|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.03e-169 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 475.85 E-value: 1.03e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 1 MNPHAKLMSTLSLMLGTTITISSNHWMMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWF 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 81 TGQWDITQLSHPTSSLLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKFPPITILFLTSHSLNPTLLTAMAIA 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPKLTLLTFYLYSLMTTTVFLTLNTTKTLNLSTLMTSWTKTPML 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 241 NATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRLAYYSTITLPPNSTNHMKQWHIDKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 108793408 321 TTTSIAVLTSLSISLLPLSPMILTTI 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-323 |
1.39e-134 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 386.85 E-value: 1.39e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 1 MNPHAKLMSTLSLMLGTTITISSNHWMMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWF 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 81 TGQWDITQLSHPTSSLLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKFPPITILFLTSHSlNPTLLTAMAIA 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPKLTLLTFYLYSLMTTTVFLTLNTTKTLNLSTLMTSWTKTPML 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 241 NATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRLAYYSTITLPPNSTNHMKQWHIDKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
...
gi 108793408 321 TTT 323
Cdd:MTH00135 320 QLT 322
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-329 |
1.26e-131 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 379.27 E-value: 1.26e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 1 MNPHAKLMSTLSLMLGTTITISSNHWMMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWF 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 81 TGQWDITQLSHPTSSLLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKFPPITILFLTSHSLNPTLLTAMAIA 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPKLTLLTFYLYSLMTTTVFLTLNTTKTLNLSTLMTSWTKTPML 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 241 NATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRLAYYSTITLPPNSTNHMKQWHIDKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
....*....
gi 108793408 321 TTTSIAVLT 329
Cdd:MTH00070 321 TNNLLSLTI 329
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-325 |
9.05e-118 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 344.14 E-value: 9.05e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 1 MNPHAKLMSTLSLMLGTTITISSNHWMMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWF 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 81 TGQWDITQLSHPTSSLLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKFPPITILFLTSHSLNPTLLTAMAIA 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPKLTLLTFYLYSLMTTTVFLTLNTTKTLNLSTLMTSWTKTPML 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 241 NATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRLAYYSTITLPPnSTNHMK-QWHIDK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWQFEN 319
|
....*.
gi 108793408 320 PTTTSI 325
Cdd:MTH00105 320 TKPMTL 325
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-315 |
3.71e-96 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 289.18 E-value: 3.71e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 1 MNPHAKLMSTLSLMLGTTITISSNHWMMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWF 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 81 TGQWDITQLSHPTSSLLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKFPPITILFLTSHSLNPTLLTAMAIA 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPKLTLLTFYLYSLMTTTVFLTLNTTKTLNLSTLMTSWTKTPML 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 108793408 241 NATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRLAYYSTITLPPNSTNHMKQW 315
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSW 315
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
11-329 |
4.20e-91 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 276.43 E-value: 4.20e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 11 LSLMLGTTITISSNHWMMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWFTGQWDITQLS 90
Cdd:MTH00041 11 TSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 91 HPTSSLLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKFPPITILFLTSHSLNPTLLTAMAIASAALGGWMGL 170
Cdd:MTH00041 91 NTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 171 NQTQTRKILAFSSISHLGWMAIIIVYNPKLTLLTFYLYSLMTTTVFLTLNTTKTLNLSTLMTSWTKTPMLNATLMLTLLS 250
Cdd:MTH00041 171 NQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILS 250
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 108793408 251 LAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRLAYYSTITLPPNSTNHMKQWHIDKPTTTSIAVLT 329
Cdd:MTH00041 251 LGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGVILS 329
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-319 |
8.68e-66 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 210.84 E-value: 8.68e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 1 MNPHAKLMSTLSLMLGTTITISSNHWMMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWF 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 81 TGqwditqLSHPTSSLLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKFPPITILfltSHSLNPTLLTAMAIA 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPKLTLLTFYLYSLMTTTVFLTLNTTKTLNLSTLMTSWTKTPML 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 108793408 241 NATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRLAyYSTITLPPNSTNHMKQWHIDK 319
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRIS-YSSLMLNYNKNKWNLKKKKNK 310
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-302 |
1.17e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 179.31 E-value: 1.17e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 5 AKLMSTLSLMLGTTITISSNHWMMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWFTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 85 DitqlshptSSLLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKFPPI-TILFLTSHSLNPTLLTAMAIASAA 163
Cdd:MTH00144 85 F--------SMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLfLLSNFLDLYWLAYLLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 164 LGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPKLTLLTFYLYSLMTTTVFLTLNTTKTLNLSTlMTSWTKTPMLNAT 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD-LGSLKPSYKTGLS 235
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 108793408 244 LMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRLAYYSTI 302
Cdd:MTH00144 236 IISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-310 |
1.72e-49 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 168.42 E-value: 1.72e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 1 MNPHAKLMSTlSLMLGTTITISSNHWMMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAASALVLFSsMTNAWF 80
Cdd:MTH00011 4 TFPTMFLFSS-TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLG-MTMMWS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 81 TgqwdITQLSHPTSsLLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKFPPITILFLTSHSLNPTLLTAMAIA 160
Cdd:MTH00011 82 F----PSLLKNITA-LMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPKLTLLTFYLYSLMTTTVFLTLNTTKTLNLSTLMTSWTKTPML 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 241 NATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRLAyYSTITLPPNSTN 310
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLI-FNFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-302 |
5.72e-43 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 151.36 E-value: 5.72e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 11 LSLMLGTTITISSNHWMMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAASALVLFSSMtnAWFTGQWDITqls 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGS--LSFSNLYLSL--- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 91 hpTSSLLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKFPPITILFLTSHslNPTLLTAMAIASAALGGWMGL 170
Cdd:MTH00197 80 --LSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 171 NQTQTRKILAFSSISHLGWMAIIIVYNPKLTLLTFYLYSLMTTTVFLTLNTTKTLNLSTLMTSWTKTPMLNATLMLTLLS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 108793408 251 LAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRLAYYSTI 302
