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Conserved domains on  [gi|1252316710|ref|YP_009433701|]
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ATP synthase subunit 6 (mitochondrion) [Kluyveromyces marxianus DMKU3-1042]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 26-253 1.11e-40

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


:

Pssm-ID: 273458  Cd Length: 226  Bit Score: 139.65  E-value: 1.11e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  26 LDFSSLNFTTFSLYTVIVLFTIIGLNTLTTNNNKIIGSKWFVSQEAIYDTILNMVKGQIGGKLwGFYFPLVYTFFFFIFV 105
Cdd:TIGR01131   5 FDISPITLFSLTLLSLILLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKK-GKFFPLIFTLFLFILI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 106 SNLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVPGGTPLPLVPLLVLIELLSYFARAISLGLRLS 185
Cdd:TIGR01131  84 SNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLF 163

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1252316710 186 SNVLSGHLLLIILGGLLFNLMSISIITFVFgfipgIGLLAIVVLEFAISVIQAYVWAILTSSYLKDAL 253
Cdd:TIGR01131 164 ANISAGHLLLTLLSGLLFSLMSSAIFALLL-----LILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
 
Name Accession Description Interval E-value
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 26-253 1.11e-40

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 139.65  E-value: 1.11e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  26 LDFSSLNFTTFSLYTVIVLFTIIGLNTLTTNNNKIIGSKWFVSQEAIYDTILNMVKGQIGGKLwGFYFPLVYTFFFFIFV 105
Cdd:TIGR01131   5 FDISPITLFSLTLLSLILLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKK-GKFFPLIFTLFLFILI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 106 SNLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVPGGTPLPLVPLLVLIELLSYFARAISLGLRLS 185
Cdd:TIGR01131  84 SNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLF 163

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1252316710 186 SNVLSGHLLLIILGGLLFNLMSISIITFVFgfipgIGLLAIVVLEFAISVIQAYVWAILTSSYLKDAL 253
Cdd:TIGR01131 164 ANISAGHLLLTLLSGLLFSLMSSAIFALLL-----LILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_A pfam00119
ATP synthase A chain;
38-250 4.38e-35

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 124.91  E-value: 4.38e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  38 LYTVIVLFTIIGLNTLTTNN-NKIIGSKWFVSQEAIYDTILNMVKGQIGGKLWGFYFPLVYTFFFFIFVSNLISMI---P 113
Cdd:pfam00119   2 LMSLIVALILLLFLLLATRKtKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksP 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 114 YSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWV--FFSLFVPGgTPLPLVPLLVLIELLSYFARAISLGLRLSSNVLSG 191
Cdd:pfam00119  82 GGFTVTADINVTLALALIVFLLVHYYGIKKHGLGgyFKKLFVPP-VPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAG 160

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1252316710 192 HLLLIILGGLLFNLMSisiITFVFGFIPGIGLLAIVVLEFAISVIQAYVWAILTSSYLK 250
Cdd:pfam00119 161 HLLLLLLAGLIFALLS---AGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 11-256 7.34e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 119.73  E-value: 7.34e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  11 DQFEIRVLMGFTSPLLDFSsLNFTTFSLYTVIVLFTIiglnTLTTNNNKIIGSKWFVSQEAIYDTILNMVKGQIGGKLWG 90
Cdd:MTH00175    7 DQFNIIRLITIQAFLGDWL-VTFTNSSMMMVLAVIIF----WLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQK 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  91 fYFPLVYTFFFFIFVSNLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVPGGTPLPLVPLLVLIEL 170
Cdd:MTH00175   82 -YFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 171 LSYFARAISLGLRLSSNVLSGHLLLIILGGLLFNLMSISIItfVFGFIPGIGLLAIVVLEFAISVIQAYVWAILTSSYLK 250
Cdd:MTH00175  161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLI--ILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLG 238


                  ....*.
gi 1252316710 251 DALYLH 256
Cdd:MTH00175  239 DTIALH 244
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 92-250 4.20e-30

