|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00034 |
cytochrome b; Validated |
2-380 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 654.08 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 2 VGPIRKSHPILKVINSTFITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLR 81
Cdd:MTH00034 1 TGPLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 82 NIHANGASLFFVCLYVHIGRGLYYGSYKNFETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYL 161
Cdd:MTH00034 81 NIHANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 162 VQWVWGGFSVDNATLVRFFAFHFLLPFVIVAFSVIHLLFLHQSGSNNPTGINSNSDKVPFHVYYTIKDFLWFLVVITFLC 241
Cdd:MTH00034 161 VQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 242 FVAFFFPTVLNDPDNFVCANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILFFVPLFHTSSQQSKIFCPL 321
Cdd:MTH00034 241 SLALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPL 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 84488818 322 SQFVFWCLISCFFILTWLGGQPVESPYIELGQVASIFYFSIFLFWMPFVSYLENLFIFN 380
Cdd:MTH00034 321 SQIAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLIFS 379
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
25-374 |
3.00e-128 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 373.74 E-value: 3.00e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 25 PSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLRNIHANGASLFFVCLYVHIGRGLY 104
Cdd:COG1290 33 PKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFF 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 105 YGSYKNFE--TWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYLVQWVWGGFSVDNATLVRFFAF 182
Cdd:COG1290 113 YGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFAL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 183 H-FLLPFVIVAFSVIHLLFLHQSGSNNPTGI----NSNSDKVPFHVYYTIKDFLWFLVVITFLCFVAFFFPtvLNDPDNF 257
Cdd:COG1290 193 HvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP--INPPPNY 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 258 VCANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVLALLGAILILFFVPLFHTSSQQSKIFCPLSQFVFWCLISCFFI 335
Cdd:COG1290 271 GPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIV 350
|
330 340 350
....*....|....*....|....*....|....*....
gi 84488818 336 LTWLGGQPVesPYIELGQVASIFYFSIFLFWMPFVSYLE 374
Cdd:COG1290 351 LTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
1.02e-82 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 250.75 E-value: 1.02e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 10 PILKVINSTFITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLRNIHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 90 LFFVCLYVHIGRGLYYGSYKN--FETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYLVQWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKprELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 84488818 168 GFSVDNATLVRFFAFHFLLPFVIVAFSVIHLLFLHQSGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
3.99e-74 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 228.42 E-value: 3.99e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 19 FITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLRNIHANGASLFFVCLYVH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 99 IGRGLYYGSYKNF--ETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYLVQWVWGGFSVDNATL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPreLTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 84488818 177 VRFFAFHFLLPFVIVAFSVIHLLFLHQSG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
229-340 |
1.67e-07 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 50.57 E-value: 1.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 229 DFLW-FLVVI--TFLCFV--AFFFPTVLNDPdnfvcANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILF 303
Cdd:TIGR01156 35 DLLYiFPVVIlgTIACVVglAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLL 109
|
90 100 110
....*....|....*....|....*....|....*...
