|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
29-569 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 531.34 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 29 EKTVIFEWEVFSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSIL 108
Cdd:MTH00151 29 GISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMNLLIFIPSLP 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 109 GLMIGWDGLGITSFVLVIYYQNSKSASAGMLTVLMNRVGDCLLIIAISVFMVQGQWSMCSMNDYCAMVIVSWLVFFSSIT 188
Cdd:MTH00151 109 SLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSILSMWDFKLSGWLGLLLVLAAMT 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 189 KSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVI 268
Cdd:MTH00151 189 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKII 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 269 ALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGNMWFSMPLTISCFNIANLSLCG 348
Cdd:MTH00151 269 ALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCG 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 349 MPFLNGFYSKDLILESYITGVIGYVVLVMLVLGTMATLFYSVRLSYLVLWVNNCGHSFHYLNNDDKAMNYGMMMLVGGAV 428
Cdd:MTH00151 349 APFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGAL 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 429 VGSLYLQGVLLELNYEFFLNSSLvmnALLAAAVIsnILNLVLSVNLAEKNLFFWFWELKLYFFSSMWFLENLSSHPLIYL 508
Cdd:MTH00151 429 IGGKLLQSLFEGFSEEFFLPSYL---KLLIGFVI--LLGLFLSFGFWDSGFSSSKMVKLSFFFSSMWFLSPLSSQPLKSL 503
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1181491977 509 GLNSSNFYHKSLDQGWIELVGGLGSYSVVSKITLLHQKFQFQMMTLLIVMSLLFMLSMVWI 569
Cdd:MTH00151 504 SLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLVVI 564
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
29-569 |
2.53e-164 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 479.64 E-value: 2.53e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 29 EKTVIFEWEVFSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSIL 108
Cdd:MTH00165 29 DYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLI 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 109 GLMIGWDGLGITSFVLVIYYQNSKSASAGMLTVLMNRVGDCLLIIAISVFMVQGQWS----MCSMNDYCAMVIVSWLVFF 184
Cdd:MTH00165 109 SILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFGSWNfifyLDFMKNSFEMLLIGLLIML 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 185 SSITKSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLeMSKTLQFVVIFLSCCTLVLAGVGANFEMDL 264
Cdd:MTH00165 189 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLL-FSSFFSKFLLLISLLTMFMAGLGANFEFDL 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 265 KKVIALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGNMWFSMPLTISCFNIANL 344
Cdd:MTH00165 268 KKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNL 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 345 SLCGMPFLNGFYSKDLILESYITGVIGYVVLVMLVLGTMATLFYSVRLSYLVLWVNNCGHSFHYLNNDDKAMNYGMMMLV 424
Cdd:MTH00165 348 SLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLL 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 425 GGAVVGSLYLQGVLLELNYEFFLNSSLVMNALLaAAVISNILNLVLSVNLAEKNLFFWFWELKLYFFSSMWFLENLSSHP 504
Cdd:MTH00165 428 FMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLF-VILLGGWLGYELSLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYG 506
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1181491977 505 LIYLGLNSSNFYHKSLDQGWIELVGGLGSYSVVSKITLLHQKFQFQMMTLLIVMSLLFMLSMVWI 569
Cdd:MTH00165 507 ISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLLWMIILLLL 571
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
30-567 |
1.62e-153 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 451.79 E-value: 1.62e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 30 KTVIFEWEVFSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILG 109
Cdd:MTH00209 28 KIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLIFVPNLIT 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 110 LMIGWDGLGITSFVLVIYYQNSKSASAGMLTVLMNRVGDCLLIIAISVFMVQGQWSMCSMN-DYCAMVIVSWLVFFSSIT 188
Cdd:MTH00209 108 LLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWNIFYLNfNSNLGSVISVLIVLAAMT 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 189 KSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVI 268
Cdd:MTH00209 188 KSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKII 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 269 ALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGNMWFSMPLTISCFNIANLSLCG 348
Cdd:MTH00209 268 ALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCG 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 349 MPFLNGFYSKDLILESYITGVIGYVVLVMLVLGTMATLFYSVRLSYLVLWVNNCGHSFHYLNNDDKAMNYGMMMLVGGAV 428
Cdd:MTH00209 348 IPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSI 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 429 VGSLYLQGVlleLNYEFFlnsSLVMNALLAAAVISNILNLVLSVNLAEKNLFFWFWELKL-YFFSSMWFLENLSSHPLIY 507
Cdd:MTH00209 428 TGGSVMSWV---MVPSVN---SVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKGYKVnYFLSQMWFLPDLSSQPVNK 501
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 508 LGLNSSNFYHKSLDQGWIELVGGLGSYSVVSKITLLHQKFQFQMMTLLIVMSLLFMLSMV 567
Cdd:MTH00209 502 FTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGVI 561
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
30-570 |
8.28e-152 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 447.67 E-value: 8.28e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 30 KTVIFEWEVFSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILG 109
Cdd:MTH00207 33 KTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMI 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 110 LMIGWDGLGITSFVLVIYYQNSKSASAGMLTVLMNRVGDCLLIIAISVFMVQGQWSMCSMNDYCAMVIVSWLVFFSSITK 189
Cdd:MTH00207 113 LLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSITNMWQTDMNNYIALSIMIAAMTK 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 190 SAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIA 269
Cdd:MTH00207 193 SAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIA 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 270 LSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGNMWFSMPLTISCFNIANLSLCGM 349
Cdd:MTH00207 273 LSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGS 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 350 PFLNGFYSKDLILESYITGVIGYVVLVMLVLGTMATLFYSVRLSYLVLWVNNCGHSFHYLNNDDKAMNYGMMMLVGGAVV 429
Cdd:MTH00207 353 PFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAIT 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 430 GSLYLQGVLLELNYEFFLNSSLVMNALLaaAVISNILNLVLSVNLAEKNLFFWFWELKLYFFS-SMWFLENLSSHPLIYL 508
Cdd:MTH00207 433 SGSALNWWLPTPQEEPILPLQYKLLPLL--VVTLGALLAWLFTTPNITKTPLLINNPLSHFAScLMWFLVPLSSQFIMST 510
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1181491977 509 GLNSSNFYHKSLDQGWIELVGGLGSYSVVSKITLLHQKFQFQMMTLLIVMSLLFMLSMVWIA 570
Cdd:MTH00207 511 PMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMMSFVLLTIIIIMT 572
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
31-569 |
1.48e-105 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 329.60 E-value: 1.48e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 31 TVIFEWEVFSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGL 110
Cdd:MTH00211 56 TILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 111 MIGWDGLGITSFVLVIYYQNSKSASAGMLT-VLMNRVGDCLLIIAISVFMVQGQ-WSMCSM-NDYCAMVIVSWLVFFSSI 187
Cdd:MTH00211 136 FIGWEGVGIMSFLLISWWYGRSDANTAALQaVIYNRIGDIGLLLSMVWLLLNLNsWEISQLfILNLDLTLFLLGLLLAAM 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 188 TKSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKV 267
Cdd:MTH00211 216 GKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKI 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 268 IALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGNMWFSMPLTISCFNIANLSLC 347
Cdd:MTH00211 296 VAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALM 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 348 GMPFLNGFYSKDLILESYITGVIGYVVLVMLVLGTMATLFYSVRLSYLVLWVNNCGHSFHYLNNDDKAMNYGMMMLVGGA 427
Cdd:MTH00211 376 GFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGS 455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 428 VVGslylqGVLLELNYEFFLNSSLVMNALLA-AAVISNILNLVLSVNLAekNLFFWFWELKLYFFSSMWFLENLSSHPLI 506
Cdd:MTH00211 456 ILA-----GFIITSNLPPEKPEILSLPFLLKlMPLLVTIVGLLLGLELV--NLTHKQLKTSTLSFSNMLGYYPPIIHRLL 528
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1181491977 507 --YLGLNSSNFYHKSLDQGWIELVGGLG---SYSVVSKITLLHQKFQFQMMTLLIVMSLLFMLSMVWI 569
Cdd:MTH00211 529 pkLSLKWGQTLSTHLMDLGWYEKLGPKGlgvNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLFLL 596
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
31-472 |
6.56e-97 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 307.46 E-value: 6.56e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 31 TVIFEWEVFSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGL 110
Cdd:COG1009 57 VVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLL 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 111 MIGWDGLGITSFVLV-IYYQNSKSASAGMLTVLMNRVGDCLLIIAIS-VFMVQGQWSMCSMNDYCAMVIVSW-------L 181
Cdd:COG1009 137 FVFWELVGLCSYLLIgFWYEKPSARRAARKAFLVTRVGDLGLLLGILlLGAIAGTLNFSELLAAAPTILSSPlltlillL 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 182 VFFSSITKSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFE 261
Cdd:COG1009 217 LLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQ 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 262 MDLKKVIALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNgGTQDIRVFGNMWFSMPLTISCFNI 341
Cdd:COG1009 297 TDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLI 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 342 ANLSLCGMPFLNGFYSKDLILES-YITGVIGYVVLVMLVLGTMATLFYSVRLSYLVLWVNNCGHSFHYLNNDDKAMNYGM 420
Cdd:COG1009 376 GALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPL 455
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1181491977 421 MMLVGGAVVGSLYLQGVLlelnYEFFLNSSLVMNAL-LAAAVISNILNLVLSV 472
Cdd:COG1009 456 VVLAVLSLVLGLLLPGLL----EGLLAPAAVLGGELhLAHGLLLNALPLLLSL 504
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
36-529 |
9.55e-85 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 275.70 E-value: 9.55e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 36 WEVFSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWD 115
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 116 GLGITSFVLV-IYYQNSKSASAGMLTVLMNRVGDCLLIIAI-SVFM------VQGQWSMCSMNDYCAMVIVSWLVFFSSI 187
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIfLIFWyfgtlnFQEVFALAPGAFFSALTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 188 TKSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKV 267
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 268 IALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGNMWFSMPLTISCFNIANLSLC 347
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 348 GMPFLNGFYSKDLILESYITGVIGYVVLVMLVLGTMATLFYSVRLSYLVLWVNNCGHSFHYLNNDDKAMNYGMMMLVGGA 427
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 428 VV-GSL------YLQGVL---LELNYEFFLNSSLVMNALLAAAVISNILNLVLSVNLAEKNLFFWFWELKLY-FFSSMWF 496
Cdd:TIGR01974 465 VFaGFFivplfeFLKGVLptsAEPALEHHHVPALEIWSPTAVAILGILLAYLLYLGNPTLPAKIAQRHSGLYrLLLNKWY 544
|
490 500 510
....*....|....*....|....*....|...