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 110.18  E-value: 4.20e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  92 YFPLVYTFFFFIFVSNLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVPGGTPLPLVPLLVLIELL 171
Cdd:cd00310     4 YLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELI 83

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1252316710 172 SYFARAISLGLRLSSNVLSGHLLLIILGGLLFNLMSIsiitfvFGFIPGIGLLAIVVLEFAISVIQAYVWAILTSSYLK 250
Cdd:cd00310    84 SELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSS------VGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 38-253 7.59e-27

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 103.23  E-value: 7.59e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  38 LYTVIVLFTIIGLNTLTTNNNKIIGSKWFVSQEAIYDTILNMVKGQIGGKlWGFYFPLVYTFFFFIFVSNLISMIPYSFA 117
Cdd:COG0356     4 LMSWLAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKK-GRKFAPLLLTLFLFILVSNLLGLIPGLFP 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 118 LSAHLIFIVSLSSVVWLGATIIGLTKHGWVFF--SLFVPGgtPLPLVPLLVLIELLSYFARAISLGLRLSSNVLSGHlll 195
Cdd:COG0356    83 PTADINVTLALALIVFVLVHYYGIKKKGLGGYlkHLFFPP--FPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGH--- 157

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1252316710 196 iilggLLFNLMSISIITFVFGFIPGIGLLAIVVLEFAISVIQAYVWAILTSSYLKDAL 253
Cdd:COG0356   158 -----IILLLLAGLAPFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAV 210
 
Name Accession Description Interval E-value
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 26-253 1.11e-40

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 139.65  E-value: 1.11e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  26 LDFSSLNFTTFSLYTVIVLFTIIGLNTLTTNNNKIIGSKWFVSQEAIYDTILNMVKGQIGGKLwGFYFPLVYTFFFFIFV 105
Cdd:TIGR01131   5 FDISPITLFSLTLLSLILLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKK-GKFFPLIFTLFLFILI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 106 SNLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVPGGTPLPLVPLLVLIELLSYFARAISLGLRLS 185
Cdd:TIGR01131  84 SNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLF 163

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1252316710 186 SNVLSGHLLLIILGGLLFNLMSISIITFVFgfipgIGLLAIVVLEFAISVIQAYVWAILTSSYLKDAL 253
Cdd:TIGR01131 164 ANISAGHLLLTLLSGLLFSLMSSAIFALLL-----LILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_A pfam00119
ATP synthase A chain;
38-250 4.38e-35

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 124.91  E-value: 4.38e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  38 LYTVIVLFTIIGLNTLTTNN-NKIIGSKWFVSQEAIYDTILNMVKGQIGGKLWGFYFPLVYTFFFFIFVSNLISMI---P 113
Cdd:pfam00119   2 LMSLIVALILLLFLLLATRKtKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksP 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 114 YSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWV--FFSLFVPGgTPLPLVPLLVLIELLSYFARAISLGLRLSSNVLSG 191
Cdd:pfam00119  82 GGFTVTADINVTLALALIVFLLVHYYGIKKHGLGgyFKKLFVPP-VPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAG 160

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1252316710 192 HLLLIILGGLLFNLMSisiITFVFGFIPGIGLLAIVVLEFAISVIQAYVWAILTSSYLK 250
Cdd:pfam00119 161 HLLLLLLAGLIFALLS---AGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 11-256 7.34e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 119.73  E-value: 7.34e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  11 DQFEIRVLMGFTSPLLDFSsLNFTTFSLYTVIVLFTIiglnTLTTNNNKIIGSKWFVSQEAIYDTILNMVKGQIGGKLWG 90
Cdd:MTH00175    7 DQFNIIRLITIQAFLGDWL-VTFTNSSMMMVLAVIIF----WLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQK 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  91 fYFPLVYTFFFFIFVSNLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVPGGTPLPLVPLLVLIEL 170
Cdd:MTH00175   82 -YFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 171 LSYFARAISLGLRLSSNVLSGHLLLIILGGLLFNLMSISIItfVFGFIPGIGLLAIVVLEFAISVIQAYVWAILTSSYLK 250
Cdd:MTH00175  161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNGLI--ILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLG 238