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
15-299 |
3.71e-39 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 144.49 E-value: 3.71e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 15 LGTTITISSNHWMMAWTGLEINTLAIIPLIS-KSHHPRAVEAAIKYFLVQAAASALVLF-SSMTNAwFTGQWDITQLS-- 90
Cdd:COG1007 113 LGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIAaa 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 91 ---HPTSSLLLTTAVAM-------KLGLVPFHFWFPEVLQGSSLTTALLLSTVMK----FPPITILFLTSHSLNP---TL 153
Cdd:COG1007 192 laaGGANSPLLLLGLVLvlaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaafAALLRLLVEAFPGLAAdwqLL 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 154 LTAMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPKLTL--LTFYL--YSLMTTTVFLTL-----NTTKT 224
Cdd:COG1007 272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVIlllsrKGGEA 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 108793408 225 LNLSTLMTSWTKTPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRLAYY 299
Cdd:COG1007 352 EEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKA 426
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
15-296 |
4.46e-33 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 125.91 E-value: 4.46e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 15 LGTTITISSNHWMMAWTGLEINTLAIIPLI-SKSHHPRAVEAAIKYFLVQAAASALVLFS-------------SMTNAWF 80
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINLVL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 81 TGQWDITQLSHPTSSLLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKFPPITILFltSHSLNPTLLTAMAIA 160
Cdd:MTH00196 84 NSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGGLF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNP----KLTLLTFYLYSLMTTTVF---LTLNTTKTLnLSTLMTS 233
Cdd:MTH00196 162 SLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFsiiLALNVYKNL-IIEFSGL 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 108793408 234 WTKTPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRL 296
Cdd:MTH00196 241 SRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
7-299 |
6.27e-33 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 127.24 E-value: 6.27e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 7 LMSTLSLMlgttITISSNHWMMAWTGLEINTLAIIPLIS-KSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWFTGQWD 85
Cdd:PRK05777 110 LFALLGMM----VMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 86 ITQL-----SHPTSSLLLTTAVAM-------KLGLVPFHFWFPEVLQGSSLTTALLLSTVMK---FPPIT----ILFLTS 146
Cdd:PRK05777 186 FAGIakalaDGSGNSLLLLFGLVFllvglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrllvVAFGGL 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 147 HSLNPTLLTAMAIASAALGGWMGLNQTQTRKILAFSSISHLGWM--AIIIVYNPKLTLLTFYL--YSLMTTTVF--LTLN 220
Cdd:PRK05777 266 SEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvGLAAGTAEGYSAVLFYLlaYLFMTLGAFgvISLL 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 221 TTKTLNLSTLmTSWT----KTPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRL 296
Cdd:PRK05777 346 RRKGGEAESI-SDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
...
gi 108793408 297 AYY 299
Cdd:PRK05777 425 IKL 427
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
15-297 |
1.57e-29 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 117.74 E-value: 1.57e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 15 LGTTITISSNHWMMAWTGLEINTLAIIPLIS-KSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWFTGQWDITQLSHPT 93
Cdd:TIGR01770 113 LGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 94 SS------------LLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMK---FPPITILFLTS----HSLNPTLL 154
Cdd:TIGR01770 193 SNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaiFAVFLRLFLYIlfgfSEAWQIFL 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 155 TAMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPKLTL--LTFYL--YSLMTTTVFLTL------NTTKT 224
Cdd:TIGR01770 273 AIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYIfiYALMSLGAFGVLsllrsyKDEWI 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 108793408 225 LNLSTLMTSWTKTPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRLA 297
Cdd:TIGR01770 353 EYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
11-296 |
6.73e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 115.88 E-value: 6.73e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 11 LSLMLGTTITISSNHWMMAWTGLEINTLAIIPLIS-KSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWFTGQWDI--- 86
Cdd:MTH00199 104 LIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqgi 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 87 -TQLSHPTSSLLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKFPPITILFLTSHSLNPTLLTAmaIASAALG 165
Cdd:MTH00199 184 nSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLICA--VLSIIYG 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 166 GWMGLNQTQTRKILAFSSISHLGW----MAIIIVYNPKLTLLTFYLYSLMTTTVF---LTLNTTKTLNLSTLMTSwTKTP 238
Cdd:MTH00199 262 AIGALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFsiiLSLKLTKGLIVEVSGLS-RKNP 340
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 108793408 239 MLNATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRL 296
Cdd:MTH00199 341 VIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
6.49e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 110.48 E-value: 6.49e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 23 SNHWMMAWTGLEINTLAIIPLI-SKSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWFTGQWDITQLSHPT-------- 93
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALtgglnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 94 ---SSLLLTTAVAMKLGLVPFHFWFPEVLQGSSLT-TALLLSTVMKFPPITILFLTS--HSLNPT---LLTAMAIASAAL 164
Cdd:pfam00361 81 lllLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGGYGLIRRSLlyLPSSPFiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 165 GGWMGLNQTQTRKILAFSSISHLGWMAIII----VYNPKLTLLTFYLYSLMTTTVFL-----TLNTTKTLNLSTLMTSWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 108793408 236 KTPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
7.38e-25 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 104.07 E-value: 7.38e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 13 LMLGTTITISSNHWMMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWFTGQWDITQLSHP 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 93 TSSL----------LLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMK--------------FPPITILFLTshs 148
Cdd:COG0651 196 LAELdpglllaafaLLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTkvgvyailrvltllFGADPALFLG--- 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 149 lnpTLLTAMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPKLTLLTFYLY----SLMTTTVFLT----LN 220
Cdd:COG0651 273 ---TLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAagaiER 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 108793408 221 TTKTLNLSTLMTSWTKTPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRL 296
Cdd:COG0651 350 ATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-296 |
2.67e-21 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 94.93 E-value: 2.67e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 3 PHAKLMSTLSLMLGTTITISSNHWMMAWTGLEINTLAIIPLISKSHHPRAV---------EAAIKYFLVQAAASALVLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 74 SMTNAWFTGQWDI--TQLSHPTSS------------LLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKFppI 139
Cdd:MTH00198 267 CALYFGFTGNEGMlgTILSATLETtnielrqgslgyLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--T 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 140 TILFLTSHSLNPTLLTAMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMAIII-------VYNPKLTLLTFYLYSLMT 212
Cdd:MTH00198 345 VYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVsagtyesLQASWTYAVTYLVSALAS 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 213 TTVFLTL------------------NTTKTLNLSTLMTSWTKTPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQE 274
Cdd:MTH00198 425 FTVICTLeefgtrtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIA 504
|
330 340
....*....|....*....|....*....