gi 1181491977 497 LENLSSHPLIYLGLNSSNFYHKSLDQGWIELVG 529
Cdd:TIGR01974 545 FDELYDKVFVKPYLFLGKLLWKDPDDKIIDGFG 577
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
36-396 |
4.39e-84 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 274.34 E-value: 4.39e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 36 WEVFSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWD 115
Cdd:PRK06590 66 WTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 116 GLGITSFVLV-IYYQNSKSASAGMLTVLMNRVGDCLLIIAI-------------SVFMVQGQWSMCSMNdycAMVIVSWL 181
Cdd:PRK06590 146 GVGLCSYLLIgFWYKKPSAGAAAMKAFIVNRVGDVGLALGIfllfaefgslnydEVFAAAPQFFGLGWS---ALTLICLL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 182 VFFSSITKSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFE 261
Cdd:PRK06590 223 LFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQ 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 262 MDLKKVIALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGNMWFSMPLTISCFNI 341
Cdd:PRK06590 303 TDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLI 382
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1181491977 342 ANLSLCGMPFLNGFYSKDLILES-YITGviGYVVLVMLVLGTMATLFYSVRLSYLV 396
Cdd:PRK06590 383 GTLALIGIPPFAGFFSKDEILEAaFANG--HINLFVAGLVGAFLTAFYSFRLIFLV 436
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
31-397 |
6.39e-80 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 262.79 E-value: 6.39e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 31 TVIFEWEVFSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGL 110
Cdd:MTH00004 61 SITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 111 MIGWDGLGITSFVLVIYYQNSKSA-SAGMLTVLMNRVGDCLLIIAISVF-MVQGQWSMCSMNDYCAMVIVSWLVFFSSIT 188
Cdd:MTH00004 141 FIGWEGVGIMSFLLIGWWSGRAEAnTAALQAIIYNRIGDIGLILSMAWLaMTLNTWEIQQLFSPTQTPTLPLLGLILAAT 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 189 -KSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKV 267
Cdd:MTH00004 221 gKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKI 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 268 IALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGNMWFSMPLTISCFNIANLSLC 347
Cdd:MTH00004 301 IAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALM 380
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1181491977 348 GMPFLNGFYSKDLILESYITGVIGYVVLVMLVLGTMATLFYSVRLSYLVL 397
Cdd:MTH00004 381 GTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQ 430
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
33-561 |
8.55e-79 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 260.29 E-value: 8.55e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 33 IFEWevFSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMI 112
Cdd:MTH00208 88 LSNW--LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFI 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 113 GWDGLGITSFVLVIYYQNSKSA-SAGMLTVLMNRVGDCLLIIAISVFMVQ-GQWSMCSMNDYCAMV--IVSWLVF---FS 185
Cdd:MTH00208 166 GWEGVGFLSFLLISWWTTRNDAnSSALQAVIYNRIGDIGIILFLSLSLINfNSWNLNEILSLNNSNsfLINILLFgilLA 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 186 SITKSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLK 265
Cdd:MTH00208 246 AAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIK 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 266 KVIALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGNMWFSMPLTISCFNIANLS 345
Cdd:MTH00208 326 KIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLA 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 346 LCGMPFLNGFYSKDLILESYITGVIGYVVLVMLVLGTMATLFYSVRLSYLVLWVNNCGHSFHYLNNDDKAMNYGMMMLVG 425
Cdd:MTH00208 406 LMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAI 485
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 426 GAVVGSLYLQGVLLELNyEFFLNSSLVMNALL---AAAVISNILNLVLSVNLAEKNLFfwfwelklYFFSSMWFLENLSS 502
Cdd:MTH00208 486 GTIISGWFFSNFVFNLP-PLTLPLILKSLPLIvtiIGAAFSFSFLLSLSSNPINSNFF--------SFLSNQWFFVNISH 556
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 503 HPLIYLGLNSS-NFYHKSLDQGWIELVGGLGSYSVVSKITLLHQKFQFQMMTLLIVMSLL 561
Cdd:MTH00208 557 SIIISFSFFTSlFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTL 616
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
31-394 |
4.93e-74 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 247.13 E-value: 4.93e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 31 TVIFEWEVFSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGL 110
Cdd:MTH00066 59 SITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 111 MIGWDGLGITSFVLV-IYYQNSKSASAGMLTVLMNRVGDCLLIIAISVFMVQ-GQWS---MCSMNDYCAMVIVSWLVffS 185
Cdd:MTH00066 139 FIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNtNSWElqqIFLLNDNSTLPLLGLIL--A 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 186 SITKSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLK 265
Cdd:MTH00066 217 AAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIK 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 266 KVIALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGNMWFSMPLTISCFNIANLS 345
Cdd:MTH00066 297 KIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLA 376
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1181491977 346 LCGMPFLNGFYSKDLILESYITGVIGYVVLVMLVLGTMATLFYSVRLSY 394
Cdd:MTH00066 377 LTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIY 425
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
31-397 |
1.53e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 237.83 E-value: 1.53e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 31 TVIFEWEVFSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGL 110
Cdd:MTH00108 61 MIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 111 MIGWDGLGITSFVLV-IYYQNSKSASAGMLTVLMNRVGDCLLIIAISVFMVQG------QWSMCSMNDYcAMVIVSWLVf 183
Cdd:MTH00108 141 FIGWEGVGIMSFLLIgWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLnswdlqQIFMLNPNNS-NLPLMGLLL- 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 184 fSSITKSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMD 263
Cdd:MTH00108 219 -AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQND 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 264 LKKVIALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGNMWFSMPLTISCFNIAN 343
Cdd:MTH00108 298 IKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGS 377
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1181491977 344 LSLCGMPFLNGFYSKDLILESYITGVIGYVVLVMLVLGTMATLFYSVRLSYLVL 397
Cdd:MTH00108 378 LALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFAL 431
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
27-400 |
8.47e-67 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 228.04 E-value: 8.47e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 27 NLEKTVIFEWEVFSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPS 106
Cdd:MTH00020 53 NSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDN 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 107 ILGLMIGWDGLGITSFVLVIYY----QNSKSASAGMLtvlMNRVGDCLLIIAISVFMVQ-------GQWSMCSMNDYCAM 175
Cdd:MTH00020 133 YLQLFIGWEGVGLCSYLLINFWltriEANKAAIKAML---VNRVGDIGLLLAMFLLWDRfgsldfsSVFNMVVSAPSSDI 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 176 VIVSWLVFFSSITKSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAG 255
Cdd:MTH00020 210 TLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 256 VGANFEMDLKKVIALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGNMWFSMPLT 335
Cdd:MTH00020 290 TVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLT 369
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1181491977 336 ISCFNIANLSLCGMPFLNGFYSKDLILESYITGVIGYVVLVMLVLGTMATLFYSVRLSYLVLWVN 400
Cdd:MTH00020 370 YIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSN 434
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
44-396 |
2.29e-66 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 227.02 E-value: 2.29e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 44 VNASFPIlvDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITSFV 123
Cdd:MTH00137 80 INISFKF--DHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFL 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 124 LV-IYYQNSKSASAGMLTVLMNRVGDCLLIIAISVFmvqgqwsmcsmndycAMVIVSW---LVFFSS----IT------- 188
Cdd:MTH00137 158 LIgWWYGRADANTAALQAVIYNRVGDIGLILAMAWM---------------ATNLNSWeiqQIFALSkdfdLTlpllgli 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 189 -----KSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMD 263
Cdd:MTH00137 223 laatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQND 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 264 LKKVIALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGNMWFSMPLTISCFNIAN 343
Cdd:MTH00137 303 IKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGS 382
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1181491977 344 LSLCGMPFLNGFYSKDLILESYITGVIGYVVLVMLVLGTMATLFYSVRLSYLV 396
Cdd:MTH00137 383 LALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFV 435
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
47-446 |
3.74e-65 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 221.71 E-value: 3.74e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 47 SFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITSFVLVI 126
Cdd:MTH00095 38 SLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 127 YYQNSKSASAGMLTVLMNRVGDCLLIIAISVFMVQGQWSMCSMNDYCAMVIvswLVFFSSITKSAQYPFSSWLPAAMAAP 206
Cdd:MTH00095 118 FYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSSYYFFSFSFFSSSMIL---MLLLTSFTKSAQFPFSSWLPKAMSAP 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 207 TPVSALVHSSTLVTAGIFLMFRFSSLLeMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIALSTLSQLGMMMLSLGFL 286
Cdd:MTH00095 195 TPVSSLVHSSTLVTAGLILLMNFSYLI-LNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSG 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 287 MPWLALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGN-----MWFSMPLTISCFNianlsLCGMPFLNGFYSKDLI 361
Cdd:MTH00095 274 LSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNngnlpMFIQLQLLVTLFC-----LCGLMFTSGMVSKELI 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 362 LESYITGVIGYVVLVMLVLGTMATLFYSVRLSYLVLwvnNCGHSFHYLNNDDKAMNYGMMMLVGGAVVGSLYLQGVLLEL 441
Cdd:MTH00095 349 LELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFF---LSFSKVVNVYSSSVLMNFLSLMLVFFSVFFLWWLNFNLLNL 425
|
....*
gi 1181491977 442 NYEFF 446
Cdd:MTH00095 426 PSLFL 430
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
27-400 |
9.53e-65 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 222.58 E-value: 9.53e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 27 NLEKTVIFEWEVFSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPS 106
Cdd:MTH00210 53 NGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDN 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 107 ILGLMIGWDGLGITSFVLV-IYYQNSKSASAGMLTVLMNRVGDCLLIIAIsvFMVQGQW----------SMCSMNDYCAM 175
Cdd:MTH00210 133 YVQLFIGWEGVGLCSYLLInFWLTRIKANKAAIKAMLINRVGDIGLVLAM--IMILKEFgtlefstissLLVTNINKESL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 176 VIVSWLVFFSSITKSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAG 255
Cdd:MTH00210 211 TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAA 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 256 VGANFEMDLKKVIALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGNMWFSMPLT 335
Cdd:MTH00210 291 TVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFT 370
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1181491977 336 ISCFNIANLSLCGMPFLNGFYSKDLILE-SYITGVIGYVVLvmlvLGTMA---TLFYSVRLSYLVLWVN 400
Cdd:MTH00210 371 YVMILIGSLSLMGFPYLTGFYSKDLILElTYDKYYIAFAYW----LGSFSallTAFYSIRLIYLTFITN 435
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
34-362 |
1.50e-57 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 204.10 E-value: 1.50e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 34 FEWEvfSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIG 113
Cdd:PRK07376 73 FEWA--SAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVF 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 114 WDGLGITSFVLV-IYYQNSKSASAGMLTVLMNRVGDCLLIIAI-SVFMVQGQWSMCSMNDYC------------AMVIVS 179
Cdd:PRK07376 151 WELVGMCSYLLVgFWYDRKGAADAAQKAFVVNRVGDFGLLLGIlGLFWATGSFDFDGIADRLselvssgavsgwLALLLC 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 180 WLVFFSSITKSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGAN 259
Cdd:PRK07376 231 ILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIAL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 260 FEMDLKKVIALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNGGT--------QDIRVFGNMWFS 331
Cdd:PRK07376 311 TQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVvghdpvlaQDMRLMGGLRKY 390
|
330 340 350
....*....|....*....|....*....|.
