521 208 WASLVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILR-VVFDLLGAPGWWWGVLVLalGAIS 286
|
90 100 110
....*....|....*....|....*....|..
gi 1181491979 266 ALLTSVMCFRQSDVKSMIAYSSIGHMALVLGG 297
Cdd:PRK06521 287 AVLGVLYALAEHDLKRLLAYSTIENIGIIFVG 318
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
191-403 |
3.83e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 51.95 E-value: 3.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 191 IGGLIFILVFLVKLPVFFFHLWLPKAHVEAPVFGSMILAgVLLKLGGFGLirlmgfyLVDLGNLWEKVMVLGLWGALLTS 270
Cdd:MTH00196 96 IGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLGIFSI-------LVSIGLNVNILLIGGLFSLFVGA 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 271 VMCFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVnynYEILGSRGMVFMKSGLA-SI 349
Cdd:MTH00196 168 IGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSII---LALNVYKNLIIEFSGLSrRL 244
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1181491979 350 PCLSMSMFLLLCVNMSSPPSMSWVSE-IMLISSVFYFSVMTFCVSMMIPFVVCVF 403
Cdd:MTH00196 245 PILAITLALTFLSIAGIPPLVGFLGKwLILLSGVVYQYYLIFLLAVFCSVIAGVY 299
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
120-392 |
5.29e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 51.66 E-value: 5.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 120 YIFFEFVLIPmSYMILGWGYQPERLQAVM-YMLLYTIGASLPLM-VTLIYSFLSEGTMS--FLVGVSSSSWWFFEIGGLI 195
Cdd:PRK12662 136 YVFLEISSIS-SYVLVAMGRDKKALVAAFeYLIIGTIGATFYLIgIGFLYAITGTLNMGdmFLIIQDLPTNRAIQIGVLF 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 196 FILVFLVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLmgFYLVDLGNLW-------EKVMVLGLWGALL 268
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRI--VYDVFKANFVfttlpfnNVFMILAALAIVF 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 269 TSVMCFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAM---VNYNYEILGSRGMVFMKSG 345
Cdd:PRK12662 293 GSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVsgsISYHFGTTKLEDCLNLWKS 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1181491979 346 LASIpclsMSMFLLLCVNM-SSPPSMSWVSEIMLISSV----FYFSVMTFCV 392
Cdd:PRK12662 373 MPKI----TLAFVLLSLSLiGMPPTSGFVAKWYILDAFiksnAWIGLVVLLV 420
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
193-327 |
2.42e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 49.56 E-value: 2.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 193 GLIFILV-FLVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDLGNLWEKV-MVLGLWGALLTS 270
Cdd:TIGR01770 205 GIVLILVgLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQIFlAIIAFLSMLIGN 284
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1181491979 271 VMCFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMV 327
Cdd:TIGR01770 285 FGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFGVL 341
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-409 |
2.87e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 49.71 E-value: 2.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 119 FYIFFEFVLIPMSYMILGWGYQPERLQA-VMYMLLYTIGASLPLM-VTLIYSFLSEGTMSFL-VGVSSSSWWFFEIGGLI 195
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAgIKYMFVGSLASSMVLLgIALLYGQYGTLNMAYLaVKMSENPTVVAKIALAL 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 196 FILVFLVKLPVFFFHLWLPKAHVEAPVFGSMILagVLLKLGGFGLIRLMGFYL----VDLGNLWEKVMVLGLWGALLTSV 271