                  ....*.
gi 1252316710 251 DALYLH 256
Cdd:MTH00175  239 DTIALH 244
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 92-250 4.20e-30

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 110.18  E-value: 4.20e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  92 YFPLVYTFFFFIFVSNLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVPGGTPLPLVPLLVLIELL 171
Cdd:cd00310     4 YLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELI 83

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1252316710 172 SYFARAISLGLRLSSNVLSGHLLLIILGGLLFNLMSIsiitfvFGFIPGIGLLAIVVLEFAISVIQAYVWAILTSSYLK 250
Cdd:cd00310    84 SELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSS------VGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 33-256 6.46e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 109.36  E-value: 6.46e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  33 FTTFSLYTVIVLFTIIGLntltTNNNKIIGSKWFVSQEAIYDTILNMVKGQIGGKLWgFYFPLVYTFFFFIFVSNLISMI 112
Cdd:MTH00172   17 LTNSSIMMILVIIVVLLL----FKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGL-KYFPFIISLFFFIVFLNLLGLF 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 113 PYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVPGGTPLPLVPLLVLIELLSYFARAISLGLRLSSNVLSGH 192
Cdd:MTH00172   92 PYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGH 171

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1252316710 193 LLLIILGGLLFNLMSISiitFVFGFIPGIGLLAIVVLEFAISVIQAYVWAILTSSYLKDALYLH 256
Cdd:MTH00172  172 LLFAILAGFGFNMLCAS---GFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADTIVLH 232
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 38-253 7.59e-27

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 103.23  E-value: 7.59e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  38 LYTVIVLFTIIGLNTLTTNNNKIIGSKWFVSQEAIYDTILNMVKGQIGGKlWGFYFPLVYTFFFFIFVSNLISMIPYSFA 117
Cdd:COG0356     4 LMSWLAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKK-GRKFAPLLLTLFLFILVSNLLGLIPGLFP 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 118 LSAHLIFIVSLSSVVWLGATIIGLTKHGWVFF--SLFVPGgtPLPLVPLLVLIELLSYFARAISLGLRLSSNVLSGHlll 195
Cdd:COG0356    83 PTADINVTLALALIVFVLVHYYGIKKKGLGGYlkHLFFPP--FPWLAPLMLPIEIISELARPLSLSLRLFGNMFAGH--- 157

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1252316710 196 iilggLLFNLMSISIITFVFGFIPGIGLLAIVVLEFAISVIQAYVWAILTSSYLKDAL 253
Cdd:COG0356   158 -----IILLLLAGLAPFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAV 210
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 27-256 9.09e-27

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 103.34  E-value: 9.09e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  27 DFSSLNFTTFSLYTVIVLFTIIGLNTLTTNNNKIIGSKWFVSQEAIYDTILNMVKGQIGGKLwGFYFPLVYTFFFFIFVS 106
Cdd:PRK05815    8 GFGGFNFDSLLLSVLLGVLILLLFALVATRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKG-KKFAPLAFTLFLFILLM 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 107 NLISMIP-YSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWV-FFSLFVPGGTPLPLVpllvlIELLSYFARAISLGLRL 184
Cdd:PRK05815   87 NLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGIKKKGLGgYLKEFYLQPHPLLLP-----IEIISEFSRPISLSLRL 161

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1252316710 185 SSNVLSGHLLLIIlggllfnLMSISIITFVFGFIPGIGLLAIVVLEFAISVIQAYVWAILTSSYLKDALYLH 256
Cdd:PRK05815  162 FGNMLAGELILAL-------IALLGGAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISMAVEEE 226
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 28-253 1.11e-21