gi 1181491977 332 MPLTISCFNIANLSLCGMPFLNGFYSKDLIL 362
Cdd:PRK07376 391 MPITAITFLIGCLAISGIPPFAGFWSKDEIL 421
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
50-568 |
1.86e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 192.87 E-value: 1.86e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 50 ILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITSFVLVIYYQ 129
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 130 NSKSAS-AGMLTVLMNRVGDCLLIIAI---------------------SVFMVQGQWSMCSMNDYCA-MVIVSWLVFFSS 186
Cdd:MTH00032 156 TRIQANkAAIKAIVVNRVGDVGVILGMvliyktigsldfltfnggsvgSGIMDRGYYGGGAYESPLApFAIIGILLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 187 ITKSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKK 266
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKK 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 267 VIALSTLSQLGMMMLSLGFLMPW-LALFHLFSHALFKALLFLCAGSMIHS-NGGTQDIRVFGNMWFSMPLTISCFNIANL 344
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALLFLSAGSVIHStTVDEQDMRKMGGLIHSIPFTYTMMLIGSF 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 345 SLCGMPFLNGFYSKDLILE----------------SYITGVIGYV-----------------VLVMLVLGTMA---TLFY 388
Cdd:MTH00032 396 SIMGLPYLTGFYSKDLILEltysgrnmgipfgsslLKIQGDIGIKkddrgsiggpegypsrgSAFAFWLGTVAallTAFY 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 389 SVRLSYLVLWV--NNCGHSF--HYLNNDDKAMNYGMMMLVGGAVVGSLYLQGVLLElNYEFFLNSSLVMNALLAAAVISN 464
Cdd:MTH00032 476 SIRLVYITFIIspNSPKESLisSHINIVDKRVLTVLSLLCFGAIFVGYLIQDILIG-DIEHPIVPPLIKVMPTLMGLFGM 554
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 465 ILNLVLSVNLAEKNLFFWF------WELKLYFFSSMWFLENLSSHPLIYLGLNSSNFY--HKSLDQGWIELVGGLGSYSV 536
Cdd:MTH00032 555 GLCLWAQKGTREGELYWGFdpigpsFLLSIYSFLGGAWQGDHLINKLVAIPLFSFGHWgiYKTLDRGWLELFGPQGISTI 634
|
570 580 590
....*....|....*....|....*....|....
gi 1181491977 537 VSKITLLHQKFQFQMMT--LLIVMSLLFMLSMVW 568
Cdd:MTH00032 635 ALRVSQFISNLQSGVISryALVLLSFTIIFLALW 668
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
43-398 |
1.67e-50 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 186.11 E-value: 1.67e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 43 SVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYM-KEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITS 121
Cdd:PRK12646 67 TLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 122 FVLVIYYQNSKSASAGMLTVLMNRV--GDCLLIIAISVFMVQGQWSMCSM-------NDYCAMVIVSWLVFFSSITKSAQ 192
Cdd:PRK12646 147 FLLISYWYNNGDSQFGAIQSFMITVfgGLALLVGFIMLYIMTGTNNITEIlgqadhiKNHGLFIPMIFMFLLGAFTKSAQ 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 193 YPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIALST 272
Cdd:PRK12646 227 FPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYST 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 273 LSQLGMMMLSLGF-----------------LMPWLALFHLFSHALFKALLFLCAGSMIHSnGGTQDIRVFGNMWFSMPLT 335
Cdd:PRK12646 307 ISQLGMIMAMVGIgggyaqhqqdaiasiyvFVLFAALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKM 385
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1181491977 336 ISCFNIANLSLCGMPFLNGFYSKDLILESYITG--------VIGYVVLVMLVLGTMATLFYSVRLSYLVLW 398
Cdd:PRK12646 386 NLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTgqlsqfslISMIIIVFIGVIASIFTFTYALYMVKEVFW 456
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-396 |
8.70e-50 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 177.65 E-value: 8.70e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 52 VDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITSFVLVIYYQNS 131
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 132 KSASAGMLTVLMNRVGDCLLIIAIS-VFMVQGQWSMCSM------NDYCAMVIVSWLVFFSSITKSAQYPFSSWLPAAMA 204
Cdd:COG0651 154 EALRAGLKYLILNLVGSALFLLGVGlLYGATGTLNMADLaarlaeLDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 205 -APTPVSALVhSSTLVTAGIFLMFRFSSLL---EMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIALSTLSQLGMMM 280
Cdd:COG0651 234 aAPSPVSALL-SGLLTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYIL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 281 LSLGFLMPWL---ALFHLFSHALFKALLFLCAGSMIHSnGGTQDIRVFGNMWFSMPLTISCFNIANLSLCGMPFLNGFYS 357
Cdd:COG0651 313 LGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERA-TGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVS 391
|
330 340 350
....*....|....*....|....*....|....*....
gi 1181491977 358 KDLILESYITGViGYVVLVMLVLGTMATLFYSVRLSYLV 396
Cdd:COG0651 392 KWLLLQAALEAG-AWLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
43-364 |
5.06e-49 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 181.66 E-value: 5.06e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 43 SVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITSF 122
Cdd:PRK12647 53 SLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 123 VLVIYYQNSKSASAGMLTVLMNRVGDCLLIIA--ISVFMVQGQWSMCS---MND-------YCAMVIvswLVFFSSITKS 190
Cdd:PRK12647 133 LLIGFNHEREAARRAALQALLVTGGGGLALLAglILLGNVTGTYSLSEllaSGDvirehplYLAILL---LVLGGAFTKS 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 191 AQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIAL 270
Cdd:PRK12647 210 AQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAY 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 271 STLSQLGMMMLSLGFLMPWL---ALFHLFSHALFKALLFLCAGSMIHSNgGTQDIRVFGNMWFSMPLTISCFNIANLSLC 347
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDHET-GTRDITKLGGLRRAMPITAAAALLAALSMA 368
|
330
....*....|....*..
gi 1181491977 348 GMPFLNGFYSKDLILES 364
Cdd:PRK12647 369 GLPPLFGFLAKELIYEA 385
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
39-392 |
2.01e-48 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 181.01 E-value: 2.01e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 39 FSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLG 118
Cdd:PRK12650 64 LLGNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 119 ITSFVLViyyqnSKSASAG----MLTVLMNRVGDCLLIIAISVFMVQ-GQWSMCSM-------NDYCAMVIVSWLVFFSS 186
Cdd:PRK12650 144 LASFFLI-----ARSGSGGeagsIRTLILTFFGGLTLLAAVAIAATQtGTTSLSGIlhsdvwaEKPGLTTVVAVLIAVAA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 187 ITKSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKK 266
Cdd:PRK12650 219 FTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKK 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 267 VIALSTLSQLGMMMLSLGFLMPW---LALFHLFSHALFKALLFLCAGSMIHsNGGTQDIRVFGNMWFSMPLTISCFNIAN 343
Cdd:PRK12650 299 LTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDH-QAGTRDIRRLGSLWRRMPFTFVSVTIAA 377
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1181491977 344 LSLCGMPFLNGFYSKDLILESYITGVIG--YVVLVMLV--LGTMATLFYSVRL 392
Cdd:PRK12650 378 LSMAAVPPLFGFVSKEGMLTAFLEAPGGnaGVVLLLVGaaLGAVFTFAYSARL 430
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-391 |
8.42e-46 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 173.45 E-value: 8.42e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 53 DSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITSFVLVIYYQNSK 132
Cdd:PRK12648 75 DGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRA 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 133 SASAG--MLTVLMNRVGDCLLI-------IA----ISVFMVQGQ------WsmcsmndYCAMVIvswLVFFSSITKSAQY 193
Cdd:PRK12648 155 DARRGarMALTVTGAGGLALLAgvlllghIVgsydLDVVLAAGDlirahpL-------YPPALV---LILLGAFTKSAQF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 194 PFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIALSTL 273
Cdd:PRK12648 225 PFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 274 SQLGMMMLSLGFLMPW---LALFHLFSHALFKALLFLCAGSMIHSNgGTQDIRVFGNMWFSMPLTISCFNIANLSLCGMP 350
Cdd:PRK12648 305 SHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHET-GTRDMRRLSGLRRLMPITATLAMVAAAAMAGVP 383
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1181491977 351 FLNGFYSKDLIL-ESYITGVIGYVVLVMLVLGTMATLF---YSVR 391
Cdd:PRK12648 384 LLNGFLSKEMFFaETLDTHLLGSLDWLLPVAATLAGAFsvaYSLR 428
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-391 |
1.60e-43 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 166.64 E-value: 1.60e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 53 DSVSMMFCVVVWYISSAVMIYVSDYMKEDL-FLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITSFVLVIYYQNS 131
Cdd:PRK12644 73 DALAALMSLLVLGVGALVLLYCARYFDDDEpRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAER 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 132 KSA-----------SAGMLTVLmnrVGdcllIIAISVfmVQGQWSMCSM-NDYCAMVIVSW---LVFFSSITKSAQYPFS 196
Cdd:PRK12644 153 AASrraalqallvtTAGGLAML---VG----IIILGQ--AAGTYRLSELlADPPTGPAVSVavvLILVGALSKSAIVPFH 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 197 SWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIALSTLSQL 276
Cdd:PRK12644 224 FWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 277 GMMMLSLGF-----LMPWLALfhLFSHALFKALLFLCAGSMIHSNgGTQDIRVFGNMWFSMPLTISCFNIANLSLCGMPF 351
Cdd:PRK12644 304 GFLTVLVGIgtrdaALAGLAM--LLAHALFKAALFLVVGIIDHST-GTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPP 380
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1181491977 352 LNGFYSKDLILESYIT----GVIGYVVLVMLVLGTMATLFYSVR 391
Cdd:PRK12644 381 LLGFVAKEAALEAVLHdgalGPAGPVVLAGIVLGSILTVAYSLR 424