gi 84488818 304 FVPLFHTSSQ-QSKIFCPLSQFVFwcLISCFFILtWLG 340
Cdd:TIGR01156 110 TVPFIENVNKfQNPFRRPVATTVF--LFGTVVAL-WLG 144
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00034 |
cytochrome b; Validated |
2-380 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 654.08 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 2 VGPIRKSHPILKVINSTFITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLR 81
Cdd:MTH00034 1 TGPLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 82 NIHANGASLFFVCLYVHIGRGLYYGSYKNFETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYL 161
Cdd:MTH00034 81 NIHANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 162 VQWVWGGFSVDNATLVRFFAFHFLLPFVIVAFSVIHLLFLHQSGSNNPTGINSNSDKVPFHVYYTIKDFLWFLVVITFLC 241
Cdd:MTH00034 161 VQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 242 FVAFFFPTVLNDPDNFVCANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILFFVPLFHTSSQQSKIFCPL 321
Cdd:MTH00034 241 SLALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPL 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 84488818 322 SQFVFWCLISCFFILTWLGGQPVESPYIELGQVASIFYFSIFLFWMPFVSYLENLFIFN 380
Cdd:MTH00034 321 SQIAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLIFS 379
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-375 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 628.08 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 1 MVGPIRKSHPILKVINSTFITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLL 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 81 RNIHANGASLFFVCLYVHIGRGLYYGSYKNFETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVY 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 161 LVQWVWGGFSVDNATLVRFFAFHFLLPFVIVAFSVIHLLFLHQSGSNNPTGINSNSDKVPFHVYYTIKDFLWFLVVITFL 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 241 CFVAFFFPTVLNDPDNFVCANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILFFVPLFHTSSQQSKIFCP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 84488818 321 LSQFVFWCLISCFFILTWLGGQPVESPYIELGQVASIFYFSIFLFWMPFVSYLEN 375
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALEN 375
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
4-375 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 611.64 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 4 PIRKSHPILKVINSTFITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLRNI 83
Cdd:MTH00100 3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 84 HANGASLFFVCLYVHIGRGLYYGSYKNFETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYLVQ 163
Cdd:MTH00100 83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 164 WVWGGFSVDNATLVRFFAFHFLLPFVIVAFSVIHLLFLHQSGSNNPTGINSNSDKVPFHVYYTIKDFLWFLVVITFLCFV 243
Cdd:MTH00100 163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 244 AFFFPTVLNDPDNFVCANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILFFVPLFHTSSQQSKIFCPLSQ 323
Cdd:MTH00100 243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 84488818 324 FVFWCLISCFFILTWLGGQPVESPYIELGQVASIFYFSIFLFWMPFVSYLEN 375
Cdd:MTH00100 323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIEN 374
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-375 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 609.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 1 MVGPIRKSHPILKVINSTFITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLL 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 81 RNIHANGASLFFVCLYVHIGRGLYYGSYKNFETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVY 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 161 LVQWVWGGFSVDNATLVRFFAFHFLLPFVIVAFSVIHLLFLHQSGSNNPTGINSNSDKVPFHVYYTIKDFLWFLVVITFL 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 241 CFVAFFFPTVLNDPDNFVCANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILFFVPLFHTSSQQSKIFCP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 84488818 321 LSQFVFWCLISCFFILTWLGGQPVESPYIELGQVASIFYFSIFLFWMPFVSYLEN 375
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLEN 375
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-375 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 607.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 5 IRKSHPILKVINSTFITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLRNIH 84
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 85 ANGASLFFVCLYVHIGRGLYYGSYKNFETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYLVQW 164
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 165 VWGGFSVDNATLVRFFAFHFLLPFVIVAFSVIHLLFLHQSGSNNPTGINSNSDKVPFHVYYTIKDFLWFLVVITFLCFVA 244
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 245 FFFPTVLNDPDNFVCANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILFFVPLFHTSSQQSKIFCPLSQF 324
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 84488818 325 VFWCLISCFFILTWLGGQPVESPYIELGQVASIFYFSIFLFWMPFVSYLEN 375
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLEN 374
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-380 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 598.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 1 MVGPIRKSHPILKVINSTFITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLL 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 81 RNIHANGASLFFVCLYVHIGRGLYYGSYKNFETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVY 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 161 LVQWVWGGFSVDNATLVRFFAFHFLLPFVIVAFSVIHLLFLHQSGSNNPTGINSNSDKVPFHVYYTIKDFLWFLVVITFL 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 241 CFVAFFFPTVLNDPDNFVCANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILFFVPLFHTSSQQSKIFCP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 321 LSQFVFWCLISCFFILTWLGGQPVESPYIELGQVASIFYFSIFLfWMPFVSYLENLFIFN 380
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFL-ILPLVQKLWDNILDY 379
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-369 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 598.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 5 IRKSHPILKVINSTFITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLRNIH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 85 ANGASLFFVCLYVHIGRGLYYGSYKNFETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYLVQW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 165 VWGGFSVDNATLVRFFAFHFLLPFVIVAFSVIHLLFLHQSGSNNPTGINSNSDKVPFHVYYTIKDFLWFLVVITFLCFVA 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 245 FFFPTVLNDPDNFVCANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILFFVPLFHTSSQQSKIFCPLSQF 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 84488818 325 VFWCLISCFFILTWLGGQPVESPYIELGQVASIFYFSIFLFWMPF 369
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 579.82 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 12 LKVINSTFITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLRNIHANGASLF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 92 FVCLYVHIGRGLYYGSYKNFETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYLVQWVWGGFSV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 172 DNATLVRFFAFHFLLPFVIVAFSVIHLLFLHQSGSNNPTGINSNSDKVPFHVYYTIKDFLWFLVVITFLCFVAFFFPTVL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 252 NDPDNFVCANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILFFVPLFHTSSQQSKIFCPLSQFVFWCLIS 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....
