|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
1-221 |
4.43e-70 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 213.49 E-value: 4.43e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 1 MMNNLFSIFDPSTSSMFSMNWTALCFWILVIPFPFWASYSLFLISWKTLLKKFFQEISNNVKTLKFKNIILFTVVFFIIV 80
Cdd:MTH00157 1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 81 FSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIETVSNLIRPITLSVRL 160
Cdd:MTH00157 81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2328367035 161 TANMISGHLLIHLLSSMMMIK-FSLFSLMFPIMMMLLVLESAVAIIQSFVFVTLMSLYLNEV 221
Cdd:MTH00157 161 AANMIAGHLLLTLLGNTGPSLsSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
5-220 |
4.17e-39 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 134.26 E-value: 4.17e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 5 LFSIFDPS--TSSMFSMNWTALCFWILVIPFPFWASYSL----FLISWKTLLKKFFQEISNNVKTLKFKNIILFTVVFFI 78
Cdd:TIGR01131 1 LFSQFDISpiTLFSLTLLSLILLLSLLIFLISSSLSRWLipsrWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 79 IVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIETVSNLIRPITLSV 158
Cdd:TIGR01131 81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2328367035 159 RLTANMISGHLLIHLLSSM--MMIKFSLFSLMFPIMMMLLVLESAVAIIQSFVFVTLMSLYLNE 220
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLlfSLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
67-219 |
2.87e-32 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 114.42 E-value: 2.87e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 67 KNIILFTVVFFIIVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIET 146
Cdd:cd00310 3 KYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIEL 82
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2328367035 147 VSNLIRPITLSVRLTANMISGHLLIHLLSSMMMIKFSLFSLM-FPIMMMLLVLESAVAIIQSFVFVTLMSLYLN 219
Cdd:cd00310 83 ISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLpLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
71-219 |
1.68e-18 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 80.23 E-value: 1.68e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 71 LFTVVFFIIVFSNLLGLL---PYVFTPSSHLLFSMFFSFPLWISLIVFSL-LNKFNKTMSHLVPLGSPIVLSFFMVLIET 146
Cdd:pfam00119 60 LLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIkKHGLGGYFKKLFVPPVPLPLVPLLLPIEI 139
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2328367035 147 VSNLIRPITLSVRLTANMISGHLLIHLLSSMMMIKFSLFSLMFPI----MMMLLVLESAVAIIQSFVFVTLMSLYLN 219
Cdd:pfam00119 140 ISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIppllGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
71-220 |
8.48e-17 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 75.49 E-value: 8.48e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 71 LFTVVFFIIVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIETVSNL 150
Cdd:COG0356 60 LLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKGLGGYLKHLFFPPFPWLAPLMLPIEIISEL 139
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2328367035 151 IRPITLSVRLTANMISGHLLIHLLSSMM-MIKFSLFSLMFPIMMMLlvLESAVAIIQSFVFVTLMSLYLNE 220
Cdd:COG0356 140 ARPLSLSLRLFGNMFAGHIILLLLAGLApFLLLGVLSLLLPVAWTA--FELLVGFLQAYIFTMLTAVYISL 208
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
1-221 |
4.43e-70 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 213.49 E-value: 4.43e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 1 MMNNLFSIFDPSTSSMFSMNWTALCFWILVIPFPFWASYSLFLISWKTLLKKFFQEISNNVKTLKFKNIILFTVVFFIIV 80
Cdd:MTH00157 1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 81 FSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIETVSNLIRPITLSVRL 160
Cdd:MTH00157 81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2328367035 161 TANMISGHLLIHLLSSMMMIK-FSLFSLMFPIMMMLLVLESAVAIIQSFVFVTLMSLYLNEV 221
Cdd:MTH00157 161 AANMIAGHLLLTLLGNTGPSLsSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
5-220 |
4.17e-39 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 134.26 E-value: 4.17e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 5 LFSIFDPS--TSSMFSMNWTALCFWILVIPFPFWASYSL----FLISWKTLLKKFFQEISNNVKTLKFKNIILFTVVFFI 78
Cdd:TIGR01131 1 LFSQFDISpiTLFSLTLLSLILLLSLLIFLISSSLSRWLipsrWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 79 IVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIETVSNLIRPITLSV 158
Cdd:TIGR01131 81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2328367035 159 RLTANMISGHLLIHLLSSM--MMIKFSLFSLMFPIMMMLLVLESAVAIIQSFVFVTLMSLYLNE 220
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLlfSLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLND 224
|
|
| ATP6 |
MTH00120 |
ATP synthase F0 subunit 6; Provisional |
43-220 |
4.76e-39 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177181 Cd Length: 227 Bit Score: 134.18 E-value: 4.76e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 43 LISWktLLKKFFQEISNNVKTLKFKNIILFTVVFFIIVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFN 122
Cdd:MTH00120 46 LQLW--LIKLITKQLMLPLNKKGHKWALILTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPT 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 123 KTMSHLVPLGSPIVLSFFMVLIETVSNLIRPITLSVRLTANMISGHLLIHLLSS----MMMIKFSLFSLMFPIMMMLLVL 198
Cdd:MTH00120 124 TSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGHLLIQLISTatlnLLPTMPTLSLLTLIILLLLTIL 203
|
170 180
....*....|....*....|..
