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Conserved domains on  [gi|1199893917|ref|YP_009378338|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Petrasma pervernicosa]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009588)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 1.25e-40

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 130.75  E-value: 1.25e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917   1 MSLLFSSMLALMIPAIVLILAWVLSYRTTSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFPIISTL 80
Cdd:MTH00148    2 LSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1199893917  81 SMSASASALFGGILFLLILIIGLLHEWREGSLDWAK 116
Cdd:MTH00148   82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 1.25e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 130.75  E-value: 1.25e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917   1 MSLLFSSMLALMIPAIVLILAWVLSYRTTSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFPIISTL 80
Cdd:MTH00148    2 LSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1199893917  81 SMSASASALFGGILFLLILIIGLLHEWREGSLDWAK 116
Cdd:MTH00148   82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-75 1.53e-20

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 79.00  E-value: 1.53e-20
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1199893917  18 LILAWVLSYRTTsDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFP 75
Cdd:pfam00507   1 LLLSRLLGPKRP-NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFP 57
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 9-75 2.26e-18

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 74.00  E-value: 2.26e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1199893917   9 LALMIPAIVLILAWVLSYRTtSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFP 75
Cdd:COG0838    14 VALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFP 79
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 1.25e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 130.75  E-value: 1.25e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917   1 MSLLFSSMLALMIPAIVLILAWVLSYRTTSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFPIISTL 80
Cdd:MTH00148    2 LSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1199893917  81 SMSASASALFGGILFLLILIIGLLHEWREGSLDWAK 116
Cdd:MTH00148   82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 9.57e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 120.87  E-value: 9.57e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917   1 MSLLFSSMLALMIPAIVLILAWVLSYRTTSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFPIISTL 80
Cdd:MTH00202    2 LLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVL 81

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1199893917  81 SMSASASALFGGILFLLILIIGLLHEWREGSLDWAK 116
Cdd:MTH00202   82 KSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-114 5.67e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 113.72  E-value: 5.67e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917   3 LLFSSMLALMIPAIVLILAWVLSYRTTSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFPIISTLSM 82
Cdd:MTH00161    2 ILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKT 81

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1199893917  83 SASASALFGGILFLLILIIGLLHEWREGSLDW 114
Cdd:MTH00161   82 SNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 6-115 1.09e-33

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 113.03  E-value: 1.09e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917   6 SSMLALMIPAIVLILAWVLSYRTTSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFPIISTLSMSAS 85
Cdd:MTH00012    7 PMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTS 86

                          90       100       110
                  ....*....|....*....|....*....|
gi 1199893917  86 ASALFGGILFLLILIIGLLHEWREGSLDWA 115
Cdd:MTH00012   87 KTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 1.24e-26

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 95.05  E-value: 1.24e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917   1 MSLLFSSMLALMIPAIVLILAWVLSYRTtSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFPIISTL 80
Cdd:MTH00042    2 TNLIFFLLIILILTSLLLLAGHFLPSRS-PDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1199893917  81 SMSASASALFGGILFLLILIIGLLHEWREGSLDWA 115
Cdd:MTH00042   81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWA 115
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-115 3.79e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 93.79  E-value: 3.79e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917   1 MSLLFSSMLALMIPAIVLILAWVLSyRTTSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFPIISTL 80
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLT-QTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1199893917  81 SMSASASALFGGILFLLILIIGLLHEWREGSLDWA 115
Cdd:MTH00113   80 NLTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 2.93e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 86.51  E-value: 2.93e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917   1 MSLLFSSMLALMIPAIVLILAWVLSYRTTSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFPIISTL 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1199893917  81 SMSASASALFGGILFLLILIIGLLHEWREGSLDWA 115
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWA 115
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 8-115 6.72e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 85.43  E-value: 6.72e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917   8 MLALMIPAIVLILAWVLSY---RTTSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFPIISTLSMSA 84
Cdd:MTH00069    3 MLMLLISTILSLILITISFwlpLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNT 82

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1199893917  85 SASALFGGILFLLILIIGLLHEWREGSLDWA 115
Cdd:MTH00069   83 PTNTLFWSTLILILLTLGLIYEWIQGGLEWA 113
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-116 1.29e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 82.30  E-value: 1.29e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917   1 MSLLFSSMLALMIpaiVLILAWVLSYRTTSdrEKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFPIISTL 80
Cdd:MTH00106    5 LTLLTNTLLASLL---VLIAFWLPQLNIYS--EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1199893917  81 SMSASASALFGGILFLLILIIGLLHEWREGSLDWAK 116
Cdd:MTH00106   80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-75 1.53e-20

