|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
17-561 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 630.34 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 17 YSIMILPLTIYFCVSNKWLLMEWDIITTSTATLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVML 96
Cdd:MTH00151 14 YSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVML 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 97 FVMSMNLLVFIPNMASLLIGWDGLGIVSFALVIYYENPKSLAAGMITALANRIGDVMLIIAITLSINQGFWSSNHFIFHP 176
Cdd:MTH00151 94 FVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSILSMWDFK 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 177 FSWVVMAAITVAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLM 256
Cdd:MTH00151 174 LSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTLLM 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 257 AGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAIIYNNSHNQDIRTMGNIWKQMP 336
Cdd:MTH00151 254 AGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLP 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 337 LTISCLNTANLALCGAPFMAGFYSKDLILETMLSSNSNMIILLLVFFATGLTATYSIRLSILVLWKQNNHLPFSSFSDEY 416
Cdd:MTH00151 334 LTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDED 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 417 WQMTSPMMILTMGAIFSGFLLQFIIPSFNESLILPLNMKLLTSMVILLGVWSGIMLWNTNTNSSPTTSINhYFLSSMWFL 496
Cdd:MTH00151 414 FYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVKLS-FFFSSMWFL 492
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1199893924 497 ALISSQKTITTPLKTSGKLYNFIDQGWMEIYGGQGSINSLSSLSLSNQHYQNNLVPSFIMMMIVA 561
Cdd:MTH00151 493 SPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLL 557
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
18-561 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 566.70 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 18 SIMILPLTIYFCVSNKWLLMEWDIITTSTATLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLF 97
Cdd:MTH00207 18 SILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLF 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 98 VMSMNLLVFIPNMASLLIGWDGLGIVSFALVIYYENPKSLAAGMITALANRIGDVMLIIAITLSINQGFWSSNHFIFHPF 177
Cdd:MTH00207 98 VLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSITNMWQTDM 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 178 SWVVMAAITVAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMA 257
Cdd:MTH00207 178 NNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMA 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 258 GIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAIIYNNSHNQDIRTMGNIWKQMPL 337
Cdd:MTH00207 258 GLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPL 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 338 TISCLNTANLALCGAPFMAGFYSKDLILETMLSSNSNMIILLLVFFATGLTATYSIRLSILVLWKQNNHLPFSSFSDEYW 417
Cdd:MTH00207 338 TTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLEDEDK 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 418 QMTSPMMILTMGAIFSGFLLQFIIPSFNESLILPLNMKLLTSMVILLGVWSGIMLWNTNTNSSPT---TSINHYFLSSMW 494
Cdd:MTH00207 418 SLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLlinNPLSHFASCLMW 497
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1199893924 495 FLALISSQKTITTPLKTSGKLYNFIDQGWMEIYGGQGSINSLSSLSLSNQHYQNNLVPSFIMMMIVA 561
Cdd:MTH00207 498 FLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMMSFVL 564
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
18-560 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 528.17 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 18 SIMILPLTIYFCVSNKWLLMEWDIITTSTATLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLF 97
Cdd:MTH00165 15 SLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLF 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 98 VMSMNLLVFIPNMASLLIGWDGLGIVSFALVIYYENPKSLAAGMITALANRIGDVMLIIAITLSINQGFWS----SNHFI 173
Cdd:MTH00165 95 VLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFGSWNfifyLDFMK 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 174 FHPFSWVVMAAITVAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWsMLFSSLT 253
Cdd:MTH00165 175 NSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFFSKFL-LLISLLT 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 254 LLMAGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAIIYNNSHNQDIRTMGNIWK 333
Cdd:MTH00165 254 MFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGGLSN 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 334 QMPLTISCLNTANLALCGAPFMAGFYSKDLILETMLSSNSNMIILLLVFFATGLTATYSIRLSILVLWKQNNHLPFSSFS 413
Cdd:MTH00165 334 FMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLS 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 414 DEYWQMTSPMMILTMGAIFSGFLLQFIIPSFNESLILPLNMKLLTSMVILLGVWSGIMLWNTNTNSSPTTSINH---YFL 490
Cdd:MTH00165 414 DESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLKNYklsSFL 493
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 491 SSMWFLALISSQKTITTPLKTSGKLYNFIDQGWMEIYGGQGSINSLSSLSLSNQHYQNNLVPSFIMMMIV 560
Cdd:MTH00165 494 GSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLL 563
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
26-559 |
4.58e-172 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 499.17 E-value: 4.58e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 26 IYFCVSNKWLLMEWDIITTSTATLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLV 105
Cdd:MTH00209 21 VIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 106 FIPNMASLLIGWDGLGIVSFALVIYYENPKSLAAGMITALANRIGDVMLIIAITLSINQGFWSSNHFIFHP-FSWVVMAA 184
Cdd:MTH00209 101 FVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWNIFYLNFNSnLGSVISVL 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 185 ITVAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFE 264
Cdd:MTH00209 181 IVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMSANVE 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 265 FDLKKIIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAIIYNNSHNQDIRTMGNIWKQMPLTISCLNT 344
Cdd:MTH00209 261 SDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNI 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 345 ANLALCGAPFMAGFYSKDLILETMLSSNSNMIILLLVFFATGLTATYSIRLSILVLWKQNNHLPFSSFSDEYWQMTSPMM 424
Cdd:MTH00209 341 ANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLKPML 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 425 ILTMGAIFSGFLLQFIIPSFNESLILPLNMKLLTSMVILLGVWSGIMLWNTNTNSSPTTSINhYFLSSMWFLALISSQKT 504
Cdd:MTH00209 421 VLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKGYKVN-YFLSQMWFLPDLSSQPV 499
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 1199893924 505 ITTPLKTSGKLYNFIDQGWMEIYGGQGSINSLSSLSLSNQHYQNNLVPSFIMMMI 559
Cdd:MTH00209 500 NKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMM 554
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
17-559 |
3.67e-126 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 382.76 E-value: 3.67e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 17 YSIMILPLTIYFCVSNKWLLMEWDIITTSTATLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVML 96
Cdd:MTH00211 39 FFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 97 FVMSMNLLVFIPNMASLLIGWDGLGIVSFALVIYYENPKSLAAGMITALA-NRIGDVMLIIAITLS-INQGFWS-SNHFI 173
Cdd:MTH00211 119 FLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIyNRIGDIGLLLSMVWLlLNLNSWEiSQLFI 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 174 FHPFSWVVMAAITVAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLT 253
Cdd:MTH00211 199 LNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALT 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 254 LLMAGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAIIYNNSHNQDIRTMGNIWK 333
Cdd:MTH00211 279 MLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSK 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 334 QMPLTISCLNTANLALCGAPFMAGFYSKDLILETMLSSNSNMIILLLVFFATGLTATYSIRLSILVLWKQNNHLPFSSFS 413
Cdd:MTH00211 359 NLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPIN 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 414 DEYWQMTSPMMILTMGAIFSGFLL-QFIIPSFNESLILPLNMKLLTSMVILLGVWSGIMLWNTNTNSSPTTSinHYFLSS 492
Cdd:MTH00211 439 ENYKLLKNPLKRLALGSILAGFIItSNLPPEKPEILSLPFLLKLMPLLVTIVGLLLGLELVNLTHKQLKTST--LSFSNM 516
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1199893924 493 MWFLALISSQKTITTPLKTSGKL-YNFIDQGWMEIYGGQGSINSLSSLSLSNQHYQNNLVPSFIMMMI 559
Cdd:MTH00211 517 LGYYPPIIHRLLPKLSLKWGQTLsTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLL 584
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
19-561 |
1.66e-110 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 342.53 E-value: 1.66e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 19 IMILPLTIYFCVSNKWLLMEWDIITTSTATLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFV 98
Cdd:MTH00004 46 ISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 99 MSMNLLVFIPNMASLLIGWDGLGIVSFALV-IYYENPKSLAAGMITALANRIGDVMLIIAIT-LSINQGFWSSNH-FIFH 175
Cdd:MTH00004 126 IAMLILITANNMFQLFIGWEGVGIMSFLLIgWWSGRAEANTAALQAIIYNRIGDIGLILSMAwLAMTLNTWEIQQlFSPT 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 176 PFSWVVMAAITVAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLL 255
Cdd:MTH00004 206 QTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 256 MAGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAIIYNNSHNQDIRTMGNIWKQM 335
Cdd:MTH00004 286 FAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTL 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 336 PLTISCLNTANLALCGAPFMAGFYSKDLILETMLSSNSNMIILLLVFFATGLTATYSIRLSILVLWKQNNHLPFSSFSDE 415
Cdd:MTH00004 366 PITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINEN 445
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 416 YWQMTSPMMILTMGAIFSGFLLQ-FIIPSFNESLILPLNMKLLTSMVILLGVWSGIMLWNTNTNSSPTTSINHY-FLSSM 493
Cdd:MTH00004 446 TPTIINPITRLALGSILAGLLISsTILPTKTPPMTMPTTTKLAALIVTILGILLALELSNMTTTLTPPKQNTLHnFSNQL 525
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1199893924 494 WFLALISSQKTITTPLKTSGKLYN-FIDQGWMEIYGGQGSINSLSSLSLSNQHYQNNLVP----SFIMMMIVA 561
Cdd:MTH00004 526 AFFNPLTHRLLPMTLLKSSQKIAThLIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKnyltSFALTILLL 598
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
36-473 |
6.53e-103 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 322.87 E-value: 6.53e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 36 LMEWdiITTSTATLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLI 115
Cdd:COG1009 61 LYTW--IPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFV 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 116 GWDGLGIVSFALV-IYYENPKSLAAGMITALANRIGDVMLIIAI--------TLSINQGFWSSNHFIFHPFSWVVMAAIT 186