gi 108793408 275 MTAAATIITMLSLLGL-------FFYLRL 296
Cdd:MTH00198 505 FSSSLSIYYLVALFAIictcisaFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
1.94e-16 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 80.05 E-value: 1.94e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 51 RAVEAAIKYFLVQAAASALVL--FSsmtnaWFTGQ-------WDI------TQLSHPTSSLL----LTTAVAMKLGLVPF 111
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFS-----WLYGLsggeielQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPF 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 112 HFWFPEVLQGS-----------SLTTALLLSTVMkfppITILFLTSHSLNPTLLTAMAIASAALGGWMGLNQTQTRKILA 180
Cdd:CHL00049 234 HQWTPDVYEGSptpvvaflsvtSKVAASALATRI----FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLA 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 181 FSSISHLGWMAI-IIVYNPK------LTLLTFYLYSLMTTTVFLTLNT--TKTLNLSTLMTSWTKTPMLNATLMLTLLSL 251
Cdd:CHL00049 310 YSSIGQIGYVIIgIIVGDSNdgyasmITYMLFYIFMNLGTFACIVLFGlrTGTDNIRDYAGLYTKDPFLALSLALCLLSL 389
|
250
....*....|..
gi 108793408 252 AGLPPLTGFLPK 263
Cdd:CHL00049 390 GGIPPLAGFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.19e-15 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 77.78 E-value: 1.19e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 50 PRAVEAAIKYFLVQAAASALVLF-SSMTNAWFTGQwdiTQLSH------PTSSLLLTTA-------VAMKLGLVPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLSAialaliTSPSLGLALAlvfviagIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 116 PEVLQGSSLTTALLLSTVMKFP--PITILFLTSHSLNPT-----LLTAMAIASAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKAAgfALAIRLLVTAFPSFDeqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 189 WMAIIIVYNPK--LTLLTFYL--YSLMT----TTVFLTLNTTKTLNLSTLMTSWTKTPMLNATLMLTLLSLAGLPPLTGF 260
Cdd:PRK02504 314 FVMIGLVAGTEagYASMVFYLlaYLFMNlgafACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGF 393
|
...
gi 108793408 261 LPK 263
Cdd:PRK02504 394 FGK 396
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-292 |
3.87e-13 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 70.11 E-value: 3.87e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 38 LAIIP---LISKSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWFTGQW--DITQLSHPTSS--------LLLTTAVAM 104
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPLPltaqlllfLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 105 KLGLVPFHFWFPEVLQGSSLTTALLLSTVM---------KFPpITILFLTSHSLNPTLLtAMAIASAALGGWMGLNQTQT 175
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLlkmggygllRFA-LPLFPEASAYFAPLLA-ALGVIGIIYGALVALAQTDL 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 176 RKILAFSSISHLGWMAI-IIVYNPK-LTLLTFYLYS--LMTTTVFLTL----NTTKTLNLSTLMTSWTKTPMLNATLMLT 247
Cdd:COG1008 300 KRLIAYSSVSHMGFVLLgIFALNPLgLQGAVLQMVShgLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFLLA 379
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 108793408 248 LLSLAGLPPLTGFLPKWLIIQELTKqemtaAATIITMLSLLGLFF 292
Cdd:COG1008 380 ALASLGLPGTSGFVGEFLVLLGAFQ-----VNPWLAILAALGLIL 419
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-287 |
6.99e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 69.36 E-value: 6.99e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 33 LEINTLAIIPLIS-KSHHPRAVEAAIKYFLVQAAASALVLFSSmtnAWFTGQWDITQLSHPTSSL-------------LL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMAYLAVKMsenptvvakialaLF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 99 TTAVAMKLGLVPFHFWFPEVLQG--SSLTTALLLSTVMKFPPIT-ILF-LTSHSLNPT----LLTAMAIASAALGGWMGL 170
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALArVLFsIYGPAINLAtvgwVIIILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 171 NQTQTRKILAFSSISHLGWM------AIIIVYNPKLT----------LLTFYLYSLMTTTVFLT----LNTTKTLNLSTL 230
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMllglgvGLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTagavIYETGTRNLNEL 386
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 108793408 231 MTSWTKTPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQE--LTKQEMTAAATIITMLSL 287
Cdd:PRK08376 387 GGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESsaLFNPILGVIAMIGSVLTL 445
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-299 |
1.16e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 68.37 E-value: 1.16e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 33 LEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAASALVLFS-SMTNAwFTGQWDITQLSH--PTSSLLLT------TAVA 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLAGalAENPTVVTafgfvlLALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 104 MKLGLVPFHFWFPEVLQG-SSLTTALLLSTVMKFPPITILFLTSHSLNP---------TLLTAMAIASAALGGWMGLNQT 173
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAVYALIRIYFTVFGGdfrfalglgWLLAVLALLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 174 QTRKILAFSSISHLGWMAIIIVYNPKLTLL--TFYL--YSLMTTTVFLTLN----TTKTLNLSTLMTSWTKTPMLNATLM 245
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGaievTYGTRRLSELSGLGRRMPLTAAAFA 373