Cdd:PRK08376 226 FIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGLYALARVLFSIygpaINLATVGWVIIILGCLTMFVGVA 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 272 MCFRQSDVKSMIAYSS---IGHMALVLG------GCLSSTLWG---IEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGM 339
Cdd:PRK08376 304 MAVVQKDVKRLLAYHSvsqIGYMLLGLGvglaalGDPAMASYGeiaLAGGIYHIVNHALYKALLFLTAGAVIYETGTRNL 383
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1181491979 340 VFMkSGLASIPCLSMSMFLLLCVNMSS-PPSMSWVSEIMLISSVFYFSVMTFCVSMmipfVVCVFCLYLFV 409
Cdd:PRK08376 384 NEL-GGLARTMPKTTIAFLIGAAAIVGlPPFNGFASKWLIYESSALFNPILGVIAM----IGSVLTLASFV 449
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
151-327 |
1.43e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 47.73 E-value: 1.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 151 LLYTIGASLPLMVTLIYSFLSEGTMSFLVGVSSSSWwfFEIGGLIFILVFLVKLPVFF------FHLWLPKAHVEAPVFG 224
Cdd:PRK12650 165 LILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVW--AEKPGLTTVVAVLIAVAAFTksaqfpFHFWLPEAMAAITPVS 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 225 SMILAGVLLKLGGFGLIRlmgFYLVDLGNLWEKVM--VLGLWGALLTSVMCFRQSDVKSMIAYSSIGHMALVLGGCLSST 302
Cdd:PRK12650 243 AFLHAAAVVKAGIYLLLR---FSPVFHDVAVWNWLliIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGT 319
|
170 180
....*....|....*....|....*
gi 1181491979 303 LWGIEAAMLMMVSHGLCSSGLFAMV 327
Cdd:PRK12650 320 PFALTAAVVHTLAHALFKSSLFMLI 344
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
116-324 |
4.83e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 45.68 E-value: 4.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 116 ILVFYIFFEFVLIPmSYMILGWGYQ-PERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSFLVGVSSS-----SWWFF 189
Cdd:PRK12647 117 LITLFVFWELTSIT-SFLLIGFNHErEAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASGdvireHPLYL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 190 EIGGLIFILVFlVKLPVFFFHLWLPKAhVEAPVFGS-------MILAGVLLklggfglirLMGFYLVDLGN-LWEkvMVL 261
Cdd:PRK12647 196 AILLLVLGGAF-TKSAQFPFHFWLPNA-MEAPTPVSaylhsatMVKAGIYL---------LARLNPVLGGTpLWQ--TIL 262
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1181491979 262 GLWGA---LLTSVMCFRQSDVKSMIAYSSI---GHMALVLGgcLSSTLwGIEAAMLMMVSHGLCSSGLF 324
Cdd:PRK12647 263 PLFGGltmLTGALLAVRQTDLKLILAYSTVsalGTLVMLLG--LGSEL-AIKAAVLFLVAHSLYKGALF 328
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
120-324 |
4.92e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 45.73 E-value: 4.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 120 YIFFEfVLIPMSYMILGWGYQPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSF------LVGVSSsswwffEIGG 193
Cdd:PRK12665 137 YVGFE-ILLVASYVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMadlavrLDELPS------GTRT 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 194 LIFIL---VFLVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLMGFYLVDlGNLWekvmVLGLWGALLTS 270
Cdd:PRK12665 210 ALFAVllvAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPG-GGLD----TLLMVVALLTM 284
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1181491979 271 VM----CFRQSDVKSMIAY---SSIGHMalVLGGCLSSTLwGIEAAMLMMVSHGLCSSGLF 324
Cdd:PRK12665 285 VVgilgAIAQSDIKRLLSFtlvSHIGYM--VFGIALSTVA-GLSGAIYYVAHHITVQTTLF 342
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
116-324 |
1.45e-04 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 44.37 E-value: 1.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 116 ILVFYIFFEFVLIpMSYMILG-WGYQPERLQAVMYMLLYTIGASLPLMVTLIYSFLSEGTMSF-----LVGVSSSSWWFF 189
