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Conserved domains on  [gi|1535790704|ref|YP_009545489|]
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NADH dehydrogenase subunit 5 (mitochondrion) [Montipora efflorescens]

Protein Classification

NADH dehydrogenase subunit 5( domain architecture ID 11475871)

NADH dehydrogenase subunit 5 (ND5/NADH5) is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain; the immediate electron acceptor for the enzyme is believed to be ubiquinone

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
1-610 0e+00

NADH dehydrogenase subunit 5; Reviewed


:

Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 1058.91  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704   1 MYICVLFLLVVGALGAGVGGRKLGEKGAGLLTSSCLIISLSWSVLIFYEIILSYSTTHIKLWRWLDSDLLTVYFGLQFDS 80
Cdd:MTH00020    1 MYLLVLFLPLLGALLSGLFGRKIGEKGAGILTSSCLIISLSWSFLIFYEILFNSSTTYIKLWRWLDSDLLTVYFGLQFDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  81 LVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEA 160
Cdd:MTH00020   81 LVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 161 NKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVvSAPSSDITLICLLLFIGAVGKSAQLGLHTWLPDAMEG 240
Cdd:MTH00020  161 NKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVV-SAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEG 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 241 PTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGL 320
Cdd:MTH00020  240 PTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 321 SHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELA 400
Cdd:MTH00020  320 SHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELA 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 401 FEQYYLTFAYWLGSFSALLTTLYSIRLVYLTFLSNTNSRKAIFRRVHEGSWNLVLPLIILALGSLFVGYLAKEVVWSFQI 480
Cdd:MTH00020  400 FGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIWSFQI 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 481 TFPPIVPIFIKLLPVFFSLGGAALVIVLYFYSVHLFRVP-SFMGRMGYTFLYSAWQFNYVLNYFLAKRVWRGGHQISYRT 559
Cdd:MTH00020  480 TLPPIVPLSIKLLPVFLSLGGIGLVIILYFYSSKTFRVPfSFIGRNSYTFLGSAWQFNYILNYFLIKKIWKGGHLISYRT 559
                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1535790704 560 IDKGTLELVGPKGISNFLIGLTRGLSNLQAGQVFNYALVILIGVAIFIWGV 610
Cdd:MTH00020  560 IDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYALVILIGVAIFIWGL 610
 
Name Accession Description Interval E-value
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
1-610 0e+00

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 1058.91  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704   1 MYICVLFLLVVGALGAGVGGRKLGEKGAGLLTSSCLIISLSWSVLIFYEIILSYSTTHIKLWRWLDSDLLTVYFGLQFDS 80
Cdd:MTH00020    1 MYLLVLFLPLLGALLSGLFGRKIGEKGAGILTSSCLIISLSWSFLIFYEILFNSSTTYIKLWRWLDSDLLTVYFGLQFDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  81 LVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEA 160
Cdd:MTH00020   81 LVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 161 NKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVvSAPSSDITLICLLLFIGAVGKSAQLGLHTWLPDAMEG 240
Cdd:MTH00020  161 NKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVV-SAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEG 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 241 PTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGL 320
Cdd:MTH00020  240 PTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 321 SHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELA 400
Cdd:MTH00020  320 SHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELA 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 401 FEQYYLTFAYWLGSFSALLTTLYSIRLVYLTFLSNTNSRKAIFRRVHEGSWNLVLPLIILALGSLFVGYLAKEVVWSFQI 480
Cdd:MTH00020  400 FGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIWSFQI 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 481 TFPPIVPIFIKLLPVFFSLGGAALVIVLYFYSVHLFRVP-SFMGRMGYTFLYSAWQFNYVLNYFLAKRVWRGGHQISYRT 559
Cdd:MTH00020  480 TLPPIVPLSIKLLPVFLSLGGIGLVIILYFYSSKTFRVPfSFIGRNSYTFLGSAWQFNYILNYFLIKKIWKGGHLISYRT 559
                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1535790704 560 IDKGTLELVGPKGISNFLIGLTRGLSNLQAGQVFNYALVILIGVAIFIWGV 610
Cdd:MTH00020  560 IDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYALVILIGVAIFIWGL 610
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
21-608 0e+00

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 567.86  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  21 RKLGEKGAGLLTSSCLIISLSWSVLIFYEIIlsYSTTHIKLWRWLDSDLLTVYFGLQFDSLVAIMLLVITTISTLVHVFS 100
Cdd:COG1009    23 RRLGRRAAGWLAALAPLAAFVLSLLLFPAVL--GGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYS 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 101 TAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLIL 180
Cdd:COG1009   101 IGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLL 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 181 AMFGLWDRFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFL 260
Cdd:COG1009   181 GILLLGAIAGTLNFSELLAAAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYL 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 261 LIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALL 340
Cdd:COG1009   261 LARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALL 340
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 341 FLSAGSVIHALSdEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYL-TFAYWLGSFSALL 419
Cdd:COG1009   341 FLGAGSVIHATG-TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLgPLLLAVALLGAFL 419
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 420 TTLYSIRLVYLTFLsnTNSRKAIFRRVHEGSWNLVLPLIILALGSLFVGYLAKEVVWSFqITFPPIVP--------IFIK 491
Cdd:COG1009   420 TAFYSFRLFFLVFF--GKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLLEGL-LAPAAVLGgelhlahgLLLN 496
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 492 LLPVFFSLGGAALVIVLYFYSvhlfRVPSFMGRMG--YTFLYSAWQFNYVLNYFlakrVWRGGHQISYRTIDKGTLELVG 569
Cdd:COG1009   497 ALPLLLSLLGIALGYLLYLKR----PLPALAERLKplYRLLANKWYFDELYDAL----FVKPVRALARFLWFDRYVIDGI 568
                         570       580       590
                  ....*....|....*....|....*....|....*....
gi 1535790704 570 PKGISNFLIGLTRGLSNLQAGQVFNYALVILIGVAIFIW 608
Cdd:COG1009   569 VNGLARLTLFSGRLLRRLQTGYLQFYALTILLGVVVLLL 607
NDH_I_L TIGR01974
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ...
21-602 0e+00

proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273905 [Multi-domain]  Cd Length: 609  Bit Score: 566.53  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  21 RKLGEKGAGLLTSSCLIISLSWSVLIFYEIILSYS--TTHIKLWRWLDSDLLTVYFGLQFDSLVAIMLLVITTISTLVHV 98
Cdd:TIGR01974  22 RRIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEgeAFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHI 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  99 FSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGL 178
Cdd:TIGR01974 102 YSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGL 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 179 ILAMFGLWDRFGSLEFSSLFNMVVvSAPSSDITLICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGV 258
Cdd:TIGR01974 182 LLGIFLIFWYFGTLNFQEVFALAP-GAFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGV 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 259 FLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKA 338
Cdd:TIGR01974 261 YLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKA 340
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 339 LLFLSAGSVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFAYWLGSFSAL 418
Cdd:TIGR01974 341 LLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAF 420
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 419 LTTLYSIRLVYLTFlsNTNSRKAIFRRVHEGSWNLVLPLIILALGSLFVGYLAKEVVWSFQITFPPI---------VPIF 489
Cdd:TIGR01974 421 LTAFYSFRLIFMVF--HGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLKGVLPTSaepalehhhVPAL 498
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 490 IKLLPVFFSLGGAALVIVLYFYSVHLFRVPSFMGRMGYTFLYSAWQFNYVLNYFLAKrvwrGGHQIS---YRTIDKGTLE 566
Cdd:TIGR01974 499 EIWSPTAVAILGILLAYLLYLGNPTLPAKIAQRHSGLYRLLLNKWYFDELYDKVFVK----PYLFLGkllWKDPDDKIID 574
                         570       580       590
                  ....*....|....*....|....*....|....*.
gi 1535790704 567 LVGPkGISNFLIGLTRGLSNLQAGQVFNYALVILIG 602
Cdd:TIGR01974 575 GFGP-GIARLVGAISKRLRKSQTGYLRWYAASMVVG 609
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
130-409 6.74e-62

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 206.78  E-value: 6.74e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 130 SDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSD 209
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 210 ITLICLLLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFLLIRSSPFFEQA-PLALMTVTIVGSLTVL 287
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSsPFIQQILLILAIISML 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 288 FAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSH---YSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDIRKMGGLI 364
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTiygIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1535790704 365 KLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFA 409
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLV 284
 
Name Accession Description Interval E-value
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
1-610 0e+00

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 1058.91  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704   1 MYICVLFLLVVGALGAGVGGRKLGEKGAGLLTSSCLIISLSWSVLIFYEIILSYSTTHIKLWRWLDSDLLTVYFGLQFDS 80
Cdd:MTH00020    1 MYLLVLFLPLLGALLSGLFGRKIGEKGAGILTSSCLIISLSWSFLIFYEILFNSSTTYIKLWRWLDSDLLTVYFGLQFDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  81 LVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEA 160
Cdd:MTH00020   81 LVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 161 NKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVvSAPSSDITLICLLLFIGAVGKSAQLGLHTWLPDAMEG 240
Cdd:MTH00020  161 NKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVV-SAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEG 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 241 PTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGL 320
Cdd:MTH00020  240 PTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 321 SHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELA 400
Cdd:MTH00020  320 SHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELA 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 401 FEQYYLTFAYWLGSFSALLTTLYSIRLVYLTFLSNTNSRKAIFRRVHEGSWNLVLPLIILALGSLFVGYLAKEVVWSFQI 480
Cdd:MTH00020  400 FGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIWSFQI 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 481 TFPPIVPIFIKLLPVFFSLGGAALVIVLYFYSVHLFRVP-SFMGRMGYTFLYSAWQFNYVLNYFLAKRVWRGGHQISYRT 559
Cdd:MTH00020  480 TLPPIVPLSIKLLPVFLSLGGIGLVIILYFYSSKTFRVPfSFIGRNSYTFLGSAWQFNYILNYFLIKKIWKGGHLISYRT 559
                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1535790704 560 IDKGTLELVGPKGISNFLIGLTRGLSNLQAGQVFNYALVILIGVAIFIWGV 610
Cdd:MTH00020  560 IDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYALVILIGVAIFIWGL 610
ND5 MTH00210
NADH dehydrogenase subunit 5; Provisional
1-610 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177253 [Multi-domain]  Cd Length: 616  Bit Score: 915.94  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704   1 MYICVLFLLVVGALGAGVGGRKLGEKGAGLLTSSCLIISLSWSVLIFYEIILSYSTTHIKLWRWLDSDLLTVYFGLQFDS 80
Cdd:MTH00210    1 MYILVLFLPLLSAIISGLFGRKIGTKGAGILTSSCIVISAIVSCCIFYETTLNGSATYIKLWRWFDSELLTTYFGLQFDS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  81 LVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEA 160
Cdd:MTH00210   81 LTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 161 NKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGAVGKSAQLGLHTWLPDAMEG 240
Cdd:MTH00210  161 NKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 241 PTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGL 320
Cdd:MTH00210  241 PTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGI 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 321 SHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELA 400
Cdd:MTH00210  321 SNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELT 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 401 FEQYYLTFAYWLGSFSALLTTLYSIRLVYLTFLSNTNSRKAIFRRVHEGSWNLVLPLIILALGSLFVGYLAKEVVWSFqi 480
Cdd:MTH00210  401 YDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHESSWNITFPLLLLAFGSIFVGYLGKEVVLSN-- 478
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 481 TFPPIVPIFIKLLPVFFSLGGAALVIVLYFYSVHLF-----RVPSFMGRMGYTFLYSAWQFNYVLNYFLAKRVWRGGHQI 555
Cdd:MTH00210  479 VIPPIVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIkisrrGVSIRLYHVIYTFLNSAWQFNYVINHFIVKNIWKFGHLI 558
                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1535790704 556 SYRTIDKGTLELVGPKGISNFLIGLTRGLSNLQAGQVFNYALVILIGVAIFIWGV 610
Cdd:MTH00210  559 TYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALIMIIFTTLFISGA 613
PRK06590 PRK06590
NADH:ubiquinone oxidoreductase subunit L; Reviewed
21-607 0e+00

NADH:ubiquinone oxidoreductase subunit L; Reviewed


Pssm-ID: 235836 [Multi-domain]  Cd Length: 624  Bit Score: 630.65  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  21 RKLGEKGAGLLTSSCLIISLSWSVLIFYEIILSYSTT-HIKLWRWLDSDLLTVYFGLQFDSLVAIMLLVITTISTLVHVF 99
Cdd:PRK06590   24 RRIGEKWAHLVGTGLVGLSALLSLVVFFDFLLGGGRAfSQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIY 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 100 STAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLI 179
Cdd:PRK06590  104 SIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLA 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 180 LAMFGLWDRFGSLEFSSLFNMVVV--SAPSSDITLICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAG 257
Cdd:PRK06590  184 LGIFLLFAEFGSLNYDEVFAAAPQffGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAG 263
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 258 VFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFK 337
Cdd:PRK06590  264 VYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFK 343
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 338 ALLFLSAGSVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLtFAYWLGSFSA 417
Cdd:PRK06590  344 ALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHI-NLFVAGLVGA 422
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 418 LLTTLYSIRLVYLTFlsnTNSRKAIFRRVHEGSWNLVLPLIILALGSLFVGYLAKEVVWSF--------QITFPPIVPIF 489
Cdd:PRK06590  423 FLTAFYSFRLIFLVF---HGKEKEKIHHPHESPAVMTLPLIVLAVLSVFAGALIVPPFLGVlplttelaHGEAEHHLPVW 499
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 490 IKLLPVFFSLGGAALVIVLYFYSVHLFRVPSFMGRMGYTFLYSAWQFNYVLNYFLAkrvwRGGHQISY---RTIDKGTLE 566
Cdd:PRK06590  500 VALLPLVVALAGIALAWLLYLKKPTLPTSIAAPGRFLYTLLRNKYYFDELYEKVFV----KPGLALARllwKDGDDGIID 575
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|.
gi 1535790704 567 LVGpKGISNFLIGLTRGLSNLQAGQVFNYALVILIGVAIFI 607
Cdd:PRK06590  576 GLV-PNSARLVGGGSRVLRRLQTGYLRHYAASMLIGAVVLL 615
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
21-608 0e+00

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 567.86  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  21 RKLGEKGAGLLTSSCLIISLSWSVLIFYEIIlsYSTTHIKLWRWLDSDLLTVYFGLQFDSLVAIMLLVITTISTLVHVFS 100
Cdd:COG1009    23 RRLGRRAAGWLAALAPLAAFVLSLLLFPAVL--GGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYS 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 101 TAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLIL 180
Cdd:COG1009   101 IGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLL 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 181 AMFGLWDRFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFL 260
Cdd:COG1009   181 GILLLGAIAGTLNFSELLAAAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYL 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 261 LIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALL 340
Cdd:COG1009   261 LARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALL 340
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 341 FLSAGSVIHALSdEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYL-TFAYWLGSFSALL 419
Cdd:COG1009   341 FLGAGSVIHATG-TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLgPLLLAVALLGAFL 419
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 420 TTLYSIRLVYLTFLsnTNSRKAIFRRVHEGSWNLVLPLIILALGSLFVGYLAKEVVWSFqITFPPIVP--------IFIK 491
Cdd:COG1009   420 TAFYSFRLFFLVFF--GKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLLEGL-LAPAAVLGgelhlahgLLLN 496
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 492 LLPVFFSLGGAALVIVLYFYSvhlfRVPSFMGRMG--YTFLYSAWQFNYVLNYFlakrVWRGGHQISYRTIDKGTLELVG 569
Cdd:COG1009   497 ALPLLLSLLGIALGYLLYLKR----PLPALAERLKplYRLLANKWYFDELYDAL----FVKPVRALARFLWFDRYVIDGI 568
                         570       580       590
                  ....*....|....*....|....*....|....*....
gi 1535790704 570 PKGISNFLIGLTRGLSNLQAGQVFNYALVILIGVAIFIW 608
Cdd:COG1009   569 VNGLARLTLFSGRLLRRLQTGYLQFYALTILLGVVVLLL 607
NDH_I_L TIGR01974
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ...
21-602 0e+00

proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273905 [Multi-domain]  Cd Length: 609  Bit Score: 566.53  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  21 RKLGEKGAGLLTSSCLIISLSWSVLIFYEIILSYS--TTHIKLWRWLDSDLLTVYFGLQFDSLVAIMLLVITTISTLVHV 98
Cdd:TIGR01974  22 RRIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEgeAFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHI 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  99 FSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGL 178
Cdd:TIGR01974 102 YSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGL 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 179 ILAMFGLWDRFGSLEFSSLFNMVVvSAPSSDITLICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGV 258
Cdd:TIGR01974 182 LLGIFLIFWYFGTLNFQEVFALAP-GAFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGV 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 259 FLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKA 338
Cdd:TIGR01974 261 YLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKA 340
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 339 LLFLSAGSVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFAYWLGSFSAL 418
Cdd:TIGR01974 341 LLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAF 420
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 419 LTTLYSIRLVYLTFlsNTNSRKAIFRRVHEGSWNLVLPLIILALGSLFVGYLAKEVVWSFQITFPPI---------VPIF 489
Cdd:TIGR01974 421 LTAFYSFRLIFMVF--HGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLKGVLPTSaepalehhhVPAL 498
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 490 IKLLPVFFSLGGAALVIVLYFYSVHLFRVPSFMGRMGYTFLYSAWQFNYVLNYFLAKrvwrGGHQIS---YRTIDKGTLE 566
Cdd:TIGR01974 499 EIWSPTAVAILGILLAYLLYLGNPTLPAKIAQRHSGLYRLLLNKWYFDELYDKVFVK----PYLFLGkllWKDPDDKIID 574
                         570       580       590
                  ....*....|....*....|....*....|....*.
gi 1535790704 567 LVGPkGISNFLIGLTRGLSNLQAGQVFNYALVILIG 602
Cdd:TIGR01974 575 GFGP-GIARLVGAISKRLRKSQTGYLRWYAASMVVG 609
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
1-609 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 552.26  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704   1 MYICVLFLLVVGALGAGVGGRKLGEKGAGLLTSSCLIISLSWSVLIFYEIILSYSTTHIKLWRWLDSDLLTVYFGLQFDS 80
Cdd:MTH00032    1 MYLLVLLLPFINAFLLGFFGRLIGTIGSGILSTICMGSSTLIALFLAYEVLINDAVVHIELYKWIESEIFITHIGLLYDT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  81 LVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEA 160
Cdd:MTH00032   81 LSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 161 NKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVS--------------APSSDITLICLLLFIGAVGKSA 226
Cdd:MTH00032  161 NKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGGSVGSgimdrgyygggayeSPLAPFAIIGILLLIGCIGKSA 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 227 QLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYS 306
Cdd:MTH00032  241 QLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYS 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 307 TCSQLGYMVVACGLS-HYSISLFHLMNHAFFKALLFLSAGSVIHALS-DEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGF 384
Cdd:MTH00032  321 TCSQLGYMVLIIGIEgSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGL 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 385 PYLTGFYSKDLILELAFEQYYL------------------------------------TFAYWLGSFSALLTTLYSIRLV 428
Cdd:MTH00032  401 PYLTGFYSKDLILELTYSGRNMgipfgssllkiqgdigikkddrgsiggpegypsrgsAFAFWLGTVAALLTAFYSIRLV 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 429 YLTFLSNTNSRKA--IFRRVHEGSWNLVLPLIILALGSLFVGYLAKEVVwsFQITFPPIVPIFIKLLPVFFSLGGAALVI 506
Cdd:MTH00032  481 YITFIISPNSPKEslISSHINIVDKRVLTVLSLLCFGAIFVGYLIQDIL--IGDIEHPIVPPLIKVMPTLMGLFGMGLCL 558
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 507 VLYFYS--VHLFRVPSFMGRMG----YTFLYSAWQFNYVLNYFLAKRVWRGGHQISYRTIDKGTLELVGPKGISNFLIGL 580
Cdd:MTH00032  559 WAQKGTreGELYWGFDPIGPSFllsiYSFLGGAWQGDHLINKLVAIPLFSFGHWGIYKTLDRGWLELFGPQGISTIALRV 638
                         650       660       670
                  ....*....|....*....|....*....|.
gi 1535790704 581 TRGLSNLQAGQVFNYALVILIGVAIF--IWG 609
Cdd:MTH00032  639 SQFISNLQSGVISRYALVLLSFTIIFlaLWG 669
ND5 MTH00004
NADH dehydrogenase subunit 5; Validated
50-607 2.80e-137

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 214398 [Multi-domain]  Cd Length: 602  Bit Score: 413.02  E-value: 2.80e-137
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  50 IILSYSTTH--IKLWRWLDSDLLTVYFGLQFDSL----VAIMLLVITTISTlvhvFSTAYMLGDPHIPRFMSYLSFFTFL 123
Cdd:MTH00004   52 TLFLNSGTEsiTTNWPWIFTTTFNIPISFKLDQYslmfLPIALFVTWSILE----FSTWYMASDPHITKFFKYLLIFLIA 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 124 MVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNmvvv 203
Cdd:MTH00004  128 MLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFS---- 203
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 204 sapSSDITLICLL-LFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVG 282
Cdd:MTH00004  204 ---PTQTPTLPLLgLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLG 280
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 283 SLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDIRKMGG 362
Cdd:MTH00004  281 ALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGG 360
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 363 LIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFAYWLGSFSALLTTLYSIRLVYLTfLSNTNSRKAI 442
Cdd:MTH00004  361 LQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLV-QTGFPRTPPT 439
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 443 FrRVHEGSWNLVLPLIILALGSLFVGYLAKEVVWSFQITfPPIVPIFIKLLPVFFSLGGAALVIVLYFYSVHLfrVPSFM 522
Cdd:MTH00004  440 T-PINENTPTIINPITRLALGSILAGLLISSTILPTKTP-PMTMPTTTKLAALIVTILGILLALELSNMTTTL--TPPKQ 515
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 523 GRMgYTFLYSAWQFNYVLNYFLAKRVWRGGHQISYRTIDKGTLELVGPKGISNFLIGLTRGLSNLQAGQVFNYALVILIG 602
Cdd:MTH00004  516 NTL-HNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLTSFALT 594

                  ....*
gi 1535790704 603 VAIFI 607
Cdd:MTH00004  595 ILLLL 599
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
44-607 6.96e-133

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 402.43  E-value: 6.96e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  44 VLIFYEIILSYSTTHIKLWRWLDSDLLTVYFGLQFDSLVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFL 123
Cdd:MTH00208   71 INLLIWILLGCPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLN 150
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 124 MVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSlefSSLFNMVVV 203
Cdd:MTH00208  151 MLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNS---WNLNEILSL 227
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 204 SAPSSDITLICLL-LFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVG 282
Cdd:MTH00208  228 NNSNSFLINILLFgILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILG 307
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 283 SLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDIRKMGG 362
Cdd:MTH00208  308 SLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGG 387
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 363 LIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFAYWLGSFSALLTTLYSIRLVYLTFLSNTNSRKAI 442
Cdd:MTH00208  388 LSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLS 467
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 443 FrrVHEGSWNLVLPLIILALGSLFVGYLakevVWSFQITFPPI-VPIFIKLLPVFFSLGGAALVIVLYFYSVHLFRVPSF 521
Cdd:MTH00208  468 P--ISEENPNLTNPLLRLAIGTIISGWF----FSNFVFNLPPLtLPLILKSLPLIVTIIGAAFSFSFLLSLSSNPINSNF 541
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 522 mgrmgYTFLYSAWQFNYVLNYFLAKRVWRGGHQISYRTIDKGTLELVGPKGISNFLIGLTRGLSNLQAGQVFNYAL-VIL 600
Cdd:MTH00208  542 -----FSFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLsSTL 616

                  ....*..
gi 1535790704 601 IGVAIFI 607
Cdd:MTH00208  617 LFLLILT 623
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
38-607 1.84e-131

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 397.79  E-value: 1.84e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  38 ISLSWSVLIFYEIILSYSTTHIKLWRWLDSDLLTVYFGLQFDSLVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYL 117
Cdd:MTH00211   37 LSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYL 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 118 SFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSL 197
Cdd:MTH00211  117 LLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQL 196
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 198 FNMvvvsapSSDITLICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMT 277
Cdd:MTH00211  197 FIL------NLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGA 270
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 278 VTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDI 357
Cdd:MTH00211  271 VLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDI 350
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 358 RKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFAYWLGSFSALLTTLYSIRLVYLTFLSNTN 437
Cdd:MTH00211  351 RKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPR 430
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 438 SRKAIFrrVHEGSWNLVLPLIILALGSLFVGYLakeVVWSFQITFPPI--VPIFIKLLPVFFSLGGaALVIVLYFYSVHL 515
Cdd:MTH00211  431 FLSLSP--INENYKLLKNPLKRLALGSILAGFI---ITSNLPPEKPEIlsLPFLLKLMPLLVTIVG-LLLGLELVNLTHK 504
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 516 FRVPSFMGRMGYTFLYSAWQFNYVLNYFLAkrvwrGGHQISYRTIDKGTLELVGPKGISNFLIGLTRGLSNLQAGQVFNY 595
Cdd:MTH00211  505 QLKTSTLSFSNMLGYYPPIIHRLLPKLSLK-----WGQTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSY 579
                         570
                  ....*....|...
gi 1535790704 596 -ALVILIGVAIFI 607
Cdd:MTH00211  580 lALLLLSLLLILL 592
ND5 MTH00066
NADH dehydrogenase subunit 5; Provisional
62-601 3.54e-129

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214416 [Multi-domain]  Cd Length: 598  Bit Score: 391.96  E-value: 3.54e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  62 WRWLDSDLLTVYFGLQFDsLVAIMLLVIT---TISTLVhvFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFI 138
Cdd:MTH00066   64 FHWMNIFNFNINSSFKFD-QYSIIFLPIAlfvTWSILE--FAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFI 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 139 GWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMvvvsapSSDITLICLLLF 218
Cdd:MTH00066  141 GWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLL------NDNSTLPLLGLI 214
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 219 IGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQND 298
Cdd:MTH00066  215 LAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQND 294
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 299 LKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGS 378
Cdd:MTH00066  295 IKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGS 374
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 379 LSLMGFPYLTGFYSKDLILELAFEQYYLTFAYWLGSFSALLTTLYSIRLVYltFLSNTNSRKAIFRRVHEGSWNLVLPLI 458
Cdd:MTH00066  375 LALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIY--FSSMKFPRSLPLSPINENNPLIINPIK 452
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 459 ILALGSLFVGYLakeVVWSFQITFPPI--VPIFIKLLPVFFSLGGAALVIVLYFYSVHlfrvpSFMGRMGYTFLYSAWQF 536
Cdd:MTH00066  453 RLAWGSIIAGLL---IIFNILPMKPQIltMPTFMKLAALLVTLLGLLIALDLAKITSK-----TTPKTKMHSFSNLLAFF 524
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1535790704 537 NYVLNYFLAKRVWRGGHQISYRTIDKGTLELVGPKGISNFLIGLTRGLSNLQAGQVFNYALVILI 601
Cdd:MTH00066  525 PTIIHRLSPKTNLNSGQNIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLI 589
PRK07376 PRK07376
NADH-quinone oxidoreductase subunit L;
26-607 1.19e-120

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236005 [Multi-domain]  Cd Length: 673  Bit Score: 372.43  E-value: 1.19e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  26 KGAGLLTSSCLIISLSWSVLIFYEIILSYSTtHIKLWRWLDSDLLTVYFGLQFDSLVAIMLLVITTISTLVHVFSTAYML 105
Cdd:PRK07376   38 QPVAVLLISLVGAAAVLSYALLWSQIQGHEP-YERLFEWASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMA 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 106 GDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGL 185
Cdd:PRK07376  117 HDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGL 196
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 186 WDRFGSLEFS----SLFNMVVVSA-PSSDITLICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFL 260
Cdd:PRK07376  197 FWATGSFDFDgiadRLSELVSSGAvSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFL 276
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 261 LIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALL 340
Cdd:PRK07376  277 VARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAML 356
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 341 FLSAGSVIHALSD--------EQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYltfAYWL 412
Cdd:PRK07376  357 FLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANP---ALWF 433
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 413 -GSFSALLTTLYSIRLVYLTFL-----SNTNSRKAIFR-----------------------RVHEGSWNLVLPLIILALG 463
Cdd:PRK07376  434 vGFLTAGMTAFYMFRMYFLTFEgefrgNDKELQKELLAaadapghheghheehgehhhhsgSPHESPWTMTLPLVVLAVP 513
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 464 SLFVGYL-----------------AKEVVWSFQIT-FPPIVpifikLLPVFFSLGGAALVIVLYFY-----SVHLFRVPS 520
Cdd:PRK07376  514 SVLIGLLgtpwnnrfeaflhapgeALEAAAHFEWGeFLILA-----GASVGIALIGITLASLMYLLkkidpAAIAERFPP 588
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 521 FmgrmgYTFLYSAWQFNYVLNYFLAK---RVWRGGHQISYRTIDkGTLELVGPkgisnFLIGLTRGLSNLQAGQVFNYAL 597
Cdd:PRK07376  589 L-----YQFSLNKWYLDDIYEKLFVKgsrRLARQVLEVDYKVVD-GVVNLTGL-----VTLGSGEGLKYFENGRAQFYAL 657
                         650
                  ....*....|
gi 1535790704 598 VILIGVAIFI 607
Cdd:PRK07376  658 IVFGAVLGLV 667
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
32-601 1.49e-118

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 364.56  E-value: 1.49e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  32 TSSCLIISLSwSVLIFyeiILSYSTTHIKLWRWL--DSDLLTVYFGLQFDSLVAIMLLVITTISTLVhvFSTAYMLGDPH 109
Cdd:MTH00108   40 ISYAFIISLI-PTMMF---IHSGQEMIISNWHWMtiQTLKLSLSFKLDYFSMIFIPVALFVTWSIME--FSMWYMHSDPN 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 110 IPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRF 189
Cdd:MTH00108  114 INRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNL 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 190 GSLEFSSLFNMvvvsaPSSDITLICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFE 269
Cdd:MTH00108  194 NSWDLQQIFML-----NPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLME 268
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 270 QAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIH 349
Cdd:MTH00108  269 NNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIH 348
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 350 ALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFAYWLGSFSALLTTLYSIRLVY 429
Cdd:MTH00108  349 NLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIF 428
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 430 LTFLsnTNSRKAIFRRVHEGSWNLVLPLIILALGSLFVGYLAkevvwSFQI---TFPPI-VPIFIKLLPVFFSLGGAALV 505
Cdd:MTH00108  429 FALL--GQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLI-----SNNIpptTIPQMtMPLYLKLTALAVTILGFILA 501
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 506 IVLYFYSVHL-FRVPS----FMGRMGYtflysawqFNYVLNYFLAKRVWRGGHQISYRTIDKGTLELVGPKGISNFLIGL 580
Cdd:MTH00108  502 LELNLLTNNLkFKYPSntfkFSNMLGY--------FPTIMHRLPPYMNLTMSQKLASMLLDLIWLEKILPKTISLIQMKA 573
                         570       580
                  ....*....|....*....|.
gi 1535790704 581 TRGLSNlQAGQVFNYALVILI 601
Cdd:MTH00108  574 STTISN-QKGLIKLYFLSFLI 593
ND5 MTH00137
NADH dehydrogenase subunit 5; Provisional
62-607 2.02e-115

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214428 [Multi-domain]  Cd Length: 611  Bit Score: 356.83  E-value: 2.02e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  62 WRWLDSDLLTVYFGLQFD--SLVAIMLLVITTISTLVhvFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIG 139
Cdd:MTH00137   70 WNWMNTLTFDINISFKFDhySIIFTPIALYVTWSILE--FASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIG 147
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 140 WEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFnmvvVSAPSSDITLICLLLFI 219
Cdd:MTH00137  148 WEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIQQIF----ALSKDFDLTLPLLGLIL 223
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 220 GAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDL 299
Cdd:MTH00137  224 AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDI 303
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 300 KKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGSL 379
Cdd:MTH00137  304 KKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSL 383
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 380 SLMGFPYLTGFYSKDLILElAFEQYYLTfaYWlgsfsALLTTL--------YSIRLVYltFLSNTNSRKAIFRRVHEGSW 451
Cdd:MTH00137  384 ALTGTPFLAGFFSKDAIIE-ALNTSHLN--AW-----ALTLTLiatsftavYSLRVVF--FVSMGHPRFNPLSPINENNP 453
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 452 NLVLPLIILALGSLFVGYLakevvwsfqIT--FPPI------VPIFIKLLPVFFSLGG-------AALV---------IV 507
Cdd:MTH00137  454 AVINPIKRLAWGSIIAGLL---------ITsnILPLktpvmtMPPLLKLAALIVTILGllialelASLTnkqfkptptLP 524
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 508 LYFYSVHLFRVPSFMGRMgytflysAWQFNYVLnyflakrvwrgGHQISYRTIDKGTLELVGPKGISNFLIGLTRGLSNL 587
Cdd:MTH00137  525 PHHFSNMLGFFPAIIHRL-------TPKLNLTL-----------GQTIATQMVDQTWLEKTGPKGIASLQLPLITTTSNI 586
                         570       580
                  ....*....|....*....|
gi 1535790704 588 QAGQVFNYALVILIGVAIFI 607
Cdd:MTH00137  587 QQGMIKTYLTLFLLTLALAT 606
ndhF CHL00025
NADH dehydrogenase subunit 5
36-432 5.82e-111

NADH dehydrogenase subunit 5


Pssm-ID: 214338 [Multi-domain]  Cd Length: 741  Bit Score: 349.19  E-value: 5.82e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  36 LIISLSWSVLIFYEIILSySTTHIKLWRWLDSDLLTVYFGLQFDSLVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMS 115
Cdd:CHL00025   48 LSIVMIFSLNLSIQQING-SSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFA 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 116 YLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFS 195
Cdd:CHL00025  127 YLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFR 206
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 196 SLFNMVVVSAPSSDI-----TLICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQ 270
Cdd:CHL00025  207 DLFEIFNNLIYNNEVnllfaTLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIV 286
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 271 APLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHA 350
Cdd:CHL00025  287 IPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHS 366
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 351 L--------SDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFeQYYLTFAyWLGSFSALLTTL 422
Cdd:CHL00025  367 MepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILNDSW-LYSPIFA-IIAWSTAGLTAF 444
                         410
                  ....*....|
gi 1535790704 423 YSIRLVYLTF 432
Cdd:CHL00025  445 YMFRIYLLTF 454
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
31-607 3.39e-91