gi 84488818 332 CFFILTWLGGQPVESPYIELGQVASIFYFSIFLF 365
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFII 354
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-379 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 549.66 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 1 MVGPIRKSHPILKVINSTFITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLL 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 81 RNIHANGASLFFVCLYVHIGRGLYYGSYKNFETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVY 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 161 LVQWVWGGFSVDNATLVRFFAFHFLLPFVIVAFSVIHLLFLHQSGSNNPTGINSNSDKVPFHVYYTIKDFLWFLVVITFL 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 241 CFVAFFFPTVLNDPDNFVCANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILFFVPLFHTSSQQSKIFCP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 84488818 321 LSQFVFWCLISCFFILTWLGGQPVESPYIELGQVASIFYFSIFLFwMPFVSYLENLFIF 379
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMI-NPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-380 |
2.61e-179 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 503.08 E-value: 2.61e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 4 PIRKSHPILKVINSTFITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLRNI 83
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 84 HANGASLFFVCLYVHIGRGLYYGSYKNFETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYLVQ 163
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 164 WVWGGFSVDNATLVRFFAFHFLLPFVIVAFSVIHLLFLHQSGSNNPTGINSNSDKVPFHVYYTIKDFLWFLVVITFLCFV 243
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 244 AFFFPTVLNDPDNFVCANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILFFVPLFHTSSQQSKIFCPLSQ 323
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 84488818 324 FVFWCLISCFFILTWLGGQPVESPYIELGQVASIFYFSIFLFWMPFVSYLENLFIFN 380
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLFK 378
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-364 |
3.70e-173 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 487.51 E-value: 3.70e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 1 MVGPIRKSHPILKVINSTFITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLL 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 81 RNIHANGASLFFVCLYVHIGRGLYYGSYKNFETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVY 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 161 LVQWVWGGFSVDNATLVRFFAFHFLLPFVIVAFSVIHLLFLHQSGSNNPTGINSNSDKVPFHVYYTIKDFLWFLVVITFL 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 241 CFVAFFFPTVLNDPDNFVCANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILFFVPLFHTSSQQSKIFCP 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 84488818 321 LSQFVFWCLISCFFILTWLGGQPVESPYIELGQVASIFYFSIFL 364
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFI 364
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-375 |
4.29e-172 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 484.98 E-value: 4.29e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 1 MVGPIRKSHPILKVINSTFITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLL 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 81 RNIHANGASLFFVCLYVHIGRGLYYGSYKNFETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVY 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 161 LVQWVWGGFSVDNATLVRFFAFHFLLPFVIVAFSVIHLLFLHQSGSNNPTGINSNSDKVPFHVYYTIKDFLWFLVVITFL 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 241 CFVAFFFPTVLNDPDNFVCANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILFFVPLFHTSSQQSKIFCP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 84488818 321 LSQFVFWCLISCFFILTWLGGQPVESPYIELGQVASIFYFSIFLFWMPFVSYLEN 375
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLEN 375
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
20-377 |
1.43e-134 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 389.68 E-value: 1.43e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 20 ITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLRNIHANGASLFFVCLYVHI 99
Cdd:MTH00033 16 IDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 100 GRGLYYGSYKNFETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYLVQWVWGGFSVDNATLVRF 179
Cdd:MTH00033 96 GRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRF 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 180 FAFHFLLPFVIVAFSVIHLLFLHQSGSNNPTGINSNSDKVPFHVYYTIKDFLWFLVVITFLCFVAF--FFPTVLNDPDNF 257
Cdd:MTH00033 176 FSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIepRIETLLQDPENF 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 258 VCANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILFFVPLFHTSSQQSKIFCPLSQFVFWCLISCFFILT 337
Cdd:MTH00033 256 IQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILT 335
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 84488818 338 WLGGQPVES-PYIELGQVASIFYFSIFLFWMPFVSYLENLF 377
Cdd:MTH00033 336 WIGSAPAGAdPYVLIGRIATIFYFGYFLVLVPLLGYLSNLF 376
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
25-374 |
3.00e-128 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 373.74 E-value: 3.00e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 25 PSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLRNIHANGASLFFVCLYVHIGRGLY 104
Cdd:COG1290 33 PKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFF 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 105 YGSYKNFE--TWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYLVQWVWGGFSVDNATLVRFFAF 182
Cdd:COG1290 113 YGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFAL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 183 H-FLLPFVIVAFSVIHLLFLHQSGSNNPTGI----NSNSDKVPFHVYYTIKDFLWFLVVITFLCFVAFFFPtvLNDPDNF 257
Cdd:COG1290 193 HvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP--INPPPNY 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 258 VCANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVLALLGAILILFFVPLFHTSSQQSKIFCPLSQFVFWCLISCFFI 335
Cdd:COG1290 271 GPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIV 350
|
330 340 350
....*....|....*....|....*....|....*....
gi 84488818 336 LTWLGGQPVesPYIELGQVASIFYFSIFLFWMPFVSYLE 374
Cdd:COG1290 351 LTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
15-367 |
1.67e-114 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 337.68 E-value: 1.67e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 15 INSTFITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLRNIHANGASLFFVC 94
Cdd:MTH00086 3 VNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 95 LYVHIGRGLYYGSYKNFETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYLVQWVWGGFSVDNA 174
Cdd:MTH00086 83 LYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 175 TLVRFFAFHFLLPFVIVAFSVIHLLFLHQSGSNNPTGINSNSDKVPFHVYYTIKDFLWFLVVITFLCFvAFFFPTVLNDP 254
Cdd:MTH00086 163 TLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWLVFIIF-SLFYPFNLGDP 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 255 DNFVCANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILFFVPLFHTSSQqskIFCPLSQFVFWCLISCFF 334
Cdd:MTH00086 242 EMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYTS---CLNKLNKFLVFSFIVVNV 318
|
330 340 350
....*....|....*....|....*....|...
gi 84488818 335 ILTWLGGQPVESPYIELGQVASIFYFSIFLFWM 367
Cdd:MTH00086 319 ILSWLGQCLVEYPFLFLSQIFSFIYFFLILLML 351
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
12-358 |
7.65e-92 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 279.56 E-value: 7.65e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 12 LKVINSTFITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLRNIHANGASLF 91
Cdd:MTH00046 2 ISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 92 FVCLYVHIGRGLYYGSYKNFETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYLVQWVWGGFSV 171
Cdd:MTH00046 82 FILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 172 DNATLVRFFAFHFLLPFVIVAFSVIHLLFLHQSGSNNPTGI-NSNSDKVPFHVYYTIKDFLWFLVVITFLCFVAFFFPTV 250
Cdd:MTH00046 162 TGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 251 LNDPDNFVCANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVlallgAILILFFVPLFHTSSQQSKIFCPLSQFVFWCLI 330
Cdd:MTH00046 242 VLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGL-----VLVLSFLFFLWVPTFNGSSVYSVWRQVNFWLIV 316
|
330 340
....*....|....*....|....*...