Cdd:COG1009 139 FWELVGLCSYLLIgFWYEKPSARRAARKAFLVTRVGDLGLLLGIlllgaiagTLNFSELLAAAPTILSSPLLTLILLLLL 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 187 VAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFD 266
Cdd:COG1009 219 LGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTD 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 267 LKKIIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAIIYNNsHNQDIRTMGNIWKQMPLTISCLNTAN 346
Cdd:COG1009 299 IKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGA 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 347 LALCGAPFMAGFYSKDLILETMLSSNS-NMIILLLVFFATGLTATYSIRLSILVLWKQNNHLPFSSFSDEYWQMTSPMMI 425
Cdd:COG1009 378 LSLAGIPPFAGFFSKEAILEAALEAGGlGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVV 457
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1199893924 426 LTMGAIFSGFLLQFIIPSF---------NESLILPLNMKLLTSMVILLGVWSGIMLW 473
Cdd:COG1009 458 LAVLSLVLGLLLPGLLEGLlapaavlggELHLAHGLLLNALPLLLSLLGIALGYLLY 514
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
54-559 |
4.21e-99 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 313.83 E-value: 4.21e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 54 ILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALVIYYEN 133
Cdd:MTH00208 104 IFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTT 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 134 PKSLAAGMITA-LANRIGDVMLIIAITLS-INQGFWSSNHFIF---HPFSWVVMA--AITVAAMTKSAQIPFSSWLPAAM 206
Cdd:MTH00208 184 RNDANSSALQAvIYNRIGDIGIILFLSLSlINFNSWNLNEILSlnnSNSFLINILlfGILLAAAGKSAQFGLHPWLPAAM 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 207 AAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQLGVMMLSI 286
Cdd:MTH00208 264 EGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAI 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 287 SLKMPMLALFHLYTHAMFKALLFLCAGAIIYNNSHNQDIRTMGNIWKQMPLTISCLNTANLALCGAPFMAGFYSKDLILE 366
Cdd:MTH00208 344 GLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILE 423
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 367 TMLSSNSNMIILLLVFFATGLTATYSIRLSILVLWKQNNHLPFSSFSDEYWQMTSPMMILTMGAIFSG-FLLQFIIPsfN 445
Cdd:MTH00208 424 AGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGwFFSNFVFN--L 501
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 446 ESLILPLNMKLLTSMVILLGVWSGIMLWNtNTNSSPTTSINHYFLSSMWFLALISSQKTITTPLKTSGKLYN-FIDQGWM 524
Cdd:MTH00208 502 PPLTLPLILKSLPLIVTIIGAAFSFSFLL-SLSSNPINSNFFSFLSNQWFFVNISHSIIISFSFFTSLFGSTrTLDRGWS 580
|
490 500 510
....*....|....*....|....*....|....*
gi 1199893924 525 EIYGGQGSINSLSSLSLSNQHYQNNLVPSFIMMMI 559
Cdd:MTH00208 581 ENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSST 615
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
19-560 |
1.24e-97 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 309.15 E-value: 1.24e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 19 IMILPLTIYFCVSNKWLLMEWDIITTSTATLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFV 98
Cdd:MTH00066 44 ISLIPLMIFINQGLESITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFL 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 99 MSMNLLVFIPNMASLLIGWDGLGIVSFALV-IYYENPKSLAAGMITALANRIGDVMLIIAIT-LSINQGFWSSNH-FIFH 175
Cdd:MTH00066 124 IAMMILVTANNLFQLFIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAwLAMNTNSWELQQiFLLN 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 176 PFSWVVMAAITVAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLL 255
Cdd:MTH00066 204 DNSTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTL 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 256 MAGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAIIYNNSHNQDIRTMGNIWKQM 335
Cdd:MTH00066 284 FTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKAL 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 336 PLTISCLNTANLALCGAPFMAGFYSKDLILETMLSSNSNMIILLLVFFATGLTATYSIRLSILVLWKQNNHLPFSSFSDE 415
Cdd:MTH00066 364 PITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINEN 443
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 416 YWQMTSPMMILTMGAIFSGFLLQF-IIPSFNESLILPLNMKLLTSMVILLGVWSGIMLWNTNTNSSPTTSiNHYFLSSMW 494
Cdd:MTH00066 444 NPLIINPIKRLAWGSIIAGLLIIFnILPMKPQILTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTK-MHSFSNLLA 522
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1199893924 495 FLALISSQKTITTPLKTSGKL-YNFIDQGWMEIYGGQGSINSLSSLSLSNQHYQNNLVPSFIMMMIV 560
Cdd:MTH00066 523 FFPTIIHRLSPKTNLNSGQNIaTHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLI 589
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
36-495 |
2.46e-91 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 293.22 E-value: 2.46e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 36 LMEWdiITTSTATLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLI 115
Cdd:PRK06590 65 LWTW--ISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFF 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 116 GWDGLGIVSFALV-IYYENPKSLAAGMITALANRIGDVMLIIAI--------TLSINQGFWSSNHFIFHPFSWVVMAAIT 186
Cdd:PRK06590 143 GWEGVGLCSYLLIgFWYKKPSAGAAAMKAFIVNRVGDVGLALGIfllfaefgSLNYDEVFAAAPQFFGLGWSALTLICLL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 187 --VAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFE 264
Cdd:PRK06590 223 lfIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQ 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 265 FDLKKIIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAIIYNNSHNQDIRTMGNIWKQMPLTISCLNT 344
Cdd:PRK06590 303 TDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLI 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 345 ANLALCGAPFMAGFYSKDLILETMLsSNSNMIILLLVFFATGLTATYSIRLSILVL---WKQNNHLPFSSfsdeYWQMTS 421
Cdd:PRK06590 383 GTLALIGIPPFAGFFSKDEILEAAF-ANGHINLFVAGLVGAFLTAFYSFRLIFLVFhgkEKEKIHHPHES----PAVMTL 457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 422 PMMILTMGAIFSGFllqFIIPSFNESL-------------ILPLNMKLLTSMVILLGVWSGIMLWNTNTNSSPTTSINHY 488
Cdd:PRK06590 458 PLIVLAVLSVFAGA---LIVPPFLGVLplttelahgeaehHLPVWVALLPLVVALAGIALAWLLYLKKPTLPTSIAAPGR 534
|
....*..
gi 1199893924 489 FLSSMWF 495
Cdd:PRK06590 535 FLYTLLR 541
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
19-525 |
7.49e-91 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 291.37 E-value: 7.49e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 19 IMILPLTIYFCVSNKWLLMEWDIITTSTATLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFV 98
Cdd:MTH00108 46 ISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 99 MSMNLLVFIPNMASLLIGWDGLGIVSFALV-IYYENPKSLAAGMITALANRIGDVMLIIAIT-LSINQGFWSSNH-FIFH 175
Cdd:MTH00108 126 ITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAILYNRIGDIGFILAMAwFLLNLNSWDLQQiFMLN 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 176 P-FSWVVMAAITVAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTL 254
Cdd:MTH00108 206 PnNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITT 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 255 LMAGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAIIYNNSHNQDIRTMGNIWKQ 334
Cdd:MTH00108 286 LFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKT 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 335 MPLTISCLNTANLALCGAPFMAGFYSKDLILETMLSSNSNMIILLLVFFATGLTATYSIRLSILVLWKQNNHLPFSSFSD 414
Cdd:MTH00108 366 LPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINE 445
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 415 EYWQMTSPMMILTMGAIFSGFLL-QFIIPSFNESLILPLNMKLLTSMVILLGVWSGIMLWNTNTNSSPTTSIN-HYFLSS 492
Cdd:MTH00108 446 NNPLLINPIKRLLLGSIFAGFLIsNNIPPTTIPQMTMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNtFKFSNM 525
|
490 500 510
....*....|....*....|....*....|....
gi 1199893924 493 MWFLALISSQKTITTPLKTSGKL-YNFIDQGWME 525
Cdd:MTH00108 526 LGYFPTIMHRLPPYMNLTMSQKLaSMLLDLIWLE 559
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
39-473 |
3.69e-90 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 289.95 E-value: 3.69e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 39 WDIITTSTATLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWD 118
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 119 GLGIVSFALV-IYYENPKSLAAGMITALANRIGDVMLIIAITLSINQgFWSSNH------FIFHPFSWVVMAAIT--VAA 189
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWY-FGTLNFqevfalAPGAFFSALTLICLLlfIGA 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 190 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKK 269
Cdd:TIGR01974 224 MGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKR 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 270 IIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAIIYNNSHNQDIRTMGNIWKQMPLTISCLNTANLAL 349
Cdd:TIGR01974 304 ILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLAL 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 350 CGAPFMAGFYSKDLILETMLSSNSNMIILLLVFFATGLTATYSIRLSILVLWKQNNHLPFSSFSDEYWQMTSPMMILTMG 429
Cdd:TIGR01974 384 IGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVG 463
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 1199893924 430 AIFSGFLLQFIIPSFNESLI-----------LPLNMKLLTSMVILLGVWSGIMLW 473
Cdd:TIGR01974 464 SVFAGFFIVPLFEFLKGVLPtsaepalehhhVPALEIWSPTAVAILGILLAYLLY 518
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
65-560 |
8.11e-81 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 265.40 E-value: 8.11e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 65 VVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALV-IYYENPKSLAAGMIT 143
Cdd:MTH00020 88 VVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFWLTRIEANKAAIKA 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 144 ALANRIGDVMLIIAI--------TLSINQGFWSSNHFIFHPFSWVVMAaITVAAMTKSAQIPFSSWLPAAMAAPTPVSAL 215
Cdd:MTH00020 168 MLVNRVGDIGLLLAMfllwdrfgSLDFSSVFNMVVSAPSSDITLICLF-LFIGAVGKSAQLGLHTWLPDAMEGPTPVSAL 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 216 VHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPMLAL 295
Cdd:MTH00020 247 IHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISL 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 296 FHLYTHAMFKALLFLCAGAIIYNNSHNQDIRTMGNIWKQMPLTISCLNTANLALCGAPFMAGFYSKDLILETMLSSNSNM 375
Cdd:MTH00020 327 FHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLI 406
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 376 IILLLVFFATGLTATYSIRLSILVLWKQNN--HLPFSSFSDEYWQMTSPMMILTMGAIFSGFLLQFIIPSF--NESLILP 451
Cdd:MTH00020 407 FAYWLGCFSALLTAFYSIRLIYLTFLSNTNlkKAVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIWSFqiTLPPIVP 486
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 452 LNMKLLTSMVILLGVWSGIMLWNT-----NTNSSPTTSINHYFLSSMWFLALISSQKTITTPLKTSGKL-YNFIDQGWME 525
Cdd:MTH00020 487 LSIKLLPVFLSLGGIGLVIILYFYssktfRVPFSFIGRNSYTFLGSAWQFNYILNYFLIKKIWKGGHLIsYRTIDKGVLE 566
|
490 500 510
....*....|....*....|....*....|....*
gi 1199893924 526 IYGGQGSINSLSSLSLSNQHYQNNLVPSFIMMMIV 560