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 108793408 246 LTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRLAYY 299
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-298 |
1.16e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 62.71 E-value: 1.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 2 NPHAKLMSTLSLMLGTTITISSNHWMMAWTGLEINTLA---IIPLISKshhpRAVEAAIKYFLVQAAASALVLFSSMTNA 78
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIY 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 79 WFTGQWDITQ----LSHPTSS-------LLLTTAVAMKLGLVPFHFWFPE-----------VLQGS-SLTTALLLSTVMK 135
Cdd:PRK08668 172 AKTGTFDFADisqgLINDTSTgfalivfLFLLAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQlSKLGAYGFLLVLY 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 136 FPPITILFLT-----SHSLNPTLLTAMAIASAALGGWMGLNQTQTRKILAFSSISHLGW--MAIIIVYNPKLTLLTFYLY 208
Cdd:PRK08668 252 VLPGTKLFSEfgtyrGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYilVGLGLGTSLGFAGGLFHVF 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 209 S--LMTTTVFLTLNT----TKTLNLSTLMTSWTKTPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATII 282
Cdd:PRK08668 332 NhaLFKGLFFLIFAAviyrTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMA 411
|
330
....*....|....*.
gi 108793408 283 TMLSLLGLFFYLRLAY 298
Cdd:PRK08668 412 FFGSIGSFLYVFRPLA 427
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-292 |
3.29e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 61.11 E-value: 3.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 50 PRAVEAAIKYFLVQAAASALVLFSSMTNAWFTGQW----DITQLSHPTSS-----LLLTTAVAMKLGLVPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 120 QGSSLTTALLLSTVMKFPPITI------LFLTSHSLNPTLLTAMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMAII 193
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFlrfnlpLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLG 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 194 IVYNPKLTLL--TFYLYS--LMTTTVFLTLNT----TKTLNLSTLMTSWTKTPMLNATLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:TIGR01972 312 IFSFNELGISgaVFQMIShgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
250 260
....*....|....*....|....*..
gi 108793408 266 IIQELTKqemtaAATIITMLSLLGLFF 292
Cdd:TIGR01972 392 ILLGSFK-----VNPVVAFLAALGIVL 413
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
81-263 |
1.57e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 59.17 E-value: 1.57e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 81 TGQWDITQL-SHPTSSLLLTTAVAM-------KLGLVPFHFWFPEVLQGSSLTTALLLSTVM---------KFPPItilF 143
Cdd:PRK12644 184 AGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG---F 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 144 LTSHSLNPTLLTaMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPK------LTLLTfyLYSLMTTTVFL 217
Cdd:PRK12644 261 ADVPVWRPTVLV-LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAMLL--AHALFKAALFL 337
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 108793408 218 TL----NTTKTLNLSTLMTSWTKTPMLNATLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 338 VVgiidHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
14-301 |
1.59e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 59.01 E-value: 1.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 14 MLGttITISSNHWMMaWTGLEINTLAIIPLISKSHH-PRAVEAAIKYFLVQAAASALVLFSSMTNAWFTGQWDITQL--- 89
Cdd:COG1009 124 MLG--LVLSDNLLLL-FVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaa 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 90 -SHPTSSLLLTTAVAM-------KLGLVPFHFWFPEVLQGSSLTTALLLSTVM---------KFPPITilfltshSLNPT 152
Cdd:COG1009 201 aPTILSSPLLTLILLLlllgafgKSAQFPLHFWLPDAMEGPTPVSALLHAATMvkagvyllaRLSPLF-------ALSPV 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 153 LLTAMAI---ASAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVynpkLTLLTFYLYSLMTTTVFLTL---------N 220
Cdd:COG1009 274 WLTVVAIigaITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALG----VGAYVAALFHLLTHAFFKALlflgagsviH 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 221 TTKTLNLSTLMTSWTKTPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQELTkqEMTAAATIITMLSLLGLFFylrLAYYS 300
Cdd:COG1009 350 ATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAAL--EAGGLGPLLLAVALLGAFL---TAFYS 424
|
.
gi 108793408 301 T 301
Cdd:COG1009 425 F 425
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
2.17e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 58.42 E-value: 2.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 33 LEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWFTGQWDITQLSH--PTSSLLLTTAVAMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 111 FHFWFPEVLQGSSLTTALLLSTVMKFPPITILFLTSHSLNPT--LLTAMAIASAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 189 WmaiiIVYNPKLTLLTFYLYSLMTTTVFLTLNTTKTLNLstlmTSWTKTPMLNAT-LMLTL--LSLAGLPPLTGFLPKWL 265
Cdd:PRK07234 283 F----ILAAPLVGGLYALAHGLVKSTLFLCAGALPSRNF----TELISQMLGIGKwIPLTMasFSIAGFPLLAGFVSKVL 354
|
....*.