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 90.01  E-value: 1.11e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  28 FSSLNFTTFSLYTVIVLFTIIGLNTLTTNNNKIIGSKWFVSQEAIYDTILNMVKGQIGGKLWGFYFpLVYTFFFFIFVSN 107
Cdd:MTH00179    6 FDQFESPSLLGIPLLALALLLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAV-LFLSLMLFLLTLN 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 108 LISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVPGGTPLPLVPLLVLIELLSYFARAISLGLRLSSN 187
Cdd:MTH00179   85 LLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRLTAN 164

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1252316710 188 VLSGHLLLIILGGLLFNLMSISIitfVFGFIPGIGLLAIVVLEFAISVIQAYVWAILTSSYLKDAL 253
Cdd:MTH00179  165 ITAGHLLMHLISSAVFVLMNFMG---MVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENL 227
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 27-256 7.00e-20

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 85.76  E-value: 7.00e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  27 DFSSLNFTTFSLYTVIVLFTIIGLntlTTNNNKIIGSKWFVSQEAIYDTILNMVKGQIGGKlWGFYFPLVYTFFFFIFVS 106
Cdd:MTH00174   29 EFFCFTNTFFMMSFAVFLFYTIGA---KGNNNTLVPNRILVGLELIYSHFYTVLKDNLGNK-GGNYLAFVLSLFILILFG 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 107 NLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVPGGTPLPLVPLLVLIELLSYFARAISLGLRLSS 186
Cdd:MTH00174  105 NGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAA 184

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 187 NVLSGHLLLIILGGLLFNLMSISIItfVFGFIPGIGLLAIVVLEFAISVIQAYVWAILTSSYLKDALYLH 256
Cdd:MTH00174  185 NISSGHLLFSIIASFAWKMINTGIL--IGSFVPFAILIFVTILEMAVAIIQAYVFTLLTIVYLRDTVELH 252
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 60-248 3.78e-18

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 80.21  E-value: 3.78e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  60 IIGSKWFVSQEAIYDTILNMVKGQIGGKLWGFYFpLVYTFFFFIFVSNLISMIPYSFALSAHLIFIVSLSSVVWLGATII 139
Cdd:MTH00157   37 LIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTL-IFISLFSFILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLF 115

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 140 GLTKHGWVFFSLFVPGGTPLPLVPLLVLIELLSYFARAISLGLRLSSNVLSGHLLLIILGGLLFNLMSISIITFVFgfip 219
Cdd:MTH00157  116 GWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLSSMILSILIL---- 191

                         170       180
                  ....*....|....*....|....*....
gi 1252316710 220 giGLLAIVVLEFAISVIQAYVWAILTSSY 248
Cdd:MTH00157  192 --IQILLLILESAVAIIQSYVFSVLSTLY 218
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 75-251 3.56e-16

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 75.07  E-value: 3.56e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  75 TILNMVKGQIGGKLWGFYFPLVYTFFFFIFVSNLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVP 154
Cdd:MTH00176   54 TFLPEMILRSNGSYILGSASIIISLFILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVP 133

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 155 GGTPLPLVPLLVLIELLSYFARAISLGLRLSSNVLSGHLLLIILGGLLFNLMSISIITFVFGFIPGIGLLaivVLEFAIS 234
Cdd:MTH00176  134 QGTPPLLNPFLVLIELVSLLIRPLTLAVRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLIVQILYF---MFEIAVC 210

                         170
                  ....*....|....*..
gi 1252316710 235 VIQAYVWAILTSSYLKD 251
Cdd:MTH00176  211 MIQAYVFTLLLSLYLDE 227
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 94-249 2.24e-15

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 73.08  E-value: 2.24e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  94 PLVYTFFFFIFVSNLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVPGGTPLPLVPLLVLIELLSY 173
Cdd:MTH00035   74 GLLTTVFILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSL 153