gi 2328367035 199 ESAVAIIQSFVFVTLMSLYLNE 220
Cdd:MTH00120 204 ELAVAMIQAYVFVLLLSLYLQE 225
|
|
| ATP6 |
MTH00179 |
ATP synthase F0 subunit 6; Provisional |
1-220 |
2.38e-35 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177230 Cd Length: 227 Bit Score: 124.68 E-value: 2.38e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 1 MMNNLFSIFDPSTSSMFSMNWTAL-CFWILVIPFPFWASYSLFLISWKTLLKKFFQEISNNVKTLKFKNIILFTVVFFII 79
Cdd:MTH00179 1 MMLSMFDQFESPSLLGIPLLALALlLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 80 VFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIETVSNLIRPITLSVR 159
Cdd:MTH00179 81 LTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2328367035 160 LTANMISGHLLIHLLSS----MMMIKFSLFSLMFPIMMMLLVLESAVAIIQSFVFVTLMSLYLNE 220
Cdd:MTH00179 161 LTANITAGHLLMHLISSavfvLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
|
|
| ATP6 |
MTH00176 |
ATP synthase F0 subunit 6; Provisional |
1-221 |
2.04e-34 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214449 Cd Length: 229 Bit Score: 122.45 E-value: 2.04e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 1 MMNNLFSIFDPSTSSMFSM---NWTALCFWILVIPFPFWASYSLFLISWKTLLKKFFQEISNNVKTLKFKNIILFTVVFF 77
Cdd:MTH00176 1 MLVDLFSSFDPPNKNIFSMislSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 78 IIVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIETVSNLIRPITLS 157
Cdd:MTH00176 81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2328367035 158 VRLTANMISGHLLIHLLSSMMMIKFSLFSLMFPIMM----MLLVLESAVAIIQSFVFVTLMSLYLNEV 221
Cdd:MTH00176 161 VRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLivqiLYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
|
|
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
70-220 |
2.14e-33 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 119.59 E-value: 2.14e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 70 ILFTVVFFIIVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIETVSN 149
Cdd:MTH00132 71 LLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISL 150
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2328367035 150 LIRPITLSVRLTANMISGHLLIHLLSSMMmikFSLFSLMFPI-------MMMLLVLESAVAIIQSFVFVTLMSLYLNE 220
Cdd:MTH00132 151 FIRPLALGVRLTANLTAGHLLIQLIATAA---FVLLPLMPTVailtatlLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
|
|
| ATP6 |
MTH00035 |
ATP synthase F0 subunit 6; Validated |
3-220 |
2.36e-33 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177110 Cd Length: 229 Bit Score: 119.69 E-value: 2.36e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 3 NNLFSIFDPSTSSMFSMNWTALCF---WILVIPFPFWA---SYSLFLISWKTLLKKFFQEISNNVKTLkfknIILFTVVF 76
Cdd:MTH00035 5 NSIFGQFSPDTILFIPLTLLSSVIalsWLFFINPTNWLpsrSQSIWLTFRQEILKLIFQNTNPNTAPW----AGLLTTVF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 77 FIIVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIETVSNLIRPITL 156
Cdd:MTH00035 81 ILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIAL 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2328367035 157 SVRLTANMISGHLLIHLLSS---MMMIKFSLFSLMFPIMMMLLVLESAVAIIQSFVFVTLMSLYLNE 220
Cdd:MTH00035 161 GLRLAANLTAGHLLIFLLSTaiwELSNSPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
67-219 |
2.87e-32 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 114.42 E-value: 2.87e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 67 KNIILFTVVFFIIVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIET 146
Cdd:cd00310 3 KYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIEL 82
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2328367035 147 VSNLIRPITLSVRLTANMISGHLLIHLLSSMMMIKFSLFSLM-FPIMMMLLVLESAVAIIQSFVFVTLMSLYLN 219
Cdd:cd00310 83 ISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLpLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP6 |
MTH00005 |
ATP synthase F0 subunit 6; Provisional |
1-217 |