gi 108793408 266 IIQELT 271
Cdd:PRK07234 355 TLKNLL 360
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-329 |
2.82e-09 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 58.12 E-value: 2.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 34 EINTLAIIPLISKSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWFTGQWDITQ-----LSHPTS------SLLLTTAV 102
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSpviyggLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 103 AMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKFPPITILF--------LTSHSLNPTLLTAMAIASAALGGWMGLNQTQ 174
Cdd:PRK06277 210 LYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLvifklfggLSYFPSAQGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 175 TRKILAFSSISHLGWMAIIIVYNPKLTLLTFYLYS----LMTTTVFL----TLNTTKTLNLSTLMTSWTKTPMLNATLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLgagiVSYRTKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 247 TLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSlLGLFFYLRLAYYSTITLPPNSTNHMKQWHIDKPTTTSIA 326
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVS-IGTFVSMMKAFYLIYLKPKPEELEYKNKKVPKYAVFSLA 448
|
...
gi 108793408 327 VLT 329
Cdd:PRK06277 449 VLT 451
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-289 |
2.46e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 55.70 E-value: 2.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 109 VPFHFWFPEVLQGSSLTTALLLSTVMKFPPITILFLTSHSLNPTLL--TAMAIASAA---LGGWMGLNQTQTRKILAFSS 183
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLwqTILPLFGGLtmlTGALLAVRQTDLKLILAYST 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 184 ISHLGWMAIIIVYNPKLTLLTFYLY----SLMTTTVFLTLNT----TKTLNLSTLMTSWTKTPMLNATLMLTLLSLAGLP 255
Cdd:PRK12647 292 VSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIidheTGTRDITKLGGLRRAMPITAAAALLAALSMAGLP 371
|
170 180 190
....*....|....*....|....*....|....
gi 108793408 256 PLTGFLPKWLIIQELTkqEMTAAATIITMLSLLG 289
Cdd:PRK12647 372 PLFGFLAKELIYEALL--EAPLWSLILTVAAVLG 403
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
92-293 |
6.04e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 54.19 E-value: 6.04e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 92 PTSSLLLTTAVAMKLGLVPFhFWFPEVLQGSSLTTALLLSTVMK-------FPPITILFLTSHSLNPTLLTAMAIASAAL 164
Cdd:PRK12663 207 TTIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVI 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 165 GGWMGLNQTQTRKILAFSSISHLGWM-AIIIVYNPK-LTLLTFYLYSLMT--TTVFLTLNTTKTL----NLSTLMTSWTK 236
Cdd:PRK12663 286 GALGALAYKDIRRIAGYQVISSIGFIlLGLALGTPAgINGAIFYLVHDMVvkTALFLIAGSLVRLtgyrSLQYLGGLYRK 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 108793408 237 TPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQ-ELTKQEMTAAAT-----IITMLSLLGLFFY 293
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLVQgALDNGAYILLALmlitsLITMYSLFRIFFL 428
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
13-268 |
9.66e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 53.40 E-value: 9.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 13 LMLGTTITISSNHWMMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAASALVLFSS----------MTNAWFTG 82
Cdd:PRK06458 117 FLFTMLLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGDGEMAI 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 83 QW-DITQLSHPTSSLLLTTAVAM-------KLGLVPFHFWFPE-----------VLQGSSLTTALLlsTVMKFPPITILF 143
Cdd:PRK06458 197 LWtELLKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALY--AVLRYYILIDAA 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 144 LTSHSLNPtLLTAMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPKL----TLLTFYLYSLMTTTVFLT- 218
Cdd:PRK06458 275 IGSDFPGR-LLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLgifaALLHMLNHSLTKSAIFFAs 353
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 108793408 219 ---LNTTKTLNLSTLMTSWTKTPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06458 354 gnvLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-263 |
1.35e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 53.12 E-value: 1.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 29 AWtglEINTLAIIPLISKSHhPRAVEAAIKYFLVQAAASALVLFSSMTNAWFTGQWDITQLSHPTS---SLLLTTAVAM- 104
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaeKPGLTTVVAVl 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 105 -------KLGLVPFHFWFPEVLQGSSLTTALLLSTVMKFPPITIL--FLTSHSLNPT---LLTAMAIASAALGGWMGLNQ 172
Cdd:PRK12650 214 iavaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLlrFSPVFHDVAVwnwLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 173 TQTRKILAFSSISHLGWM-AIIIVYNP-KLT--LLTFYLYSLMTTTVFLTL----NTTKTLNLSTLMTSWTKTPMLNATL 244
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIvATIGVGTPfALTaaVVHTLAHALFKSSLFMLIgvvdHQAGTRDIRRLGSLWRRMPFTFVSV 373
|
250
....*....|....*....