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 292.82  E-value: 3.39e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  31 LTSSCLIISLSWSVLIFYEIILSYSTTHIKLWRWLDSDLLTVYFGLQFDSLVAIMLLVITTISTLVHVFSTAYMLGDPHI 110
Cdd:MTH00165    5 LISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNI 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 111 PRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTrVEANKAAIKAMLVNRVGVWGLILAMfGLWDRFG 190
Cdd:MTH00165   85 NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQN-KKSYNAGMLTALSNRIGDVAILLSI-AWMMNFG 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 191 SLEFSSLFNMVvvsAPSSDITLICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQ 270
Cdd:MTH00165  163 SWNFIFYLDFM---KNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFS 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 271 APLaLMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHA 350
Cdd:MTH00165  240 SFF-SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHN 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 351 LSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFAYWLGSFSALLTTLYSIRLVYL 430
Cdd:MTH00165  319 MSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYY 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 431 TFLSNTNsrKAIFRRVHEGSWNLVLPLIILALGSLFVGYLakeVVWS-FQITFPPIVPIFIKLLPVFFSLGGAALVIVLY 509
Cdd:MTH00165  399 SMSGDFN--LKSLNNLSDESKFMLKSMILLLFMSIFGGSM---LSWLiFPEPYMICLPFYLKLLTLFVILLGGWLGYELS 473
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 510 FYSVhLFRVPSFMGRMGYTFLYSAWQFNYVLNYFLAKRVWRGGhQISYRTIDKGTLELVGPKGISNFLIGLTRGLSNLQA 589
Cdd:MTH00165  474 LMSL-SYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLG-SLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQN 551
                         570
                  ....*....|....*...
gi 1535790704 590 GQVFNYALVILIGVAIFI 607
Cdd:MTH00165  552 NNLKIYLLSFLLWMIILL 569
ND5 MTH00151
NADH dehydrogenase subunit 5; Provisional
31-608 2.59e-89

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214436 [Multi-domain]  Cd Length: 565  Bit Score: 287.51  E-value: 2.59e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  31 LTSSCLIISLSWSVLIFYEIILSYSTTHIKLWRWLDSDLLTVYFGLQFDSLVAIMLLVITTISTLVHVFSTAYMLGDPHI 110
Cdd:MTH00151    5 SLSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 111 PRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWltrvEANK---AAIKAMLVNRVGVwGLILAMFGLWD 187
Cdd:MTH00151   85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYY----QNKKslsAGMLTALTNRIGD-VLILLSIALLV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 188 RFGSLEFSSLFNMvvvsapsSDITLICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPF 267
Cdd:MTH00151  160 LLGHWSILSMWDF-------KLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPF 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 268 FEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSV 347
Cdd:MTH00151  233 LSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSI 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 348 IHALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFAYWLGSFSALLTTLYSIRL 427
Cdd:MTH00151  313 IHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARL 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 428 VYLTFLSNTNSrkAIFRRVHEGSWNLVLPLIILALGSLFVGYLAKEVVWSFqiTFPPIVPIFIKLLPVFFSLGGaalvIV 507
Cdd:MTH00151  393 SFCLVWGSMKS--SSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGF--SEEFFLPSYLKLLIGFVILLG----LF 464
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 508 LYFYSVHLFRVPSFMGRMGYtFLYSAWQFNYVLNYFLAKRVWRGGHqISYRTIDKGTLELVGPKGISNFLIGLtrgLSNL 587
Cdd:MTH00151  465 LSFGFWDSGFSSSKMVKLSF-FFSSMWFLSPLSSQPLKSLSLKLSN-SSMKSLDMGWLEILGGQGVFKANKSF---SVLN 539
                         570       580
                  ....*....|....*....|..
gi 1535790704 588 QAGQVFNYAL-VILIGVAIFIW 608
Cdd:MTH00151  540 ESWPVKWFNFfIGLILLLVLFL 561
ND5 MTH00209
NADH dehydrogenase subunit 5; Provisional
50-607 3.26e-84

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177252 [Multi-domain]  Cd Length: 564  Bit Score: 274.22  E-value: 3.26e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  50 IILSYSTTHIKLWRWLDSDLLTVYFGLQFDSLVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVS 129
Cdd:MTH00209   22 IFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLIF 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 130 SDNYLQLFIGWEGVGLCSYLLINFWLTRvEANKAAIKAMLVNRVGVWGLILA-----MFGLWDRFgSLEFSSLFNMVvvs 204
Cdd:MTH00209  102 VPNLITLLLGWDGLGLVSYLLVIYYQNS-KSLSAGMLTALTNRVGDALLILSiawmlMHGNWNIF-YLNFNSNLGSV--- 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 205 apssditlICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSL 284
Cdd:MTH00209  177 --------ISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSL 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 285 TVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDIRKMGGLI 364
Cdd:MTH00209  249 TTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLW 328
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 365 KLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFAYWLGSFSALLTTLYSIRLVYLTFLSNTNSRKAIFr 444
Cdd:MTH00209  329 YQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNS- 407
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 445 rVHEGSWNLVLPLIILALGSLFVGYLAKEVvwSFQITFPPIVPIFIKLLPVFFSLGGAALVIVLY---FYSVHLFRVPSF 521
Cdd:MTH00209  408 -SFDQNKLNLKPMLVLTLGSITGGSVMSWV--MVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLkknFFLIKGYKVNYF 484
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 522 MGRMGYTFLYSAWQFNYVLNYFLAKrvwrgghqiSYRTIDKGTLELVGPKGISNFLIGLTRGLSNLQAGQVFNYALVILI 601
Cdd:MTH00209  485 LSQMWFLPDLSSQPVNKFTMKLSKT---------MLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMML 555

                  ....*.
gi 1535790704 602 GVAIFI 607
Cdd:MTH00209  556 ILLGVI 561
ND5 MTH00207
NADH dehydrogenase subunit 5; Provisional
72-607 6.85e-75

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 164753 [Multi-domain]  Cd Length: 572  Bit Score: 249.68  E-value: 6.85e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  72 VYFGLQFDSLVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLI 151
Cdd:MTH00207   49 INFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 152 NFWLTRVEANKAAIKAmLVNRVGVWGLILAMF-----GLWdrfgslefsSLFNMVVVSAPSsditLICLLLFIGAVGKSA 226
Cdd:MTH00207  129 IYYQNPKSLGAGMITA-LTNRIGDVMLLLSIGwtlnqGHW---------SITNMWQTDMNN----YIALSIMIAAMTKSA 194
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 227 QLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYS 306
Cdd:MTH00207  195 QMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALS 274
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 307 TCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPY 386
Cdd:MTH00207  275 TLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPF 354
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 387 LTGFYSKDLILELAFEQYYLTFAYWLGSFSALLTTLYSIRLVYLTFLSNTNSRKAIFrrVHEGSWNLVLPLIILALGSLF 466
Cdd:MTH00207  355 LSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHH--LEDEDKSLTTPMLLLTLGAIT 432
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 467 VGylAKEVVWSFQITFPPIVPIFIKLLPVFFSLGGAALVivlYFYSVHLFRVPSFMGRMGYT--FLYSAWQFNYVLNYFL 544
Cdd:MTH00207  433 SG--SALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLA---WLFTTPNITKTPLLINNPLShfASCLMWFLVPLSSQFI 507
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1535790704 545 AKRVWRGGHQiSYRTIDKGTLELVGPKGISNFLIGLTRGLSNLQAGQVFNYALVILIGVAIFI 607
Cdd:MTH00207  508 MSTPMNLSHN-YLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMMSFVLLTIII 569
PRK12647 PRK12647
putative monovalent cation/H+ antiporter subunit A; Reviewed
62-468 5.60e-70

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237156 [Multi-domain]  Cd Length: 761  Bit Score: 240.98  E-value: 5.60e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  62 WRWLDSdlLTVYFGLQFDSLVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWE 141
Cdd:PRK12647   48 YAWVPS--LGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWE 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 142 GVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGA 221
Cdd:PRK12647  126 LTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASGDVIREHPLYLAILLLVLGGA 205
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 222 VGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKK 301
Cdd:PRK12647  206 FTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKL 285
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 302 VIAYSTCSQLGYMVVACGL-SHYSISLF--HLMNHAFFKALLFLSAGSVIHAlSDEQDIRKMGGLIKLIPLTYIMVVVGS 378
Cdd:PRK12647  286 ILAYSTVSALGTLVMLLGLgSELAIKAAvlFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAA 364
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 379 LSLMGFPYLTGFYSKDLILELafeqyyLTFAYWLGSFSALLTTLYSIRLVYLTFLSN----TNSRKAIFRRVHEGSWNLV 454
Cdd:PRK12647  365 LSMAGLPPLFGFLAKELIYEA------LLEAPLWSLILTVAAVLGNALMVAVAFLVGikpfLGKLVETPKHPHEAPVLMW 438
                         410
                  ....*....|....
gi 1535790704 455 LPLIILALGSLFVG 468
Cdd:PRK12647  439 LGPAVLAVLGLLFG 452
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
130-409 6.74e-62

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 206.78  E-value: 6.74e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 130 SDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSD 209
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 210 ITLICLLLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFLLIRSSPFFEQA-PLALMTVTIVGSLTVL 287
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSsPFIQQILLILAIISML 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 288 FAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSH---YSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDIRKMGGLI 364
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTiygIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1535790704 365 KLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFA 409
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLV 284
PRK12646 PRK12646
DUF4040 family protein;
69-463 1.14e-59

DUF4040 family protein;


Pssm-ID: 183646 [Multi-domain]  Cd Length: 800  Bit Score: 213.08  E-value: 1.14e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  69 LLTVYFGLQFDSLVAIMLLVITTISTLVHVFSTAYM-LGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCS 147
Cdd:PRK12646   67 TLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSS 146
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 148 YLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGAVGKSAQ 227
Cdd:PRK12646  147 FLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQ 226
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 228 LGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYST 307
Cdd:PRK12646  227 FPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYST 306
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 308 CSQLGYMVVACGL-------SHYSIS----------LFHLMNHAFFKALLFLSAGSVIHAlSDEQDIRKMGGLIKLIPLT 370
Cdd:PRK12646  307 ISQLGMIMAMVGIgggyaqhQQDAIAsiyvfvlfaaLFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKM 385
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 371 YIMVVVGSLSLMGFPYLTGFYSKDLILE-----LAFEQYYLTFAY---WLGSFSALLTTLYSIRLVYLTFLSNTNSRKAI 442
Cdd:PRK12646  386 NLVMTIAALSMAGVPFLNGFLSKEMFLDaltqtGQLSQFSLISMIiivFIGVIASIFTFTYALYMVKEVFWGKYDSKVFT 465
                         410       420
                  ....*....|....*....|.
gi 1535790704 443 FRRVHEgSWNLVLPLIILALG 463
Cdd:PRK12646  466 KKNIHE-PWLFSLPSLILMVL 485
PRK12644 PRK12644
putative monovalent cation/H+ antiporter subunit A; Reviewed
62-472 3.09e-59

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237154 [Multi-domain]  Cd Length: 965  Bit Score: 213.63  E-value: 3.09e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  62 WRWLDSdlLTVYFGLQFDSLVAIMLLVITTISTLVHVFSTAYML-GDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGW 140
Cdd:PRK12644   58 VPWIPS--LGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDdDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFW 135
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 141 EGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMvvvSAPSSDITLICLLLFIG 220
Cdd:PRK12644  136 ELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLAD---PPTGPAVSVAVVLILVG 212
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 221 AVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLK 300
Cdd:PRK12644  213 ALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLK 292
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 301 KVIAYSTCSQLGYMVVACGLSHYSISLFHL---MNHAFFKALLFLSAGSVIHAlSDEQDIRKMGGLIKLIPLTYIMVVVG 377
Cdd:PRK12644  293 LILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALA 371
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 378 SLSLMGFPYLTGFYSKDLILELAFEQYYLTFAYW-------LGSfsaLLTTLYSIRLVYLTFLSNTNSRKAIFRR-VHEG 449
Cdd:PRK12644  372 AASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPvvlagivLGS---ILTVAYSLRFLWGAFARKPGAFPSVAVTeMHRP 448
                         410       420
                  ....*....|....*....|...
gi 1535790704 450 SWNLVLPLIILALGSLFVGYLAK 472
Cdd:PRK12644  449 SPLFLAPPAVLAVLGLVLGLLPA 471
PRK12648 PRK12648
putative monovalent cation/H+ antiporter subunit A; Reviewed
28-433 6.86e-59

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237157 [Multi-domain]  Cd Length: 948  Bit Score: 212.36  E-value: 6.86e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  28 AGLLTSSCLIISLSWSVLIFYEIILSYStthiklWRWLDSdlLTVYFGLQFDSLVAIMLLVITTISTLVHVFSTAYMLGD 107
Cdd:PRK12648   32 AGLVALAALVLLALLYPAVAAGEVIRAE------IEWLPA--LGLNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPA 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 108 PHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWD 187
Cdd:PRK12648  104 DPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGH 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 188 RFGSLEFSSLFNM--VVVSAPSSDITLICLLLfiGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSS 265
Cdd:PRK12648  184 IVGSYDLDVVLAAgdLIRAHPLYPPALVLILL--GAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLW 261
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 266 PFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGL-SHYSI--SLFHLMNHAFFKALLFL 342
Cdd:PRK12648  262 PVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLgSPLAAvaAIFHIINHATFKASLFM 341
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 343 SAGSVIHAlSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFAYW----LGSFSAL 418
Cdd:PRK12648  342 AAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFAETLDTHLLGSLDWllpvAATLAGA 420
                         410
                  ....*....|....*
gi 1535790704 419 LTTLYSIRLVYLTFL 433
Cdd:PRK12648  421 FSVAYSLRFIHDVFF 435
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
76-431 9.00e-59

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 202.68  E-value: 9.00e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  76 LQFDSLVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWL 155
Cdd:COG0651    72 LVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGG 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 156 TRvEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMvVVSAPSSDITLICLLLFIGAVGKSAQLGLHTWLP 235
Cdd:COG0651   152 TK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR-LAELDPGLLLAAFALLLVGFGIKAALFPLHFWLP 229
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 236 DAM-EGPTPVSALIHAAtMVTAGVFLLIR-SSPFF--EQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQL 311
Cdd:COG0651   230 DAYpAAPSPVSALLSGL-LTKVGVYAILRvLTLLFgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 312 GYMVVACGL-SHYSIS--LFHLMNHAFFKALLFLSAGSVIHALsDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLT 388
Cdd:COG0651   309 GYILLGLGLgTPLGLAgaLFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1535790704 389 GFYSKDLILELAFEQYYLTFAyWLGSFSALLTTLYSIRLVYLT 431
Cdd:COG0651   388 GFVSKWLLLQAALEAGAWLLA-AVLLLSSLLTLAYFVRIFGRA 429
2a6301s01 TIGR00940
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ...
70-478 1.66e-58

Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273353 [Multi-domain]  Cd Length: 793  Bit Score: 209.70  E-value: 1.66e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  70 LTVYFGLQFDSLVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYL 149
Cdd:TIGR00940  65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 150 LINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGAVGKSAQLG 229
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFP 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 230 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCS 309
Cdd:TIGR00940 225 FHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTIS 304
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 310 QLGYMVVACGLSHYSI----------------SLFHLMNHAFFKALLFLSAGSVIHAlSDEQDIRKMGGLIKLIPLTYIM 373
Cdd:TIGR00940 305 QLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTL 383
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 374 VVVGSLSLMGFPYLTGFYSKDLILELAFEQYYL------TFAY---WLGSFSALLTTLYSIRLVYLTFLSNTNSRKaIFR 444
Cdd:TIGR00940 384 AMIASAAMAGVPPFNGFLSKEMFFAEAITAHLVnpfdtvTLGYlfpYVATVASVFTFVYSLRFIHGVFFGRPKPED-LPR 462
                         410       420       430
                  ....*....|....*....|....*....|....
gi 1535790704 445 RVHEGSWNLVLPLIILALGSLFVGYLAKEVVWSF 478
Cdd:TIGR00940 463 KPHEPPRWMLASPDILVLLVLVFGLFPAQLTGPI 496
PRK12649 PRK12649
putative monovalent cation/H+ antiporter subunit A; Reviewed
72-468 4.24e-58