2.03e-31 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 164583 Cd Length: 231 Bit Score: 114.83 E-value: 2.03e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 1 MMNNLFSIFDPSTSSMF-----SMNWTALCFWILVIPFPFWASYSLFLISWKTLLKKFFQEISNNVKTLKFKNIILFTVV 75
Cdd:MTH00005 1 MLTDIFSSFDPATNSLFnnlssTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 76 FFIIVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIETVSNLIRPIT 155
Cdd:MTH00005 81 FTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPIT 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2328367035 156 LSVRLTANMISGHLLIHLL-----SSMMMIKFSLFSLMFpIMMMLLVLESAVAIIQSFVFVTLMSLY 217
Cdd:MTH00005 161 LSFRLAANMSAGHIVLSLIgiyaaSALFSSISSTILLIL-TQMGYILFEVGICLIQAYIFCLLLSLY 226
|
|
| ATP6 |
MTH00073 |
ATP synthase F0 subunit 6; Provisional |
1-220 |
3.72e-31 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177144 Cd Length: 227 Bit Score: 113.91 E-value: 3.72e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 1 MMNNLFSIFDPSTSSMFSMNWTALCFWILVIPFPF--WASYSLF-LISWktLLKKFFQEISNNVKTLKFKNIILFTVVFF 77
Cdd:MTH00073 1 MNLSFFDQFLSPTLLGIPLIMLAMLLPWLLFPTPTnkWLNNRLStLQIW--FLQNFTKQLMLPLNTPGHKWALILTSLMV 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 78 IIVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIETVSNLIRPITLS 157
Cdd:MTH00073 79 FLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALG 158
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2328367035 158 VRLTANMISGHLLIHLLSSMMMIKFSLF----SLMFPIMMMLLVLESAVAIIQSFVFVTLMSLYLNE 220
Cdd:MTH00073 159 VRLTANLTAGHLLIQLISTATLVLLPLMptvsILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
|
|
| ATP6 |
MTH00101 |
ATP synthase F0 subunit 6; Validated |
79-220 |
1.91e-30 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177163 Cd Length: 226 Bit Score: 111.97 E-value: 1.91e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 79 IVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIETVSNLIRPITLSV 158
Cdd:MTH00101 79 IGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAV 158
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2328367035 159 RLTANMISGHLLIHLLSS----MMMIKFSLFSLMFPIMMMLLVLESAVAIIQSFVFVTLMSLYLNE 220
Cdd:MTH00101 159 RLTANITAGHLLIHLIGGatlaLMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHD 224
|
|
| ATP6 |
MTH00173 |
ATP synthase F0 subunit 6; Provisional |
1-220 |
1.17e-29 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214448 Cd Length: 231 Bit Score: 109.96 E-value: 1.17e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 1 MMNNLFSIFDPSTSSMFSMNWTALCFWILVIpFPFWASYSLFLISWKTLLKKFFQEISNNVKTLKFKN----IILFTVVF 76
Cdd:MTH00173 1 MMVDLFSSFDDHNSSFSSLSFLMWLLSLMSL-FFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNlggfSLLLSSLF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 77 FIIVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIETVSNLIRPITL 156
Cdd:MTH00173 80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2328367035 157 SVRLTANMISGHLLIHLLSSMMMIKFSLFSLMFP-----IMMMLLVLESAVAIIQSFVFVTLMSLYLNE 220
Cdd:MTH00173 160 TVRLLANISAGHIVLTLIGNYLSSSLFSSSVVSLllvllIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
|
|
| ATP6 |
MTH00172 |
ATP synthase F0 subunit 6; Provisional |
53-220 |
9.37e-24 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214447 Cd Length: 232 Bit Score: 94.72 E-value: 9.37e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 53 FFQEISNNVKTLKFKNIILFTVVFFIIVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLG 132
Cdd:MTH00172 56 FHGVVKDNLGNEGLKYFPFIISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSG 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 133 SPIVLSFFMVLIETVSNLIRPITLSVRLTANMISGHLLIHLLSS--MMMIKFSLFSLMFPIMMMLLV--LESAVAIIQSF 208
Cdd:MTH00172 136 APLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGfgFNMLCASGFLSLFPLLIMVFItlLEIAVAVIQAY 215
|
170
....*....|..