Cdd:MTH00020 567 LVGPKGISNFLIILTQGLSSLQSGLVFNYALVILI 601
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
19-531 |
6.97e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 257.45 E-value: 6.97e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 19 IMILPLTIYFCVSNKWLLMEWDIITTSTATLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFV 98
Cdd:MTH00137 50 VSLLPLFLFLNQGAETIITNWNWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFL 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 99 MSMNLLVFIPNMASLLIGWDGLGIVSFALV-IYYENPKSLAAGMITALANRIGDVMLIIAI--------TLSINQGFWSS 169
Cdd:MTH00137 130 IAMIILVTANNMFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAVIYNRVGDIGLILAMawmatnlnSWEIQQIFALS 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 170 NHFifhPFSWVVMAAItVAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLF 249
Cdd:MTH00137 210 KDF---DLTLPLLGLI-LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 250 SSLTLLMAGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAIIYNNSHNQDIRTMG 329
Cdd:MTH00137 286 GALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMG 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 330 NIWKQMPLTISCLNTANLALCGAPFMAGFYSKDLILETMLSSNSNMIILLLVFFATGLTATYSIRLSILVLWKQNNHLPF 409
Cdd:MTH00137 366 GLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPL 445
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 410 SSFSDEYWQMTSPMMILTMGAIFSGFLL-QFIIPSFNESLILPLNMKLLTSMVILLGVWSGIMLWN-TNTNSSPTTSINH 487
Cdd:MTH00137 446 SPINENNPAVINPIKRLAWGSIIAGLLItSNILPLKTPVMTMPPLLKLAALIVTILGLLIALELASlTNKQFKPTPTLPP 525
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 1199893924 488 YFLSSM--WF----------LALISSQkTITTPLktsgklynfIDQGWMEIYGGQG 531
Cdd:MTH00137 526 HHFSNMlgFFpaiihrltpkLNLTLGQ-TIATQM---------VDQTWLEKTGPKG 571
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
39-560 |
1.22e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 230.28 E-value: 1.22e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 39 WDIITTSTATLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWD 118
Cdd:MTH00210 62 WRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 119 GLGIVSFALV-IYYENPKSLAAGMITALANRIGDVMLIIAITLSINQG--------FWSSNHFIFHPFSWVVMAAITVAA 189
Cdd:MTH00210 142 GVGLCSYLLInFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFgtlefstiSSLLVTNINKESLTIICLLLFIGA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 190 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKK 269
Cdd:MTH00210 222 VGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKK 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 270 IIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAIIYNNSHNQDIRTMGNIWKQMPLTISCLNTANLAL 349
Cdd:MTH00210 302 VIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSL 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 350 CGAPFMAGFYSKDLILEtmLSSNSNMIILL--LVFFATGLTATYSIRLSILVLWKQNN--HLPFSSFSDEYWQMTSPMMI 425
Cdd:MTH00210 382 MGFPYLTGFYSKDLILE--LTYDKYYIAFAywLGSFSALLTAFYSIRLIYLTFITNTNskKEVFIGVHESSWNITFPLLL 459
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 426 LTMGAIFSGFLLQFIIPSFNESLILPLNMKLLTSMVILLGVWSGIMLWNTNT----NSSPTTSINHY-----FLSSMWFL 496
Cdd:MTH00210 460 LAFGSIFVGYLGKEVVLSNVIPPIVPNSIKMIPLLFSLLGALLAFVIYNSMVflikISRRGVSIRLYhviytFLNSAWQF 539
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1199893924 497 ALISSQKTITTPLKTSGKL-YNFIDQGWMEIYGGQGSINSLSSLSLSNQHYQNNLVPSFIMMMIV 560
Cdd:MTH00210 540 NYVINHFIVKNIWKFGHLItYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALIMII 604
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
58-395 |
9.86e-62 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 212.47 E-value: 9.86e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 58 LSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALVIYYENPKSL 137
Cdd:MTH00095 46 NSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSN 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 138 AAGMITALANRIGDVMLIIAITLSInqgFWSSNHFIFHPFSWVVMAAITVAAMTKSAQIPFSSWLPAAMAAPTPVSALVH 217
Cdd:MTH00095 126 SGAMNTALTNRIGDFFIFLFFSGFI---FSSYYFFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVH 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 218 SSTLVTAGVFLLIRFyPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPMLALFH 297
Cdd:MTH00095 203 SSTLVTAGLILLMNF-SYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIH 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 298 LYTHAMFKALLFLCAGAIIYNNSHNQDIRTMGNIWK-------QMPLTISClntanlaLCGAPFMAGFYSKDLILETMLS 370
Cdd:MTH00095 282 LLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNlpmfiqlQLLVTLFC-------LCGLMFTSGMVSKELILELFFF 354
|
330 340
....*....|....*....|....*
gi 1199893924 371 SNSNMIILLLVFFATGLTATYSIRL 395
Cdd:MTH00095 355 NNYMIFFSLMFFFSVFLTFGYSYRL 379
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
53-531 |
3.38e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 208.66 E-value: 3.38e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 53 VILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALVIYYE 132
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 133 NPKSLAAGMITAL-ANRIGDVMLIIAITLS---------------------INQGFWSSNHFIFHPFSWVVMAAI-TVAA 189
Cdd:MTH00032 156 TRIQANKAAIKAIvVNRVGDVGVILGMVLIyktigsldfltfnggsvgsgiMDRGYYGGGAYESPLAPFAIIGILlLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 190 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKK 269
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKK 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 270 IIALSTLSQLGVMMLSISLKMPM-LALFHLYTHAMFKALLFLCAGAIIYN-NSHNQDIRTMGNIWKQMPLTISCLNTANL 347
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALLFLSAGSVIHStTVDEQDMRKMGGLIHSIPFTYTMMLIGSF 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 348 ALCGAPFMAGFYSKDLILETMLS------------------------------------SNSNMIILLLVFFATGLTATY 391
Cdd:MTH00032 396 SIMGLPYLTGFYSKDLILELTYSgrnmgipfgssllkiqgdigikkddrgsiggpegypSRGSAFAFWLGTVAALLTAFY 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 392 SIRLSILVLWKQNNHLPFSSFSDEY----WQMTSPMMILTMGAIFSGFLLQFIIPSFNESLILPLNMKLLTSMVILLGVw 467
Cdd:MTH00032 476 SIRLVYITFIISPNSPKESLISSHInivdKRVLTVLSLLCFGAIFVGYLIQDILIGDIEHPIVPPLIKVMPTLMGLFGM- 554
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1199893924 468 sGIMLWNTNTNSSPTTSINHYFLSSMWFLALIS-----------SQKTITTPLKTSGK--LYNFIDQGWMEIYGGQG 531
Cdd:MTH00032 555 -GLCLWAQKGTREGELYWGFDPIGPSFLLSIYSflggawqgdhlINKLVAIPLFSFGHwgIYKTLDRGWLELFGPQG 630
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
48-436 |
7.69e-57 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 202.18 E-value: 7.69e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 48 TLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFAL 127
Cdd:PRK07376 82 HLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLL 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 128 VIYYENPKSLA-AGMITALANRIGDVMLIIAItLSInqgFWSSNHFIFH---------------PFSWVVMAAITV--AA 189
Cdd:PRK07376 162 VGFWYDRKGAAdAAQKAFVVNRVGDFGLLLGI-LGL---FWATGSFDFDgiadrlselvssgavSGWLALLLCILVflGP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 190 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKK 269
Cdd:PRK07376 238 MAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 270 IIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAIIY--------NNSHNQDIRTMGNIWKQMPLTISC 341
Cdd:PRK07376 318 GLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHgmeevvghDPVLAQDMRLMGGLRKYMPITAIT 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 342 LNTANLALCGAPFMAGFYSKDLILEtmLSSNSNMIILLLVFFATGLTATYSIRL-----------------SILVLWKQN 404
Cdd:PRK07376 398 FLIGCLAISGIPPFAGFWSKDEILG--AAFEANPALWFVGFLTAGMTAFYMFRMyfltfegefrgndkelqKELLAAADA 475
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1199893924 405 NHLPFSSFSDEY-------------WQMTSPMMILTMGAIFSGFL 436
Cdd:PRK07376 476 PGHHEGHHEEHGehhhhsgsphespWTMTLPLVVLAVPSVLIGLL 520
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
23-395 |
6.87e-50 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 185.63 E-value: 6.87e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 23 PLTIYFCVSNKWLLMEWDIITTSTA----------------TLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKF 86
Cdd:PRK12650 29 PLAAIFVAAAGLLLKELPPILDGDAltwsvtwipdllgngvDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKG 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 87 LARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALvIYYENPKSLAAGMITALANRIGDVMLIIAITLSINQGF 166
Cdd:PRK12650 109 NTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFL-IARSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTG 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 167 WSSNHFIFHPFSW--------VVMAAITVAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISS 238
Cdd:PRK12650 188 TTSLSGILHSDVWaekpglttVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHD 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 239 YSSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPM---LALFHLYTHAMFKALLFLCAGaI 315
Cdd:PRK12650 268 VAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIG-V 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 316 IYNNSHNQDIRTMGNIWKQMPLTISCLNTANLALCGAPFMAGFYSKDLILETMLSS--NSNMIILLLVFFATG--LTATY 391
Cdd:PRK12650 347 VDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEApgGNAGVVLLLVGAALGavFTFAY 426
|
....
gi 1199893924 392 SIRL 395
Cdd:PRK12650 427 SARL 430
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
73-480 |
1.66e-48 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 176.22 E-value: 1.66e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 73 VLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALVIYYENPKSLAAGMITALANRIGDV 152
Cdd:MTH00063 61 SLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDV 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 153 MLIIAITLSInqgFWSSNHFIFHPFSWVVMaaitvaaMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRf 232
Cdd:MTH00063 141 CLFLLIGLSC---WGGSGSFLCCLFFFLIV-------FTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR- 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 233 YPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCA 312
Cdd:MTH00063 210 YDYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLV 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 313 GAIIYNNSHNQDIR-----TMGNIWkqmplTISCLNTANLALCGAPFMAGFYSKDLILETMLSSNSNMIILLLVFFATGL 387
Cdd:MTH00063 290 GDVMSGSGGSQSSNcvyssILYGSW-----NLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFL 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 388 TATYSIRLSILVlwkqNNHLPFSSFSDEYWQMTSPMMILTMGAI-FSGFLLqfiipsFNESLILPLNMKLLTSMVILLGV 466
Cdd:MTH00063 365 SYLYSFRLCLIL----FGVKSSLSSGVRFLFFNSGLMVFLWLFInYYVFLL------LDEVVYLGVFISLVLLLVQLLGL 434
|
410
....*....|....