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
47-392 |
6.38e-43 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 164.25 E-value: 6.38e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 47 SFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITSFVLVI 126
Cdd:TIGR00940 68 NFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLIS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 127 YY-QNSKSASAGMLTVLMNRVGDCLLIIAISV-FMVQGQWSMCSMNDYCAMVIVS-------WLVFFSSITKSAQYPFSS 197
Cdd:TIGR00940 148 YWhHRAHSRYGAQKSLTITVFGGLAMLGGLILlGKITGSFSIDAVIASADAIRNSplfgtamVLVLLGAFTKSAQFPFHI 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 198 WLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIALSTLSQLG 277
Cdd:TIGR00940 228 WLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLG 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 278 MMMLSLGFLMPWL----------------ALFHLFSHALFKALLFLCAGSMIHSNgGTQDIRVFGNMWFSMPLTISCFNI 341
Cdd:TIGR00940 308 LIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHET-GTRDIRKLGGLFHIMPITFTLAMI 386
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 342 ANLSLCGMPFLNGFYSKDLILESYITG---------VIGYVVLVMLVLGTMATLFYSVRL 392
Cdd:TIGR00940 387 ASAAMAGVPPFNGFLSKEMFFAEAITAhlvnpfdtvTLGYLFPYVATVASVFTFVYSLRF 446
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-382 |
1.35e-42 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 154.39 E-value: 1.35e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 105 PSILGLMIGWDGLGITSFVLVIYY-QNSKSASAGMLTVLMNRVGDCLLIIAISVFMVQGQWS--------MCSMNDYCAM 175
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLsfdelskaLTGGLNSSGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 176 VIVSWLVFFSSITKSAQYPFSSWLPAA-MAAPTPVSALVhSSTLVTAGIFLMFRFSSLLE-MSKTLQFVVIFLSCCTLVL 253
Cdd:pfam00361 82 LLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLpSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 254 AGVGANFEMDLKKVIALSTLSQLGMMMLSLGFLMPW---LALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGNMWF 330
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1181491977 331 SMPLTISCFNIANLSLCGMPFLNGFYSKDLILESyITGVIGYVVLVMLVLGT 382
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAA-AVAASWIFLVLAGVVGS 291
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
43-392 |
5.98e-42 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 161.15 E-value: 5.98e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 43 SVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITSF 122
Cdd:PRK12649 69 SAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 123 VLVIYYQNSKSASAGMLTVLMNRVGDCLLIIA--ISVFMVQGQWSMCSMNDYCAM----------VIVSWLVFFSSITKS 190
Cdd:PRK12649 149 MLIGYWRHRPESVYGATKSLLITAGGGLFMFAgfLLLHVITGTYDIATILQDSELienikghplfLITLILIFIGAAAKS 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 191 AQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIAL 270
Cdd:PRK12649 229 AQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAY 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 271 STLSQLGMMMLSLGFLM---PWL----ALFHLFSHALFKALLFLCAGSMIHSnGGTQDIRVFGNMWFSMPLTISCFNIAN 343
Cdd:PRK12649 309 STISQLAYLMTMYGYTTyhePGLgvaaATFHLLNHATFKACLFLVAGIVAHE-AATRDIRKLGGLRKEMPITFIVASIAA 387
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1181491977 344 LSLCGMPFLNGFYSKDLILES------YITGVIGYVVLVMLVLGTMATLFYSVRL 392
Cdd:PRK12649 388 LAMAGIPPLNGFLSKEMFYETsvemgaLIGGPFTIIIPAVAVLGGVFTFAYSIKL 442
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
36-569 |
6.82e-42 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 158.12 E-value: 6.82e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 36 WEVFSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWD 115
Cdd:MTH00063 27 LNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLSTLIFWE 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 116 GLGITSFVLVIYYQNSKSASAGMLTVLMNRVGDCLLIIAIsvfmvqgqwsMCSMNDYCAMVIVSWLVFFSSITKSAQYPF 195
Cdd:MTH00063 107 YLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLI----------GLSCWGGSGSFLCCLFFFLIVFTKSASFPF 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 196 SSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSkTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIALSTLSQ 275
Cdd:MTH00063 177 ISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFS-WLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNN 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 276 LGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNGGTQDIR-VFGNMWFSMPLTISCFNIAnLSLCGMPFLNG 354
Cdd:MTH00063 256 ISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNcVYSSILYGSWNLFYLFLLV-LGLSGVPFIGV 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 355 FYSKDLILESYITGVIGYVVLVMLVLGTMATLFYSVRLsYLVLWVNNCGHSFHYLNnddKAMNYGMMMLVGGAVvgSLYL 434
Cdd:MTH00063 335 FFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRL-CLILFGVKSSLSSGVRF---LFFNSGLMVFLWLFI--NYYV 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 435 QGVLLELNYEFFLNSSLVmnallaaaVISNILNLVLSVnlaeknlFFWFWELKLYFFSSMWFLENL--SSHPLIYLGLNS 512
Cdd:MTH00063 409 FLLLDEVVYLGVFISLVL--------LLVQLLGLLVGV-------LFYDSNLFSNWSSSLFGCDNLveLFYELFYSILDL 473
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 1181491977 513 SNFYHKSLDQGWIELVGGLGSYSVVskitllhqkfQFQMMTLLIVMSLLFMLSMVWI 569
Cdd:MTH00063 474 VSLFFFRWEIYLIELLCGVGSSSSL----------LYSWFSLNLLLLSLFFLLIYLL 520
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
31-380 |
9.93e-40 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 151.28 E-value: 9.93e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 31 TVIFEWEVFSSGSVNASFP-----------ILVDSVSMMFCVVVWYISSAVMIYVSDYMKE-------DLFLSRFVWLIL 92
Cdd:PRK06525 41 MLSLAYAFYQAGKVAVTLTlvnlgdvalfgLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPgnrehpvHEGTGRYYAFLL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 93 LFVFSMSFLILIPSILGLMIGWDGLGITSFVLVIYYQNSKSASAGMLTVLMNRVGDCLLIIAISVFMVQ-GQWSMCSMN- 170
Cdd:PRK06525 121 LFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQtGTFALSALSg 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 171 -DYCAMVIVSWLVFFSSITKSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFssLLEMS---KTLQFVVIFL 246
Cdd:PRK06525 201 lHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMGpipHVIGYVGAVM 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 247 SCCTLVLAGVGANFEMDLKKVIALSTLSQLGMMM--LSLGFLMPWLAL----FHLFSHALFKALLFLCAGSMIHSNgGTQ 320
Cdd:PRK06525 279 AIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFfgLSLAILGSRLALegsiAYIFNHAFAKSLFFLVAGALSYSC-GTR 357
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1181491977 321 DIRVFGNMWFSMPLTISCFNIANLSLCGMPFLNGFYSKDLILES-YITGVIGYVVLVMLVL 380
Cdd:PRK06525 358 LLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAgFELSVEYWILLPAMVL 418
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
43-392 |
1.06e-37 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 148.53 E-value: 1.06e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 43 SVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYM-KEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITS 121
Cdd:PRK12645 67 SLGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLsKKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 122 FVLVIYYQNSKSASAG-----MLTV---LMNRVGDCLLIIAISVFMVQGQWSMCS--MNDYC---AMVivswLVFFSSIT 188
Cdd:PRK12645 147 FLLISYWYEREASRYGaqksmLITVfggLSMLGGFILLYIMTGSFSIREMIANADeiQNSPLfipAMI----LILLGAFT 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 189 KSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVI 268
Cdd:PRK12645 223 KSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGIL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 269 ALSTLSQLGMMMLSLG---------------FLMPWL-ALFHLFSHALFKALLFLCAGSMIHSNgGTQDIRVFGNMWFSM 332
Cdd:PRK12645 303 AFSTVSQLGLIMSLLGigaaslhyqgddskiYAAAITaAIFHLINHATFKGSLFMIVGIVDHET-GTRDIRKLGGLMTIM 381
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1181491977 333 PLTISCFNIANLSLCGMPFLNGFYSKDLILESYIT---------GVIGYVVLVMLVLGTMATLFYSVRL 392
Cdd:PRK12645 382 PITFTIALIGALSMAGLPPFNGFLSKEMFFESMLNateanlfslDTWGVLFPVIAWVASVFTFVYSIIF 450
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
49-362 |
2.06e-37 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 147.73 E-value: 2.06e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 49 PILVDSVSMMfcvvvwyissaVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITSFVLV-IY 127
Cdd:CHL00025 97 LILITTVGIL-----------VLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFW 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 128 YQNSKSASAGMLTVLMNRVGDCLLIIAI-------------SVFMVQGQW-SMCSMNDYCAmVIVSWLVFFSSITKSAQY 193
Cdd:CHL00025 166 FTRPIAANACQKAFVTNRVGDFGLLLGIlgfywitgsfefrDLFEIFNNLiYNNEVNLLFA-TLCAFLLFLGPVAKSAQF 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 194 PFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRfssLLEMSKTLQFVVIFLS---CCTLVLAGVGANFEMDLKKVIAL 270
Cdd:CHL00025 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR---LLPLFIVIPYIMNLISligIITALLGATLALAQKDIKRGLAY 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 271 STLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNGG--------TQDIRVFGNMWFSMPLTISCFNIA 342