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 183649 [Multi-domain]  Cd Length: 789  Bit Score: 208.53  E-value: 4.24e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  72 VYFGLQFDSLVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLI 151
Cdd:PRK12649   72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 152 NFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFN--MVVVSAPSSDITLICL-LLFIGAVGKSAQL 228
Cdd:PRK12649  152 GYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQdsELIENIKGHPLFLITLiLIFIGAAAKSAQG 231
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 229 GLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTC 308
Cdd:PRK12649  232 PFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTI 311
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 309 SQLGYMVVACGLSHY-------SISLFHLMNHAFFKALLFLSAGSVIHALSdEQDIRKMGGLIKLIPLTYIMVVVGSLSL 381
Cdd:PRK12649  312 SQLAYLMTMYGYTTYhepglgvAAATFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALAM 390
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 382 MGFPYLTGFYSKDLILELAFEQYYLT---FAYWLGSFSAL---LTTLYSIRLVYLTFLSNtNSRKAIFRRVHEGSWNLVL 455
Cdd:PRK12649  391 AGIPPLNGFLSKEMFYETSVEMGALIggpFTIIIPAVAVLggvFTFAYSIKLIDGIFLGE-RTHDHLPHHIHEAPYVMLI 469
                         410
                  ....*....|...
gi 1535790704 456 PLIILALGSLFVG 468
Cdd:PRK12649  470 PAAFLAGLVILFG 482
PRK06525 PRK06525
hydrogenase 4 subunit D; Validated
26-402 7.11e-56

hydrogenase 4 subunit D; Validated


Pssm-ID: 180606 [Multi-domain]  Cd Length: 479  Bit Score: 196.35  E-value: 7.11e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  26 KGAGLLTSSCLIISLSWSVLIFYEIilSYSTTHIKLWRWLDSDLltvyFGLQFDSLVAIMLLVITTISTLVHVFSTAYML 105
Cdd:PRK06525   27 AELGVLFAALTTLCMLSLAYAFYQA--GKVAVTLTLVNLGDVAL----FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMS 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 106 -------GDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRvEANKAAIKAMLVNRVGVWGL 178
Cdd:PRK06525  101 pgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGL 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 179 ILAMFGLWDRFGSLEFSSLFNMvvvsaPSSDITLICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGV 258
Cdd:PRK06525  180 YLAAATLFLQTGTFALSALSGL-----HGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGV 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 259 FLLIRSSPFFEQAPLALMTV-TIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHY------SISLFHLM 331
Cdd:PRK06525  255 YIFARAIQSMGPIPHVIGYVgAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIF 334
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1535790704 332 NHAFFKALLFLSAGSVIHALSdEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFE 402
Cdd:PRK06525  335 NHAFAKSLFFLVAGALSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFE 404
PRK12645 PRK12645
monovalent cation/H+ antiporter subunit A; Reviewed
74-462 2.17e-55

monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237155 [Multi-domain]  Cd Length: 800  Bit Score: 200.92  E-value: 2.17e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  74 FGLQFDSLVAIMLLVITTISTLVHVFSTAYM-LGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLIN 152
Cdd:PRK12645   72 FTLYVDGLSLLFALLITGIGSLVVLYSIYYLsKKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLIS 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 153 FWLTRVEANKAAIKAMLVNRVGVwgliLAMFG----LWDRFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGAVGKSAQL 228
Cdd:PRK12645  152 YWYEREASRYGAQKSMLITVFGG----LSMLGgfilLYIMTGSFSIREMIANADEIQNSPLFIPAMILILLGAFTKSAQF 227
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 229 GLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTC 308
Cdd:PRK12645  228 PFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTV 307
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 309 SQLGYMVVACGLS----HYSIS------------LFHLMNHAFFKALLFLSAGSVIHAlSDEQDIRKMGGLIKLIPLTYI 372
Cdd:PRK12645  308 SQLGLIMSLLGIGaaslHYQGDdskiyaaaitaaIFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFT 386
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 373 MVVVGSLSLMGFPYLTGFYSKDLILE------------LAFEQYYLTFAYWLGSfsaLLTTLYSIRLVYLTFLSNTNSRK 440
Cdd:PRK12645  387 IALIGALSMAGLPPFNGFLSKEMFFEsmlnateanlfsLDTWGVLFPVIAWVAS---VFTFVYSIIFIFKTFFGKYKPEQ 463
                         410       420
                  ....*....|....*....|..
gi 1535790704 441 aIFRRVHEGSWNLVLPLIILAL 462
Cdd:PRK12645  464 -LPKKAHEAPIGMLISPIILAS 484
PRK12650 PRK12650
DUF4040 family protein;
65-476 1.52e-53

DUF4040 family protein;


Pssm-ID: 237158 [Multi-domain]  Cd Length: 962  Bit Score: 197.19  E-value: 1.52e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  65 LDSDLLTVYFGLQFDSLVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVG 144
Cdd:PRK12650   64 LLGNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVS 143
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 145 LCSYLLINfwLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGAVGK 224
Cdd:PRK12650  144 LASFFLIA--RSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVWAEKPGLTTVVAVLIAVAAFTK 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 225 SAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIA 304
Cdd:PRK12650  222 SAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTA 301
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 305 YSTCSQLGYMVVACGL-SHYSIS--LFHLMNHAFFKALLFLSAGSVIHAlSDEQDIRKMGGLIKLIPLTYIMVVVGSLSL 381
Cdd:PRK12650  302 YSTVSQLGWIVATIGVgTPFALTaaVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSM 380
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 382 MGFPYLTGFYSKDLILELAFEQYYLTFAYWL----GSFSALLTTLYSIRLVYLTFLSNTNSRKAifrrVHEGSWNLVLPL 457
Cdd:PRK12650  381 AAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLllvgAALGAVFTFAYSARLVLGAFVDGPRDMSH----VKEAPVSLWLPA 456
                         410       420
                  ....*....|....*....|...
gi 1535790704 458 IILALGSL----FVGYLAKEVVW 476
Cdd:PRK12650  457 ALPGALSLplglVPGLLDAPVSA 479
PRK07390 PRK07390
NAD(P)H-quinone oxidoreductase subunit F; Validated
62-507 6.43e-52

NAD(P)H-quinone oxidoreductase subunit F; Validated


Pssm-ID: 236008 [Multi-domain]  Cd Length: 613  Bit Score: 188.58  E-value: 6.43e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  62 WRWLDSDLLTVYFGLQFDSLVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWE 141
Cdd:PRK07390   71 FPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLE 150
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 142 GVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMV-VVSAPSSDITLICLLLFIG 220
Cdd:PRK07390  151 ILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAaTANLDPLTATLLGLALIAG 230
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 221 AVGKSAQLGLHTWLPDAMEGPTPVSALIHAAtMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLK 300
Cdd:PRK07390  231 PTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIK 309
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 301 KVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIhALSDEQDIRKMGGLIKLIPLTYIMVVVGSLS 380
Cdd:PRK07390  310 RALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSII-LTTITQDLTELGGLWSRMPATTLAFLVGSAG 388
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 381 LMGFPYLTGFYSKDLILELAFEQYYLTFAYWLgsFSALLTTLYSIRLVYLTFLSNtnsRKAIFRRVHEGSWNLVLPLIIL 460
Cdd:PRK07390  389 LVALLPLGGFWALLRLADGLWAVSPWLVGVLL--LVNALTAFNLTRVFRLVFLGK---PQQKTRRSPEVLWPMALPMVIL 463
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*....
gi 1535790704 461 ALGSLFVgylakevvwsfqitfpPIVPIFIKLLP--VFFSLGGAALVIV 507
Cdd:PRK07390  464 AGFTLHL----------------PLLLQQWGLLPswEALNLWAAPLLVA 496
PRK08168 PRK08168
NADH-quinone oxidoreductase subunit L;
62-381 4.39e-45

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236171 [Multi-domain]  Cd Length: 516  Bit Score: 167.57  E-value: 4.39e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  62 WRWLDSDLLTVyfglqfDSLVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWE 141
Cdd:PRK08168   57 AAWPAAAWLEV------SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWA 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 142 GVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGA 221
Cdd:PRK08168  131 AISLALHRLLCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAQGASPSLQAAALLLVLAV 210
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 222 VGKSAQLGLHTWLPDAMEGPTPVSALIHAAtMVTAGVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKK 301
Cdd:PRK08168  211 ILKTAQLPVHGWLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKV 289
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 302 VIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVI-----HALSDEQDIRKMGGLIkLIPLTYIMVVV 376
Cdd:PRK08168  290 RLAWSTVAQMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAVrdtrlRRLQGPQSAAGVVSLL-LAPLLSAALVL 368

                  ....*
gi 1535790704 377 GSLSL 381
Cdd:PRK08168  369 LLQSL 373
ND5 MTH00095
NADH dehydrogenase subunit 5; Provisional
37-434 7.76e-44

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177158 [Multi-domain]  Cd Length: 527  Bit Score: 164.32  E-value: 7.76e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  37 IISLSWSVLIFYEIILSYSTTHIKLWRWldsDLLTVYFGLQFDSLvaIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSY 116
Cdd:MTH00095    7 LILFFFFFLLLFILFLPFMKLNLFFLEW---DFLSLKFNFYFNSL--LFSLILLLVTLSVLVFSSYYMNGELNFNYFYFV 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 117 LSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWlTRVEANKAAIKAMLVNRVGVWgLILAMFGLWDRFGSLEFSS 196
Cdd:MTH00095   82 LLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFY-NNWDSNSGAMNTALTNRIGDF-FIFLFFSGFIFSSYYFFSF 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 197 LFNMVVVSapssditlicLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLaLM 276
Cdd:MTH00095  160 SFFSSSMI----------LMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNV-MK 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 277 TVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQD 356
Cdd:MTH00095  229 IMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQD 308
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1535790704 357 IRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFAYWLGSFSALLTTLYSIRLVYLTFLS 434
Cdd:MTH00095  309 GRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLS 386
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
79-471 2.52e-42

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 159.27  E-value: 2.52e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  79 DSLVAIMLLVITTISTLVHVFSTAymLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRv 158
Cdd:PRK08375   76 DSLSALFLLVTSILAIAALLYAIG--YGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR- 152
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 159 EANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVvvsAPSSDITLICLLLFIGAVGKSAQLGLHTWLPDAM 238
Cdd:PRK08375  153 RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGAL---AENPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 239 EGPTPVSALIHAATMVTAGVFLLIRSS-----PFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGY 313
Cdd:PRK08375  230 PAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGY 309
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 314 MVVACGL-SHYSIS--LFHLMNHAFFKALLFLSAGSVIHAlSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGF 390
Cdd:PRK08375  310 ILLGLALlTPLALAagLLHLLHHALMKGALFLAAGAIEVT-YGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGF 388
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 391 YSKDLILELAFEQYYLTFAYWLGsFSALLTTLYSIRLVY-LTFLSNTNSRKAIFRRVhegSWNLVLPLIILALGSLFVGY 469
Cdd:PRK08375  389 VSKWYLVVGAVEAGQWLVLAVLL-ASSLLALLYFLRIWYrAFFGPPPPGSEAPKQEA---PLGMLAPSLALALLSLLLGI 464

                  ..
gi 1535790704 470 LA 471
Cdd:PRK08375  465 YA 466
PRK06521 PRK06521
hydrogenase 4 subunit B; Validated
74-475 4.23e-40

hydrogenase 4 subunit B; Validated


Pssm-ID: 235820 [Multi-domain]  Cd Length: 667  Bit Score: 155.43  E-value: 4.23e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  74 FGLQFDSLVAIMLLVITTISTLVHVFSTAYM-LGDPHIPRFMS-YLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLI 151
Cdd:PRK06521   74 FHLRLDALSAFFLLVISLLGAAASLYSLGYFrEYEGKGPGAMGfFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLV 153
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 152 NFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSditLICLLLFIGAVGKSAQLGLH 231
Cdd:PRK06521  154 IANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAHLSPFWAS---LVFLLALFGFGAKAGLVPLH 230
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 232 TWLPDAM-EGPTPVSALIhAATMVTAGVFLLIRSSPFFEQAP--------LALMTVTIVgsLTVLFAAtvgvIQNDLKKV 302
Cdd:PRK06521  231 VWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPgwwwgvlvLALGAISAV--LGVLYAL----AEHDLKRL 303
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 303 IAYSTCSQLGYMVVACGLSHYSIS--------------LFHLMNHAFFKALLFLSAGSVIHALSdEQDIRKMGGLIKLIP 368
Cdd:PRK06521  304 LAYSTIENIGIIFVGLGLAMVFIAygmpllaalaltaaLYHLLNHALFKSLLFLGAGAVLHATG-TRDMEKLGGLIRRMP 382
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 369 LTYIMVVVGSLSLMGFPYLTGFYSKDLILELAF-----EQYYLTFAYWLG----SFSALLTTLYSIRLVYLTFLSNTNSR 439
Cdd:PRK06521  383 WTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLsspglPQWGLKLAVPIAaamlALTAALAAMCFVKFYGITFLGRPRSE 462
                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 1535790704 440 KAifRRVHEGSWNLVLPLIILALGSLFVGYLAKEVV 475
Cdd:PRK06521  463 KA--EEAHEVPRWMRAAMLLLAALCVLLGLLPGWVA 496
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
79-471 7.10e-38

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 147.04  E-value: 7.10e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  79 DSLVAIMLLVITTISTLVHVFSTAYMLG-DPHIPRFMSYLSFFTFLMVVLVSSDNYlQLFIGWEGVGLCSYLLINFWLTR 157
Cdd:PRK12667   81 DLLGALLGLLTALVMFLILIYSYWYLEHeSGPEWYYTLLLGLEAGMLGILLTGDAF-NLFVMLEVLSISAYGLVAYYRDR 159
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 158 VEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSL------FNMVVVSAPSSDI---TLICLLLFIGAVG-KSAQ 227
Cdd:PRK12667  160 GDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLsakirgLSFPLTGGLAGNPplaLGVALALALWAFTiKAAI 239
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 228 LGLHTWLPDAM-EGPTPVSALIhAATMVTAGVFLLIR-------SSPFFEQAPLALMTVTIV-GSLTVLFAATVGVIQND 298
Cdd:PRK12667  240 FPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRflytifgISPSLIDFRAALSPILIIlGAVSAIIGALMMVVQKD 318
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 299 LKKVIAYSTCSQLGYMVVACGL-SHYSI--SLFHLMNHAFFKALLFLSAGSVIHAlSDEQDIRKMGGLIKLIPLTYIMVV 375
Cdd:PRK12667  319 VKRLLAYSTISHMGYIFMGIGIgTQLGLaaALFHIINHAIAKSLLFLASGVFIHA-AGTRDIDELAGLGRKMPIASFAFL 397
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 376 VGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFAYWLGSFSAlLTTLYSIRLVYLTFLSNTNSRKaifRRVHEGSWNLVL 455
Cdd:PRK12667  398 IGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGYFRAWYSLFFGKPKSGE---EVEHKESPSMSV 473
                         410
                  ....*....|....*.
gi 1535790704 456 PLIILALGSLFVGYLA 471
Cdd:PRK12667  474 VILVLALAVLILGILA 489
PRK08376 PRK08376
putative monovalent cation/H+ antiporter subunit D; Reviewed
79-475 3.42e-37

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236252 [Multi-domain]  Cd Length: 521  Bit Score: 145.24  E-value: 3.42e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  79 DSLVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRV 158
Cdd:PRK08376   89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTW 168
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 159 EANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSDItlICLLLFIGAVG-KSAQLGLHTWLPDA 237
Cdd:PRK08376  169 EAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAK--IALALFIAGLAmKSGAVPVHMWLPDA 246
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 238 M-EGPTPVSALIHAATMvtAGVFLLIRSSPFFEQAPLALMTV----TIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLG 312
Cdd:PRK08376  247 YpAAPSSISAMLLVIKQ--AGLYALARVLFSIYGPAINLATVgwviIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIG 324
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 313 YMV--VACGLSHYSIS-------------LFHLMNHAFFKALLFLSAGSVIHALSdEQDIRKMGGLIKLIPLTYIMVVVG 377
Cdd:PRK08376  325 YMLlgLGVGLAALGDPamasygeialaggIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFLIG 403
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 378 SLSLMGFPYLTGFYSKDLILELAFeqyylTFAYWLGSFSALLTTLYSIRLVYLTFLSNTNSRKAIFRRVHEGSWNLVLPL 457
Cdd:PRK08376  404 AAAIVGLPPFNGFASKWLIYESSA-----LFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMNVKEPPKPMLVPM 478
                         410
                  ....*....|....*...
gi 1535790704 458 IILALGSLFVGYLAKEVV 475
Cdd:PRK08376  479 LILAIAIIGMGLFPWQIS 496
PRK08668 PRK08668
NADH dehydrogenase subunit M; Validated
114-510 4.71e-35

NADH dehydrogenase subunit M; Validated


Pssm-ID: 236332 [Multi-domain]  Cd Length: 610  Bit Score: 140.13  E-value: 4.71e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 114 MSYLSFFTFLMVVLVSSDnYLQLFIGWEGVGLCSYLLInfWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLE 193
Cdd:PRK08668  102 MFALMSLAGVLGVFLAND-LLTLYIFWEIMTFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFD 178
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 194 FSSLFNMVVvSAPSSDITLICLLLFIGA-VGKSAQLGLHTWLPDAM-EGPTPVSALIHAAtMVTAGVFLLIRSS------ 265
Cdd:PRK08668  179 FADISQGLI-NDTSTGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQ-LSKLGAYGFLLVLyvlpgt 256
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 266 ------PFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSH---YSISLFHLMNHAFF 336
Cdd:PRK08668  257 klfsefGTYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTslgFAGGLFHVFNHALF 336
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 337 KALLFLSAGSVIHAlSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQ--YYLTFAYWLGS 414
Cdd:PRK08668  337 KGLFFLIFAAVIYR-TGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKgmPITAFMAFFGS 415
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 415 FSALlttLYSIRLVYLTFLSNtnsRKAIFRRVHEGSWNLVLPLIILALGSLFVGYLAKEVVWSFQITF--PPIVPIFIKL 492
Cdd:PRK08668  416 IGSF---LYVFRPLAGVFLGQ---LPSDHKDVKEAPLPMLIPMAILVLLNVVFGVAPGLVLQEINKIFgeLGIGPIDYEG 489
                         410
                  ....*....|....*....
gi 1535790704 493 LPVFFSLGGA-ALVIVLYF 510
Cdd:PRK08668  490 WEIKTGFGSWnALTVFILF 508
PRK08667 PRK08667
hydrogenase membrane subunit; Validated
74-518 7.36e-34

hydrogenase membrane subunit; Validated


Pssm-ID: 236331 [Multi-domain]  Cd Length: 644  Bit Score: 136.78  E-value: 7.36e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  74 FGLQFDSLVAIMLLVITTISTLVHVFSTAY---MLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLL 150
Cdd:PRK08667   71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 151 INFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSslfnmvVVSAPSSDITLICLLLFIGAVGKSAQLGL 230
Cdd:PRK08667  151 VMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELS------PLGASAGILSLVFLLLFLGFGIKAGIIPF 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 231 HTWLPDAMEG-PTPVSALIhAATMVTAGVFLLIRSSPFFEQAPLAL-MTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTC 308
Cdd:PRK08667  225 HKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWgVLILLAGSISALLGVIYALKEHDLKGLLAYSSI 303
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 309 SQLGYMVVACGLshYSI----------------SLFHLMNHAFFKALLFLSAGSVIHALSDeQDIRKMGGLIKLIPLTYI 372
Cdd:PRK08667  304 ENIGIILMGIGL--YVIfgvygldtlallalggALFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSA 380
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 373 MVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLT-------FAYWLGSF---SALLTTLYsIRLVYLTFLSNTNSRKAi 442
Cdd:PRK08667  381 LFLVGAVSIAALPPFNGFASELLLYESFFQSFSVAdplikilLFSVLAIFaltSALAAACF-VKAFGITFLAMPRSQEA- 458
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1535790704 443 fRRVHEGSWNLVLPLIILALGSLFVGYLAKEVVWSFQITFPpivpiFIKLLPVFFSLG--GAALVIVLYFYSVHLFRV 518
Cdd:PRK08667  459 -RSAKEVSKPMLIGPAVLAVACLVLGLFSVQIFSLAGYSFD-----LPDLLLVGLLLVifGVLVFGMVRLFSPRKSRI 530
PRK12668 PRK12668
Na(+)/H(+) antiporter subunit D;
133-468 2.55e-31