gi 2328367035 209 VFVTLMSLYLNE 220
Cdd:MTH00172 216 VFCLLTTIYLAD 227
|
|
| ATP6 |
MTH00175 |
ATP synthase F0 subunit 6; Provisional |
76-218 |
1.39e-21 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177228 Cd Length: 244 Bit Score: 89.30 E-value: 1.39e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 76 FFIIVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIETVSNLIRPIT 155
Cdd:MTH00175 90 FLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAIS 169
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2328367035 156 LSVRLTANMISGHLLIHLLSSM---MMIKFSLFSLMFPIMMMLLV--LESAVAIIQSFVFVTLMSLYL 218
Cdd:MTH00175 170 LGVRLAANISAGHLLFAILSGFafnMLSNGLIILSLFPMLIMIFItlLEMAVAVIQAYVFCLLTTIYL 237
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
71-219 |
1.68e-18 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 80.23 E-value: 1.68e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 71 LFTVVFFIIVFSNLLGLL---PYVFTPSSHLLFSMFFSFPLWISLIVFSL-LNKFNKTMSHLVPLGSPIVLSFFMVLIET 146
Cdd:pfam00119 60 LLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIkKHGLGGYFKKLFVPPVPLPLVPLLLPIEI 139
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2328367035 147 VSNLIRPITLSVRLTANMISGHLLIHLLSSMMMIKFSLFSLMFPI----MMMLLVLESAVAIIQSFVFVTLMSLYLN 219
Cdd:pfam00119 140 ISEFARPVSLSLRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIppllGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
71-220 |
8.48e-17 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 75.49 E-value: 8.48e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 71 LFTVVFFIIVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIETVSNL 150
Cdd:COG0356 60 LLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKGLGGYLKHLFFPPFPWLAPLMLPIEIISEL 139
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2328367035 151 IRPITLSVRLTANMISGHLLIHLLSSMM-MIKFSLFSLMFPIMMMLlvLESAVAIIQSFVFVTLMSLYLNE 220
Cdd:COG0356 140 ARPLSLSLRLFGNMFAGHIILLLLAGLApFLLLGVLSLLLPVAWTA--FELLVGFLQAYIFTMLTAVYISL 208
|
|
| ATP6 |
MTH00174 |
ATP synthase F0 subunit 6; Provisional |
43-220 |
1.57e-14 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 133799 Cd Length: 252 Bit Score: 70.35 E-value: 1.57e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 43 LISWKTLLKKFFQEISNNVKTLKFKNIILFTVVFFIIVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFN 122
Cdd:MTH00174 65 LVGLELIYSHFYTVLKDNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 123 KTMSHLVPLGSPIVLSFFMVLIETVSNLIRPITLSVRLTANMISGHLLIHLLSSMMMIKFSLFSLM-----FPIMMMLLV 197
Cdd:MTH00174 145 NFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIgsfvpFAILIFVTI 224
|
170 180
....*....|....*....|...