Cdd:CHL00025 322 STMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPivgyspdkSQNMVLMGGLRKYMPITKTTFLLG 401
|
330 340
....*....|....*....|
gi 1181491977 343 NLSLCGMPFLNGFYSKDLIL 362
Cdd:CHL00025 402 TLSLCGIPPLACFWSKDEIL 421
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-398 |
1.08e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 134.24 E-value: 1.08e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 49 PILVDSVSMMFCVVVWYISSAVMIY--VSDYMKEDLFLSrfvwLILLFVFSMSFLILIPSILGLMIGWDGLGITSFVLVI 126
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYaiGYGEHRQTRFYA----LFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVA 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 127 YYQNSKSASAGMLTVLMNRVGDCLLIIAIS-VFMVQGQWSMCSMNDYCA----MVIVSWLVFFSSITKSAQYPFSSWLPA 201
Cdd:PRK08375 148 MGGDRRALAAARKYLIVGLIGSTFLLIGVGlLYGVTGTLNMADLAGALAenptVVTAFGFVLLALALKAAVFPLHTWLPR 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 202 AMAAPTPVSALVHSSTLVTAGIFLMFRFSSL-----LEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIALSTLSQL 276
Cdd:PRK08375 228 AYPAAPPVVTALLSGLVTKVAVYALIRIYFTvfggdFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQM 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 277 GMMMLSLGFLMPWL---ALFHLFSHALFKALLFLCAGSmIHSNGGTQDIRVFGNMWFSMPLTISCFNIANLSLCGMPFLN 353
Cdd:PRK08375 308 GYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGA-IEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTS 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1181491977 354 GFYSKDLILESyITGVIGYVVLVMLVLGTMATLFYSVRLSYLVLW 398
Cdd:PRK08375 387 GFVSKWYLVVG-AVEAGQWLVLAVLLASSLLALLYFLRIWYRAFF 430
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-398 |
4.84e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 132.79 E-value: 4.84e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 52 VDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITSFVLVIYYQNS 131
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDR 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 132 KSA-SAGMLTVLMNRVGDCLLIIAISVF--------------MVQGQWSMCSMNDYCAMVIVSWLVFFSSI----TKSAQ 192
Cdd:PRK12667 160 GDAvEAAIKYALIGAVGTTLYFLALAFLyatfgtlnmadlsaKIRGLSFPLTGGLAGNPPLALGVALALALwaftIKAAI 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 193 YPFSSWLPAAM-AAPTPVSALVhSSTLVTAGIFLMFRF--------SSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMD 263
Cdd:PRK12667 240 FPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 264 LKKVIALSTLSQLGMMMLSLGFLMPWL---ALFHLFSHALFKALLFLCAGSMIHSnGGTQDIRVFGNMWFSMPLTISCFN 340
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIHA-AGTRDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1181491977 341 IANLSLCGMPFLNGFYSKDLILESYITGVIgYVVLVMLVLGTMATLFYSVRLSYLVLW 398
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESGF-YLPALVLLIASAISLVGYFRAWYSLFF 454
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
44-369 |
8.18e-28 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 118.29 E-value: 8.18e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 44 VNASFPILVDSVSMMFCVVVWYISSAVMIYVSDY---MKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGIT 120
Cdd:PRK08667 67 PGLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 121 SFVLVIY-YQNSKSASAGMLTVLMNRVGDCLLII-AISVFMVQGQWSMCSMNDYCAMVIVSWLVFFSSI-TKSAQYPFSS 197
Cdd:PRK08667 147 SFFLVMNdYQEEETQRAGIFYFVMTQLSTVFLMLgIIVLFIQTGSFELSPLGASAGILSLVFLLLFLGFgIKAGIIPFHK 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 198 WLPAAM-AAPTPVSALVhSSTLVTAGIFLMFRF-SSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIALSTLSQ 275
Cdd:PRK08667 227 WLPYAHpASPSNVSALM-SGVMLKVAVYGLVRFlMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIEN 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 276 LGMMMLSLG-------FLMPWLAL-------FHLFSHALFKALLFLCAGSMIHSNgGTQDIRVFGNMWFSMPLTISCFNI 341
Cdd:PRK08667 306 IGIILMGIGlyvifgvYGLDTLALlalggalFHSLNHALFKSLLFLTAGSVVHAT-GTRNIEKMGGLVKLMPYTSALFLV 384
|
330 340
....*....|....*....|....*...
gi 1181491977 342 ANLSLCGMPFLNGFYSKDLILESYITGV 369
Cdd:PRK08667 385 GAVSIAALPPFNGFASELLLYESFFQSF 412
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
45-364 |
3.34e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 112.50 E-value: 3.34e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 45 NASFPI----LVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGIT 120
Cdd:PRK08376 77 SGGFPIriiwEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 121 SFVLVIYYQNSKSAS-AGMLTVLMNRVGDCLLIIAISvfMVQGQW---------SMCSMNDYCAMVIVSWLVFFSSITKS 190
Cdd:PRK08376 157 SYALVAFRNDTWEAIeAGIKYMFVGSLASSMVLLGIA--LLYGQYgtlnmaylaVKMSENPTVVAKIALALFIAGLAMKS 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 191 AQYPFSSWLPAAM-AAPTPVSALVHSSTLvtAGIFLMFR-----FSSLLEMsKTLQFVVIFLSCCTLVLAGVGANFEMDL 264
Cdd:PRK08376 235 GAVPVHMWLPDAYpAAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINL-ATVGWVIIILGCLTMFVGVAMAVVQKDV 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 265 KKVIALSTLSQLGMMMLSLGFLMPWL---------------ALFHLFSHALFKALLFLCAGSMIHSNgGTQDIRVFGNMW 329
Cdd:PRK08376 312 KRLLAYHSVSQIGYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLA 390
|
330 340 350
....*....|....*....|....*....|....*
gi 1181491977 330 FSMPLTISCFNIANLSLCGMPFLNGFYSKDLILES 364
Cdd:PRK08376 391 RTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYES 425
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-380 |
3.84e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 108.75 E-value: 3.84e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 52 VDSVSMMFCVVVWYISSAVMIYVSDYMKEDL--FLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITSFVLVIYYQ 129
Cdd:PRK06589 81 LEPLGLIFLLLIGFLWICALLYTPKYLAINNidSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTR 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 130 NSKSASAGM--LTVLMNRVGDCLLIIAISVFMVQGQWSMCSMNDYC-AMVIVSWLVFFSSITKSAQYPFSSWLPAAMAAP 206
Cdd:PRK06589 161 NNISLSGGYkyLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSkNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAH 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 207 TPVSALVHSSTLVTAGIFLMFR----------FSSLLEMSKTLQFVVIFlsccTLVLAGVGANFEMDLKKVIALSTLSQL 276
Cdd:PRK06589 241 YPVSALLHAVIVVKTGLFCIYKillyifglsyLQRIFAEFNWLIFIPIV----SIFYSSLKALKTDNIKKILAYSTISQL 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 277 GMMMLSLGFLMPW---LALFHLFSHALFKALLFLCAGSmIHSNGGTQDIRVFGNMWFSMPLTISCFNIANLSLCGMPFLN 353
Cdd:PRK06589 317 SLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFS 395
|
330 340
....*....|....*....|....*...
gi 1181491977 354 GFYSKDLILES-YITGVIGYVVLVMLVL 380
Cdd:PRK06589 396 GFISKFLILLAaSEQNQPWLSIIVMLVV 423
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
52-364 |
7.20e-25 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 109.21 E-value: 7.20e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 52 VDSVSMMFCVVVWYISSAVMIYVSDYMKEdlFLSRFVWLIL----LFVFSMSFLILIPSILGLMIGWDGLGITSFVLVIY 127
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFRE--YEGKGPGAMGffynLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 128 YQ-NSKSASAGMLTVLMNRVGDCLLIIAISVFMVQ-GQWSMCSMNDYCAMVIVSWLVFFSSI----TKSAQYPFSSWLPA 201
Cdd:PRK06521 156 NHrEAEIRRAGFLYLLMAHAGALAILLAFGLLAREsGSYDFAAMRAAHLSPFWASLVFLLALfgfgAKAGLVPLHVWLPR 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 202 AM-AAPTPVSALVhSSTLVTAGIFLMFRFS-SLLEMS-KTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIALSTLSQLGM 278
Cdd:PRK06521 236 AHpAAPSHVSALM-SGVMLKVAIYGILRVVfDLLGAPgWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGI 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 279 MMLSLGFLMPWLA--------------LFHLFSHALFKALLFLCAGSMIHSNgGTQDIRVFGNMWFSMPLTISCFNIANL 344
Cdd:PRK06521 315 IFVGLGLAMVFIAygmpllaalaltaaLYHLLNHALFKSLLFLGAGAVLHAT-GTRDMEKLGGLIRRMPWTAWAFLIGCL 393
|
330 340
....*....|....*....|
gi 1181491977 345 SLCGMPFLNGFYSKDLILES 364
Cdd:PRK06521 394 AISALPPLNGFVSEWLLLQS 413
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
181-385 |
7.49e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 101.57 E-value: 7.49e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 181 LVFFSSITKSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRfssLLEMSKTLQFVVIFLSCCTLVLAGVGANF 260
Cdd:PRK07234 189 LIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVR---CALDVPGLDLIVRIFGVGTALLGVLFALL 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 261 EMDLKKVIALSTLSQLGMMMLSlgflMPWLALFHLfSHALFKALLFLCAGSmIHSNGGTQDIRVFGNMWFSMPLTISCFN 340
Cdd:PRK07234 266 EKDLKRMLAFSTISQLGFILAA----PLVGGLYAL-AHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLTMASFS 339
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1181491977 341 IAnlslcGMPFLNGFYSKDLILEsyitGVIGYVVLVMLV--LGTMAT 385
Cdd:PRK07234 340 IA-----GFPLLAGFVSKVLTLK----NLLPWQAIALNLaaVGTAAS 377
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
86-381 |
1.79e-22 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 101.00 E-value: 1.79e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 86 RFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITSFVLVIYYQNSKSASAGMLTVLMNRVGDCLLIIAIS-VFMVQGQW 164
Cdd:PRK08377 109 KYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVAlIYGATGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 165 SMC-------SMNDYCAMVIVSwLVFFSSITKSAQYPFSSWLPAA-MAAPTPVSALVhSSTLVTAGIFLMFRFSSLLEM- 235