Na(+)/H(+) antiporter subunit D;


Pssm-ID: 237168 [Multi-domain]  Cd Length: 581  Bit Score: 128.86  E-value: 2.55e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 133 YLQLFIGWEGVGLCSYLLInfWLTRV-EANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSlfnMVVVSAPSSdit 211
Cdd:PRK12668  115 LLTLFVFWELMAFTSTFLV--WARGTkAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGA---IAGLGGTAA--- 186
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 212 licLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQapLALMtvtivGSLTVLFAAT 291
Cdd:PRK12668  187 ---WLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTEL--LIYI-----GAAMAVYGVF 256
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 292 VGVIQNDLKKVIAYSTCSQLGYMVVACGL-SHYSI--SLFHLMNHAFFKALLFLSAGSVIHALSdEQDIRKMGGLIKLIP 368
Cdd:PRK12668  257 FALLENDLRRLLSYHIVSQVGYMVAGIGIgTALAIngAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSMP 335
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 369 LTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYlTFAYWLGSFSALLTTLYS-IRLVYLTFLSNTNSrkaifRRVH 447
Cdd:PRK12668  336 LTALFCLVGALSISAFPLFSGFVSKSMIISAAGEDHY-VWVWLLLLLASAGTFLHFgIKLPYFAFFGGDSG-----LRVK 409
                         330       340
                  ....*....|....*....|.
gi 1535790704 448 EGSWNLVLPLIILALGSLFVG 468
Cdd:PRK12668  410 DAPRNMLVAMGIAAFLCIAIG 430
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
82-468 2.76e-31

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 127.50  E-value: 2.76e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  82 VAIMLLVITTISTLVHVFSTAYMLGDpHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFW--LTRVe 159
Cdd:COG1008    83 ISLPLVLLTALLTPLAILASWNEIKK-RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRI- 160
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 160 anKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSsLFNMVVVSAPSSDITLICLLLFIG-AVgKSAQLGLHTWLPDA- 237
Cdd:COG1008   161 --YAAIKFFLYTLAGSLLMLVAILALYFLAGALTFD-IAELAAAPLPLTAQLLLFLAFFIAfAV-KVPMFPFHTWLPDAh 236
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 238 MEGPTPVSAlIHAATMVTAGVFLLIR-SSPFFEQAPLALMTVTIV-GSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMV 315
Cdd:COG1008   237 VEAPTAGSV-LLAGVLLKMGGYGLLRfALPLFPEASAYFAPLLAAlGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVL 315
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 316 VACG-LSHYSIS--LFHLMNHAFFKALLFLSAGSVIHALSDeQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYS 392
Cdd:COG1008   316 LGIFaLNPLGLQgaVLQMVSHGLITAALFLLVGVLYDRTHT-RDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1535790704 393 KDLILELAFeQYYLTFAYwLGSFSALLTTLYSIRLVYLTFLSNTNSRKAIFRRVhegSWNLVLPLIILALGSLFVG 468
Cdd:COG1008   395 EFLVLLGAF-QVNPWLAI-LAALGLILTAAYLLWMYQRVFFGPLKEELAELPDL---NPRELAVLAPLAALILLLG 465
PRK06589 PRK06589
putative monovalent cation/H+ antiporter subunit D; Reviewed
75-478 3.86e-31

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235835 [Multi-domain]  Cd Length: 489  Bit Score: 127.24  E-value: 3.86e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  75 GLQFDSLVAIMLLVITTISTLVHVFSTAYMLGD--PHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLIN 152
Cdd:PRK06589   78 GLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIG 157
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 153 FWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSlfnmvvVSAPSSDITLICLLLFIGAVGKSAQLGLHT 232
Cdd:PRK06589  158 HTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVS------GGLFSKNQSIILLLMFIYGIAKTAIFPVHS 231
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 233 WLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPF-----FEQAPLALMTVTI-VGSLTVLFAATVGVIQNDLKKVIAYS 306
Cdd:PRK06589  232 WLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifglsYLQRIFAEFNWLIfIPIVSIFYSSLKALKTDNIKKILAYS 311
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 307 TCSQLGYMVV-ACGLSHYS--ISLFHLMNHAFFKALLFLSAGSvIHALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMG 383
Cdd:PRK06589  312 TISQLSLALLsAFILTPKAlgAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIG 390
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 384 FPYLTGFYSKDLILELAFEQ---YYLTFAYWLGSFSALLTTLYSIRLVYLTFLSNTNSRKAIFRRVHEGswnlVLPLIIL 460
Cdd:PRK06589  391 IPIFSGFISKFLILLAASEQnqpWLSIIVMLVVIASSILSALYLLKILSSIYKPSLSENSFITKSLPYL----MQISVIT 466
                         410
                  ....*....|....*...
gi 1535790704 461 ALGSLFVGYLAKEVVWSF 478
Cdd:PRK06589  467 CCCALTLFYFIQILIREF 484
PRK08377 PRK08377
NADH dehydrogenase subunit N; Validated
81-468 4.38e-28

NADH dehydrogenase subunit N; Validated


Pssm-ID: 181406 [Multi-domain]  Cd Length: 494  Bit Score: 117.95  E-value: 4.38e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  81 LVAIMLLVITTISTLVHVFSTAYMLGDPhiprFMSYLSFFTFLMVV---LVSSDNYLQLFIGWEGVGLCSYLLINFWLTR 157
Cdd:PRK08377   79 FAALFVLIIAIVSFIMSIFSLKAVEVEP----IDKYAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAYNKTG 154
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 158 vEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGAVgKSAQLGLHTWLPDA 237
Cdd:PRK08377  155 -EAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTIDPTVAQVGLALLIFGLAV-EAELFPLNAWAPDA 232
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 238 MEG-PTPVSALIhAATMVTAGVFLLIRSSPFFEQAP---LALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGY 313
Cdd:PRK08377  233 YQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGM 311
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 314 MVVACGL---SHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQdIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGF 390
Cdd:PRK08377  312 IALALALgtqAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVF 390
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1535790704 391 YSKDLILELAFEQYYlTFAYWLGSFSALLTTLYSIRLVYLTFLSNTNsrkaifRRVHEGsWNLVLPLIILALGSLFVG 468
Cdd:PRK08377  391 WSKFRIILAGLSAGY-TWPVALVLGASVVEAVYYFRLIHTMWFKGEG------ERIREN-AAIGIILLLLAALIVVIG 460
PRK06458 PRK06458
hydrogenase 4 subunit F; Validated
74-468 3.72e-27

hydrogenase 4 subunit F; Validated


Pssm-ID: 235805 [Multi-domain]  Cd Length: 490  Bit Score: 115.41  E-value: 3.72e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  74 FGLQF--DSLVAIMLLVITTISTLVHVFSTAYMLGDPH-----IPRFMSYLSF---FTFLMVVLVSSDNYLQLFIGWEGV 143
Cdd:PRK06458   61 AGLWFfiDDLNVFFLALIGVVGFLTSLYSIGYMRHEVEhgelsPVTLRLYYGMyqlFLFTMLLALTSNNLGLMWVAIEAT 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 144 GLCSYLLINFWLTRvEANKAAIKAMLVNRVGV----WGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSDITLICL---L 216
Cdd:PRK06458  141 TLSSALLVGIYRTR-ASLEAAWKYIIICSVGVafalFGTILVYANAATVMGDGEMAILWTELLKHASLLDPTLMKLafvF 219
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 217 LFIGAVGKSAQLGLHTWLPDA-MEGPTPVSA-----LIHAATMVTAGVFLLIRSSPFFEQAPLALMtvtIVGSLTVLFAA 290
Cdd:PRK06458  220 LLIGFGTKVGLFPMHAWLPDAhSEAPSPVSAllsgvLLNVALYAVLRYYILIDAAIGSDFPGRLLL---IFGLLSVLVAA 296
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 291 TVGVIQNDLKKVIAYSTCSQLGYMVVACGL-SHYSI--SLFHLMNHAFFKALLFLSAGSVIHAlSDEQDIRKMGGLIKLI 367
Cdd:PRK06458  297 FFLLRQRDIKRLFAYSSIEHMGLIAFALGIgGPLGIfaALLHMLNHSLTKSAIFFASGNVLQK-YGTRDINVIRGLLKVS 375
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 368 PLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFAYWLgsFSALLTTLYSI--RLVYLTFLSNTNSRKaifrr 445
Cdd:PRK06458  376 PLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILL--LLLLTLAFAALvrRVAGMVFGEPPEAVN----- 448
                         410       420
                  ....*....|....*....|...
gi 1535790704 446 VHEGSWNLVLPLIILALGSLFVG 468
Cdd:PRK06458  449 RGDLGWLTTSPMFVHLVLVLVLG 471
PRK07234 PRK07234
putative monovalent cation/H+ antiporter subunit D; Reviewed
119-497 2.14e-26

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235978 [Multi-domain]  Cd Length: 470  Bit Score: 112.74  E-value: 2.14e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 119 FFTFLMVVLVS------SDNYLQLFIGWEGVGLCSYLLINFWLTRvEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSL 192
Cdd:PRK07234   96 FYAQLLILHGSvnaafvCADLISLYVALEVLSIATFLLVAYPRTD-RAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTF 174
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 193 EFSSLFNmvvvsAPSSDITLIclllFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAP 272
Cdd:PRK07234  175 AFSGLAT-----ADPEAFALI----ALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLD 245
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 273 LAlmtVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLShysiSLFHLMnHAFFKALLFLSAGsVIHALS 352
Cdd:PRK07234  246 LI---VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG----GLYALA-HGLVKSTLFLCAG-ALPSRN 316
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 353 DEQDIRKMGGLIKLIPLTyimvvVGSLSLMGFPYLTGFYSKDLILElafeqYYLTFAYWLGSFSALLTTLYSIRLVYLTF 432
Cdd:PRK07234  317 FTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLK-----NLLPWQAIALNLAAVGTAASFWKFIFLPF 386
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1535790704 433 LSNTNSRKaifrrVHEGSWNlvlpLIILALGSLFVGYLAKEVVWSFQITFPPIVPIFIKLLPVFF 497
Cdd:PRK07234  387 SADDEDKK-----PLPGFWN----AIALLLGGLFLANGVYTEAYTLGNILKALLTIGLGWLPYFL 442
PRK08601 PRK08601
NADH dehydrogenase subunit 5; Validated
78-348 2.61e-25

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 236310 [Multi-domain]  Cd Length: 509  Bit Score: 109.74  E-value: 2.61e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  78 FDSLVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLIN---FW 154
Cdd:PRK08601   70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGlnkGW 149
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 155 ltRVEANKAAIKAMLVNrVGVWGLILAMFGLWDRFGSLEFSS-LFNMVVVSAPSSDITLICLLLFIGAVGKSAQLGLHTW 233
Cdd:PRK08601  150 --KVAREAAKISGMLFL-ISWLALALAIVWLFIATGEWQLTSvLSNENLAQLGTWEKTGINLLLILAVMIPAAQWPFQRW 226
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 234 LPDAMEGPTPVSALIHAAtMVTAGVFLLIRSSPFFEqAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGY 313
Cdd:PRK08601  227 LIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFH-DDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGF 304
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 1535790704 314 MVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVI 348
Cdd:PRK08601  305 MLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
NuoN COG1007
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...
76-468 1.49e-24

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440631 [Multi-domain]  Cd Length: 473  Bit Score: 107.12  E-value: 1.49e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  76 LQFDSLVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFL-MVVLVSSDNYLQLFIGWEGVGLCSYLLINFW 154
Cdd:COG1007    66 FVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFR 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 155 LTRVEANKAAIK---------AMLvnrvgVWGLILaMFGLwdrFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGAVG-K 224
Cdd:COG1007   146 RDDRRSSEAALKyfllgalssGFL-----LYGISL-LYGA---TGSLNLAGIAAALAAGGANSPLLLLGLVLVLAGLAfK 216
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 225 SAQLGLHTWLPDAMEG-PTPVSALIHAATMVtAGVFLLIR--SSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKK 301
Cdd:COG1007   217 LSAVPFHMWTPDVYEGaPTPVTAFLATAPKI-AAFAALLRllVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKR 295
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 302 VIAYSTCSQLGYM---VVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGS 378
Cdd:COG1007   296 MLAYSSIAHAGYLllgLAAGTPLGVSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFL 375
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 379 LSLMGFPYLTGFYSKDLILELAFEQYYltfaYWLGSFSALLTTL---YSIRLVYLTFLSNTNSRKAIfrrvhEGSWNLVL 455
Cdd:COG1007   376 LSLAGIPPTAGFFGKFYVFSAAVEAGL----YWLAVIAVLNSVIsayYYLRVVKAMYFDEPEEEAPI-----SAPPGLRV 446
                         410
                  ....*....|...
gi 1535790704 456 PLIILALGSLFVG 468
Cdd:COG1007   447 ALVIAALLVLLLG 459
PRK07691 PRK07691
putative monovalent cation/H+ antiporter subunit D; Reviewed
81-431 2.10e-23

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 181085 [Multi-domain]  Cd Length: 496  Bit Score: 103.88  E-value: 2.10e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  81 LVAIMLLVITTISTLVHVFSTAYMLGdphIPRFMSYLSFFTFLMVVLVS----SDNYLQLFIGWEGVGLCSYLLINFWLT 156
Cdd:PRK07691   77 MFAALLVLTSSIITFLVILYSFQTIG---IERERYYYYPSVLFMLAGVNgaflTGDIFNLFVFFEVMLMASYVLIVIGGT 153
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 157 RVEAnKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMV--VVSAPSSDITLICLLLFIGAVGKSAQLGLHTWL 234
Cdd:PRK07691  154 KIQL-RESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIaeLSAGQTGLITVVAILFLFVFATKAGLFPLYFWL 232
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 235 PDAMEGP-TPVSALIhAATMVTAGVFLLIRS-SPFFEQAP-LALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQL 311
Cdd:PRK07691  233 PGSYYAPpIAIAALF-GALLTKVGVYAIARTfTLFFSHDTsFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAV 311
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 312 GYMVVACGL---SHYSISLFHLMNHAFFKALLFLSAGSVIHaLSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLT 388
Cdd:PRK07691  312 GVILVGVAMmteSGMIGAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLS 390
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1535790704 389 GFYSKDLILELAFEQYYLTFAYwLGSFSALLtTLYSIRLVYLT 431
Cdd:PRK07691  391 GFYGKFFIVEGTFEAGFYVSGI-IVLLSSLL-VLYSVIKIFLK 431
PRK05777 PRK05777
NADH-quinone oxidoreductase subunit NuoN;
76-470 2.06e-22

NADH-quinone oxidoreductase subunit NuoN;


Pssm-ID: 235603 [Multi-domain]  Cd Length: 476  Bit Score: 100.67  E-value: 2.06e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  76 LQFDSLVAIMLLVITTISTLVHVFSTAYmLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWL 155
Cdd:PRK05777   69 LVVDGFALFLKGLILLASLLALLLARPY-LEDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRR 147
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 156 TRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGAVG-KSAQLGLHTWL 234
Cdd:PRK05777  148 DRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLFGLVFLLVGLAfKLSAVPFHMWT 227
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 235 PDAMEG-PTPVSALIHAATMVtAGVFLLIRsspFFEQAPLALMT-----VTIVGSLTVLFAATVGVIQNDLKKVIAYSTC 308
Cdd:PRK05777  228 PDVYEGaPTPVTAFLATAPKI-AAFAVLLR---LLVVAFGGLSEdwqqvLAIIAIASMLVGNLAALSQTNIKRLLAYSSI 303
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 309 SQLGYM---VVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFP 385
Cdd:PRK05777  304 AHAGYLlvgLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIP 383
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 386 YLTGFYSKDLILELAFEQYYLTFAYwLGSFSALLTTLYSIRLVYLTFLSNTNSRKAifrrVHEGSWNLVLPLIILALGSL 465
Cdd:PRK05777  384 PTAGFWGKFYVFEAAVEAGLWWLAV-IGVLNSAIGAFYYLRVIKLMYFDEPPRDAP----VNWPLSAGGAVLSVSALLVL 458

                  ....*
gi 1535790704 466 FVGYL 470
Cdd:PRK05777  459 VLGIF 463
PRK12663 PRK12663
Na+/H+ antiporter subunit D;
74-471 8.73e-22

Na+/H+ antiporter subunit D;