gi 84488818 331 SCFFILTWLGGQPVESPYIELGQVASIF 358
Cdd:MTH00046 317 SLFFSLSYLGGCHPEYPYLLISQLFSVL 344
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
1.02e-82 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 250.75 E-value: 1.02e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 10 PILKVINSTFITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLRNIHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 90 LFFVCLYVHIGRGLYYGSYKN--FETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYLVQWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKprELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 84488818 168 GFSVDNATLVRFFAFHFLLPFVIVAFSVIHLLFLHQSGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
3.99e-74 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 228.42 E-value: 3.99e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 19 FITLPCPSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLRNIHANGASLFFVCLYVH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 99 IGRGLYYGSYKNF--ETWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYLVQWVWGGFSVDNATL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPreLTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 84488818 177 VRFFAFHFLLPFVIVAFSVIHLLFLHQSG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
89-254 |
3.72e-46 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 155.86 E-value: 3.72e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 89 SLFFVCLYVHIGRGLYYGSYKNFE--TWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYLVQWVW 166
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 167 GGFSVDNATLVRFFAFHF-LLPFVIVAFSVIHLLFLHQSGSNNPTGINSNSDKVPFHVYYTIKDFLWFLVVITFLCFVAF 245
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 84488818 246 FFPTVLNDP 254
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
30-209 |
4.29e-39 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 139.08 E-value: 4.29e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 30 IWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLRNIHANGASLFFVCLYVHIGRGLYYGSYK 109
Cdd:PRK03735 40 FVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYK 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 110 NFE--TWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYLVQWVWGGFSVDNATLVRFFAFH-FLL 186
Cdd:PRK03735 120 KPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFL 199
|
170 180
....*....|....*....|...
gi 84488818 187 PFVIVAFSVIHLLFLHQSGSNNP 209
Cdd:PRK03735 200 PWALAVLMLAHFLMIRKQGISGP 222
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-355 |
1.19e-38 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 135.47 E-value: 1.19e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 208 NPTGINSNSDKVPFHVYYTIKDFLWFLVVITFLCFVAFFFPTVLNDPDNFVCANPLVTPVHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 84488818 288 KLGGVLALLGAILILFFVPLFHTSSQQSKiFCPLSQFVFWCLISCFFILTWLGGQPVESPYIELGQVA 355
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRSQ-FRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
260-359 |
6.44e-34 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 121.43 E-value: 6.44e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 260 ANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILFFVPLFHTSSQQSKIFCPLSQFVFWCLISCFFILTWL 339
Cdd:pfam00032 2 ANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGWL 81
|
90 100
....*....|....*....|
gi 84488818 340 GGQPVESPYIELGQVASIFY 359
Cdd:pfam00032 82 GKQPPTGPYTLLGQIATVYY 101
|
|
| petB |
CHL00070 |
cytochrome b6 |
25-209 |
3.69e-31 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 117.90 E-value: 3.69e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 25 PSNFFIWWNFGSLLGLCLIIQLISGLFLSMHYTADVSLAFSSVSHICRDVNYGWLLRNIHANGASLFFVCLYVHIGRGLY 104
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 105 YGSYKNFE--TWNVGVLLLFLVMGTAFVGYVLPWGQMSFWGATVITNLLSAIPYFGVYLVQWVWGGFSVDNATLVRFFAF 182
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*...
gi 84488818 183 H-FLLPFVIVAFSVIHLLFLHQSGSNNP 209
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGP 214
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
229-340 |
6.81e-09 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 54.41 E-value: 6.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 229 DFLW-FLVVI---TFLCF-VAFFFPTVLNDPdnfvcANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILF 303
Cdd:COG5679 36 DLLYiFPVVIlgtIALCIgLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLM 110
|
90 100 110
....*....|....*....|....*....|....*...
gi 84488818 304 FVPLFHTSSQ-QSKIFCPLSQFVFwcLISCFFILtWLG 340
Cdd:COG5679 111 LVPFIENVNKfQNPFRRPVATAVF--LFGTLVTL-WLG 145
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
233-292 |
2.92e-08 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 52.70 E-value: 2.92e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 84488818 233 FLVVI--TFLCFV--AFFFPTVLNDPdnfvcANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGV 292
Cdd:CHL00058 40 FPVVIlgTIACNVglAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGV 98
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
229-340 |
1.67e-07 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 50.57 E-value: 1.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84488818 229 DFLW-FLVVI--TFLCFV--AFFFPTVLNDPdnfvcANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALLGAILILF 303
Cdd:TIGR01156 35 DLLYiFPVVIlgTIACVVglAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLL 109
|
90 100 110
....*....|....*....|....*....|....*...
gi 84488818 304 FVPLFHTSSQ-QSKIFCPLSQFVFwcLISCFFILtWLG 340
Cdd:TIGR01156 110 TVPFIENVNKfQNPFRRPVATTVF--LFGTVVAL-WLG 144
|
|
| |