Cdd:COG1009 133 LLLLFVFWELVGL-CSYLLIGfWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFsellaAAPTILSSPLLT 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 190 EIGGLIFILVFlVKLPVFFFHLWLPKAhVEAPVFGS-------MILAGVLLklggfgLIRLM-GFYLVDLGNLWekVMVL 261
Cdd:COG1009 212 LILLLLLLGAF-GKSAQFPLHFWLPDA-MEGPTPVSallhaatMVKAGVYL------LARLSpLFALSPVWLTV--VAII 281
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1181491979 262 GLWGALLTSVMCFRQSDVKSMIAYSSI---GHMALVLGgclsstLWGIEAAMLMMVSHGLCSSGLF 324
Cdd:COG1009 282 GAITALFAALIALAQTDIKRVLAYSTVsqlGYMFLALG------VGAYVAALFHLLTHAFFKALLF 341
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
60-409 |
4.95e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 42.50 E-value: 4.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 60 DSLGSIMVLLSIWIVYLSVIASKDFLFSGGYVNIGVYILLMMTMLMSLVLVFFSSFILVFYIFFEFVLIPmSYMILGWGY 139
Cdd:PRK06589 82 EPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTIS-TAFLIGHTR 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 140 QPERLQAVMYML-LYTIGASLPLMVTLIYSFLSEGTMSFlVGVSSSSWWFFEIGGLIFILVfLVKLPVFFFHLWLPKAHV 218
Cdd:PRK06589 161 NNISLSGGYKYLkILMISALLLFLPAVILIYTKTGNLDF-VSGGLFSKNQSIILLLMFIYG-IAKTAIFPVHSWLPAAMV 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 219 EAPVFGSMILAGVLLKLGGFGLIRLMGF-----YLVDLGNLWEKVMVLGLWGALLTSVMCFRQSDVKSMIAYSSIGHMAL 293
Cdd:PRK06589 239 AHYPVSALLHAVIVVKTGLFCIYKILLYifglsYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSL 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 294 VLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFMKSGLASIPcLSMSMFLLLCVNM-SSPPSMSW 372
Cdd:PRK06589 319 ALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFP-LISFIISISSLSLiGIPIFSGF 397
|
330 340 350
....*....|....*....|....*....|....*..
gi 1181491979 373 VSEIMLISSVFYFSVMTFCVSMMIPFVVCVFCLYLFV 409
Cdd:PRK06589 398 ISKFLILLAASEQNQPWLSIIVMLVVIASSILSALYL 434
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
116-327 |
9.56e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 41.83 E-value: 9.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 116 ILVFYIFFEFVLIpMSYMILGwgYQPERL---QAVMYMLLYTIGASLPLMVTLIysflsegtmsfLVGVSSSSWWFFEI- 191
Cdd:PRK12644 128 LLLLYVFWELTTV-LSFLLIG--HYAERAasrRAALQALLVTTAGGLAMLVGII-----------ILGQAAGTYRLSELl 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 192 -----GGLIFILVFLV------KLPVFFFHLWLPKAhVEAPVFGS-------MILAGVLL--KLG-GFGLIRLMGFYLVD 250
Cdd:PRK12644 194 adpptGPAVSVAVVLIlvgalsKSAIVPFHFWLPGA-MAAPTPVSaylhaaaMVKAGIYLvaRLApGFADVPVWRPTVLV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 251 LGNLwekVMVLGLWGALltsvmcfRQSDVKSMIAY---SSIGHMALVLG-GCLSSTLwgieAAMLMMVSHGLCSSGLFAM 326
Cdd:PRK12644 273 LGLA---TMLLGGWRAL-------RQHDLKLILAYgtvSQLGFLTVLVGiGTRDAAL----AGLAMLLAHALFKAALFLV 338
|
.
gi 1181491979 327 V 327
Cdd:PRK12644 339 V 339
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
194-371 |
3.20e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 39.93 E-value: 3.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 194 LIFILVFLVKLPVFFFHlWLPKAHVEAPVFGSMILAGVLLKLGGFGLIRLMGFYLVD--------LGNLWEKVMVLGLWG 265
Cdd:PRK12663 211 LLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQerellhplLATMAAITMVIGALG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 266 ALLtsvmcfrQSDVKSMIAY---SSIGHMALVLGgclSSTLWGIEAAMLMMVSHGLCSSGLFAMVNYNYEILGSRGMVFM 342
Cdd:PRK12663 290 ALA-------YKDIRRIAGYqviSSIGFILLGLA---LGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYL 359
|
170 180
....*....|....*....|....*....