gi 108793408 245 MLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSK 392
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
96-272 |
8.17e-07 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 50.60 E-value: 8.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 96 LLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTV-MKFPPITILFLTSHSLNPTL-----LTAMAIASAALGGWMG 169
Cdd:PRK08042 184 LLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYA 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 170 LNQTQTRKILAFSSISHLGWMAI--------IIVYNPKLTLLTFY--LY-----SLMTTTVFLTLNT----TKTLNLSTL 230
Cdd:PRK08042 264 LMEHNIQRLLAYHTLENIGIILLglgagvtgIALEQPALIALGLVggLYhllnhSLFKSVLFLGAGSvwfrTGHRDIEKL 343
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 108793408 231 MTSWTKTPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK08042 344 GGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-295 |
1.34e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 49.75 E-value: 1.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 13 LMLGTTITISSNHWMMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAA------SALVLFSSMTNAWFTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 87 TQLSHPT----------SSLLLTTAVAMKLGLVPFHFWFPEV-LQGSSLTTALLLSTVMKFPPITILFLTS-------HS 148
Cdd:PRK08676 191 TELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 149 LNPTLLTAMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPKL----TLLTFYLYSLMTTTVFLTLNTTKT 224
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLalfwMLFHMLAHSLVKSGLFFSAGILHR 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 108793408 225 LNLST----LMTSWTKTPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLG---LFFYLR 295
Cdd:PRK08676 351 QYRSDrfdrIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAAssfAIFLLK 428
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
4.03e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 48.17 E-value: 4.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 55 AAIKYFLVQAAASALVLFSSMTNAWFTGQWD------ITQ-LSHPTSSLLLTTAV---AMKLGLVPFHFWFPEVLQGSSL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQnLSLNTQLILLTGLLlgfGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 125 TTALLLSTVMK--------------FPPitilflTSHSLNPTLLTAMAIaSAALGGWMGLNQTQTRKILAFSSISHLGWM 190
Cdd:PRK07363 238 AVAILLGGVLAklgtygllrfglqlFPQ------TWSLVAPGLAIIGTI-SVIYGALSAIAQKDIKRMVAYSSIGHMGYI 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 191 AIIIVYNPKLTLL---------------TFYLYSLMTTTVfltlnTTKTLN-LSTLMTSWTKTPMLNATLMLTLLSLAGL 254
Cdd:PRK07363 311 LVAAAAGTQLSLLgavaqmishglilalLFHLVGIVERKV-----GTRDLDvLNGLMNPIRGLPLTSALLVLAGMASAGI 385
|
250
....*....|....
gi 108793408 255 PPLTGFLPKWLIIQ 268
Cdd:PRK07363 386 PGLVGFVAEFIVFQ 399
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
7-270 |
4.39e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 48.25 E-value: 4.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 7 LMSTLSL-MLGTTITISSNHWMM---AWTGLEINTLAIIPLISKSHHPRAVEAAIKYFlvqaaASALVLFSSMTNAWFTG 82
Cdd:PRK06459 74 LSSLYILtILGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFVFMAFGEL-----STVLILAGFAWAFIISG 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 83 QWDITQLSHPTSSLLLTTAVAMKLGLVPFHF--WFPEVLQGSSLTTALLLSTVMK----FPPITILFLTSHSLNPTL--- 153
Cdd:PRK06459 149 TTNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTlmgvYGILKMTILTQTIPIGYFglt 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 154 LTAMAIASAALGGWMGLNQTQTRKILAFSSISHLGWM-----AIIIVYNPKLTLLTFYLYSLMT---------TTVFLTL 219
Cdd:PRK06459 229 ILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILysfahsvakTGLFLSS 308
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 108793408 220 NTTKTLNLSTLMTSWTKTPMLNATLMLtlLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 309 GLQEKQSITYSKKIRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-268 |
6.86e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 47.66 E-value: 6.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 96 LLLTTAVAMKLGLVPFHFWFPEVL-QGSSLTTAL---LLSTVMKFPPI---TILFlTSHSLNpTLLTAMAIASAALGGWM 168
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTAVfagLLTKVGVYAIIrthTLLF-PGGGLD-TLLMVVALLTMVVGILG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 169 GLNQTQTRKILAFSSISHLGWMAIIIVYNPKLTLLTFYLYS----LMTTTVFLTL----NTTKTLNLSTLMTSWTKTPML 240
Cdd:PRK12665 291 AIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVahhiTVQTTLFLVVglieRQAGSSSLRRLGGLAKASPLL 370
|
170 180
....*....|....*....|....*...
gi 108793408 241 NATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 371 AVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-267 |
8.95e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 47.42 E-value: 8.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 96 LLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLS----TVMKFPPITI--------LFLTSHSLNpTLLTAMAIASAA 163
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSgtstKVMIYLIIRIvydvfkanFVFTTLPFN-NVFMILAALAIV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 164 LGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPKLTLLTFYLY----SLMTTTVFLT-------LNTTKTLNLSTLmt 232
Cdd:PRK12662 292 FGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVsgsisyhFGTTKLEDCLNL-- 369
|
170 180 190
....*....|....*....|....*....|....*
gi 108793408 233 sWTKTPMLNATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 370 -WKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
1.30e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 46.73 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 50 PRAVEAAIKYFLVQAAASALVLFSSMTNAWF----TGQWDITQLSHPTSSLLLTT--------AVAMKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNLPLPPGVQYwlflaffiAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 118 VLQ-----GSSLTTALLLST----VMKFPpITILFLTSHSLNPtLLTAMAIASAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK05846 237 AHVqaptaGSVLLAGILLKMgaygLLRFS-LPLFPDASHEFAP-IIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 189 W--MAIIIVYNPKLTLLTFYLYS--LMTTTVFLTLNT----TKTLNLSTLMTSWTKTPMLNATLMLTLLSLAGLPPLTGF 260
Cdd:PRK05846 315 FvtLGIFAGNQLGIQGAIFQMIShgLSSAALFLLVGVlydrLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGF 394
|
....*..