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1252316710 174 FARAISLGLRLSSNVLSGHLLLIILGGLLFNLMSISIItfvfGFIPGIGLLAIVVLEFAISVIQAYVWAILTSSYL 249
Cdd:MTH00035  154 FAQPIALGLRLAANLTAGHLLIFLLSTAIWELSNSPLI----SIITLIIFFLLFILEIGVACIQAYVFTALVHFYL 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 98-251 2.54e-15

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 72.68  E-value: 2.54e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  98 TFFFFIFVSNLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVPGGTPLPLVPLLVLIELLSYFARA 177
Cdd:MTH00101   74 SLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQP 153

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1252316710 178 ISLGLRLSSNVLSGHLLLIILGGLLFNLMSISIITFVFGFIPgigLLAIVVLEFAISVIQAYVWAILTSSYLKD 251
Cdd:MTH00101  154 MALAVRLTANITAGHLLIHLIGGATLALMSISTTTALITFII---LILLTILEFAVALIQAYVFTLLVSLYLHD 224
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 98-249 6.58e-13

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 66.00  E-value: 6.58e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  98 TFFFFIFVSNLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVPGGTPLPLVPLLVLIELLSYFARA 177
Cdd:MTH00120   75 SLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRP 154

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1252316710 178 ISLGLRLSSNVLSGHLLLIILGGLLFNLMSISIITFVfgfIPGIGLLAIVVLEFAISVIQAYVWAILTSSYL 249
Cdd:MTH00120  155 LALGVRLTANLTAGHLLIQLISTATLNLLPTMPTLSL---LTLIILLLLTILELAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 102-251 1.11e-12

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 65.37  E-value: 1.11e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 102 FIFVSNLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVPGGTPLPLVPLLVLIELLSYFARAISLG 181
Cdd:MTH00073   79 FLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALG 158

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 182 LRLSSNVLSGHLLLIILGGLLFNLMSISIITFVFGFIPgigLLAIVVLEFAISVIQAYVWAILTSSYLKD 251
Cdd:MTH00073  159 VRLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIV---LFLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 94-251 1.38e-12

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 65.14  E-value: 1.38e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  94 PLVYTFFFFIFVSNLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVPGGTPLPLVPLLVLIELLSY 173
Cdd:MTH00005   75 SLISALFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISI 154

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1252316710 174 FARAISLGLRLSSNVLSGHLLLIILGGLLFNLMSISIITFVFGFIPGIGLlaiVVLEFAISVIQAYVWAILTSSYLKD 251
Cdd:MTH00005  155 LVRPITLSFRLAANMSAGHIVLSLIGIYAASALFSSISSTILLILTQMGY---ILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 28-248 3.20e-11

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 61.42  E-value: 3.20e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  28 FSSLNFTTFSLYTVIVLFTIIGLnTLTTNNNKIIGSKWFVSQEAIYDTILNMVKGQIGGKLWGFyfPLVYTF-FFFIFVS 106
Cdd:MTH00173    9 FDDHNSSFSSLSFLMWLLSLMSL-FFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGF--SLLLSSlFLFLISL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 107 NLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVPGGTPLPLVPLLVLIELLSYFARAISLGLRLSS 186
Cdd:MTH00173   86 NLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVRLLA 165

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1252316710 187 NVLSGHLLLIILGGLLFNLMSISIITFVFGFIPGIGLlaIVVLEFAISVIQAYVWAILTSSY 248
Cdd:MTH00173  166 NISAGHIVLTLIGNYLSSSLFSSSVVSLLLVLLIQVG--YFIFEVAVMLIQAYIFTLLIKLY 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 84-249 4.99e-11

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 60.66  E-value: 4.99e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  84 IGGKLWGfyfPLVYTFFFFIFVSNLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFFSLFVPGGTPLPLVP 163
Cdd:MTH00132   64 VGGHKWA---LLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIP 140

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 164 LLVLIELLSYFARAISLGLRLSSNVLSGHLLLIILGGLLFNLMSI----SIITFVFgfipgigLLAIVVLEFAISVIQAY 239
Cdd:MTH00132  141 VLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLmptvAILTATL-------LFLLTLLEVAVAMIQAY 213