gi 1199893924 467 WSGIMLWNTNTNSS 480
Cdd:MTH00063 435 LVGVLFYDSNLFSN 448
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
55-399 |
1.91e-48 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 174.18 E-value: 1.91e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 55 LDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALVIYYENP 134
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 135 KSLAAGMITALANRIGDVMLIIAI--------TLSINQGFWSSNHfIFHPFSWVVMAAITVAAMTKSAQIPFSSWLPAAM 206
Cdd:COG0651 154 EALRAGLKYLILNLVGSALFLLGVgllygatgTLNMADLAARLAE-LDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAY 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 207 A-APTPVSALVhSSTLVTAGVFLLIRFYPFISSYSSFFWWSML---FSSLTLLMAGIGANFEFDLKKIIALSTLSQLGVM 282
Cdd:COG0651 233 PaAPSPVSALL-SGLLTKVGVYAILRVLTLLFGADPALFLGTLllvLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYI 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 283 MLSISLKMPML---ALFHLYTHAMFKALLFLCAGAIIYnNSHNQDIRTMGNIWKQMPLTISCLNTANLALCGAPFMAGFY 359
Cdd:COG0651 312 LLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIER-ATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFV 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1199893924 360 SKDLILETMLSSNsNMIILLLVFFATGLTATYSIRLSILV 399
Cdd:COG0651 391 SKWLLLQAALEAG-AWLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
34-394 |
1.39e-45 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 172.80 E-value: 1.39e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 34 WLLMEWDIITTSTA-TLTFPVI----------LDPLSLSFSNVVCLISASVLMFSTKYM-DEEKFLARFIWLVMLFVMSM 101
Cdd:PRK12644 40 WVLAQWPAVLAGGApTEVVPWIpslgldlafrLDALAALMSLLVLGVGALVLLYCARYFdDDEPRLGRFAAELVAFAGAM 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 102 NLLVFIPNMASLLIGWDGLGIVSFALVIYYENPKS-----LAAGMITALAnriGDVMLIIAITLSINQGFWSSNHFIFHP 176
Cdd:PRK12644 120 FGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAAsrraaLQALLVTTAG---GLAMLVGIIILGQAAGTYRLSELLADP 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 177 F-SWVVMAA---ITVAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSL 252
Cdd:PRK12644 197 PtGPAVSVAvvlILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 253 TLLMAGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMP--MLA-LFHLYTHAMFKALLFLCAGaIIYNNSHNQDIRTMG 329
Cdd:PRK12644 277 TMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaALAgLAMLLAHALFKAALFLVVG-IIDHSTGTRDIRKLS 355
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1199893924 330 NIWKQMPLT--ISCLNTANLAlcGAPFMAGFYSKDLILETMLSSNSN----MIILLLVFFATGLTATYSIR 394
Cdd:PRK12644 356 GLGRRQPVLavVAALAAASMA--GLPPLLGFVAKEAALEAVLHDGALgpagPVVLAGIVLGSILTVAYSLR 424
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
55-451 |
1.40e-45 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 171.86 E-value: 1.40e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 55 LDPLSLSFSNVVCLISASVLMFSTKYMDEEK-FLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALVIYYEN 133
Cdd:PRK12646 76 LDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYN 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 134 PKSLAAG-----MIT---ALANRIGDVML-IIAITLSINQGFWSSNHFIFHPFSWVVMAAITVAAMTKSAQIPFSSWLPA 204
Cdd:PRK12646 156 NGDSQFGaiqsfMITvfgGLALLVGFIMLyIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPR 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 205 AMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQLGVMML 284
Cdd:PRK12646 236 AMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMA 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 285 SISLK-----------------MPMLALFHLYTHAMFKALLFLCAGaIIYNNSHNQDIRTMGNIWKQMPLTISCLNTANL 347
Cdd:PRK12646 316 MVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVG-IIDHEAGTRDIRILSGMRQLFPKMNLVMTIAAL 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 348 ALCGAPFMAGFYSKDLILETMLSSN--------SNMIILLLVFFATGLTATYSIRLSILVLWKQNNHLPFSSFS-DEYWQ 418
Cdd:PRK12646 395 SMAGVPFLNGFLSKEMFLDALTQTGqlsqfsliSMIIIVFIGVIASIFTFTYALYMVKEVFWGKYDSKVFTKKNiHEPWL 474
|
410 420 430
....*....|....*....|....*....|....
gi 1199893924 419 MTSPMMILTMgaifsGFLLQFIIPS-FNESLILP 451
Cdd:PRK12646 475 FSLPSLILMV-----LVPVIFFVPNiFGKGIIVP 503
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
108-382 |
3.85e-45 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 161.33 E-value: 3.85e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 108 PNMASLLIGWDGLGIVSFALVIYY-ENPKSLAAGMITALANRIGDVMLIIAITLSINQGFWS-----SNHFIFHPFSWVV 181
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLsfdelSKALTGGLNSSGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 182 MA---AITVAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVFLLIRFYP-FISSYSSFFWWSMLFSSLTLLM 256
Cdd:pfam00361 82 LLlflLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLlYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 257 AGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMP---MLALFHLYTHAMFKALLFLCAGAIIYNNSHNQDIRTMGNIWK 333
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1199893924 334 QMPLTISCLNTANLALCGAPFMAGFYSKDLILETMLSSNSNMIILLLVF 382
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVV 289
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
49-387 |
5.02e-45 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 170.10 E-value: 5.02e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 49 LTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALV 128
Cdd:PRK12647 56 VNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLI 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 129 IY-YENPKS----LAAGMITA---LANRIGDVML-IIAITLSINQGFWSSNHFIFHPFSWVVMAAITVAAMTKSAQIPFS 199
Cdd:PRK12647 136 GFnHEREAArraaLQALLVTGgggLALLAGLILLgNVTGTYSLSELLASGDVIREHPLYLAILLLVLGGAFTKSAQFPFH 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 200 SWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQL 279
Cdd:PRK12647 216 FWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSAL 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 280 G--VMMLSISLKMPMLALF-HLYTHAMFKALLFLCAGaIIYNNSHNQDIRTMGNIWKQMPLTISCLNTANLALCGAPFMA 356
Cdd:PRK12647 296 GtlVMLLGLGSELAIKAAVlFLVAHSLYKGALFMVAG-IIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLF 374
|
330 340 350
....*....|....*....|....*....|..
gi 1199893924 357 GFYSKDLILETMLSSNS-NMIILLLVFFATGL 387
Cdd:PRK12647 375 GFLAKELIYEALLEAPLwSLILTVAAVLGNAL 406
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
49-442 |
1.99e-44 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 168.49 E-value: 1.99e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 49 LTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALV 128
Cdd:TIGR00940 67 LNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 129 IY--------YENPKSLAAGMITALANRIGDVML-IIAITLSINQGFWSSNHFIFHPFSWVVMAAITVAAMTKSAQIPFS 199
Cdd:TIGR00940 147 SYwhhrahsrYGAQKSLTITVFGGLAMLGGLILLgKITGSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFH 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 200 SWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQL 279
Cdd:TIGR00940 227 IWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 280 GVMMLSISLKMPML----------------ALFHLYTHAMFKALLFLCAGaIIYNNSHNQDIRTMGNIWKQMPLTISCLN 343
Cdd:TIGR00940 307 GLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAG-IIDHETGTRDIRKLGGLFHIMPITFTLAM 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 344 TANLALCGAPFMAGFYSKDLILETMLSSNS----NMIILLLVF-----FATGLTATYSIRLSILVLWKQ--NNHLPFSSF 412
Cdd:TIGR00940 386 IASAAMAGVPPFNGFLSKEMFFAEAITAHLvnpfDTVTLGYLFpyvatVASVFTFVYSLRFIHGVFFGRpkPEDLPRKPH 465
|
410 420 430
....*....|....*....|....*....|
gi 1199893924 413 SDEYWQMTSPMMILTMGAIFSGFLLQFIIP 442
Cdd:TIGR00940 466 EPPRWMLASPDILVLLVLVFGLFPAQLTGP 495
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
49-394 |
4.80e-42 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 162.28 E-value: 4.80e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 49 LTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALV 128
Cdd:PRK12648 68 LNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 129 IYYENPKSLAAGMITALA-------NRIGDVMLI--IAITLSINQGFWSSNHFIFHPFSWVVMAAITVAAMTKSAQIPFS 199
Cdd:PRK12648 148 GYWHHRADARRGARMALTvtgagglALLAGVLLLghIVGSYDLDVVLAAGDLIRAHPLYPPALVLILLGAFTKSAQFPFH 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 200 SWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQL 279
Cdd:PRK12648 228 FWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHL 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 280 GVMMLSISLKMPM---LALFHLYTHAMFKALLFLCAGaIIYNNSHNQDIRTMGNIWKQMPLTISCLNTANLALCGAPFMA 356
Cdd:PRK12648 308 GLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAG-IIDHETGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLN 386
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1199893924 357 GFYSKDL----ILETMLSSNSNMIILLLVFFATGLTATYSIR 394
Cdd:PRK12648 387 GFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLR 428
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
51-385 |
8.54e-42 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 157.06 E-value: 8.54e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 51 FPVILDPLSLSFSNVVCLISASVLMFSTKYMDEE-------KFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIV 123
Cdd:PRK06525 69 FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPGnrehpvhEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLC 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 124 SFALVIYYENPKSLAAGMITALANRIGDVMLIIAITLsinqGFWSSNHFIFHPFS-------WVVMAAITVAAMTKSAQI 196
Cdd:PRK06525 149 SWALISYYQSPKALRSALKALLITHIGSLGLYLAAAT----LFLQTGTFALSALSglhgslkYLVFLGILFAAWGKSAQL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 197 PFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSML-FSSLTLLMAGIGANFEFDLKKIIALST 275
Cdd:PRK06525 225 PFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVGAvMAIVTLLYGFLMYLPQQDMKRLLAYST 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 276 LSQLGVMMLSISLKMPML------ALFHLYTHAMFKALLFLCAGAIIYNNShNQDIRTMGNIWKQMPLTISCLNTANLAL 349
Cdd:PRK06525 305 ITQLGYMFFGLSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGALSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAI 383
|
330 340 350
....*....|....*....|....*....|....*.