Pssm-ID: 237163 [Multi-domain]  Cd Length: 497  Bit Score: 98.87  E-value: 8.73e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  74 FGLQF--DSLVAIMLLVITTISTLVHVFSTAYMlgdPHIPRFMSYLSFFTFLMVVLVSS---DNYLQLFIGWEGVGLCSY 148
Cdd:PRK12663   69 FGIQFtgDSLSALMVTTASFVATAIMAYGFGDI---EHSGRRYGFPPFILLLMAGVIGSfltGDLFNLYVWFEVMLIASF 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 149 LLINFWlTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLfNMVVVSAPSSDITLICLLLFIGAVGKSAQL 228
Cdd:PRK12663  146 VLITLG-QEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHI-AMRLNDMGDTATLTTIALLFLLAFGMKAAL 223
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 229 GLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIR-SSPFFEQAPLALMTV-TIVGSLTVLFAATVGVIQNDLKKVIAYS 306
Cdd:PRK12663  224 FPFMWLPAAYHTPNTEVAALFAALLTKVGIYALIRvFTLLFPQERELLHPLlATMAAITMVIGALGALAYKDIRRIAGYQ 303
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 307 TCSQLGYMVVACGL---SHYSISLFHLMNHAFFKALLFLSAGSVIhALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMG 383
Cdd:PRK12663  304 VISSIGFILLGLALgtpAGINGAIFYLVHDMVVKTALFLIAGSLV-RLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGG 382
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 384 FPYLTGFYSKDLILELAFE--QYYLTFAYWLGSFsalLTTLYSIRLVYLTFLSNTNSRKAIFRRVHegsWNLVLPLIILA 461
Cdd:PRK12663  383 LPPFSGFWGKVLLVQGALDngAYILLALMLITSL---ITMYSLFRIFFLAYWGDKDGEEVNFKPIP---LYRKLPLSILA 456
                         410
                  ....*....|
gi 1535790704 462 LGSLFVGYLA 471
Cdd:PRK12663  457 VVVIAMGIAA 466
NDH_I_M TIGR01972
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ...
82-463 5.82e-21

proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273903 [Multi-domain]  Cd Length: 481  Bit Score: 96.16  E-value: 5.82e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  82 VAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLqLFIGWEGVGLCSYLLINFW--LTRVe 159
Cdd:TIGR01972  78 ISLLLVLLTALLTLLAILASWESIQKRVKEFYALLLLLEAGVIGVFLALDLFL-FYVFWEAMLIPMYLLIGVWggPNRI- 155
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 160 anKAAIKAMLVNRVGVWGLILAMFGLWdrFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGAVGKSAQLGLHTWLPDAM- 238
Cdd:TIGR01972 156 --YAAMKFFLYTLAGSLLMLLAILGLY--FLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHv 231
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 239 EGPTPVSALIHAATMVTAGVFLLIRSSPFFEQAPLALMTVTIV-GSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVV- 316
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAAlGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLg 311
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 317 --ACGLSHYSISLFHLMNHAFFKALLFLSAGsVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKD 394
Cdd:TIGR01972 312 ifSFNELGISGAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 395 LILELAFEQYYLTFAywLGSFSALLTTLYSIRLVYLTFLSN-TNSRKAIFRRVHEGSWNLVLPLIILALG 463
Cdd:TIGR01972 391 LILLGSFKVNPVVAF--LAALGIVLAAAYMLTLYKRVFFGElSNPEVAEFPDLNGREIAVLAPLVVLILF 458
PRK05846 PRK05846
NADH:ubiquinone oxidoreductase subunit M; Reviewed
123-462 6.32e-20

NADH:ubiquinone oxidoreductase subunit M; Reviewed


Pssm-ID: 235622 [Multi-domain]  Cd Length: 497  Bit Score: 93.34  E-value: 6.32e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 123 LMVVLVSSDNYLQLFIGWEGVGLCSYLLINFW--LTRVeanKAAIKAMLVNRVGVWGLILAMFGLW----DRFGSLEFSS 196
Cdd:PRK05846  123 GVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWggKNRI---YAATKFFLYTLLGSLLMLVAIIYLVvvyyNATGTFDIAD 199
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 197 LFNMVVvsaPSSDITLICLLLFIGAVGKSAQLGLHTWLPDAM-EGPTPVSaLIHAATMVTAGVFLLIR-SSPFFEQAPLA 274
Cdd:PRK05846  200 LLNLPL---PPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHvQAPTAGS-VLLAGILLKMGAYGLLRfSLPLFPDASHE 275
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 275 LMTVTIVGSL-TVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSH---YSISLFHLMNHAFFKALLFLSAGSVIHA 350
Cdd:PRK05846  276 FAPIIITLGViAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNqlgIQGAIFQMISHGLSSAALFLLVGVLYDR 355
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 351 LSDEqDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFAywLGSFSALLTTLYSIRLVYL 430
Cdd:PRK05846  356 LHTR-DIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAF--IATTGLILAAVYSLWLYQR 432
                         330       340       350
                  ....*....|....*....|....*....|..
gi 1535790704 431 TFLSNTNSRKAIFRRVHEGSWNLVLPLIILAL 462
Cdd:PRK05846  433 VMFGPVKNEVAKLKDLNGRELLILLPLVALLL 464
NDH_I_N TIGR01770
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ...
85-468 2.07e-19

proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]


Pssm-ID: 273795 [Multi-domain]  Cd Length: 468  Bit Score: 91.55  E-value: 2.07e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  85 MLLVITTISTLVHVFSTAYmLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAA 164
Cdd:TIGR01770  77 LILLLSTLLTFFFALSYLS-KEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAG 155
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 165 IKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGAVG-KSAQLGLHTWLPDAMEG-PT 242
Cdd:TIGR01770 156 LKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNISLLLLGIVLILVGLLfKLSAVPFHMWVPDVYEGaPT 235
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 243 PVSALIHAATMVTA-GVFLLIRSSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYmVVACGLS 321
Cdd:TIGR01770 236 PVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGY-ILIGLLA 314
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 322 HYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQD-----IRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLI 396
Cdd:TIGR01770 315 GTLEGIKAVLFYIFIYALMSLGAFGVLSLLRSYKDewieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYV 394
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1535790704 397 LELAFEQYYLTFAYwLGSFSALLTTLYSIRLVYLTFLSNTNSRkaifRRVHEGSWNLVLPLIILALGSLFVG 468
Cdd:TIGR01770 395 FFALLKSGLYWLAV-IAVLTSVIGAFYYLRVVKVMYFDKPERR----IPSNPQSKAQSLLLSISALFILFLG 461
ND5 MTH00063
NADH dehydrogenase subunit 5; Provisional
30-482 4.39e-19

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214414 [Multi-domain]  Cd Length: 522  Bit Score: 90.71  E-value: 4.39e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  30 LLTSSCLIISLSWSVLIFYEIILSYSTTHIKLWRWLdsdlltvyFGLQFDSLVAIMLLVITTISTLVHVFSTAYMLGDPH 109
Cdd:MTH00063    3 LLVSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWL--------INFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYA 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 110 IPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEAnKAAIKAMLVNRVGVWGL-ILAMFGLWDR 188
Cdd:MTH00063   75 SFLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSL-RASVVTLVSSRFGDVCLfLLIGLSCWGG 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 189 FGSLEFSSLFNMVVVSapssditliclllfigavgKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSS--P 266
Cdd:MTH00063  154 SGSFLCCLFFFLIVFT-------------------KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDylL 214
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 267 FFEQAPLALMTVTIvgsLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGS 346
Cdd:MTH00063  215 GFSWLSIFFSVLLL---LTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGD 291
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 347 VIHALSDEQDIRKM--GGLIKLIPLTYIMVVVGSLSlmGFPYLTGFYSKDLILELAFEQYYLTFAYWLGSFSALLTTLYS 424
Cdd:MTH00063  292 VMSGSGGSQSSNCVysSILYGSWNLFYLFLLVLGLS--GVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYS 369
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 425 IRLVYLtFLSNTNSRKAIFRRVHEGSWNLVLPLIILA--LGSLFVGYLAKEVVWSFQITF 482
Cdd:MTH00063  370 FRLCLI-LFGVKSSLSSGVRFLFFNSGLMVFLWLFINyyVFLLLDEVVYLGVFISLVLLL 428
PRK06277 PRK06277
energy conserving hydrogenase EhbF;
78-427 3.85e-17

energy conserving hydrogenase EhbF;


Pssm-ID: 235767 [Multi-domain]  Cd Length: 478  Bit Score: 84.31  E-value: 3.85e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  78 FDSLVAIMLLVITTISTLVhVFStayMLGDPHIPRFMSYLSFFTFLMVV-LVSSDNYLQLFIGWEGVGLCSYLLInfWLT 156
Cdd:PRK06277   70 FNPAKQIIIFVLSLIASLV-LIT---GLGEKKSSGLYVFLMLMGLASVSaIVLADDIFNLYVFFEIAAIVQVGLV--IAS 143
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 157 RVEAN-KAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGAVGKSAQLGLHTWLP 235
Cdd:PRK06277  144 GTEEAyKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTIKS 223
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 236 DAMEGPTP-VSALIHAATMVTAGVFLLIRSSPFFEQA--PLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLG 312
Cdd:PRK06277  224 DIYAKAKPfGSALLQTFSKFVLVALMLVIFKLFGGLSyfPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGG 303
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 313 YMVVACGL-SHYSIS--LFHLMNHAFFKALLFLSAGSVIHaLSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTG 389
Cdd:PRK06277  304 YVAAGLALgTPLGIVagIFHAINHVIYKSALFLGAGIVSY-RTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNG 382
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1535790704 390 FYSKDLILELAFEQYYLTFAYWL-----GSFSALLTTLYSIRL 427
Cdd:PRK06277  383 FQSKLMLAQAAMQANMPELAIIMiivsiGTFVSMMKAFYLIYL 425
PRK08042 PRK08042
formate hydrogenlyase subunit 3; Reviewed
172-390 4.98e-16

formate hydrogenlyase subunit 3; Reviewed


Pssm-ID: 181206 [Multi-domain]  Cd Length: 593  Bit Score: 81.41  E-value: 4.98e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 172 RVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGAVGKsaqLGLHTWLPDAMEGPTPVSALIHAA 251
Cdd:PRK08042  144 RLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGI---IPLHGWVPQAHANASAPAAALFST 220
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 252 TMVTAGVFLLIRSSPFFEQAPLAL-MTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHYSIS---- 326
Cdd:PRK08042  221 VVMKIGLLGILTLSLLGGNAPLWWgVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIAleqp 300
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1535790704 327 ----------LFHLMNHAFFKALLFLSAGSVIHAlSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGF 390
Cdd:PRK08042  301 alialglvggLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 373
PRK12662 PRK12662
putative monovalent cation/H+ antiporter subunit D; Reviewed
76-468 1.04e-15

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 183662 [Multi-domain]  Cd Length: 492  Bit Score: 80.16  E-value: 1.04e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  76 LQFDSLVAIMLLV---ITTISTLVHVFSTAYMLGDPHIPRFMS-YLSFFTFLMVVLVSSDNYlQLFIGWEGVGLCSYLLI 151
Cdd:PRK12662   72 LRVDILSATMLVLvnfIAVMSVLYGIYPNRKEISVNKIPSFYSaFLLCLGGLLGILVSNDVF-NIYVFLEISSISSYVLV 150
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 152 NFWLTRvEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGAVGKSAQLGLH 231
Cdd:PRK12662  151 AMGRDK-KALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFH 229
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 232 TWLPDAM-EGPTPVSALIhAATMVTAGVFLLIR-------SSPFFEQAPLALMTVtIVGSLTVLFAATVGVIQNDLKKVI 303
Cdd:PRK12662  230 KWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRivydvfkANFVFTTLPFNNVFM-ILAALAIVFGSVLAILSKDIKRIF 307
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 304 AYSTCSQLGYMVVACGLSHYS---ISLFHLMNHAFFKALLFLSAGSVIHALsDEQDIRKMGGLIKLIPLTYIMVVVGSLS 380
Cdd:PRK12662  308 AYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLS 386
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 381 LMGFPYLTGFYSKDLILELAFEQYYLT--FAYWLGSFSALlttLYSIRLVYLTFLSNTNSRKAIFRRVHEGSWNLVLPLI 458
Cdd:PRK12662  387 LIGMPPTSGFVAKWYILDAFIKSNAWIglVVLLVGSGLSV---IYVWKIVEALYFESRMVESKANDKAFKTPNAMVLCIW 463
                         410
                  ....*....|
gi 1535790704 459 ILALGSLFVG 468
Cdd:PRK12662  464 IMAILSIIVG 473
ndhB CHL00049
NADH dehydrogenase subunit 2
61-482 7.07e-15

NADH dehydrogenase subunit 2


Pssm-ID: 176990 [Multi-domain]  Cd Length: 494  Bit Score: 77.35  E-value: 7.07e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  61 LWRWLDSDLLTVYFGLQFDSLVAIMLLVITTISTLVHVFSTAYML-GDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIG 139
Cdd:CHL00049   60 LFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVA 139
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 140 WEGVGLCSYLLINFWLTRVEANKAAIKAMLVNrvGVWGLILA-----MFGLwdRFGSLEFSSLFNMVV----VSAPSSDI 210
Cdd:CHL00049  140 LECLSLCSYLLSGYTKKDVRSNEATMKYLLMG--GASSSILVygfswLYGL--SGGEIELQEIVNGLIntqmYNSPGISI 215
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 211 TLICLLLFIGAvgKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVtAGVFLLIRSS----PFFEQAPLALmtVTIVGSLT 285
Cdd:CHL00049  216 ALIFITVGIGF--KLSLAPFHQWTPDVYEGsPTPVVAFLSVTSKV-AASALATRIFdipfYFSSNEWHLL--LEILAILS 290
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 286 VLFAATVGVIQNDLKKVIAYSTCSQLGYMVVA--CGLSHYSIS------LFHL-MN-HAFFKALLF-LSAGSvihalsde 354
Cdd:CHL00049  291 MILGNLIAITQTSMKRMLAYSSIGQIGYVIIGiiVGDSNDGYAsmitymLFYIfMNlGTFACIVLFgLRTGT-------- 362
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 355 QDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKdLILELAFEQYYLTFAYWLGSFSALLTTLYSIRLVYLTFLs 434
Cdd:CHL00049  363 DNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK-LYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMT- 440
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1535790704 435 nTNSRKAIFRRVHEGSWNLV------LPLIILALGSLFVGYLAKEVVWSFQITF 482
Cdd:CHL00049  441 -GRNQEITPYVRNYRRSPLRsnnsieLSMIVCVIASTIPGISMNPIIAIAQDTL 493
PRK07363 PRK07363
NADH-quinone oxidoreductase subunit M;
30-468 5.32e-14

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 180945 [Multi-domain]  Cd Length: 501  Bit Score: 74.75  E-value: 5.32e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  30 LLTSSCLIISLSWSVLIFYEIILSYSTTHIKLWR-WLDSdlLTVYFGLQFDSLvAIMLLVITTISTLVHVFSTAYMLGDP 108
Cdd:PRK07363   30 QITLVFAVLVLAWSLFLLTQFDLSDPGMQFQEYLpWNEP--LGLSYSLGVDGL-SLPLLVLNSLLTWIAIYSIGENTERP 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 109 HIprFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEAnKAAIKAMLVNRVGVWGLILAMFGLWDR 188
Cdd:PRK07363  107 RL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRG-YASIKFLIYTAVSGLLVLAAFLGIVWL 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 189 FGSLEFSslFNMVVVSAPSSDITLICL-LLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRS--S 265
Cdd:PRK07363  184 SGSTSFD--YDAISTQNLSLNTQLILLtGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFglQ 261
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 266 PFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLShYSISLF----HLMNHAFFKALLF 341
Cdd:PRK07363  262 LFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG-TQLSLLgavaQMISHGLILALLF 340
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 342 LSAGsVIHALSDEQDIRKMGGL---IKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYylTFAYWLGSFSAL 418
Cdd:PRK07363  341 HLVG-IVERKVGTRDLDVLNGLmnpIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTF--PIPTLLCIVASG 417
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|
gi 1535790704 419 LTTLYSIRLVYLTFLSNTNSRKAIFRRVhegSWNLVLPLIILALGSLFVG 468
Cdd:PRK07363  418 LTAVYFVILLNRTCFGRLDNKLAYYPKV---LWSEKIPALILTALILFLG 464
PRK12561 PRK12561
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
120-392 5.81e-14

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 237137 [Multi-domain]  Cd Length: 504  Bit Score: 74.68  E-value: 5.81e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 120 FTFLMVVLVS-------SDNYLQLFIGWEGVGLCSYLLINFWLTRvEANKAAIKAMLVNRVGVWGLILAMFGLwdRFGSL 192
Cdd:PRK12561   89 FYFLMLVLYSaqigvflAQDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIFILVAGLAL--ALSGD 165
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 193 EFSslFNMVVVSAPSSDIT--LICLLLFIGAVG-KSAQLGLHTWLPDAM-EGPTPVSalihaatMVTAGVFL------LI 262
Cdd:PRK12561  166 TFT--FDLAELGAKSYPLAleLLLYAGFLIAFGvKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaLI 236
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 263 R-SSPFFEQAPLALMTVTIV-GSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACG-LSHYSIS--LFHLMNHAFFK 337
Cdd:PRK12561  237 RfNVQMLPDAHVYFAPALAIlGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAaFTDLGISgaMLQMISHGLIA 316
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1535790704 338 ALLFLSAGSV---IHALSdeqdIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYS 392
Cdd:PRK12561  317 AALFFLTGVTyerTHTLS----IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
PRK12665 PRK12665
putative monovalent cation/H+ antiporter subunit D; Reviewed
79-429 2.04e-13