Cdd:PRK08377 189 NMAhiaqlagTIDPTVAQVGLA-LLIFGLAVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLMQNa 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 236 ---SKTLQFVVIfLSCCTLVLAGVGANFEMDLKKVIALSTLSQLGMMMLSLGF---LMPWLALFHLFSHALFKALLFLCA 309
Cdd:PRK08377 267 ngwSSVLKLVII-MATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALgtqAGVDAGVFHMINHAIVKALLFLAV 345
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1181491977 310 GSMIHSNGGTQdIRVFGNMWFSMPLTISCFNIANLSLCGMPFLNGFYSKDLILESYITGviGYVVLVMLVLG 381
Cdd:PRK08377 346 GYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSA--GYTWPVALVLG 414
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
32-384 |
8.79e-21 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 96.13 E-value: 8.79e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 32 VIFEWevFSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLM 111
Cdd:PRK07390 69 LSFPW--LQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSY 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 112 IGWDGLGITSFVLV-IYYQNSKSASAGMLTVLMNRVGDCLL---IIAISVFmvQGQWSMCSMNDYCAMVIVSWLVFF--- 184
Cdd:PRK07390 147 VLLEILTLSTYLLVgFWYAQPLVVTAARDAFLTKRVGDLLLlmgVVALSPL--AGTLNFSDLAAWAATANLDPLTATllg 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 185 -----SSITKSAQYPFSSWLPAAMAAPTPVSALvHSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGAN 259
Cdd:PRK07390 225 laliaGPTGKCAQFPLHLWLDEAMEGPNPASIL-RNSVVVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 260 FEMDLKKVIALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNgGTQDIRVFGNMWFSMPLTISCF 339
Cdd:PRK07390 304 AQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTT-ITQDLTELGGLWSRMPATTLAF 382
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1181491977 340 NIANLSLCGMPFLNGFYSKDLILESYITGVIGYVVLVMLVLGTMA 384
Cdd:PRK07390 383 LVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTA 427
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
49-398 |
1.47e-19 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 92.26 E-value: 1.47e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 49 PILVDSVSMMFCVVVWYISSAVMIYVsdymkedLFLSRFVWLILLFVFSMSFL--ILIPSILGLMIGWDGLGITSFVLVI 126
Cdd:PRK12668 62 LGRVDKLSRVFGLIFGIMAFIGVIYA-------LHVKDPGQHVAALLYVGSALgaVFAGDLLTLFVFWELMAFTSTFLVW 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 127 YYQNSKSASAGMLTVLMNRVGDCLLIIAISVFMVQ-GQWSMCSMNDYcaMVIVSWLVFFSSITKSAQYPFSSWLPAAMAA 205
Cdd:PRK12668 135 ARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAEtGSFAFGAIAGL--GGTAAWLILIGFGVNAAFPPLHAWLPDAYPE 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 206 PTpvsalvhsstlVTAGIFL-MFrfsslleMSKTLQFVVIFLSCCTLVLAGVG----------ANFEMDLKKVIALSTLS 274
Cdd:PRK12668 213 AT-----------VTGSVFLsAF-------TTKTAVYALARAFPGTELLIYIGaamavygvffALLENDLRRLLSYHIVS 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 275 QLGMMMLSLGFLMPwLAL----FHLFSHALFKALLFLCAGSMIHSNGgTQDIRVFGNMWFSMPLTISCFNIANLSLCGMP 350
Cdd:PRK12668 275 QVGYMVAGIGIGTA-LAIngavAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSMPLTALFCLVGALSISAFP 352
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1181491977 351 FLNGFYSKDLILESYITGVIGYVVLvMLVLGTMATLFYS-VRLSYLVLW 398
Cdd:PRK12668 353 LFSGFVSKSMIISAAGEDHYVWVWL-LLLLASAGTFLHFgIKLPYFAFF 400
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
89-396 |
6.05e-19 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 90.44 E-value: 6.05e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 89 WLILLFVFSMSFLILIPS-ILGLMIGWDGLGITSFVLVIYyQNSKSASAGMLTVLMNRVGDCLLIIAI----------SV 157
Cdd:PRK08668 101 NMFALMSLAGVLGVFLANdLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAIGAYAMLYAIfliyaktgtfDF 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 158 FMVQGQWSMCSMNDYcAMVIVSWLVFFSsITKSAQYPFSSWLPAAMA-APTPVSAlVHSSTLVTAGIFLMFRFSSLLEMS 236
Cdd:PRK08668 180 ADISQGLINDTSTGF-ALIVFLFLLAFG-VAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLYVLPGT 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 237 K------------TLQFVVIFLSCCTLVLAGVGANFEMDLKKVIALSTLSQLGMMMLSLGFLMPWL---ALFHLFSHALF 301
Cdd:PRK08668 257 KlfsefgtyrgvpLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfagGLFHVFNHALF 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 302 KALLFLCAGSMIHSNgGTQDIRVFGNMWFSMPLTISCFNIANLSLCGMPFLNGFYSKDLILESYITGVIgYVVLVMLVLG 381
Cdd:PRK08668 337 KGLFFLIFAAVIYRT-GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGM-PITAFMAFFG 414
|
330
....*....|....*
gi 1181491977 382 TMATLFYSVRLSYLV 396
Cdd:PRK08668 415 SIGSFLYVFRPLAGV 429
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
180-362 |
7.12e-19 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 89.76 E-value: 7.12e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 180 WLVFFSSITKSAQYPFSSWLP-AAMAAPTPVSALvHSSTLVTAGIFLMFRFSSLL--EMSKTLQFVVIFLSCCTLVLAGV 256
Cdd:COG1008 213 LAFFIAFAVKVPMFPFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFALPLfpEASAYFAPLLAALGVIGIIYGAL 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 257 GANFEMDLKKVIALSTLSQLGMMMLSLGFLMPWL---ALFHLFSHALFKALLFLCAGsMIHSNGGTQDIRVFGNMWFSMP 333
Cdd:COG1008 292 VALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMP 370
|
170 180
....*....|....*....|....*....
gi 1181491977 334 LTISCFNIANLSLCGMPFLNGFYSKDLIL 362
Cdd:COG1008 371 VLAALFLLAALASLGLPGTSGFVGEFLVL 399
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
38-311 |
2.85e-18 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 87.83 E-value: 2.85e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 38 VFSSGSVNASFPIL-VDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDG 116
Cdd:PRK08168 52 LFATGAAWPAAAWLeVSGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAA 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 117 LGITSFVLVIYYQNSKSAS-AGMLTVLMNRVGDCLLIIAISVFMVQ-GQWSMCSMNDYCAMV-------IVSWLVFFSSI 187
Cdd:PRK08168 132 ISLALHRLLCFYPDRPFARlAAHKKFIADRLAELLLLAAAALAYLEvGSLSLSALWAHLAAQgaspslqAAALLLVLAVI 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 188 TKSAQYPFSSWLPAAMAAPTPVSALVHSStLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKV 267
Cdd:PRK08168 212 LKTAQLPVHGWLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVR 290
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1181491977 268 IALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGS 311
Cdd:PRK08168 291 LAWSTVAQMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASE 334
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
51-386 |
6.03e-17 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 83.85 E-value: 6.03e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 51 LVDSVSMMFCVVVWYISSAVMIYV---SDYMKEDLFLSRFVWLILLFVfSMSFLIliPSILGLMIGWDGLGITSFVLVIY 127
Cdd:PRK12663 74 TGDSLSALMVTTASFVATAIMAYGfgdIEHSGRRYGFPPFILLLMAGV-IGSFLT--GDLFNLYVWFEVMLIASFVLITL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 128 YQNSKSASAGMLTVLMNRVGDCLLIIAIS-VFMVQGQWSMC-------SMNDYCAMVIVSWLVFFSSITKSAQYPFSsWL 199
Cdd:PRK12663 151 GQEREQLRGAIKYVVLNLIGSWLFLLGIGlLYGTFGTLNMAhiamrlnDMGDTATLTTIALLFLLAFGMKAALFPFM-WL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 200 PAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLL--EMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIALSTLSQLG 277
Cdd:PRK12663 230 PAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 278 MMMLSLGFLMPWL---ALFHLFSHALFKALLFLCAGSMIHSnGGTQDIRVFGNMWFSMPLTISCFNIANLSLCGMPFLNG 354
Cdd:PRK12663 310 FILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVRL-TGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSG 388
|
330 340 350
....*....|....*....|....*....|..
gi 1181491977 355 FYSKDLILESYITGVIGYVVLVMLVLGTMATL 386
Cdd:PRK12663 389 FWGKVLLVQGALDNGAYILLALMLITSLITMY 420
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
388-564 |
2.15e-15 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 74.51 E-value: 2.15e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 388 YSVRLSYLVLWVNNCGHSFHYLNNDDKAMNYGMMMLVGGAVVGSLYLQGVLLELNYEFFLNSSLVMNALLAAavisnILN 467
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVT-----ILG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 468 LVLSVNLAEKNLFFWFWELKL---YFFSSMWFLENLSSHPLIYLGLNSSNFYHKSLDQGWIELVGGLGSYSVVSKITLLH 544
Cdd:pfam06455 76 LLLGLELSNLSNKQLKKSLNFnlhSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKII 155
|
170 180
....*....|....*....|
gi 1181491977 545 QKFQFQMMTLLIVMSLLFML 564
Cdd:pfam06455 156 QNSQKGLIKIYLLSFLLWLL 175
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
150-311 |
5.50e-15 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 77.77 E-value: 5.50e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 150 LLIIAISVFMVQGQWSMCSMNDYCAMVIVSW--------LVFFSSITKSAQYPFSSWLPAAMAAPTPVSALVHSStLVTA 221
Cdd:PRK08601 170 LALAIVWLFIATGEWQLTSVLSNENLAQLGTwektginlLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNA 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 222 GIFLMFRFSSLL--EMSKTLQFVVIFLScctlVLAGVGANF-EMDLKKVIALSTLSQLGMMMLSLGFLMPWLALFHLFSH 298
Cdd:PRK08601 249 GGIMLTRFSPLFhdDIAQILLLIFASIS----VLIGTGISLvQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILH 324
|
170
....*....|...