gi 108793408 261 LPKWLII 267
Cdd:PRK05846 395 VGEFLIL 401
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
1.34e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 47.13 E-value: 1.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 48 HHPRAVEAAIKYFLVQAAASALVLFSSMTNAWFTGQWDITQLSHPTSSL--------------LLTTAVAMKLGLVPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenikghplflitliLIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 114 WFPEVLQGSSLTTALLLSTVMKFPPITILFLTSHSLNPT-----LLTAMAIASAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 189 WMAIIIVYNPK------LTLLTFYL--YSLMTTTVFLTL----NTTKTLNLSTLMTSWTKTPMLNATLMLTLLSLAGLPP 256
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLlnHATFKACLFLVAgivaHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 108793408 257 LTGFLPK 263
Cdd:PRK12649 396 LNGFLSK 402
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-291 |
1.76e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 46.65 E-value: 1.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 55 AAIKYFLVQAAASALVLFSSMTNAWFTGQWDITQLSHPTSS-----LLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALL 129
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 130 LSTVMKFPPI--TILFLTShSLNPTLLTAMAI-----ASAALGGWMGLNQTQTRKILAFSSISHLGWM-------AIIIV 195
Cdd:PRK08667 243 MSGVMLKVAVygLVRFLMD-VLSPELWWGVLIllagsISALLGVIYALKEHDLKGLLAYSSIENIGIIlmgiglyVIFGV 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 196 YN-PKLTLLTF-------YLYSLMTTTVFLT----LNTTKTLNLSTLMTSWTKTPMLNATLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK08667 322 YGlDTLALLALggalfhsLNHALFKSLLFLTagsvVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASE 401
|
250 260
....*....|....*....|....*....
gi 108793408 264 WLIIQELTKQEMTAAATI-ITMLSLLGLF 291
Cdd:PRK08667 402 LLLYESFFQSFSVADPLIkILLFSVLAIF 430
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-288 |
1.80e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 46.12 E-value: 1.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 33 LEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAAS------ALVLFSSMTNAWFTGQWDITQLSHPTSSLLLTTAVAMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSlglylaAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 107 GLVPFHFWFPEVLQGSSLTTALLLSTVMKFPPITILFLTSHSLNP------TLLTAMAIASAALGGWMGLNQTQTRKILA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 181 FSSISHLGWMAIII---VYNPKLTLL--TFYL--YSLMTTTVFLTLNT----TKTLNLSTLMTSWTKTPMLNATLMLTLL 249
Cdd:PRK06525 302 YSTITQLGYMFFGLslaILGSRLALEgsIAYIfnHAFAKSLFFLVAGAlsysCGTRLLPRLRGVLKKLPLVGVGFCVAAL 381
|
250 260 270
....*....|....*....|....*....|....*....
gi 108793408 250 SLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLL 288
Cdd:PRK06525 382 AITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLL 420
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-266 |
2.27e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 45.85 E-value: 2.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 38 LAIIPL---ISKSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWFTGQWDI---TQLSH--PTSSLLLTTA-----VAM 104
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFdyePLRSHtlPLSTQLLLLApilvgFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 105 KLGLVPFHFWFPEV-LQGSSLTTALLLSTVMKFPPITIL------FLTSHSLNPTLLTAMAIASAALGGWMGLNQTQTRK 177
Cdd:PRK06473 218 KIPLVPFHTWLPDAhVEASTPVSVLLAGVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKK 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 178 ILAFSSISHLGWMAIIIVYNPKLTLL--TFYLYS--LMTTTVFLTLNT------TKTLN-LSTLMTSWTKTPMLNATLML 246
Cdd:PRK06473 298 MVAYSSIGHMGYILLAAAAATPLSILaaVFQMIShgLISALLFLLVGVvykktgSRDVDvLRGLLNPERGLPITGSLMIL 377
|
250 260
....*....|....*....|
gi 108793408 247 TLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK06473 378 GVMASAGIPGMVGFIAEFLV 397
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
86-296 |
5.09e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 44.94 E-value: 5.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 86 ITQLSHPTSSLLLTTAV------AMKLGLVPFHFWFPE----------VLQGSSLTTALLLSTVMKFppiTILFLTSHSL 149
Cdd:PRK07691 197 IAELSAGQTGLITVVAIlflfvfATKAGLFPLYFWLPGsyyappiaiaALFGALLTKVGVYAIARTF---TLFFSHDTSF 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 150 NPTLLTAMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPKLTLL--TFYLYSLM--TTTVFL----TLNT 221
Cdd:PRK07691 274 THYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIgaIYYLIHDMivKAALFLligiMIKI 353
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 108793408 222 TKTLNLSTLMTSWTKTPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRL 296
Cdd:PRK07691 354 TGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
21-300 |
7.45e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 44.39 E-value: 7.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 21 ISSNHWMMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWFTGQWDITQ----LSHPTSSL 96
Cdd:PRK06591 132 IATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDiaayLQEHTNSR 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 97 LLTTAVA-------MKLGLVPFHFWFPEVLQGSS---------LTTALLLSTVMKFPPITILFLTSHSLNPTLLTAMAIA 160
Cdd:PRK06591 212 IITIAIGffligaiLKTAFFPMHFWMMRAYNNTAsvilvylagISTIIGIYIIYKFTYIIIGYETIKTAITNFIRPIALA 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPKLTLLTFYLYSLMTTTVFLTLnttktlnLSTLMTSWTKTPmL 240
Cdd:PRK06591 292 TLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILPSLLLADSINKIALFL-------IDAYNESYKREP-N 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 241 NATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRLAYYS 300
Cdd:PRK06591 364 KVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKMVLLL 423
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-268 |
1.70e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 43.41 E-value: 1.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 111 FHFWFPEVLQGSSLTTALLLSTVMKFPPITIL-----FLTSHSLNPTLLTAMAIASAALGGWMGLNQTQTRKILAFSSIS 185
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMirsfpLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 186 HLGWMAIIIVYNPKLTLLTFYLYSLMTTTVFLTLNTTKTLNLSTL-------MTSWTKTPMLNATLMLT-LLSLAGLPPL 257
Cdd:MTH00032 324 QLGYMVLIIGIEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVdeqdmrkMGGLIHSIPFTYTMMLIgSFSIMGLPYL 403
|
170
....*....|.