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237165 [Multi-domain]  Cd Length: 521  Bit Score: 73.08  E-value: 2.04e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  79 DSLVAIMLLVITTISTLVHVFSTAYML--GDPHIPrfmsyLSFF--TFLMVVLVSSDNYL-----QLFIGWEGVGLCSYL 149
Cdd:PRK12665   75 DRLSALMLVVSSVVLLAVLVYAIGQGIrdGDEEQP-----VSIFlpTYLILVAGVSNAFLagdlfNLYVGFEILLVASYV 149
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 150 LINFWLT--RVEANKAAIKAMLVNRVgvwgLILAMFGL-WDRFGSLEFSSLfNMVVVSAPSSDITLICLLLFIGAVGKSA 226
Cdd:PRK12665  150 LLTLGATaaRVRAGVTYVMVSMVSSL----LFLIGIALvYAATGTLNMADL-AVRLDELPSGTRTALFAVLLVAFGIKAA 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 227 QLGLHTWLPDAM-EGPTPVSAlIHAATMVTAGVFLLIRS-SPFFEQAPL--ALMtvtIVGSLTVLFAATVGVIQNDLKKV 302
Cdd:PRK12665  225 VFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRThTLLFPGGGLdtLLM---VVALLTMVVGILGAIAQSDIKRL 300
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 303 IAYSTCSQLGYMVVACGLSH---YSISLFHLMNHAFFKALLFLSAGsVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGSL 379
Cdd:PRK12665  301 LSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPAL 379
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1535790704 380 SLMGFPYLTGFYSKDLILELAFEQ-YYLTFAYWLGSFSALLTTLYSIRLVY 429
Cdd:PRK12665  380 NLGGIPPFSGFIGKVALLEAGAEDgTWLAWALVAGGVVTSLLTLYAVARVW 430
PRK08676 PRK08676
hydrogenase membrane subunit; Validated
206-397 3.12e-13

hydrogenase membrane subunit; Validated


Pssm-ID: 181537 [Multi-domain]  Cd Length: 485  Bit Score: 72.09  E-value: 3.12e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 206 PSSDITLICLLLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFLLIRSSPFFEQ---APLALMTVTIV 281
Cdd:PRK08676  201 SPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQsgaAEQFSNVLIGL 279
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 282 GSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSH---YSISLFHLMNHAFFKALLFLSAGsVIHALSDEQDIR 358
Cdd:PRK08676  280 GIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTplaLFWMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFD 358
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1535790704 359 KMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLIL 397
Cdd:PRK08676  359 RIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
PRK06473 PRK06473
NADH-quinone oxidoreductase subunit M;
64-468 6.71e-13

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 235810 [Multi-domain]  Cd Length: 500  Bit Score: 71.27  E-value: 6.71e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  64 WLDSdlLTVYFGLQFDSLvAIMLLVITTISTLVHVFSTaymlgDPHIPRFMSYLSFFTFLMVVLVS---SDNYLQLFIGW 140
Cdd:PRK06473   65 WIDS--LGLSYHLGVDGL-SLPLLVLNSLLTLIAIYSS-----DESIQRPRFYYSLLLLLNAGVSGaflAQDLLLFFLFY 136
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 141 EGVGLCSYLLINFWlTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSsLFNMVVVSAPSSDITLICLLLFIG 220
Cdd:PRK06473  137 ELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFD-YEPLRSHTLPLSTQLLLLAPILVG 214
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 221 AVGKSAQLGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFLLIR--SSPFFEQAPLALMTVTIVGSLTVLFAATVGVIQN 297
Cdd:PRK06473  215 FGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRfgVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQK 293
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 298 DLKKVIAYSTCSQLGYMVVACGLS-HYSI--SLFHLMNHAFFKALLFLSAGsVIHALSDEQDIRKMGGLI---KLIPLTY 371
Cdd:PRK06473  294 DMKKMVAYSSIGHMGYILLAAAAAtPLSIlaAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLnpeRGLPITG 372
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 372 IMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYL-TFAYWLGSFsalLTTLYSIRLVYLTFLSNTNSRKAIFRRVHegs 450
Cdd:PRK06473  373 SLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVqTLLCMIGTG---LTAVYFLLLVNRVFFGRLTAELSNLPRVL--- 446
                         410
                  ....*....|....*...
gi 1535790704 451 WNLVLPLIILALGSLFVG 468
Cdd:PRK06473  447 WSERLPALVLAVLIVVLG 464
Proton_antipo_N pfam00662
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ...
64-114 1.25e-12

NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.


Pssm-ID: 459895 [Multi-domain]  Cd Length: 51  Bit Score: 62.45  E-value: 1.25e-12
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1535790704  64 WLDSDLLTVYFGLQFDSLVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFM 114
Cdd:pfam00662   1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
PRK06459 PRK06459
hydrogenase 4 subunit B; Validated
92-461 2.45e-11

hydrogenase 4 subunit B; Validated


Pssm-ID: 235806 [Multi-domain]  Cd Length: 585  Bit Score: 66.35  E-value: 2.45e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  92 ISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFL-MVVLVSSDNYLQLFIGWEGVGLCSYLLInfWLTRvEANKAAIKAMLV 170
Cdd:PRK06459   52 ISTIVWILASLYSIEYDHYGKWLSSLYILTILgMAIVLTSDNYLLFLAGWEIMTIPSYVAI--ALTK-KNKRPAFVFMAF 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 171 NRVGVwGLILAmfglwdrfGSLEFSSLFNMVVVSAPSSDITLIclLLFIGAVGKSAQLGLH--TWLPDAMEGPTPVSALI 248
Cdd:PRK06459  129 GELST-VLILA--------GFAWAFIISGTTNFSYLPSPVPLI--LASFGFIIKMGMMPFLvsEWLPIAHGNAPSNFSAI 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 249 HAATMVTAGVFLLIRSSPFFEQAPLALMTVTI--VGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGL------ 320
Cdd:PRK06459  198 LSATMTLMGVYGILKMTILTQTIPIGYFGLTIlaIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymvtkq 277
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 321 -----SHYSIS--LFHLMNHAFFKALLFLSAGSVIHALSDEQDIRKMGgliklipLTYIMVVVGSLSLMGFPYLTGFYSK 393
Cdd:PRK06459  278 litsiEHFSLItvILYSFAHSVAKTGLFLSSGLQEKQSITYSKKIRNR-------WIELGLTLLASSLSGLLPNIGGVAS 350
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1535790704 394 DLILELAFEQYYLTFAYW------LGSFSALLTTLYSIRLV-YLTFLSNTNSRKAIFRRVHEGSWNLVLPLIILA 461
Cdd:PRK06459  351 WLLLESLFMFAYVLHNVIsilfivTGAIIAMGEGLATALLIkYITYTSLFRNTKEQLSKIKKYPILLSALIVLIL 425
ND4 MTH00204
NADH dehydrogenase subunit 4; Provisional
38-460 1.15e-10

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 164750 [Multi-domain]  Cd Length: 485  Bit Score: 63.93  E-value: 1.15e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  38 ISLSWSVLIFYEIILSYSTTH-------IKLWRWLDSDLLT-----VYFGLQFDSLVAIMLLVI-TTISTLVHVFSTAYM 104
Cdd:MTH00204   31 RALEWSLAILFSTLVLWGAFDgegqfqfINLIEWIISPTLNfqwgpLVFAVDGVSLFFILLTTLlIPICILISWKSIKFL 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 105 LGDphiprFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFG 184
Cdd:MTH00204  111 FKE-----FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQ 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 185 LWDRFGSLEFSSLFNMVVvsaPSSDITLICLLLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLLIR 263
Cdd:MTH00204  186 LYSITGTTDYQILLNIKL---PLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRF 262
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 264 SSPFFEQAPLALMTVTIV-GSLTVLFAATVGVIQNDLKKVIAYSTCSQLGymVVACGLSHYSI-----SLFHLMNHAFFK 337
Cdd:MTH00204  263 SWPLFPAASEYFAPLIVMlSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMG--LVPLGLFTHTIeglvaAVFLMLAHGFVS 340
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 338 ALLFLsAGSVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEqyYLTFAYWLGSFSA 417
Cdd:MTH00204  341 SALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFE--YSLGLGVLVTSGM 417
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|...
gi 1535790704 418 LLTTLYSIRLVYLTFLSNTNSRKAIFRRVHEGSWNLVLPLIIL 460
Cdd:MTH00204  418 VWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAILPLIIA 460
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
423-607 1.43e-10

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 60.64  E-value: 1.43e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 423 YSIRLVYLTFLSNTNSrkAIFRRVHEGSWNLVLPLIILALGSLFVGYLakeVVWS-FQITFPPIVPIFIKLLPVFFSLGG 501
Cdd:pfam06455   1 YSFRLIYYVMTGSPRF--SSLSPINENNPIMINPIKRLAIGSIIGGSL---LSWLiFPKPPMMTMPLYLKLLALLVTILG 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 502 aaLVIVLYFYSVHLFRVPSFMGRMGYTFLYSAWQFNYVLNYFLAKRVWRGGhQISYRTIDKGTLELVGPKGISNFLIGLT 581
Cdd:pfam06455  76 --LLLGLELSNLSNKQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLG-QKLAKQIDQGWSEKFGPQGIAKTLMTLS 152
                         170       180
                  ....*....|....*....|....*.
gi 1535790704 582 RGLSNLQAGQVFNYALVILIGVAIFI 607
Cdd:pfam06455 153 KIIQNSQKGLIKIYLLSFLLWLLLLL 178
ND2 MTH00070
NADH dehydrogenase subunit 2; Provisional
230-462 1.43e-08

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177142 [Multi-domain]  Cd Length: 346  Bit Score: 56.85  E-value: 1.43e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 230 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFfeqapLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCS 309
Cdd:MTH00070  111 FHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHL-----LNSNLLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIA 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 310 QLGYMVVACG----LSHYSISLFHLMNHAFFKALLFLSAGSvihalsdeqdIRKMG-GLIKLIPLTYIMVVVgSLSLMGF 384
Cdd:MTH00070  186 HLGWMIIILTfsphLTLLNLLIYLIMTSSMFLMLMNLNSTN----------INKLSsSWSKNPTLTSMMMLT-LLSLGGL 254
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 385 PYLTGFYSKDLILELAFEQYYLTFAYwLGSFSALLTTLYSIRLVY---LTFLSNTNSRKAIFRRVHEGSwNLVLPLIILA 461
Cdd:MTH00070  255 PPTTGFIPKWLILQELTKQNLTTLAT-LMALSALLSLFFYLRLSYamsLTTSPNTSNSKLYWRFKNKTN-NLLSLTIILS 332

                  .
gi 1535790704 462 L 462
Cdd:MTH00070  333 L 333
ND4 MTH00226
NADH dehydrogenase subunit 4; Provisional
113-401 9.65e-08

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214466 [Multi-domain]  Cd Length: 505  Bit Score: 54.93  E-value: 9.65e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 113 FMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSL 192
Cdd:MTH00226  133 FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTT 212
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 193 EFSSLFNMVVVsAPSSDITLICLLLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLLIRSSPFFEQA 271
Cdd:MTH00226  213 DYLTLASCSHV-VSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLG 291
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 272 PLALMTVTI-VGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACgLSHYSI----SLFHLMNHAFFKALLFLSAgS 346
Cdd:MTH00226  292 AQNLAPAVIaMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITL-VTHDIIgltgSIFIMLAHGIVSSLLFILV-T 369
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1535790704 347 VIHALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAF 401
Cdd:MTH00226  370 ILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSF 424
PRK02504 PRK02504
NAD(P)H-quinone oxidoreductase subunit N;
136-428 1.37e-07

NAD(P)H-quinone oxidoreductase subunit N;


Pssm-ID: 235044 [Multi-domain]  Cd Length: 513  Bit Score: 54.29  E-value: 1.37e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 136 LFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNR----VGVWGLILaMFGLwdRFGSLEFSSLFNMVVVSApsSDIT 211
Cdd:PRK02504  135 IFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAassaIFLYGSSL-LYGL--SGGSTQLSAIALALITSP--SLGL 209
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 212 LICLLLFIGAVG-KSAQLGLHTWLPDAMEG-PTPVSALIHAATMvTAGVFLLIR-----SSPFFEQAPLALmtvTIVGSL 284
Cdd:PRK02504  210 ALALVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRllvtaFPSFDEQWKLLF---TALAIL 285
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 285 TVLFAATVGVIQNDLKKVIAYSTCSQLGYMVV--ACGLSH-YSISLFHL-----MNHAFFKALLFLSagsvIHALSDEqd 356
Cdd:PRK02504  286 SMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIglVAGTEAgYASMVFYLlaylfMNLGAFACVILFS----LRTGTDQ-- 359
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 357 IRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKdlilelafeqYYLTFAYW---------LGSFSALLTTLYSIRL 427
Cdd:PRK02504  360 ISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK----------IYLFWAGWqaglyllvlVGLVTSVISIYYYIRV 429

                  .
gi 1535790704 428 V 428
Cdd:PRK02504  430 I 430
ND2 MTH00196
NADH dehydrogenase subunit 2; Provisional
119-470 2.75e-07

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214453 [Multi-domain]  Cd Length: 365  Bit Score: 53.11  E-value: 2.75e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 119 FFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSsLF 198
Cdd:MTH00196    1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLS-YI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 199 NMVVVSA--PSSDITLICLLLFIGAV-GKSAQLGLHTWLPDAMEG-PTPVSALIhaATMVTAGVFLLIRSspffeqAPLA 274
Cdd:MTH00196   80 NLVLNSGqsFSSVSVPIGYLLIIVALlFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSILVS------IGLN 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 275 LMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHY---SISLFHLMNHAFFKALLFlsagSVIHAL 351
Cdd:MTH00196  152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVF----SIILAL 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 352 SDEQD-IRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLI-LELAFEQYYLTFAywLGSFSALLTTLYSIRLVY 429
Cdd:MTH00196  228 NVYKNlIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIlLSGVVYQYYLIFL--LAVFCSVIAGVYYVRIVK 305
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1535790704 430 LTFLSNTNSRKAIFRRVHEGSWNLVLPLIILALGSLFVGYL 470
Cdd:MTH00196  306 ILFFQANSFLLISTKILKKENKINLRKALLIGFSLYLILFT 346
PRK02546 PRK02546
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
198-423 6.63e-07

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 235050 [Multi-domain]  Cd Length: 525  Bit Score: 52.40  E-value: 6.63e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 198 FNMVVVSAPSSDIT--LICLLLFIGAVG-KSAQLGLHTWLPDAM-EGPTPVSALIhAATMVTAGVFLLIR-SSPFFEQAP 272
Cdd:PRK02546  197 FDMTALAAKDFGLGfqLLCYAGLLIAYGvKLPIVPLHTWLPDAHgEATAPVHMLL-AGILLKMGGYALLRmNAGMLPDAH 275
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 273 LALMTVTIV-GSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGlSHYSI----SLFHLMNHAFFKALLFLSAGSV 347
Cdd:PRK02546  276 AQFAPLLIVlGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIG-SFTDLgtsgAMLQMISHGLIGASLFFLVGAT 354
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 348 ---IHALSDEQdirkMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSkDLILELAF---EQYYLTFAYWLGSFSA---L 418
Cdd:PRK02546  355 ydrTHTLMLDE----MGGVGQKMRKMFAMWTACSLASLALPGMSGFVA-ELMVFVGFatsDAYTLPFRVVVVFLAAvgvI 429

                  ....*
gi 1535790704 419 LTTLY 423
Cdd:PRK02546  430 LTPIY 434
PRK12664 PRK12664
putative monovalent cation/H+ antiporter subunit D; Reviewed
204-523 9.65e-07

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237164 [Multi-domain]  Cd Length: 527  Bit Score: 51.65  E-value: 9.65e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 204 SAPSSDITLICLLLFI-GAVGKSAQLGLHTWLPDAMEGPTPVSALIHAA--TMVTAGVFLLirsspFFEQAPLALMtvti 280
Cdd:PRK12664  136 QAQNGQYTGYCKLLFMlGLLINCACFPASSWVVDAYPAASNFGIIVLSLftTKVAALVLLL-----FFSGEEILLF---- 206
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 281 VGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSH-----YSISLFHLMNHAFFKALLFLSAGSVIHAlSDEQ 355
Cdd:PRK12664  207 LGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINR-TRKF 285
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 356 DIRKMGGLIKLiPLTYIMVVVGSLSLMGFPYLTGFYSKDLILEL--AFEQYYLTFAYWLGSFSALLTTLYSIRLVYLTFL 433
Cdd:PRK12664  286 NLNRVGGLFKM-SLEAMCCIIAILNMGAFPGTAGFVSKSLITHSidTAGLTLVLYKKLFLICSLLLFASVGLKFFWYAFI 364
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 434 SNTNSrKAIFRRVHEGSwnlVLPLIILALGSLFVGYLAKEVVWsfqITFPPIVPIFIKLLPVFFSLGGAALVIVLyFYSV 513
Cdd:PRK12664  365 SKSKS-KPEAEKVYIGS---KLSMIILVLICVVLGMFNSYLLF---YNLPSFVYTLKSVALQLGLILGTTLLFIC-LRKL 436
                         330
                  ....*....|
gi 1535790704 514 HLFRVPSFMG 523
Cdd:PRK12664  437 FLGRINFKMD 446
ndhD CHL00011
NADH dehydrogenase subunit 4
120-396 9.86e-07

NADH dehydrogenase subunit 4


Pssm-ID: 176954 [Multi-domain]  Cd Length: 498  Bit Score: 51.48  E-value: 9.86e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 120 FTFLMVV-------LVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEAnKAAIKAMLVNRVGVWGLILAMFGLwDRFGSL 192
Cdd:CHL00011  114 FYFLMLAmysgqigLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRL-YSATKFILYTAGGSIFLLIGVLGM-GLYGSN 191
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 193 EFSslFNMVVVSAPSSDITLICLL---LFIGAVGKSAQLGLHTWLPDamegpTPVSAliHAAT-MVTAGVFL------LI 262
Cdd:CHL00011  192 EPT--LNFETLANQSYPVALEILFyigFLIAYAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLI 262
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 263 RSSpfFEQAPLA-------LMtvtIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGlshySIS-------LF 328
Cdd:CHL00011  263 RIN--MELLPHAhsifspwLV---IVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIG----SITdtglngaIL 333
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1535790704 329 HLMNHAFFKALLFLSAGSV---IHALSDEQdirkMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLI 396
Cdd:CHL00011  334 QIISHGFIGAALFFLAGTSydrIRLVYLDE----MGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
ND2 MTH00112
NADH dehydrogenase subunit 2; Provisional
228-431 3.58e-06