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 79.00  E-value: 1.53e-20
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1199893917  18 LILAWVLSYRTTsDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFP 75
Cdd:pfam00507   1 LLLSRLLGPKRP-NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFP 57
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 3.70e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 78.40  E-value: 3.70e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917   1 MSLLFSSMLALMIPAIVLILAWVLSYRTTSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFPIIstL 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLP--W 78

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1199893917  81 SMSASASALFGGILFLLILIIGLLHEWREGSLDW 114
Cdd:MTH00203   79 SNQLSSLSLLLAFLFLILLTLGLIYEWLQGGLEW 112
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 9-115 8.45e-19

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 75.29  E-value: 8.45e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917   9 LALMIPAIVLILAWVLSYRTtSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFPiISTLSMSASASA 88
Cdd:PRK06602   17 VAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFP-WAVSFREIGWLG 94

                          90       100
                  ....*....|....*....|....*..
gi 1199893917  89 LFGGILFLLILIIGLLHEWREGSLDWA 115
Cdd:PRK06602   95 FVEAMIFILVLLVGLVYLWRKGALDWE 121
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 9-75 2.26e-18

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 74.00  E-value: 2.26e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1199893917   9 LALMIPAIVLILAWVLSYRTtSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFP 75
Cdd:COG0838    14 VALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFP 79
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-114 1.43e-15

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 67.01  E-value: 1.43e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917   1 MSLLFSSMLALMIPAIVLILAWVLSYRTtSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFPiISTL 80
Cdd:MTH00018    1 YGLFILLIFSVVLSALFSGASYFLGVKQ-PDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFP-WCVL 78

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1199893917  81 SMSASASALFGGILFLLILIIGLLHEWREGSLDW 114
Cdd:MTH00018   79 YNQIAPFGFWTMVGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 31-75 5.47e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 65.50  E-value: 5.47e-15
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1199893917  31 DREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFP 75
Cdd:MTH00055   35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFP 79
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 2-114 2.98e-13

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 61.10  E-value: 2.98e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917   2 SLLFSSMLALMIPAIVLILAWVLSYR----TTSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFPiI 77
Cdd:MTH00030    7 TIFFSTLLGVGIILLLVSISFTLGNSriglTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFP-W 85

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1199893917  78 STLSMSASASALFGGILFLLILIIGLLHEWREGSLDW 114
Cdd:MTH00030   86 SIVFNQLNLFSFWIVYTFLIVLAIGLAYEWIKGGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 11-114 2.85e-08

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 48.06  E-value: 2.85e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917  11 LMIPAIVLILAWVLS---YRTTSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFPIIST---LSMSA 84
Cdd:CHL00022   14 LIISSLIPILAFLISgllAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSfdvLGVSA 93

                          90       100       110
                  ....*....|....*....|....*....|
gi 1199893917  85 SASAlfggILFLLILIIGLLHEWREGSLDW 114
Cdd:CHL00022   94 FIEA----LIFVLILIVGLVYAWRKGALEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
9-75 1.49e-07

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 46.27  E-value: 1.49e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1199893917   9 LALMIPAIVLILAWVLSYRTTSDrEKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLLFP 75
Cdd:PRK07756   18 LGILLPVVALTLGRMLRPNKPSA-AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP 83
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 31-114 1.56e-07

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 46.20  E-value: 1.56e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917  31 DREKSSPFECGFDPLGSARLP--FSLRFFLLAVIFLIFDVEIVLLFPIISTLSmSASASALFGGILFLLILIIGLLHEWR 108
Cdd:PRK07928   34 NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFD-ALGVFGLVEMALFMLTVFVAYAYVWR 112


                  ....*.
gi 1199893917 109 EGSLDW 114
Cdd:PRK07928  113 RGGLEW 118
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-81 2.52e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 40.26  E-value: 2.52e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893917   1 MSLLFSSMLALMIPAIVLILAWVLSYRTtSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIV-LLFPIIST 79
Cdd:MTH00092    2 LVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVmFLGLLVSD 80


                  ..
gi 1199893917  80 LS 81
Cdd:MTH00092   81 FS 82
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 2-73 1.87e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.95  E-value: 1.87e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1199893917   2 SLLFSSMLALMIpaIVLILAWVLSY----RTTSDREKSSPFECGFDPLGSARLPFSLRFFLLAVIFLIFDVEIVLL 73
Cdd:MTH00060    3 VLLFVFFVFFLL--FLVIYFFHSGLwnnkIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLL 76
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
34-75 2.07e-04

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 38.11  E-value: 2.07e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1199893917  34 KSSPFECGFDPLGSARlPFSLRFFLLAVIFLIFDVEIVLLFP 75
Cdd:PRK08489   47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFP 87
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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