gi 108793408 258 TGFLPKWLIIQ 268
Cdd:MTH00032 404 TGFYSKDLILE 414
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
86-272 |
1.96e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 43.21 E-value: 1.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 86 ITQLSHPTSSLLLTTAVAM-------KLGLVPFHFWFPEVLQGSSLTTALLLSTVMKFPPITILF-----LTSHSLNPTL 153
Cdd:PRK12646 197 LGQADHIKNHGLFIPMIFMfllgaftKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFrftplLGLSNMYIYI 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 154 LTAMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMAIII------VYNPKLTLLTFY-------LYSLMTTTVF---- 216
Cdd:PRK12646 277 VTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggyAQHQQDAIASIYvfvlfaaLFHLMNHAIFkcal 356
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 108793408 217 -----LTLNTTKTLNLSTLMTSWTKTPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK12646 357 fmgvgIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
8-296 |
3.20e-04 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 42.45 E-value: 3.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 8 MSTLSLMLGTTITISSNHWMMAWTGLEINTLAIIPLISKSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAWFTGQWDIT 87
Cdd:PRK08377 112 MLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 88 QLSHPTSSL----------LLTTAVAMKLGLVPFHFWFPEVLQGSSL-TTALLLSTVMK---FPPITILFLTSHSLNPT- 152
Cdd:PRK08377 192 HIAQLAGTIdptvaqvglaLLIFGLAVEAELFPLNAWAPDAYQAAPHpITVMFSAFVVKaglYAMARILYLMQNANGWSs 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 153 ---LLTAMAIASAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIVYNPKL----TLLTFYLYSLMTTTVFLTLN----T 221
Cdd:PRK08377 272 vlkLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdaGVFHMINHAIVKALLFLAVGyvgiT 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 108793408 222 TKTLNLSTLMTSWTKTPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITMLSLLGLFFYLRL 296
Cdd:PRK08377 352 LGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
4.83e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.83 E-value: 4.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 101 AVAMKLGLVPFHFWFPEV-----LQGSSLTTALLLS------TVMKFPpitILFLTSHSLNPTLLtAMAIASAALGGWMG 169
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKlggyglVRLSWP---ILPLGAQNLAPAVI-AMGIVGIVYGSFAT 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 170 LNQTQTRKILAFSSISHLGWMAIIIVYNPKL----TLLTFYLYSLMTTTVFLTLNTTKTLNLSTLMTSW----TKTPMLN 241
Cdd:MTH00226 315 CRQIDVKRLVAYSSVAHMGLVSITLVTHDIIgltgSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYrglsITMPIWG 394
|
170 180
....*....|....*....|....*.
gi 108793408 242 ATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 395 TIMIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-268 |
9.54e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 40.90 E-value: 9.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 82 GQWDITQLSH----PTSSLLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTVMKFPPITIL-----FLTSHSLNPT 152
Cdd:MTH00207 165 GHWSITNMWQtdmnNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLirfypFLSSTYWFNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 153 LLTAMAIASAALGGWMGLNQTQTRKILAFSSISHLG-WMAIIIVYNPKLTLLTFYLYSLMTTTVFLTLNTT-----KTLN 226
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFVCAGSLihshhHSQD 324
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 108793408 227 LSTLMTSWTKTPMLNATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 325 LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
105-284 |
1.20e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 40.57 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 105 KLGLVPFHFWFPEVLQGSSLTTALLLSTVM----KFPPITILFLTSHSLNPTLLTAM-------AIASAALGGWMGLNQT 173
Cdd:PRK06589 223 KTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLQRIFAEfnwlifiPIVSIFYSSLKALKTD 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 174 QTRKILAFSSISHLGW--MAIIIVYNPKLTLLTFYL--YSLMTTTVFLTLNT----TKTLNLSTLMTSWTKTPMLNATLM 245
Cdd:PRK06589 303 NIKKILAYSTISQLSLalLSAFILTPKALGAAILHLvsHSFAKICLFYSMGSiyslKKEDQVDKLHGTSKSFPLISFIIS 382
|
170 180 190
....*....|....*....|....*....|....*....
gi 108793408 246 LTLLSLAGLPPLTGFLPKWLIIQELTKQEMTAAATIITM 284
Cdd:PRK06589 383 ISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
5-190 |
1.23e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 40.45 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 5 AKLMSTLSlmlGTTITISSNHW---MMAW--TGLEINTLaiipLISKSHHPRAVEAAIKYFLVQAAASALVLFSSMTNAW 79
Cdd:PRK08168 104 RALAGVLA---AVHLLVLSDHLlvlIAAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYL 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 108793408 80 FTGQWDITQL---------SHP--TSSLLLTTAVAMKLGLVPFHFWFPEVLQGSSLTTALLLSTV--------MKFPPit 140
Cdd:PRK08168 177 EVGSLSLSALwahlaaqgaSPSlqAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVvnlggfvlIRFAP-- 254
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 108793408 141 iLFLTSHSLNpTLLTAMAIASAALGGWMGLNQTQTRKILAFSSISHLGWM 190
Cdd:PRK08168 255 -LLEQAPPAR-WLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFM 302
|
|
| |