gi 1181491977 299 ALFKALLFLCAGS 311
Cdd:PRK08601 325 GLFKATLFLQSGS 337
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-388 |
6.43e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 74.39 E-value: 6.43e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 119 ITSFVLVIYYQNSKSASAGMLTVLMNRVGDCLLIIAIS-VFMVQGQWSMCSM-------NDYCAMVIVSWLVFFSSITKS 190
Cdd:PRK12662 144 ISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGfLYAITGTLNMGDMfliiqdlPTNRAIQIGVLFIMVGLFIKA 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 191 AQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRF------SSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDL 264
Cdd:PRK12662 224 ALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDI 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 265 KKVIALSTLSQLGMMMLSLGFLMPW---LALFHLFSHALFKALLFLCAGSmIHSNGGTQDIRVFGNMWFSMPLTISCFNI 341
Cdd:PRK12662 304 KRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGS-ISYHFGTTKLEDCLNLWKSMPKITLAFVL 382
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1181491977 342 ANLSLCGMPFLNGFYSKDLILESYITGViGYVVLVMLVLGTMATLFY 388
Cdd:PRK12662 383 LSLSLIGMPPTSGFVAKWYILDAFIKSN-AWIGLVVLLVGSGLSVIY 428
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
174-390 |
2.62e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 72.29 E-value: 2.62e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 174 AMVIVSWLVFFSSITKSAQYPFSSWLPAA-MAAPTPVSALVhSSTLVTAGIFLMFR-----FSSLLEMSKTLqfvVIFLS 247
Cdd:PRK07691 207 LITVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARtftlfFSHDTSFTHYL---ILILA 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 248 CCTLVLAGVGANFEMDLKKVIALSTLSQLGMMMLSLGFLMPWL---ALFHLFSHALFKALLFLCAGSMIHSNGgTQDIRV 324
Cdd:PRK07691 283 LLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIKITG-TTDLKK 361
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1181491977 325 FGNMWFSMPLTISCFNIANLSLCGMPFLNGFYSKDLILESyiTGVIGYVVLVMLVLGTMATLFYSV 390
Cdd:PRK07691 362 MGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEG--TFEAGFYVSGIIVLLSSLLVLYSV 425
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
180-362 |
1.29e-12 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 70.23 E-value: 1.29e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 180 WLVFFSSIT-KSAQYPFSSWLPAAMA-APTPVSALvHSSTLVTAGIFLMFRFSSLL--EMSKTLQFVVIFLSCCTLVLAG 255
Cdd:PRK05846 214 FLAFFIAFAvKMPMFPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFSLPLfpDASHEFAPIIITLGVIAIIYGA 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 256 VGANFEMDLKKVIALSTLSQLGMMMLSLgFLMPWL----ALFHLFSHALFKALLFLCAGsMIHSNGGTQDIRVFGNMWFS 331
Cdd:PRK05846 293 LVALAQTDIKKLIAYSSISHMGFVTLGI-FAGNQLgiqgAIFQMISHGLSSAALFLLVG-VLYDRLHTRDIADYGGLAKV 370
|
170 180 190
....*....|....*....|....*....|.
gi 1181491977 332 MPLTISCFNIANLSLCGMPFLNGFYSKDLIL 362
Cdd:PRK05846 371 MPVLAAFFLFFAMASLGLPGTSGFVGEFLIL 401
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
50-392 |
3.34e-12 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 68.60 E-value: 3.34e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 50 ILVDSVSMMFCVVVWYISSAVMIYVSDYMK-EDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITSFVLV-IY 127
Cdd:COG1007 66 FVVDGFALFFKLLILLAALLVLLLSRDYLErRGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaFR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 128 YQNSKSASAGMLTVLMNRVGDCLLIIAIS-VFMVQG-------QWSMCSMNDYCAMVIVSWLVFFSSIT-KSAQYPFSSW 198
Cdd:COG1007 146 RDDRRSSEAALKYFLLGALSSGFLLYGISlLYGATGslnlagiAAALAAGGANSPLLLLGLVLVLAGLAfKLSAVPFHMW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 199 LP-AAMAAPTPVSALVhsSTLV-TAGIFLMFRF--SSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIALSTLS 274
Cdd:COG1007 226 TPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLlvEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIA 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 275 QLGMMMLSLGFLMPW---LALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGNMWFSMPLTISCFNIANLSLCGMPF 351
Cdd:COG1007 304 HAGYLLLGLAAGTPLgvsAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPP 383
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1181491977 352 LNGFYSKDLILESYITGviGYVVLVML-VLGTMATLFYSVRL 392
Cdd:COG1007 384 TAGFFGKFYVFSAAVEA--GLYWLAVIaVLNSVISAYYYLRV 423
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
174-380 |
5.78e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 68.24 E-value: 5.78e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 174 AMVIVSWLVFFSSI-TKSAQYPFSSWLPAAMA-APTPVSALVhSSTLVTAGIFLMFRFSSLLEMSK---TLQFVVIFLSC 248
Cdd:PRK08676 203 SVLGASFLFIFIGFlAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGaaeQFSNVLIGLGI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 249 CTLVLAGVGANFEMDLKKVIALSTLSQLGMMMLSLGFLMP---WLALFHLFSHALFKALLFLCAGsMIHSNGGTQDIRVF 325
Cdd:PRK08676 282 FSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPlalFWMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRI 360
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1181491977 326 GNMWFSMPLTISCFNIANLSLCGMPFLNGFYSKDLILESyITGVIGYVVLVMLVL 380
Cdd:PRK08676 361 FDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQ-LGGISVWLVLAVLLL 414
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
194-365 |
3.19e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 62.92 E-value: 3.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 194 PFSSWLPAAMA-APTPVSALVhSSTLVTAGIFLMFRFSsLLEMSKTLQF--VVIFLSCCTLVLAGVGANFEMDLKKVIAL 270
Cdd:PRK08042 198 PLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLS-LLGGNAPLWWgvALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 271 STLSQLGMMMLSLGFLMPWLA--------------LFHLFSHALFKALLFLCAGSMIHSNgGTQDIRVFGNMWFSMPLTI 336
Cdd:PRK08042 276 HTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFRT-GHRDIEKLGGIGKKMPVIS 354
|
170 180
....*....|....*....|....*....
gi 1181491977 337 SCFNIANLSLCGMPFLNGFYSKDLILESY 365
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSF 383
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
188-390 |
4.34e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 62.25 E-value: 4.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 188 TKSAQYPFSSWLPAAMA-APTPVSALVhSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANF---EMD 263
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIFGLLSVLVAAFFllrQRD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 264 LKKVIALSTLSQLGMMMLSLGFLMP---WLALFHLFSHALFKALLFLCAGSMIHSNGgTQDIRVFGNMWFSMPLTISCFN 340
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGGPlgiFAALLHMLNHSLTKSAIFFASGNVLQKYG-TRDINVIRGLLKVSPLTGWGLM 383
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1181491977 341 IANLSLCGMPFLNGFYSKDLILESYITG--VIGYVVLVMLVLGTMATLFYSV 390
Cdd:PRK06458 384 LGALAIAGMPPFGVFISEFLILTAGLARgpLLIAILLLLLLTLAFAALVRRV 435
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
51-392 |
1.04e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 57.73 E-value: 1.04e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 51 LVDSVSMMFCVVVWYISSAVMIyvsDYMKEDLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITSFVLVIYYQN 130
Cdd:PRK06277 69 LFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGT 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 131 SKSASAGMLTVLMNRVGDCLLIIAISVFM-VQGQWSMCSMNDYCAMVIVSWLVFFSSITKSAQYPFSSWLPA-------- 201
Cdd:PRK06277 146 EEAYKAALKYMILGNVAGSILLLGIGFLLaSTGTLNITDIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPfhtiksdi 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 202 -AMAAPTPVSALVHSSTLVTAGIFL-MFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIALSTLSQLGMM 279
Cdd:PRK06277 226 yAKAKPFGSALLQTFSKFVLVALMLvIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 280 MLSLGFLMPW---LALFHLFSHALFKALLFLCAGSmIHSNGGTQDIRVFGNMWFSMPLTISCFNIANLSLCGMPFLNGFY 356
Cdd:PRK06277 306 AAGLALGTPLgivAGIFHAINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQ 384
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1181491977 357 SKDLILESYITGVIGYVVLVMLVLG-----TMATLFYSVRL 392
Cdd:PRK06277 385 SKLMLAQAAMQANMPELAIIMIIVSigtfvSMMKAFYLIYL 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
50-392 |
6.44e-08 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 55.21 E-value: 6.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 50 ILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRFVwLILLFVFSMSFLILIPSILGLMIGWDGLGITSFVLVIY-Y 128
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYLEDRGRGEFYL-LVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALrR 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 129 QNSKSASAGMLTVLMNRVGDCLLIIAISVFMVQ-GQWSMCSMNDYCA-MVIVSWLVFFSSIT-------KSAQYPFSSWL 199
Cdd:PRK05777 148 DRRRSLEAAIKYFVLGALASGFLLYGMSLLYGAtGSLSFAGIAKALAdGSGNSLLLLFGLVFllvglafKLSAVPFHMWT 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 200 PAAM-AAPTPVSALVHSSTLVtAGIFLMFRFS--SLLEMSKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIALSTLSQL 276
Cdd:PRK05777 228 PDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLvvAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 277 GMMMLslGFLMPWL-----ALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGNMWFSMPLTISCFNIANLSLCGMPF 351
Cdd:PRK05777 307 GYLLV--GLAAGTAegysaVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPP 384
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1181491977 352 LNGFYSKDLILESYITGviGYVVLVML-VLGTMATLFYSVRL 392
Cdd:PRK05777 385 TAGFWGKFYVFEAAVEA--GLWWLAVIgVLNSAIGAFYYLRV 424
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
44-395 |
6.78e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 52.04 E-value: 6.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 44 VNASFPILVDSVSMMFcvVVWYISSAVMIYVSDYMKedlFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITSFV 123
Cdd:PRK12664 27 YDWSEPVYNLDLVLFI--VLSFSLALIFLYILPIKN---MRFSEMLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALM 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 124 LVIYYQNSKSASAGMLTVLMNRVGDCLLIIAISVFMVQGQWsmcsmNDYCamvivSWLVFFSSITKSAQYPFSSWLPAAM 203
Cdd:PRK12664 102 IIAAGCPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQY-----TGYC-----KLLFMLGLLINCACFPASSWVVDAY 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 204 AAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMsktlqfvVIFLSCCTLVLAGVGANFEMDLKKVIALSTLSQLGMMMLSL 283
Cdd:PRK12664 172 PAASNFGIIVLSLFTTKVAALVLLLFFSGEEI-------LLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAI 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 284 GFLMPW-----LALFHLFSHALFKALLFLCAGSMIHSNGGTQDIRVFGnmWFSMPLTISCFNIANLSLCGMPFLNGFYSK 358
Cdd:PRK12664 245 GFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINRTRKFNLNRVGG--LFKMSLEAMCCIIAILNMGAFPGTAGFVSK 322
|
330 340 350
....*....|....*....|....*....|....*..