gi 1199893924 350 CGAPFMAGFYSKDLILETMLSSNSNMIILLLVFFAT 385
Cdd:PRK06525 384 TGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLL 419
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
39-399 |
2.86e-38 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 150.04 E-value: 2.86e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 39 WDIITTSTATLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWD 118
Cdd:CHL00025 73 WSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWE 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 119 GLGIVSFALV-IYYENPKSLAAGMITALANRIGDVMLIIAITlsinqGF-WSSNHFIFH---------------PFSWVV 181
Cdd:CHL00025 153 LVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGIL-----GFyWITGSFEFRdlfeifnnliynnevNLLFAT 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 182 MAAIT--VAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGI 259
Cdd:CHL00025 228 LCAFLlfLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGAT 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 260 GANFEFDLKKIIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAII--------YNNSHNQDIRTMGNI 331
Cdd:CHL00025 308 LALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIhsmepivgYSPDKSQNMVLMGGL 387
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1199893924 332 WKQMPLTISCLNTANLALCGAPFMAGFYSKDLIL-ETMLSSnsnMIILLLVFFATGLTATYSIRLSILV 399
Cdd:CHL00025 388 RKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILnDSWLYS---PIFAIIAWSTAGLTAFYMFRIYLLT 453
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
36-450 |
1.40e-37 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 148.44 E-value: 1.40e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 36 LMEWDIITTS-----TATLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNM 110
Cdd:PRK12649 54 VIHGTIITGSiswlpSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNT 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 111 ASLLIGWDGLGIVSFALVIYY-ENPKSL----AAGMITA---LANRIGDVML-IIAITLSINQGFWSS---NHFIFHPFS 178
Cdd:PRK12649 134 IQLFIFWELTSITSFMLIGYWrHRPESVygatKSLLITAgggLFMFAGFLLLhVITGTYDIATILQDSeliENIKGHPLF 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 179 WVVMAAITVAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAG 258
Cdd:PRK12649 214 LITLILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAG 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 259 IGANFEFDLKKIIALSTLSQLGVMMLS---ISLKMPML----ALFHLYTHAMFKALLFLCAGaIIYNNSHNQDIRTMGNI 331
Cdd:PRK12649 294 FLAFRQTDIKAILAYSTISQLAYLMTMygyTTYHEPGLgvaaATFHLLNHATFKACLFLVAG-IVAHEAATRDIRKLGGL 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 332 WKQMPLTISCLNTANLALCGAPFMAGFYSKDLILETMLSSNSNM-----IILLLVFFATG-LTATYSIRL--SILVLWKQ 403
Cdd:PRK12649 373 RKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSVEMGALIggpftIIIPAVAVLGGvFTFAYSIKLidGIFLGERT 452
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1199893924 404 NNHLPfSSFSDEYWQMTSPMMILTMGAIFSGfllqfIIPSFNESLIL 450
Cdd:PRK12649 453 HDHLP-HHIHEAPYVMLIPAAFLAGLVILFG-----LVPSIPIHNII 493
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
51-395 |
5.60e-36 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 143.53 E-value: 5.60e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 51 FPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEK-FLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALVI 129
Cdd:PRK12645 72 FTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 130 Y-YENPKSLAAG----MIT---ALANRIGDVML-IIAITLSINQGFWSSNHFIFHPFSWVVMAAITVAAMTKSAQIPFSS 200
Cdd:PRK12645 152 YwYEREASRYGAqksmLITvfgGLSMLGGFILLyIMTGSFSIREMIANADEIQNSPLFIPAMILILLGAFTKSAQFPFYI 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 201 WLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQLG 280
Cdd:PRK12645 232 WLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 281 VMML-----SISLKMP-----------MLALFHLYTHAMFKALLFLCAGaIIYNNSHNQDIRTMGNIWKQMPLTISCLNT 344
Cdd:PRK12645 312 LIMSllgigAASLHYQgddskiyaaaiTAAIFHLINHATFKGSLFMIVG-IVDHETGTRDIRKLGGLMTIMPITFTIALI 390
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 345 ANLALCGAPFMAGFYSKDLILETMLS---------SNSNMIILLLVFFATGLTATYSIRL 395
Cdd:PRK12645 391 GALSMAGLPPFNGFLSKEMFFESMLNateanlfslDTWGVLFPVIAWVASVFTFVYSIIF 450
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-441 |
9.33e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 137.32 E-value: 9.33e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 52 PVILDPLSLSFSNVVCLISASVLMFS--TKYMDEEKFLARFiwLVMLF-VMSM-------NLLVFIPNMAslligwdglg 121
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYAigYGEHRQTRFYALF--LLLLAgLLGAlltadlfNLFVFLEIMS---------- 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 122 IVSFALVIYYENPKSLAAGMITALANRIGDVMLIIAITL----------SINQGFWSSNHFIFhpfswVVMAAITVAAMT 191
Cdd:PRK08375 140 LSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLlygvtgtlnmADLAGALAENPTVV-----TAFGFVLLALAL 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 192 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFY-----PFISSYSSFFWWSMLFSSLTLLMAGIGANFEFD 266
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDD 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 267 LKKIIALSTLSQLGVMMLSISL---KMPMLALFHLYTHAMFKALLFLCAGAIIYnNSHNQDIRTMGNIWKQMPLTISCLN 343
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALltpLALAAGLLHLLHHALMKGALFLAAGAIEV-TYGTRRLSELSGLGRRMPLTAAAFA 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 344 TANLALCGAPFMAGFYSKDLILETMLSSNsNMIILLLVFFATGLTATYSIRLSILVLWKQNNHLPFSSFSDEYWQMTSPM 423
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAG-QWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLAPS 452
|
410
....*....|....*...
gi 1199893924 424 MILTMGAIFSGFLLQFII 441
Cdd:PRK08375 453 LALALLSLLLGIYAGPLL 470
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
391-559 |
1.17e-29 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 114.96 E-value: 1.17e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 391 YSIRLSILVLWKQNNHLPFSSFSDEYWQMTSPMMILTMGAIFSGFLLQFIIPSFNESLILPLNMKLLTSMVILLGVWSGI 470
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 471 MLWNTNTNSSPTTSIN--HYFLSSMWFLALISSQKTITTPLKTSGKLYNFIDQGWMEIYGGQGSINSLSSLSLSNQHYQN 548
Cdd:pfam06455 81 ELSNLSNKQLKKSLNFnlHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQK 160
|
170
....*....|.
gi 1199893924 549 NLVPSFIMMMI 559
Cdd:pfam06455 161 GLIKIYLLSFL 171
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-370 |
6.46e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 116.98 E-value: 6.46e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 54 ILDPLSLSFSnvvcLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALVIYYEN 133
Cdd:PRK07234 64 RADALSGYFI----LTNALVTLAVIFYCWESAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRT 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 134 PKSLAAGM-ITALANRIGDVMLIIAITLsinqgFWSSNHFIFHPFSWVVMAAITVAAM---TKSAQIPFSSWLPAAMAAP 209
Cdd:PRK07234 140 DRAIWVGLrYLFYSNVAMLFYLIGAVLV-----YQANGTFAFSGLATADPEAFALIALgllVKGGIFVSGLWLPLTHSEA 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 210 TPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWwsmLFSSLTLLMAGIGANFEFDLKKIIALSTLSQLGVMMLSislk 289
Cdd:PRK07234 215 EPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVR---IFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAA---- 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 290 mPMLALFHLYTHAMFKALLFLCAGAiIYNNSHNQDIRTMGNIWKQMPLTIsclntANLALCGAPFMAGFYSKDLILETML 369
Cdd:PRK07234 288 -PLVGGLYALAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLTM-----ASFSIAGFPLLAGFVSKVLTLKNLL 360
|
.
gi 1199893924 370 S 370
Cdd:PRK07234 361 P 361
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
55-313 |
2.01e-26 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 112.87 E-value: 2.01e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 55 LDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALVIYY-EN 133
Cdd:PRK08168 67 VSGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYpDR 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 134 PKSLAAGMITALANRIGDVMLIIAITLSINQ-GFWSSNHFIFHPFSWVVMAAITVAAM-------TKSAQIPFSSWLPAA 205
Cdd:PRK08168 147 PFARLAAHKKFIADRLAELLLLAAAALAYLEvGSLSLSALWAHLAAQGASPSLQAAALllvlaviLKTAQLPVHGWLIQV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 206 MAAPTPVSALVHSStLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQLGVMMLS 285
Cdd:PRK08168 227 MEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLE 305
|
250 260
....*....|....*....|....*...
gi 1199893924 286 ISLKMPMLALFHLYTHAMFKALLFLCAG 313
Cdd:PRK08168 306 CGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-440 |
2.18e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 112.76 E-value: 2.18e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 54 ILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALVIYYEN 133
Cdd:PRK12667 79 EVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 134 -PKSLAAGMITALANRIGDVMLIIAITL----------------SINQGFWSSNHFIFHPF--SWVVMAAITVAAMTKSA 194
Cdd:PRK12667 159 rGDAVEAAIKYALIGAVGTTLYFLALAFlyatfgtlnmadlsakIRGLSFPLTGGLAGNPPlaLGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 195 QIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVFLLIRFY--------PFISSYSSFFWWSMLFSSLTLLMAGIGANFEF 265
Cdd:PRK12667 239 IFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 266 DLKKIIALSTLSQLGVMMLSISLKMPML---ALFHLYTHAMFKALLFLCAGAIIyNNSHNQDIRTMGNIWKQMPLTISCL 342
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFI-HAAGTRDIDELAGLGRKMPIASFAF 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 343 NTANLALCGAPFMAGFYSKDLILETMLSSNSNMIILLLVFFATgLTATYSIRLSILVLWKQNNHLPFSSfSDEYWQMTSP 422
Cdd:PRK12667 397 LIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGYFRAWYSLFFGKPKSGEEVE-HKESPSMSVV 474
|
410
....*....|....*...
gi 1199893924 423 MMILTMGAIFSGFLLQFI 440
Cdd:PRK12667 475 ILVLALAVLILGILALFL 492
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
37-482 |
4.25e-26 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 112.70 E-value: 4.25e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 37 MEWDIITTSTATLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVfIPNmaSLLIG 116
Cdd:PRK07390 69 LSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLA-LSD--SLFFS 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 117 WDGLGIVSFA---LV-IYYENPKSLAAGMITALANRIGDVMLIIA-ITLSINQGFWSSNHFifhpFSWVVMAAITVAAMT 191
Cdd:PRK07390 146 YVLLEILTLStylLVgFWYAQPLVVTAARDAFLTKRVGDLLLLMGvVALSPLAGTLNFSDL----AAWAATANLDPLTAT 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 192 ------------KSAQIPFSSWLPAAMAAPTPVSALvHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGI 259
Cdd:PRK07390 222 llglaliagptgKCAQFPLHLWLDEAMEGPNPASIL-RNSVVVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 260 GANFEFDLKKIIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAIIYNNShNQDIRTMGNIWKQMPLTI 339
Cdd:PRK07390 301 VAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTTI-TQDLTELGGLWSRMPATT 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 340 SCLNTANLALCGAPFMAGFYSKDLILEtmLSSNSNMIILLLVFFATGLTATYSIRLSILVLWKQNnhLPFSSFSDE-YWQ 418
Cdd:PRK07390 380 LAFLVGSAGLVALLPLGGFWALLRLAD--GLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLGKP--QQKTRRSPEvLWP 455
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1199893924 419 MTSPMMILTMGAIFSGFLLQ--FIIPSFNeslilPLNMKLLTSMVI--LLGVWSGIMLWNTNTNSSPT 482
Cdd:PRK07390 456 MALPMVILAGFTLHLPLLLQqwGLLPSWE-----ALNLWAAPLLVAsgLLGVLLGAWIYLNKAWSRPI 518
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
48-483 |
2.58e-25 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 110.59 E-value: 2.58e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 48 TLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLAR---FIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVS 124
Cdd:PRK08667 68 GLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 125 FALVIY-YENPKSLAAGMITALANRIGDVMLIIAITLSinqgFWSSNHFIFHPFSW------VVMAAITVAAMTKSAQIP 197
Cdd:PRK08667 148 FFLVMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVL----FIQTGSFELSPLGAsagilsLVFLLLFLGFGIKAGIIP 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 198 FSSWLPAAM-AAPTPVSALVhSSTLVTAGVFLLIRFY-PFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIALST 275
Cdd:PRK08667 224 FHKWLPYAHpASPSNVSALM-SGVMLKVAVYGLVRFLmDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 276 LSQLGVMMLSISL-------KMPMLAL-------FHLYTHAMFKALLFLCAGAIIYnNSHNQDIRTMGNIWKQMPLTISC 341
Cdd:PRK08667 303 IENIGIILMGIGLyvifgvyGLDTLALlalggalFHSLNHALFKSLLFLTAGSVVH-ATGTRNIEKMGGLVKLMPYTSAL 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 342 LNTANLALCGAPFMAGFYSKDLILETMLSSNSN--------MIILLLVFFATG-LTATYSIRLSILVLWKqnnhLPFSSF 412
Cdd:PRK08667 382 FLVGAVSIAALPPFNGFASELLLYESFFQSFSVadplikilLFSVLAIFALTSaLAAACFVKAFGITFLA----MPRSQE 457
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1199893924 413 SDEYWQMTSPMMI----LTMGAIFSGFLLQFIIPSFNESLILPlNMKLLTSMVILLGVWSGIMLWNTNTNSSPTT 483
Cdd:PRK08667 458 ARSAKEVSKPMLIgpavLAVACLVLGLFSVQIFSLAGYSFDLP-DLLLVGLLLVIFGVLVFGMVRLFSPRKSRIS 531
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
49-371 |
3.48e-25 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 109.98 E-value: 3.48e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 49 LTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDE--EKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFA 126
Cdd:PRK06521 72 LPFHLRLDALSAFFLLVISLLGAAASLYSLGYFREyeGKGPGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWF 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 127 LVIY-YENPKSLAAGMITALANRIGDVMLIIA-ITLSINQGFWSSNHFIFHPFSWVVMAAITVAAM----TKSAQIPFSS 200
Cdd:PRK06521 152 LVIAnHREAEIRRAGFLYLLMAHAGALAILLAfGLLARESGSYDFAAMRAAHLSPFWASLVFLLALfgfgAKAGLVPLHV 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 201 WLPAAM-AAPTPVSALVhsstlvtAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIG--------ANFEFDLKKII 271
Cdd:PRK06521 232 WLPRAHpAAPSHVSALM-------SGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLALGAIsavlgvlyALAEHDLKRLL 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 272 ALSTLSQLGVMMLSISLKM-------PMLA-------LFHLYTHAMFKALLFLCAGAIIYnNSHNQDIRTMGNIWKQMPL 337
Cdd:PRK06521 305 AYSTIENIGIIFVGLGLAMvfiaygmPLLAalaltaaLYHLLNHALFKSLLFLGAGAVLH-ATGTRDMEKLGGLIRRMPW 383
|
330 340 350
....*....|....*....|....*....|....