                         170
                  ....*....|
gi 1252316710 240 VWAILTSSYL 249
Cdd:MTH00132  214 VFVLLLSLYL 223
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 70-246 9.40e-08

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 52.05  E-value: 9.40e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  70 EAIYDTILNMVKGQIGGKLWGFYFPLVYTFFFFIFVSNLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWVFF 149
Cdd:PRK13419  148 EALVEFIRLDVAKSNIGHGYEKFLPYLLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKAHGIKGY 227

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 150 SLFVPGGTPLPLVPLLVLIELLSYFARAISLGLRLSSNVLSGHLLLIILGGLLFNLMsiSIITFVFGFIPGIglLAIVVL 229
Cdd:PRK13419  228 LAHLTGGTHWSLWIIMIPIEFIGLFTKPFALTVRLFANMTAGHIVILSLIFISFILK--SYIVAVAVSVPFA--IFIYLL 303

                         170
                  ....*....|....*..
gi 1252316710 230 EFAISVIQAYVWAILTS 246
Cdd:PRK13419  304 ELFVAFLQAYIFTMLSA 320
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 21-256 6.09e-05

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 43.19  E-value: 6.09e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  21 FTSPLLDFSSLNFTTFSLYTVIVLFTIIGLNTLTTNNNKIIGSKWFVSQEAIYDTILNMVKGQIGGKLwGFYFPLVYTFF 100
Cdd:PRK13420    4 LAHVLFHIGPLPITESVLTTWGIMIVLVLASWLTTRRLSLDPGRFQVALEGVVSTIEDAIKEVLPRHA-RLVLPFVGTLW 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 101 FFIFVSNLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHGWV--FFSLFVPggtplplVPLLVLIELLSYFARAI 178
Cdd:PRK13420   83 IFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGIRAEGLReyLKHYLSP-------SPFLLPFHLISEITRTL 155

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1252316710 179 SLGLRLSSNVLSGHllliilggllfnlMSISIITFVFGFIPGIGLLAIVVLEfaiSVIQAYVWAILTSSYLKDALYLH 256
Cdd:PRK13420  156 ALAVRLFGNIMSLE-------------LAALLVLLVAGFLVPVPILMLHIIE---ALVQAYIFGMLALIYIAGGIQAH 217
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 92-253 8.96e-05

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 42.38  E-value: 8.96e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710  92 YFPLVYTFFFFIFVSNLISMIPYSFALSAHLIFIVSLSSVVWLGATIIGLTKHG-WVFFSLFVpggtplPLVPLLVLIEL 170
Cdd:PRK13421   77 YRALIGTLFLFVLVANWSSLVPGVEPPTAHLETDAALALIVFLATIYYGVRARGvRGYLATFA------EPTWVMIPLNL 150

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1252316710 171 LSYFARAISLGLRLSSNVLSGhllliilggllfnLMSISIITFVFGFIPGIGLLAivvLEFAISVIQAYVWAILTSSYLK 250
Cdd:PRK13421  151 VEQLTRTFSLIVRLFGNVMSG-------------VFVIGIVLSLAGLLVPIPLMA---LDLLTGAVQAYIFAVLAMVFIG 214


                  ...
gi 1252316710 251 DAL 253
Cdd:PRK13421  215 AAV 217
atpI CHL00046
ATP synthase CF0 A subunit
 42-107 3.66e-04

ATP synthase CF0 A subunit


Pssm-ID: 176987  Cd Length: 228  Bit Score: 40.69  E-value: 3.66e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1252316710  42 IVLFTIIGLNTLTTNNNKIIGSKWFVSQEAIYDTILNMVKGQIGGKLWGFYFPLVYTFFFFIFVSN 107
Cdd:CHL00046   31 VVIAILLGSALLATRNLQTIPTGGQNFFEYVLEFIRDLAKTQIGEEEYRPWVPFIGTMFLFIFVSN 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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