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214423 [Multi-domain]  Cd Length: 346  Bit Score: 49.44  E-value: 3.58e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 228 LGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPffeQAPLALMTvtIVGSLTVLFAATVGVIQNDLKKVIA 304
Cdd:MTH00112  106 LGLapfHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSN---SLNPTLLL--TLAILSTLIGGWGGLNQTQLRKIMA 180
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 305 YSTCSQLGYMVV----ACGLSHYSISLFHLMNHAFFKALLFLSAGSvihalsdeqdIRKMGGLIKLIPLTYIMVVVGSLS 380
Cdd:MTH00112  181 FSSIAHLGWMIAiitySPKLTLLTFYIYILMTTPMFLTLNTTSTKT----------LKDMMTSWTKSPTLNTTLMLTLLS 250
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1535790704 381 LMGFPYLTGFYSKDLIL-ELAFEQyyLTFAYWLGSFSALLTTLYSIRLVYLT 431
Cdd:MTH00112  251 LAGLPPLTGFMPKWLILqELTKQN--MTPTATIMAMLSLLSLFFYLRLTYIS 300
ND2 MTH00011
NADH dehydrogenase subunit 2; Validated
108-399 4.04e-06

NADH dehydrogenase subunit 2; Validated


Pssm-ID: 164587 [Multi-domain]  Cd Length: 330  Bit Score: 49.01  E-value: 4.04e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 108 PHIPRFMSYLSFFTfLMVVlvSSDNYLQLFIGWEgVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWd 187
Cdd:MTH00011    6 PTMFLFSSTMTLGT-LMAL--SSNNWLFLWMGME-LNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMW- 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 188 rfgslefsslfnmvvvSAPSSDITLICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPf 267
Cdd:MTH00011   81 ----------------SFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTS- 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 268 feQAPLALMTvtIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLShYSISLFHLMNHAFFKALLFLSAGSV 347
Cdd:MTH00011  144 --HNILPMMT--SMAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFS-PSMAILYFMTYIIITTPLMLLFAYL 218
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1535790704 348 iHALSDEQDIRkmggLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILEL 399
Cdd:MTH00011  219 -NAFSTKFNSK----ISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIET 265
ND2 MTH00200
NADH dehydrogenase subunit 2; Provisional
189-460 5.61e-06

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177246 [Multi-domain]  Cd Length: 347  Bit Score: 48.81  E-value: 5.61e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 189 FGSLEFSSLFNMVVVSAPSSDITLICLLLFIgavgkSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSS 265
Cdd:MTH00200   72 FGGLLNAWTSGQWGISEMLGPLSETLILLAL-----ALKLGLapgHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLA 146
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 266 PffeqaPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLShysiSLFHLMNhaFFKALLFLSAG 345
Cdd:MTH00200  147 P-----ALNSNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS----PNLALLY--LLLYVIITLTV 215
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 346 SVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFAYWLGSfSALLTTLYSI 425
Cdd:MTH00200  216 FLLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLL-GSLLSLFFYL 294
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1535790704 426 RLVYLTFLSNTNSRKAIFRRVHEGSW-NLVLPLIIL 460
Cdd:MTH00200  295 RLSYLTLLTLSPNQINMMSSWRTKSNsNLLVGLLLL 330
ND2 MTH00144
NADH dehydrogenase subunit 2; Provisional
230-470 9.88e-06

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214432 [Multi-domain]  Cd Length: 328  Bit Score: 47.96  E-value: 9.88e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 230 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLirssPFFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCS 309
Cdd:MTH00144  103 FHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLL----SNFLDLYWLAYLLCVISVLSALVGSIGGLNQTQVRALLAYSSIS 178
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 310 QLGYMVVACGLShYSISLFHLMNHAFFKALLFLSAGSvihalSDEQDIRKMGGLIKLIPLTYIMVVVGsLSLMGFPYLTG 389
Cdd:MTH00144  179 HTGWMLVAILHG-SWLMWMYFLIYIVSSGFLFFSLWS-----GDSGSMKDLGSLKPSYKTGLSIISLL-LSLGGLPPFLG 251
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 390 FYSKDLILelafeQYYLTFAYWLGSFSALLTTLYSIrLVYLTFLSNTNSRKAIFRRVHEGSWNLVLPLIILALGSLFVGY 469
Cdd:MTH00144  252 FCSKLLVL-----ISSMESSPLLLILLLLLGSLISL-FFYLSVFFSSFLSSSKSKKSNSSKVLNSSIISLNLLGGLLFLL 325

                  .
gi 1535790704 470 L 470
Cdd:MTH00144  326 L 326
ND4 MTH00217
NADH dehydrogenase subunit 4; Provisional
38-427 4.17e-05

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214462 [Multi-domain]  Cd Length: 482  Bit Score: 46.58  E-value: 4.17e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  38 ISLSWSVLIFYEIILSYST-------THIKLWRWL---DSDLLTVYFGLQFDSLVAIMLL-VITTISTLVHVFSTAYMlg 106
Cdd:MTH00217   30 IALEWSLLTLTATILLWASfdgegqfQAIKKFEWIpgiEPVFGPVVFAVDGISIFFLILTaLLTPICILISWNSIKFL-- 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 107 dphIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLW 186
Cdd:MTH00217  108 ---IKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLY 184
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 187 DRFGSLEFSSLFNMVVVSAPSSditLICLLLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIhAATMVTAGVFLLIRSS 265
Cdd:MTH00217  185 SYAGTTDYQALCCLKIEKELQY---FIFLGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVIL-AGVLLKLGGYGFIRFS 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 266 -PFFEQA-----PLALmtvtIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGymVVACGLSHYSI-----SLFHLMNHA 334
Cdd:MTH00217  261 wPLLPEAseyfsPLIQ----TLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMG--LVTLGIFSHTIqglvaAIFLMLAHG 334
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 335 FFKALLFLsAGSVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAFEQYYLTFAywLGS 414
Cdd:MTH00217  335 LVSSALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGV--LAS 411
                         410
                  ....*....|...
gi 1535790704 415 FSALLTTLYSIRL 427
Cdd:MTH00217  412 LGMVLSAGYSIYL 424
ND2 MTH00135
NADH dehydrogenase subunit 2; Provisional
230-465 1.14e-04

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177193 [Multi-domain]  Cd Length: 347  Bit Score: 44.80  E-value: 1.14e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 230 LHTWLPDAMEGPTPVSALIhaatmvtagvfllirSSPFFEQAPLALM---------TVTIVGSLTVLFAATVGVIQNDLK 300
Cdd:MTH00135  111 LHFWLPEVLQGLDLTTGLI---------------LSTWQKLAPFALIlqiaptnptLLITLGLTSTLVGGWGGLNQTQLR 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 301 KVIAYSTCSQLGYMVVacgLSHYSISL-------FHLMNHAFFKALLFLSAGSVIH-ALSdeqdIRKMGGLIKLIPLTYi 372
Cdd:MTH00135  176 KILAYSSIAHLGWMIL---VLQFSPSLtllalltYIIMTSSAFLTFKLNSSTKINTlATS----WTKAPALTALTPLIL- 247
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 373 mvvvgsLSLMGFPYLTGFYSKDLIL-ELAFEQYYLTFAywLGSFSALLTTLYSIRLVY---LTFLSNTNSRKAIFRRVhe 448
Cdd:MTH00135  248 ------LSLGGLPPLTGFMPKWLILqELTKQDLPLTAT--LAALSALLSLYFYLRLSYamtLTISPNTLNGTTPWRLP-- 317
                         250
                  ....*....|....*..
gi 1535790704 449 gSWNLVLPLIILALGSL 465
Cdd:MTH00135  318 -STQLTLPLAISTTATL 333
ND4 MTH00068
NADH dehydrogenase subunit 4; Provisional
110-317 1.47e-04

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214417 [Multi-domain]  Cd Length: 458  Bit Score: 44.52  E-value: 1.47e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 110 IPRFMSYLSFFTFLMVVLV---SSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLW 186
Cdd:MTH00068   89 INRQRTYISMLIILQLTLIlafSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQ 168
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 187 DRFGSLEFSSLFNMVVVSAPSSDITL---ICLLLFIGavgKSAQLGLHTWLPDAMegptpVSALIhAATMVTAGVFL--- 260
Cdd:MTH00068  169 NSLGSLSLILLELMSPMQLMTYTNKIwwlACLLAFMV---KMPLYGLHLWLPKAH-----VEAPI-AGSMILAAVLLklg 239
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1535790704 261 ---LIRSSPFFEQAPLALMTVTIVGSLT-VLFAATVGVIQNDLKKVIAYSTCSQLGYMVVA 317
Cdd:MTH00068  240 gygILRISILLTPLSKELSYPFIILALWgVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAA 300
ND4 MTH00044
NADH dehydrogenase subunit 4; Validated
113-315 3.66e-04

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214411 [Multi-domain]  Cd Length: 458  Bit Score: 43.43  E-value: 3.66e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 113 FMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSL 192
Cdd:MTH00044   96 FISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSL 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 193 EFSSLFNMVVVSAPSSDITLICLLLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLIRSSPFFeQA 271
Cdd:MTH00044  176 SIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAILLKLGGYGLIRLINLF-SL 253
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1535790704 272 PLALMTVTIVGSLTVLFAATVGVI---QNDLKKVIAYSTCSQLGYMV 315
Cdd:MTH00044  254 PSANNISFILIVFCCWGALITSIIclrQTDLKALIAYSSVGHMSLVA 300
ND2 MTH00197
NADH dehydrogenase subunit 2; Provisional
114-433 5.15e-04

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177244 [Multi-domain]  Cd Length: 323  Bit Score: 42.35  E-value: 5.15e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 114 MSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEaNKAAIKAMLVNRVGVwglILAMFGLWDRFGSLE 193
Cdd:MTH00197    1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITE-NEGAMKYFLFQEFGS---ALLLMGGSLSFSNLY 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 194 FSSLFnmvvvsapssditliCLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFFeqapl 273
Cdd:MTH00197   77 LSLLS---------------VVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSF----- 136
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 274 alMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLSHySISLFHLMNHAFFKALLFLsagsvIHALSD 353
Cdd:MTH00197  137 --MGLLICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSP-SIFMLYYLIYFVIMFMLFL-----FLSKNN 208
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 354 EQDIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILELAfeqyyLTFAYWLGSF----SALLTTLYSIRLVY 429
Cdd:MTH00197  209 LSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSL-----LSSNISLITFmlilSTCFSLYYYLSLAY 283

                  ....
gi 1535790704 430 LTFL 433
Cdd:MTH00197  284 KSLI 287
ND4 MTH00014
NADH dehydrogenase subunit 4; Validated
37-315 6.73e-04

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214399 [Multi-domain]  Cd Length: 452  Bit Score: 42.42  E-value: 6.73e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  37 IISLSWSVLIFYEIILSYSTTHIKLWRWLDSDLLTVYFG------------LQFDSLVAIMLLVITTISTLVHVFSTAYM 104
Cdd:MTH00014    4 LIMPLISLLLLPLIKYPWSWALTFSTLLLLSLFTLLNLYpmsapysmftesLSSDMLSAPLITLTLWITALMILASFKIF 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 105 LGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFG 184
Cdd:MTH00014   84 QNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILL 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 185 LWDRFGSLEFSslfnMVVVSAPSSDITLICLLLFIGA-VGKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAGVFLLI 262
Cdd:MTH00014  164 IFYTNNSLSML----MSSMEPPSIYLMNLWWLITILAfMVKMPLYTVHLWLPKAhVEAPVAGS-MILAGILLKLGGYGLL 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1535790704 263 RSSPFFEQAPLALMTVTIvgSLTVLFAATVGVI---QNDLKKVIAYSTCSQLGYMV 315
Cdd:MTH00014  239 RMSSLFMHINKSLSAPFS--SISLVGAVITSLIcirQPDLKSLIAYSSVGHMGLMT 292
ND4 MTH00205
NADH dehydrogenase subunit 4; Provisional
74-317 1.14e-03

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214457 [Multi-domain]  Cd Length: 448  Bit Score: 41.89  E-value: 1.14e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  74 FGLQFDSLVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLVSSDNYLQLFIGWEGVGLCSYLLINF 153
Cdd:MTH00205   51 SSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILG 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 154 WLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGavgKSAQLGLHTW 233
Cdd:MTH00205  131 WGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLFLYWIFLMLAFLV---KLPMYFVHLW 207
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 234 LPDA-MEGPTpvsalihAATMVTAGVFL------LIR--------SSPFFEqaplALMTVTIVGSLTVLFaatVGVIQND 298
Cdd:MTH00205  208 LPKAhVEAPV-------SGSMILAGVLLklggygLIRitsmlyklNSNFSE----LFFSISLWGGVMTGM---ICLRQVD 273
                         250
                  ....*....|....*....
gi 1535790704 299 LKKVIAYSTCSQLGYMVVA 317
Cdd:MTH00205  274 LKSLIAYSSVGHMGLMVVG 292
ND2 MTH00041
NADH dehydrogenase subunit 2; Validated
116-398 1.33e-03

NADH dehydrogenase subunit 2; Validated


Pssm-ID: 177116 [Multi-domain]  Cd Length: 349  Bit Score: 41.45  E-value: 1.33e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 116 YLSFFTFLMVVLVSSDNYLQLFIGWEGVGLC--SYLLINFWLTRVEAnkaAIKAMLVNRVGVwGLIL--AMFGLWdrfgs 191
Cdd:MTH00041    9 LITSIILGTIIVISSNHWFLIWLGLELNTLSiiPILSSNFSPRSVEA---TIKYFLVQAFSA-AILLngALIQAW----- 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 192 lefssLFNMVVVSAPSSDITLICLLLFIGAvgksaQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPFf 268
Cdd:MTH00041   80 -----LSGSWSINGPLNTLSSIIITLALAL-----KLGLapcHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNL- 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 269 eqapLALMTVTIVGSLTVLFAATVGVIQNDLKKVIAYSTCSQLGYMVVACGLShYSISLFHLMNHAFFKALLFLSA--GS 346
Cdd:MTH00041  149 ----LNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYS-PNASIIMFLIYIIINTSIFLIGnnFS 223
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1535790704 347 VIHalsdeqdIRKMGGLIKLIPLTYIMVVVGSLSLMGFPYLTGFYSKDLILE 398
Cdd:MTH00041  224 LST-------LSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLY 268
ND4 MTH00206
NADH dehydrogenase subunit 4; Provisional
74-466 2.36e-03

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214458 [Multi-domain]  Cd Length: 450  Bit Score: 40.69  E-value: 2.36e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704  74 FGLQFDSlVAIMLLVITTISTLVHVFSTAYMLGDPHIPRFMSYLSFFTFLMVVLV---SSDNYLQLFIGWEGVGLCSYLL 150
Cdd:MTH00206   53 LYLSYDP-LSSPLVILSCWLLPLMFLASQNHMKNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLL 131
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 151 INFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLWDRFGSLefsSLFNMVVVSAPSSDITLICLLLFIGAVGKSAQLGL 230
Cdd:MTH00206  132 ITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSL---SLYILYFSKLTTWNNNLWWLACILAFLVKLPLYGV 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 231 HTWLPDA-MEGPTpvsalihAATMVTAGVFL------LIRSSP-FFEQAPLALMTVTIVGSLTVLFAATVGVIQNDLKKV 302
Cdd:MTH00206  209 HLWLPKAhVEAPV-------AGSMVLAGVLLklggygMMRIILiLGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSL 281
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 303 IAYSTCSQLGYMVVACgLSHYSISL---FHLM-NHAFFKALLFLSAGsVIHALSDEQDIRKMGGLIKLIPLTYIMVVVGS 378
Cdd:MTH00206  282 IAYSSVSHMSLVTAGI-LSGSPWGFkgaLLLMiAHGLVSSALFCLAN-LLYERSHTRTILGNRGLQMILPLLSFWWLLFF 359
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 379 LSLMGFPYLTGFYSKDLILELAFEQYYLTFayWLGSFSALLTTLYSIRLVYLTFLSNTNSRKAIFRRVHEGSWNLVLPLI 458
Cdd:MTH00206  360 LANLGLPPFPNLFGELLIITSLFSWSNFTL--PLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHL 437

                  ....*...
gi 1535790704 459 ILALGSLF 466
Cdd:MTH00206  438 FPVILLIL 445
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
110-315 9.64e-03

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 38.78  E-value: 9.64e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 110 IPRFMSYLSFFTFLMVVLV---SSDNYLQLFIGWEGVGLCSYLLINFWLTRVEANKAAIKAMLVNRVGVWGLILAMFGLW 186
Cdd:MTH00127   90 INRQRMYITLLTSLQIFLIlafGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQ 169
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1535790704 187 DRFGSLEFSSLFNMVVVSAPSSDITLICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSP 266
Cdd:MTH00127  170 NSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMV 249
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1535790704 267 FFEQAPLALMTVTIVGSL-TVLFAATVGVIQNDLKKVIAYSTCSQLGYMV 315
Cdd:MTH00127  250 MLDPLTKELSYPFIILALwGIIMTGSICLRQTDLKSLIAYSSVSHMGLVA 299
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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