gi 1181491977 359 DLILESYITGVIGYVVLVMLVLGTMATLFYSVRLSYL 395
Cdd:PRK12664 323 SLITHSIDTAGLTLVLYKKLFLICSLLLFASVGLKFF 359
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
39-87 |
3.16e-06 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 44.34 E-value: 3.16e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 1181491977 39 FSSGSVNASFPILVDSVSMMFCVVVWYISSAVMIYVSDYMKEDLFLSRF 87
Cdd:pfam00662 2 LSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
89-386 |
4.74e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 49.40 E-value: 4.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 89 WLILLFVFS---MSFLILIPSILGLMIGWDGLGITSFVLVIYYQNSKSASagmLTVLMNRVGDCLLIIA--ISVFMVQGQ 163
Cdd:PRK06459 73 WLSSLYILTilgMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKRPA---FVFMAFGELSTVLILAgfAWAFIISGT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 164 WSMCSMNDYCAMVIVSwlvfFSSITKSAQYPF--SSWLPAAMA-APTPVSAlVHSSTLVTAGIFLMFRFSSLLEMSKTLQ 240
Cdd:PRK06459 150 TNFSYLPSPVPLILAS----FGFIIKMGMMPFlvSEWLPIAHGnAPSNFSA-ILSATMTLMGVYGILKMTILTQTIPIGY 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 241 F--VVIFLSCCTLVLAGVGANFEMDLKKVIALSTLSQLGMMMLSLGFLMP-------------WLALFHLFSHALFKALL 305
Cdd:PRK06459 225 FglTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLYMVtkqlitsiehfslITVILYSFAHSVAKTGL 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 306 FLCAGSMIHSNGGTqdIRVFGNMWFSMPLTiscfnIANLSLCGMPFLNGFYSKDLILESYITGVI---GYVVLVMLVLGT 382
Cdd:PRK06459 305 FLSSGLQEKQSITY--SKKIRNRWIELGLT-----LLASSLSGLLPNIGGVASWLLLESLFMFAYvlhNVISILFIVTGA 377
|
....
gi 1181491977 383 MATL 386
Cdd:PRK06459 378 IIAM 381
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
194-396 |
6.68e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 48.38 E-value: 6.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 194 PFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMSktlqfVVIFLSCCTLVLAGVGANFEMDLKKVIALSTL 273
Cdd:MTH00070 110 PFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN-----LLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSI 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 274 SQLGMMMLSLGFlMPWLALFHLFSHALFKALLFLcagSMIHSNggTQDIRVFGNMWFSMPLTISCFNIANLSLCGMPFLN 353
Cdd:MTH00070 185 AHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL---MLMNLN--STNINKLSSSWSKNPTLTSMMMLTLLSLGGLPPTT 258
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1181491977 354 GFYSKDLILESyITGVIGYVVLVMLVLGTMATLFYSVRLSYLV 396
Cdd:MTH00070 259 GFIPKWLILQE-LTKQNLTTLATLMALSALLSLFFYLRLSYAM 300
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
162-395 |
8.89e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 44.81 E-value: 8.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 162 GQWSMCSMNDYCAMVIVSWLVFfssiTKSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLEMskTLQF 241
Cdd:MTH00112 82 GQWDITQLTNPTSCTLLTLALA----MKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNP--TLLL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 242 VVIFLScctLVLAGVGANFEMDLKKVIALSTLSQLGMMMLSLGfLMPWLALFHLFSHALFKALLFLcagSMIHSNggTQD 321
Cdd:MTH00112 156 TLAILS---TLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIIT-YSPKLTLLTFYIYILMTTPMFL---TLNTTS--TKT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 322 IRVFGNMWFSMPLTISCFNIANLSLCGMPFLNGFYSKDLILESyitgvigyvvLVMLVLGTMAT---------LFYSVRL 392
Cdd:MTH00112 227 LKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQE----------LTKQNMTPTATimamlsllsLFFYLRL 296
|
...
gi 1181491977 393 SYL 395
Cdd:MTH00112 297 TYI 299
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
193-361 |
2.56e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 43.92 E-value: 2.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 193 YPFSSWLP-AAMAAPTPVSALVhSSTLVTAGIFLMFRFSSLLeMSKTLQFVVIFLSCCTLVLAGVGAN---FEMDLKKVI 268
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGL-FPEAWVYLAPWLATWAVVSVLYGAScaiAQKDMKKMV 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 269 ALSTLSQLGMMMLSLGFLMPW---LALFHLFSHALFKALLFLCAGsMIHSNGGTQDIRVFG---NMWFSMPLTISCFNIA 342
Cdd:PRK06473 300 AYSSIGHMGYILLAAAAATPLsilAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRgllNPERGLPITGSLMILG 378
|
170
....*....|....*....
gi 1181491977 343 NLSLCGMPFLNGFYSKDLI 361
Cdd:PRK06473 379 VMASAGIPGMVGFIAEFLV 397
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
179-434 |
3.00e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 43.12 E-value: 3.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 179 SWLVFFSSITKSAQYPFSSWLPAAMAAPTPVSALVHSSTLVTAGIFLMFRFSSLLemsktlqFVVIFLSCCTLVLAGVGA 258
Cdd:MTH00197 82 VVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSF-------MGLLICSVLSSLIGGIGG 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 259 NFEMDLKKVIALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSnggtqdIRVFGNMWFSMPLTISC 338
Cdd:MTH00197 155 MNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSS------LNQQYSNPESMSSNLVF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 339 FNIANLSLCGMPFLNGFYSKDLILESYITGVIgYVVLVMLVLGTMATLFYSVRLSYLVLWVNNCGHSFHYLNNddkaMNY 418
Cdd:MTH00197 229 LGLSFLSLGGLPPLSGFFLKWLILTSLLSSNI-SLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMKIN----LLY 303
|
250
....*....|....*.
gi 1181491977 419 GMMMLVGGAVVGSLYL 434
Cdd:MTH00197 304 SGLFILLMMMLPLLMI 319
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
221-401 |
3.19e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 43.00 E-value: 3.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 221 AGIFLMFRFSSLLemsktLQFVVIFLSCCTLVLAGVGANFEMDLKKVIALSTLSQLGMMMLSLGFLmPWLALFHLFSHAL 300
Cdd:MTH00041 137 APLILLISISNLL-----NSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYS-PNASIIMFLIYII 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 301 FKALLFLcagsmIHSNGGTQDIRVFGNMWFSMPLTISCFNIANLSLCGMPFLNGFYSKDLILESYITGvIGYVVLVMLVL 380
Cdd:MTH00041 211 INTSIFL-----IGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQN-NSILISIILII 284
|
170 180
....*....|....*....|....
gi 1181491977 381 GTMATLFYSVRLS---YLVLWVNN 401
Cdd:MTH00041 285 GSLLSLFFYLRISfntSLTLFPQH 308
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
189-358 |
3.47e-04 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 43.45 E-value: 3.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 189 KSAQYPFSSWLPAAM-AAPTPVSALVhSSTLVTAGIFLMFRFSSLLEMSKTLQFVVIF--LSCCTLVLAGVGANFEMDLK 265
Cdd:CHL00049 227 KLSLAPFHQWTPDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPFYFSSNEWHLLLeiLAILSMILGNLIAITQTSMK 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 266 KVIALSTLSQLGMMMLSLGFLMPWLALFHLFSHALFKALLFLCAGSMIHSNG---GTQDIRVFGNMWFSMPLTISCFNIA 342
Cdd:CHL00049 306 RMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGlrtGTDNIRDYAGLYTKDPFLALSLALC 385
|
170
....*....|....*.
gi 1181491977 343 NLSLCGMPFLNGFYSK 358
Cdd:CHL00049 386 LLSLGGIPPLAGFFGK 401
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
52-394 |
1.27e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.45 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 52 VDSVSMMFCVVVWYISSAVMIYVSDYMKedLFLSRFVWLILLFVFSMSFLILIPSILGLMIGWDGLGITSF-VLVIYYQN 130
Cdd:MTH00226 100 VDGISIYFIILTGFIVPCSILISWHSVK--YLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYlILGIWGSR 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 131 SKSASAGMLTVLMNRVGDCLLIIAI-SVFMVQGQ---WSMCSMNDYCAMVIVSWL---VFFSSITKSAQYPFSSWLPAAM 203
Cdd:MTH00226 178 EEKMQAAYYFFFYTLIGSVLMLLCLfSLYNIHGTtdyLTLASCSHVVSEQTQKWIflgIFLAMAVKIPIFPFHIWLPKAH 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 204 AAPTPVSALVHSSTLVTAGIFLMFRFS-SLLEM-SKTLQFVVIFLSCCTLVLAGVGANFEMDLKKVIALSTLSQLGMMML 281
Cdd:MTH00226 258 VEAPVAGSVLLAGILLKLGGYGLVRLSwPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSI 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 282 SL---GFLMPWLALFHLFSHALFKALLFLCAgSMIHSNGGTQDIRVFGNMWFSMPLTISCFNIANLSLCGMPFLNGFYSK 358
Cdd:MTH00226 338 TLvthDIIGLTGSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGE 416
|
330 340 350
....*....|....*....|....*....|....*...
gi 1181491977 359 DL-ILESY-ITGVIGYVVLVMLVLGTMATLFYSVRLSY 394
Cdd:MTH00226 417 YLsILSSFnWNPIIGVFVCSGVILSAVYSFYFANRVTF 454
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
182-350 |
8.31e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 38.89 E-value: 8.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 182 VFFSSITKSAQYPFSSWLPAA-MAAPTPVSALVHSSTLVTAGI-FLMFRFSSLLEMSKTLQFVVIFLSCCTLVLAGVGAN 259
Cdd:MTH00204 215 FFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYgFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTC 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1181491977 260 FEMDLKKVIALSTLSQLGMMMLSL-GFLMPWL--ALFHLFSHALFKALLFLcAGSMIHSNGGTQDIRVFGNMWFSMPLTI 336
Cdd:MTH00204 295 RQVDFKRLIAYSSVAHMGLVPLGLfTHTIEGLvaAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFV 373
|
170
....*....|....
gi 1181491977 337 SCFNIANLSLCGMP 350
Cdd:MTH00204 374 IIMLVLSLANMGFP 387
|
|
| |