gi 2328367035 198 LESAVAIIQSFVFVTLMSLYLNE 220
Cdd:MTH00174 225 LEMAVAIIQAYVFTLLTIVYLRD 247
|
|
| PRK05815 |
PRK05815 |
F0F1 ATP synthase subunit A; Validated |
71-220 |
4.98e-14 |
|
F0F1 ATP synthase subunit A; Validated
Pssm-ID: 235617 Cd Length: 227 Bit Score: 68.28 E-value: 4.98e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 71 LFTVVFFIIVFSNLLGLLP-YVFTPSSHLLFSMFFSFPLWISLIVFSL-LNKFNKTMSHLVPLGSPIvlsffMVLIETVS 148
Cdd:PRK05815 75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGIkKKGLGGYLKEFYLQPHPL-----LLPIEIIS 149
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2328367035 149 NLIRPITLSVRLTANMISGHLLIHLLSSMMMIKFSLFSLMFPIMMMLLVLESAVAIIQSFVFVTLMSLYLNE 220
Cdd:PRK05815 150 EFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISM 221
|
|
| PRK13419 |
PRK13419 |
F0F1 ATP synthase subunit A; Provisional |
75-218 |
3.56e-10 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237381 Cd Length: 342 Bit Score: 58.60 E-value: 3.56e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 75 VFFIIVFSNLLGLLPYVFTPSSHLLFSMFFS-FPLWISLIVFSLLNKFNKTMSHLVPlGSPIVLSFFMVLIETVSNLIRP 153
Cdd:PRK13419 177 VFFFILVCNLLGLVPYGATATGNINVTLTLAvFTFFITQYAAIKAHGIKGYLAHLTG-GTHWSLWIIMIPIEFIGLFTKP 255
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2328367035 154 ITLSVRLTANMISGHLLIhllSSMMMIKFSLFSLMF------PIMMMLLVLESAVAIIQSFVFVTLMSLYL 218
Cdd:PRK13419 256 FALTVRLFANMTAGHIVI---LSLIFISFILKSYIVavavsvPFAIFIYLLELFVAFLQAYIFTMLSALFI 323
|
|
| ATP6 |
MTH00087 |
ATP synthase F0 subunit 6; Provisional |
66-220 |
1.02e-09 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177152 Cd Length: 195 Bit Score: 56.14 E-value: 1.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 66 FKNIILFTVVFFIIVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFnkTMSHLVPLGSPIVLSFF-MVLI 144
Cdd:MTH00087 49 PLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSE--KFSVYLSKGSDSFLKTFsMLFV 126
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2328367035 145 ETVSNLIRPITLSVRLTANMISGHLLIHLLSSMMmikfslfSLMFPIMMMLLVLESAVAIIQSFVFVTLMSLYLNE 220
Cdd:MTH00087 127 EIVSELSRPLALTLRLTVNLMVGHLISSLLNFLG-------EKYVWLSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
|
|
| ATP6 |
MTH00050 |
ATP synthase F0 subunit 6; Validated |
71-189 |
2.75e-07 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177125 Cd Length: 170 Bit Score: 48.73 E-value: 2.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 71 LFTVVFFIIVFSNLLGLLPYVFTPSSHLLFSMFFSFPLWISLIVFSLLNKFNKTMSHLVPLGSPIVLSFFMVLIETVSNL 150
Cdd:MTH00050 25 YYSVVLFIVLFLFLLYRLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYI 104
|
90 100 110
....*....|....*....|....*....|....*....
gi 2328367035 151 IRPITLSVRLTANMISGHLLIHLLSSMMMIKFSLFSLMF 189
Cdd:MTH00050 105 IRPVVLILRPFINISLGCFGGVALGNLCFISYWWFLVLF 143
|
|
| PRK13417 |
PRK13417 |
F0F1 ATP synthase subunit A; Provisional |
123-218 |
9.33e-04 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237380 Cd Length: 352 Bit Score: 39.49 E-value: 9.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2328367035 123 KTMSHLVPLGSPIVLSFFMVLIE-TVSNLIRPITLSVRLTANMISGHLLIHLLSSMMMIKFSLFSLMFPIM--MMLLVLE 199
Cdd:PRK13417 247 KFIWHSVPNGVPLLLYPIMWPLEfIVSPMAKTFALTVRLLANMTAGHVIILALMGFIFQFQSWGIVPVSVIgsGLIYVLE 326
|
90
....*....|....*....
gi 2328367035 200 SAVAIIQSFVFVTLMSLYL 218
Cdd:PRK13417 327 IFVAFLQAYIFVLLTSLFV 345
|
|
| |