gi 1199893924 338 TISCLNTANLALCGAPFMAGFYSKDLILETMLSS 371
Cdd:PRK06521 384 TAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSS 417
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-449 |
4.56e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 108.75 E-value: 4.56e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 55 LDPLSLSFSNVVCLISASVLMFSTKYM--DEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALVIYYE 132
Cdd:PRK06589 81 LEPLGLIFLLLIGFLWICALLYTPKYLaiNNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTR 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 133 NPKSLAAG-------MITALANRIGDVMLIIAITLSINqgFWSSNHFIFHPFswVVMAAITVAAMTKSAQIPFSSWLPAA 205
Cdd:PRK06589 161 NNISLSGGykylkilMISALLLFLPAVILIYTKTGNLD--FVSGGLFSKNQS--IILLLMFIYGIAKTAIFPVHSWLPAA 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 206 MAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSL------TLLMAGIGANFEFDLKKIIALSTLSQL 279
Cdd:PRK06589 237 MVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLifipivSIFYSSLKALKTDNIKKILAYSTISQL 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 280 GVMMLSISLKMPM---LALFHLYTHAMFKALLFLCAGAIIYNNSHNQdIRTMGNIWKQMPLTISCLNTANLALCGAPFMA 356
Cdd:PRK06589 317 SLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGSIYSLKKEDQ-VDKLHGTSKSFPLISFIISISSLSLIGIPIFS 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 357 GFYSKDLILETMlsSNSNMIILLLVFFATGLTATYsirLSILVLWKQNNHLPFSSFSDEYWQMTSPM------MILTMGA 430
Cdd:PRK06589 396 GFISKFLILLAA--SEQNQPWLSIIVMLVVIASSI---LSALYLLKILSSIYKPSLSENSFITKSLPylmqisVITCCCA 470
|
410
....*....|....*....
gi 1199893924 431 IFSGFLLQFIIPSFNESLI 449
Cdd:PRK06589 471 LTLFYFIQILIREFLAYIT 489
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
55-394 |
9.35e-20 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 93.14 E-value: 9.35e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 55 LDPLSLSFSNVVCLISASVLMFSTKYMDEEkflARFIWLVMLFVMSMNLLVFIPN-MASLLIGWDGLGIVSFaLVIYYEN 133
Cdd:PRK08668 67 LTHLSWFFAMISLLVIFSVAFFMVSEKTKN---DAYFNMFALMSLAGVLGVFLANdLLTLYIFWEIMTFSSF-MMVPMGK 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 134 PKSLAAGMITALANRIGDVMLIIAITL-----------SINQGFWSSNHFIFhpfSWVVMAAITVAAMTKSAQIPFSSWL 202
Cdd:PRK08668 143 KESRKASLKYFVLSAIGAYAMLYAIFLiyaktgtfdfaDISQGLINDTSTGF---ALIVFLFLLAFGVAKAGIFPLHVWA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 203 PAAMA-APTPVSAlVHSSTLVTAGVF-LLIRFYPFISSYSSFFWWS-----------MLFSSLTLLMAGIGANFEFDLKK 269
Cdd:PRK08668 220 PDAYSeAPQSFSA-VLSGQLSKLGAYgFLLVLYVLPGTKLFSEFGTyrgvplfnyilAWLGNISIIVGTLMAILQEDIKK 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 270 IIALSTLSQLGVMMLSISLKMPML---ALFHLYTHAMFKALLFLCAGAIIYNNShNQDIRTMGNIWKQMPLTISCLNTAN 346
Cdd:PRK08668 299 LIAYSSVANGGYILVGLGLGTSLGfagGLFHVFNHALFKGLFFLIFAAVIYRTG-TTKISEMGGLIEKMPFTFAMYLVAI 377
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1199893924 347 LALCGAPFMAGFYSKDLILETMLSSNSnMIILLLVFFATGLTATYSIR 394
Cdd:PRK08668 378 ISLAGIPPMSGFASKWLIFEALISKGM-PITAFMAFFGSIGSFLYVFR 424
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
112-365 |
4.52e-18 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 87.64 E-value: 4.52e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 112 SLLIGWDGLGIVSFALVIYYENPKSLAAGMITALANRIGDVMLIIAITLSINQ-GFWSSNHF--IFHPFSWVVMAAITVa 188
Cdd:PRK12668 117 TLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAEtGSFAFGAIagLGGTAAWLILIGFGV- 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 189 amtKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPfissyssffwWSMLFSSLTLLMAGIGANF---EF 265
Cdd:PRK12668 196 ---NAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP----------GTELLIYIGAAMAVYGVFFallEN 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 266 DLKKIIALSTLSQLGVMMLSISLKMPML---ALFHLYTHAMFKALLFLCAGAIIYNNSHNqDIRTMGNIWKQMPLTISCL 342
Cdd:PRK12668 263 DLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTGTE-KLTELGGLYRSMPLTALFC 341
|
250 260
....*....|....*....|...
gi 1199893924 343 NTANLALCGAPFMAGFYSKDLIL 365
Cdd:PRK12668 342 LVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-367 |
2.50e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 85.15 E-value: 2.50e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 55 LDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALVIYY-EN 133
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRnDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 134 PKSLAAGMITALANRIGDVMLIIAITL------SINQGFWSSN-HFIFHPFSWVVMAAITVAAMTKSAQIPFSSWLPAAM 206
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALlygqygTLNMAYLAVKmSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAY 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 207 -AAPTPVSALVHSSTLvtAGVFLLIR----FYPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQLGV 281
Cdd:PRK08376 248 pAAPSSISAMLLVIKQ--AGLYALARvlfsIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGY 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 282 MMLSISLKMPML---------------ALFHLYTHAMFKALLFLCAGAIIYNNShNQDIRTMGNIWKQMPLTISCLNTAN 346
Cdd:PRK08376 326 MLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFLIGA 404
|
330 340
....*....|....*....|.
gi 1199893924 347 LALCGAPFMAGFYSKDLILET 367
Cdd:PRK08376 405 AAIVGLPPFNGFASKWLIYES 425
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
152-443 |
1.14e-16 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 82.82 E-value: 1.14e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 152 VMLIIAITLSINQGFWS------SNHFIFHPFSWVVMAAITVAAMTKSAQIPFSSWLP-AAMAAPTPVSALvHSSTLVTA 224
Cdd:COG1008 176 LMLVAILALYFLAGALTfdiaelAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPdAHVEAPTAGSVL-LAGVLLKM 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 225 GVFLLIRF-YP-FISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQLGVMMLSI-SLKMPML--ALFHLY 299
Cdd:COG1008 255 GGYGLLRFaLPlFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIfALNPLGLqgAVLQMV 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 300 THAMFKALLFLCAGaIIYNNSHNQDIRTMGNIWKQMPLTISCLNTANLALCGAPFMAGFYSKDLILetMLSSNSNMIILL 379
Cdd:COG1008 335 SHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVL--LGAFQVNPWLAI 411
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1199893924 380 LVFFATGLTATYSIRLSILVLW-KQNNHLpfSSFSDEYWQMTSPMMILTMGAIFSGF----LLQFIIPS 443
Cdd:COG1008 412 LAALGLILTAAYLLWMYQRVFFgPLKEEL--AELPDLNPRELAVLAPLAALILLLGLypqpLLDLIEPS 478
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
57-401 |
3.66e-15 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 78.27 E-value: 3.66e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 57 PLSLSFSNVVCLISASVLMFSTKYMDEEKfLARFIWLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALVIYYENPKS 136
Cdd:PRK08377 78 PFAALFVLIIAIVSFIMSIFSLKAVEVEP-IDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 137 LAAGMITALANRIGDVMLIIAITL------SINQGFWSSNHFIFHPF-SWVVMAAITVAAMTKSAQIPFSSWLPAA-MAA 208
Cdd:PRK08377 157 AEASMKYIVLGGIGSSFFLIGVALiygatgTLNMAHIAQLAGTIDPTvAQVGLALLIFGLAVEAELFPLNAWAPDAyQAA 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 209 PTPVSALVhSSTLVTAGVFLLIRFYPFISSYS---SFFWWSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQLGVMMLS 285
Cdd:PRK08377 237 PHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALA 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 286 ISLKMPM---LALFHLYTHAMFKALLFLCAGAIIYNNSHNQdIRTMGNIWKQMPLTISCLNTANLALCGAPFMAGFYSKD 362
Cdd:PRK08377 316 LALGTQAgvdAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKF 394
|
330 340 350
....*....|....*....|....*....|....*....