gi 1181491979 343 kSGLASIPCLSMSMFLLLCVNMSSPPSMS 371
Cdd:PRK12663 360 -GGLYRKEPLFGALFLILIFAIGGLPPFS 387
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
117-242 |
3.43e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 39.88 E-value: 3.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 117 LVFYIFFEFVLIPMSYMILGWGYQPERLQAVMYMLLYTIGASLpLMVTLIYSFLSEGTMSF--LVGVSSSSWWffeiggL 194
Cdd:PRK12668 116 LTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVL-LLAGILLHYAETGSFAFgaIAGLGGTAAW------L 188
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1181491979 195 IFIlVFLVKLPVFFFHLWLPKAHVEAPVFGSMILAGVLLKLGGFGLIR 242
Cdd:PRK12668 189 ILI-GFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR 235
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
117-329 |
3.74e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 39.74 E-value: 3.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 117 LVFYIFFEFVLIPMSYMILGWGYQPERLQAVMYMLLYTIGASLPLMV--TLIYSFLSEGTMSFLVG----VSSSSWWFFE 190
Cdd:PRK12646 133 ILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVgfIMLYIMTGTNNITEILGqadhIKNHGLFIPM 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 191 IggLIFILVFLVKLPVFFFHLWLPKAhVEAPVFGSMIL-AGVLLKLGGFGLIRLMGfyLVDLGNLW-EKVMVLGLWGALL 268
Cdd:PRK12646 213 I--FMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTP--LLGLSNMYiYIVTFVGLITMLF 287
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1181491979 269 TSVMCFRQSDVKSMIAYSSIGHMALV-----LGGCLSSTLWGIEAAMLMMVSHGlcssGLFAMVNY 329
Cdd:PRK12646 288 GSITALKQWDLKGILAYSTISQLGMImamvgIGGGYAQHQQDAIASIYVFVLFA----ALFHLMNH 349
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
120-324 |
3.80e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 39.45 E-value: 3.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 120 YIFFEFVLIPmSYMILGWGYQPERLQAVM-YMLLYTIGASLPLM-VTLIYSFLseGTMSF------LVGVSSSSWWFFEI 191
Cdd:PRK12666 135 FVFFEVLLAA-SYGLLLHGSGRARVRAGLhYVAINLVASSLFLIgVGLIYGVT--GTLNMadlaqrIAQLPAADRALLEA 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 192 GGLIFILVFLVKLPVFFFHLWLPKAHVEAPVFGSMILAgVLLKLGGFGLIRLMGF-------YLVDLGNLWEkvmvlgLW 264
Cdd:PRK12666 212 GAALLLVVFLIKAAMWPLNFWLPPAYAAASAPVAALFA-IMTKVGIYAILRLSTLlfgpeagASAGFGQDWL------LP 284
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1181491979 265 GALLTSVM----CFRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLF 324
Cdd:PRK12666 285 GGLATLAFgaigVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALF 348
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
193-327 |
6.54e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 39.07 E-value: 6.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491979 193 GLIFILV-FLVKLPVFFFHLWLPKAHVEAPVFGSMILAgVLLKLGGFGLIRLMGFYLVDLGNLWEKVMVLGLWGALltsv 271
Cdd:MTH00198 301 GYLFITVaILFKLAAAPFHMWTPDVYEGAPTPTTALIA-IIPKFTVYILLTSLVITSKLLLSVAIISLVVGAFGAL---- 375
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1181491979 272 mcfRQSDVKSMIAYSSIGHMALVLGGCLSSTLWGIEAAMLMMVSHGLCSSGLFAMV 327
Cdd:MTH00198 376 ---NQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASFTVI 428
|
|
| |