gi 1199893924 363 LILETMLSSnSNMIILLLVFFATGLTATYSIRLsILVLW 401
Cdd:PRK08377 395 RIILAGLSA-GYTWPVALVLGASVVEAVYYFRL-IHTMW 431
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
185-316 |
4.09e-15 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 78.15 E-value: 4.09e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 185 ITVAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGVFLLIRFYPfISSYSSFFWWSMLFSSLTLLMaGIGANF- 263
Cdd:PRK08601 210 LILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSP-LFHDDIAQILLLIFASISVLI-GTGISLv 286
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1199893924 264 EFDLKKIIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAII 316
Cdd:PRK08601 287 QVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
93-435 |
1.08e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 70.35 E-value: 1.08e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 93 LVMLFVMSMNLL-VFIP-NMASLLIGWDGLGIVSFALVIYYENPKSLAAGMITALANRIGDVMLIIAITLSINQGFWSSN 170
Cdd:TIGR01972 109 YALLLLLEAGVIgVFLAlDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFD 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 171 --HFIFHPFSWVV----MAAITVAAMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVFLLIRFY--PFISSYSS 241
Cdd:TIGR01972 189 llELLNLPLPFGVqtwlFLAFFIAFAVKVPLFPLHTWLPDAHVeAPTAGSVIL-AGVLLKMGTYGFLRFNlpLFPDASLY 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 242 FFWWSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPML---ALFHLYTHAMFKALLFLCAGaIIYN 318
Cdd:TIGR01972 268 FAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGisgAVFQMISHGLITAALFLLVG-VLYE 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 319 NSHNQDIRTMGNIWKQMPLTISCLNTANLALCGAPFMAGFYSKDLILetMLSSNSNMIILLLVFFATGLTATYSIRLSIL 398
Cdd:TIGR01972 347 RAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLIL--LGSFKVNPVVAFLAALGIVLAAAYMLTLYKR 424
|
330 340 350
....*....|....*....|....*....|....*..
gi 1199893924 399 VLWKQNNHLPFSSFSDEYWQMTSPMMILTMGAIFSGF 435
Cdd:TIGR01972 425 VFFGELSNPEVAEFPDLNGREIAVLAPLVVLILFLGL 461
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
192-434 |
2.03e-12 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 69.59 E-value: 2.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 192 KSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYP--FISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKK 269
Cdd:PRK12663 220 KAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTllFPQERELLHPLLATMAAITMVIGALGALAYKDIRR 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 270 IIALSTLSQLGVMMLSISLKMPML---ALFHLYTHAMFKALLFLCAGAIIYnNSHNQDIRTMGNIWKQMPLTISCLNTAN 346
Cdd:PRK12663 299 IAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILI 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 347 LALCGAPFMAGFYSKDLILETMLSSNSnmIILLLVFFATGLTATYSI-RLSILVLWKQNNhLPFSSFSDEYWQMTSPMMI 425
Cdd:PRK12663 378 FAIGGLPPFSGFWGKVLLVQGALDNGA--YILLALMLITSLITMYSLfRIFFLAYWGDKD-GEEVNFKPIPLYRKLPLSI 454
|
....*....
gi 1199893924 426 LTMGAIFSG 434
Cdd:PRK12663 455 LAVVVIAMG 463
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
191-446 |
2.54e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 69.21 E-value: 2.54e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 191 TKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVFLLIRFYP--FISSYSSFFWWSMLFSSLTLLMAGIGANFEFDL 267
Cdd:PRK07691 221 TKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTlfFSHDTSFTHYLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 268 KKIIALSTLSQLGVMMLSISLKMP---MLALFHLYTHAMFKALLFLCAGAIIYNNSHNqDIRTMGNIWKQMPLTISCLNT 344
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTEsgmIGAIYYLIHDMIVKAALFLLIGIMIKITGTT-DLKKMGGLIKRYPVLGWMFFI 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 345 ANLALCGAPFMAGFYSKDLILETMLsSNSNMIILLLVFFaTGLTATYS-IRLSILVLWKQNNHLPFSSfSDEYWQMTSPM 423
Cdd:PRK07691 379 AALSLAGIPPLSGFYGKFFIVEGTF-EAGFYVSGIIVLL-SSLLVLYSvIKIFLKGFWGEPKGYDLNN-KVPVKKLLLPA 455
|
250 260
....*....|....*....|...
gi 1199893924 424 MILTMGAIFSGFLLQFIIPSFNE 446
Cdd:PRK07691 456 VVLVAITILYGLGAEPLYPYVKQ 478
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
191-383 |
1.66e-11 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 66.49 E-value: 1.66e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 191 TKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFEF---D 266
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIFGLLSVLVAAFFLLrqrD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 267 LKKIIALSTLSQLGVMMLSISLKMPM---LALFHLYTHAMFKALLFLCAGAIIYNnSHNQDIRTMGNIWKQMPLTISCLN 343
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGGPLgifAALLHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIRGLLKVSPLTGWGLM 383
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1199893924 344 TANLALCGAPFMAGFYSKDLILETMLSSNSNMIILLLVFF 383
Cdd:PRK06458 384 LGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLL 423
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
196-395 |
5.85e-11 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 64.84 E-value: 5.85e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 196 IPFSSWLPAAMA-APTPVSALvHSSTLVTAGVFLLIRF-YP-FISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIA 272
Cdd:PRK05846 228 FPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFsLPlFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 273 LSTLSQLGVMMLSI-SLKMPML--ALFHLYTHAMFKALLFLCAGaIIYNNSHNQDIRTMGNIWKQMPLTISCLNTANLAL 349
Cdd:PRK05846 307 YSSISHMGFVTLGIfAGNQLGIqgAIFQMISHGLSSAALFLLVG-VLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1199893924 350 CGAPFMAGFYSKDLILetMLSSNSNMIILLLVFFATGLTATYSIRL 395
Cdd:PRK05846 386 LGLPGTSGFVGEFLIL--LGSFQVNPVIAFIATTGLILAAVYSLWL 429
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-415 |
2.03e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 63.21 E-value: 2.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 185 ITVAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFY------PFISSYSSFFWWSMLFSSLTLLMAG 258
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGS 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 259 IGANFEFDLKKIIALSTLSQLGVMMLSISLKMP---MLALFHLYTHAMFKALLFLCAGAIIYNNShNQDIRTMGNIWKQM 335
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGYIILAVSLNTYyglAAAVAYIVNHSIVKSALFMVSGSISYHFG-TTKLEDCLNLWKSM 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 336 PLTISCLNTANLALCGAPFMAGFYSKDLILETMLSSNSNMIILLLVFFATgltatysirLSILVLWKQNNHLPFSSFSDE 415
Cdd:PRK12662 374 PKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSG---------LSVIYVWKIVEALYFESRMVE 444
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
192-452 |
4.40e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 62.08 E-value: 4.40e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 192 KSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFEF---DL 267
Cdd:PRK08676 219 KSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGLGIFSIAVAAFSMLsqrNL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 268 KKIIALSTLSQLGVMMLSISLKMPML---ALFHLYTHAMFKALLFLCAGaIIYNNSHNQDIRTMGNIWKQMPLTISCLNT 344
Cdd:PRK08676 298 KKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVIL 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 345 ANLALCGAPFMAGFYSKDLILETM--LSSNSNMIILLLVFFATGLTATYSIRLSILVLWKQNNHLPFSSfsdeYWQMTSP 422
Cdd:PRK08676 377 GSAAIIGMPPFPLFLSKFFILLQLggISVWLVLAVLLLLLLAASSFAIFLLKAFTRVSEGNADRPVFRT----PLSMKLP 452
|
250 260 270
....*....|....*....|....*....|
gi 1199893924 423 MMILTMGAIFSGFLLQFIIPSFNESLILPL 452
Cdd:PRK08676 453 IVIILALVLALGVYFPPGLADFLDQIVKEL 482
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
196-390 |
4.46e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 62.15 E-value: 4.46e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 196 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGVFLLIRFYPFISSYSSFFWWSML-FSSLTLLMAGIGANFEFDLKKIIAL 273
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLGGNAPLWWGVALLvLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 274 STLSQLGVMMLS-------ISLKMPML-------ALFHLYTHAMFKALLFLCAGAIIYNNSHnQDIRTMGNIWKQMPLTI 339
Cdd:PRK08042 276 HTLENIGIILLGlgagvtgIALEQPALialglvgGLYHLLNHSLFKSVLFLGAGSVWFRTGH-RDIEKLGGIGKKMPVIS 354
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1199893924 340 SCLNTANLALCGAPFMAGFYSKDLILETMLS-SNSNMII--LLLVFFATGLTAT 390
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFKlSNSGAFVarLLGPLLAVGLAIT 408
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
34-381 |
3.48e-09 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 59.36 E-value: 3.48e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 34 WLLMEWDIITTSTATLTFpvILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFL-ARFIWLVMLFVMSMNLLVFIPNMAS 112
Cdd:COG1007 49 LLLLALGGGTGTAFGGMF--VVDGFALFFKLLILLAALLVLLLSRDYLERRGLLrGEFYALLLFATLGMMLMASANDLLT 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 113 LLIGWDGLGIVSFALV-IYYENPKSLAAGM----ITALANRI---GdVMLIIAITLSIN---QGFWSSNHFIFHPFSWVV 181
Cdd:COG1007 127 LFLGLELLSLSLYVLVaFRRDDRRSSEAALkyflLGALSSGFllyG-ISLLYGATGSLNlagIAAALAAGGANSPLLLLG 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 182 MAAITVAAMTKSAQIPFSSWLP-AAMAAPTPVSALVhsSTLV-TAGVFLLIRF--YPFISSYSSFFWWSMLFSSLTLLMA 257
Cdd:COG1007 206 LVLVLAGLAFKLSAVPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLlvEAFPGLAADWQLLLAVLAVLSMTVG 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 258 GIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPM---LALFHLYTHAMFKALLFLCAGAIIYNNSHNQDIRTMGNIWKQ 334
Cdd:COG1007 284 NLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARR 363
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1199893924 335 MPLTISCLNTANLALCGAPFMAGFYSKDLILETMLssNSNMIILLLV 381
Cdd:COG1007 364 SPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAV--EAGLYWLAVI 408
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
223-395 |
1.09e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 57.73 E-value: 1.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 223 TAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPM---LALFHLY 299
Cdd:PRK06277 246 VALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLgivAGIFHAI 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 300 THAMFKALLFLCAGaIIYNNSHNQDIRTMGNIWKQMPLTISCLNTANLALCGAPFMAGFYSKDLILETMLSSNSN----- 374
Cdd:PRK06277 326 NHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPelaii 404
|
170 180
....*....|....*....|.
gi 1199893924 375 MIILLLVFFATGLTATYSIRL 395
Cdd:PRK06277 405 MIIVSIGTFVSMMKAFYLIYL 425
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
180-391 |
5.17e-08 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 55.48 E-value: 5.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 180 VVMAAITVAAMTKSAQIPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVFLLIRF--YPFISSYSSFFWWSMLFSSLTLLM 256
Cdd:PRK06473 206 LLLAPILVGFGIKIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFgvGLFPEAWVYLAPWLATWAVVSVLY 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 257 AGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPM---LALFHLYTHAMFKALLFLCAGaIIYNNSHNQDI---RTMGN 330
Cdd:PRK06473 285 GASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLsilAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVdvlRGLLN 363
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1199893924 331 IWKQMPLTISCLNTANLALCGAPFMAGFYSKDLILETmlSSNSNMIILLLVFFATGLTATY 391
Cdd:PRK06473 364 PERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRG--SFPIFPVQTLLCMIGTGLTAVY 422
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
196-434 |
3.17e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 46.63 E-value: 3.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 196 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRF--YPFISSYSSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIAL 273
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFglQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAY 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 274 STLSQLGVMMLSISLKMPML---ALFHLYTHAMFKALLFLCAGaIIYNNSHNQDIRTMG---NIWKQMPLTISCLNTANL 347
Cdd:PRK07363 302 SSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNglmNPIRGLPLTSALLVLAGM 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 348 ALCGAPFMAGFYSKDLILETMLSSNSnmIILLLVFFATGLTATY-SIRLSILVLWKQNNHLPFssFSDEYWQMTSPMMIL 426
Cdd:PRK07363 381 ASAGIPGLVGFVAEFIVFQGSFSTFP--IPTLLCIVASGLTAVYfVILLNRTCFGRLDNKLAY--YPKVLWSEKIPALIL 456
|
....*...
gi 1199893924 427 TMGAIFSG 434
Cdd:PRK07363 457 TALILFLG 464
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
183-360 |
5.49e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 45.79 E-value: 5.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 183 AAITVAAMTKSAQIPFSSWLPAAMA-APTPVSALVhsstlvtAGVFLLIRFYPFISSYSSFFWWSMLFSSLTLLMAGI-- 259
Cdd:PRK12561 189 AGFLIAFGVKLPIFPLHTWLPDAHGeASAPVSMIL-------AGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILGVvn 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 260 ---GANFEF---DLKKIIALSTLSQLGVMMLSIS----LKMPMlALFHLYTHAMFKALLFLCAGaIIYNNSHNQDIRTMG 329
Cdd:PRK12561 262 iiyGALNAFaqdNVKRRLAYSSVSHMGFVLLGIAaftdLGISG-AMLQMISHGLIAAALFFLTG-VTYERTHTLSIPNMG 339
|
170 180 190
....*....|....*....|....*....|.
gi 1199893924 330 NIWKQMPLTISCLNTANLALCGAPFMAGFYS 360
Cdd:PRK12561 340 GLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
42-90 |
7.27e-05 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 40.49 E-value: 7.27e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 1199893924 42 ITTSTATLTFPVILDPLSLSFSNVVCLISASVLMFSTKYMDEEKFLARF 90
Cdd:pfam00662 2 LSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
185-372 |
1.90e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 43.66 E-value: 1.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 185 ITVAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLirfypFISSYSSFFWWSMLFSSLTLLMAGIGANFE 264
Cdd:MTH00112 98 LTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-----LMTSNSLNPTLLLTLAILSTLIGGWGGLNQ 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 265 FDLKKIIALSTLSQLGVMMLSISLkMPMLALFHLYTHAMFKALLFLcagaiIYNNSHNQDIRTMGNIWKQMPLTISCLNT 344
Cdd:MTH00112 173 TQLRKIMAFSSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPTLNTTLML 246
|
170 180
....*....|....*....|....*...
gi 1199893924 345 ANLALCGAPFMAGFYSKDLILETMLSSN 372
Cdd:MTH00112 247 TLLSLAGLPPLTGFMPKWLILQELTKQN 274
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
62-313 |
8.62e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.08 E-value: 8.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 62 FSNVVCLISASVLMFSTKYMDEEKFLARfiwLVMLFVMSMNLLVFIPNMASLLIGWDGLGIVSFALVIYYENPKSLAagm 141
Cdd:PRK06459 49 FSIISTIVWILASLYSIEYDHYGKWLSS---LYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKRPA--- 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 142 ITALANRIGDVMLIIAITLSinqGFWSSNHFIFHPF-SWVVMAAITVAAMTKSAQIPF--SSWLPAAMA-APTPVSAlVH 217
Cdd:PRK06459 123 FVFMAFGELSTVLILAGFAW---AFIISGTTNFSYLpSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGnAPSNFSA-IL 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 218 SSTLVTAGVFLLIRFYPFISSYSSFFW--WSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMP---- 291
Cdd:PRK06459 199 SATMTLMGVYGILKMTILTQTIPIGYFglTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLYMVtkql 278
|
250 260 270
....*....|....*....|....*....|.
gi 1199893924 292 ---------MLALFHLYTHAMFKALLFLCAG 313
Cdd:PRK06459 279 itsiehfslITVILYSFAHSVAKTGLFLSSG 309
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
72-381 |
1.09e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 41.30 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 72 SVLMFSTKYMDEEKFLARFIWLVMLFVMSMNLLVFIPNMASlligwdglgivsfalviyYENPKSLAAGMITALANRIGD 151
Cdd:MTH00011 8 MFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTS------------------SKMNQESEAAVKYFLAQALGS 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 152 VMLIIAITLSinqgfWSSNHFIFHPFSWVVMAAItvaaMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIR 231
Cdd:MTH00011 70 GLLLLGMTMM-----WSFPSLLKNITALMLLVSL----MLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFF 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 232 FYPfissySSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLC 311
Cdd:MTH00011 141 FTS-----HNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLF 215
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 312 AGAIIYNNSHNQDIRTMGniwkqmPLTISCLNTANLALCGAPFMAGFYSKDLILETMLSSNSNMIILLLV 381
Cdd:MTH00011 216 AYLNAFSTKFNSKISSMS------QTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLI 279
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
168-392 |
2.88e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 40.29 E-value: 2.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 168 SSNHFIFHPFSWVVMAAITVAAMTKSAQIPFSSWLPAA-MAAPTPVSALVHSSTLVTAGVFLLIRFYPFISSYSSFFWWS 246
Cdd:MTH00226 219 SCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPA 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 247 MLFSSLTLLMAG-IGANFEFDLKKIIALSTLSQLGvmMLSISLKMPML-----ALFHLYTHAMFKALLFLCAgAIIYNNS 320
Cdd:MTH00226 299 VIAMGIVGIVYGsFATCRQIDVKRLVAYSSVAHMG--LVSITLVTHDIigltgSIFIMLAHGIVSSLLFILV-TILYDRH 375
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1199893924 321 HNQDIRTMGNIWKQMPLTISCLNTANLALCGAPFMAGFYSKdlILETMLSSNSNMIILLLVFFATGLTATYS 392
Cdd:MTH00226 376 HTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGE--YLSILSSFNWNPIIGVFVCSGVILSAVYS 445
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
194-448 |
3.78e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 40.10 E-value: 3.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 194 AQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYpfissysSFFWWSMLFSSLTLLMAGIGANFEFDLKKIIAL 273
Cdd:PRK12664 159 ACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLFF-------SGEEILLFLGIITAIYGIIFASLEQNIRRLLCY 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 274 STLSQLGVMMLSISLKMPM-----LALFHLYTHAMFKALLFLCAGAIIyNNSHNQDIRTMGNIWKqMPLTISCLNTANLA 348
Cdd:PRK12664 232 NVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVI-NRTRKFNLNRVGGLFK-MSLEAMCCIIAILN 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 349 LCGAPFMAGFYSKDLILETMLSSNSNMIILLLVFFATGLTATYSIRLSILVLWKQNNHLPFSSFSDEYWQMTSPMMILTM 428
Cdd:PRK12664 310 MGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFLICSLLLFASVGLKFFWYAFISKSKSKPEAEKVYIGSKLSMIILVL 389
|
250 260
....*....|....*....|....
gi 1199893924 429 GAIFSG----FLLQFIIPSFNESL 448
Cdd:PRK12664 390 ICVVLGmfnsYLLFYNLPSFVYTL 413
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
92-440 |
7.88e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 38.50 E-value: 7.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 92 WLVMLFVMSMNLLVFIPnmaslligwdglgivsfaLVIYYENPKSLAAGMITALANRIGDVMLIIAITLSInqgfwsSNH 171
Cdd:MTH00197 20 WFLVWIGMELNLIGFIP------------------LLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSF------SNL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 172 FIFHPFSWVVMAAItvaaMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYpfissysSFFWWSMLFSS 251
Cdd:MTH00197 76 YLSLLSVVLVILGL----LLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNS-------SSFMGLLICSV 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 252 LTLLMAGIGANFEFDLKKIIALSTLSQLGVMMLSISLKMPMLALFHLYTHAMFKALLFLCAGAIIYNnshnqdIRTMGNI 331
Cdd:MTH00197 145 LSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSS------LNQQYSN 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 332 WKQMPLTISCLNTANLALCGAPFMAGFYSKDLILETMLSSNSNMIILLLVfFATGLTATYSIRLSILVLWKQNNHLPFSS 411
Cdd:MTH00197 219 PESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLI-LSTCFSLYYYLSLAYKSLILSNWMINFLM 297
|
330 340
....*....|....*....|....*....
gi 1199893924 412 FSDEYWQMtspMMILTMGAIFSGFLLQFI 440
Cdd:MTH00197 298 KINLLYSG---LFILLMMMLPLLMIFTMI 323
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
192-395 |
8.66e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 38.88 E-value: 8.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 192 KSAQIPFSSWLPAAMaaptpVSALVHSSTLVtAGVFLLIRFYPFI-SSYSSFFWWSMLFSSLTL---LMAGIGANF---- 263
Cdd:MTH00217 219 KIPKIPFHIWLPQAH-----VEAPVAGSVIL-AGVLLKLGGYGFIrFSWPLLPEASEYFSPLIQtlsLLAIIYGSLttcr 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1199893924 264 EFDLKKIIALSTLSQLGVMMLSI---SLKMPMLALFHLYTHAMFKALLFLcAGAIIYNNSHNQDIRTMGNIWKQMPLTIS 340
Cdd:MTH00217 293 QVDLKRIIAYSSVAHMGLVTLGIfshTIQGLVAAIFLMLAHGLVSSALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGI 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1199893924 341 CLNTANLALCGAPFMAGFYSKDLILetMLSSNSNMIILLLVFFATGLTATYSIRL 395
Cdd:MTH00217 372 LMLLLVLANASIPLSCNFVGEFLSL--LAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| |
