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Conserved domains on  [gi|47606353|ref|NP_001001271|]
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olfactory receptor Olr81 [Rattus norvegicus]

Protein Classification

G protein-coupled receptor family protein( domain architecture ID 705710)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tm_GPCRs super family cl28897
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
29-301 8.05e-153

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


The actual alignment was detected with superfamily member cd15952:

Pssm-ID: 475119  Cd Length: 274  Bit Score: 428.72  E-value: 8.05e-153
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  29 WISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIH 108
Cdd:cd15952   2 WIGFPFCAVYLIALLGNCTILFVIKTEQSLHQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFIH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 109 ALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIA 188
Cdd:cd15952  82 TFTGMESAVLVAMAFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGHNIIPHTYCEHMGIA 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 189 KLSCGNIHINAVYGLFVVSFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGH 268
Cdd:cd15952 162 KLACASIRINIIYGLFAISVLVLDVILIALSYVLILRAVFRLPSHDARLKALSTCGSHVCVILAFYTPALFSFLTHRFGH 241
                       250       260       270
                ....*....|....*....|....*....|...
gi 47606353 269 NIPHYIHILVANLYLVIPPFLNPIIYGVRTKQI 301
Cdd:cd15952 242 NIPRYIHILLANLYVVLPPMLNPVIYGVRTKQI 274
 
Name Accession Description Interval E-value
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
29-301 8.05e-153

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 428.72  E-value: 8.05e-153
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  29 WISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIH 108
Cdd:cd15952   2 WIGFPFCAVYLIALLGNCTILFVIKTEQSLHQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFIH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 109 ALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIA 188
Cdd:cd15952  82 TFTGMESAVLVAMAFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGHNIIPHTYCEHMGIA 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 189 KLSCGNIHINAVYGLFVVSFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGH 268
Cdd:cd15952 162 KLACASIRINIIYGLFAISVLVLDVILIALSYVLILRAVFRLPSHDARLKALSTCGSHVCVILAFYTPALFSFLTHRFGH 241
                       250       260       270
                ....*....|....*....|....*....|...
gi 47606353 269 NIPHYIHILVANLYLVIPPFLNPIIYGVRTKQI 301
Cdd:cd15952 242 NIPRYIHILLANLYVVLPPMLNPVIYGVRTKQI 274
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
34-309 5.76e-99

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 292.48  E-value: 5.76e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353    34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:pfam13853   1 FCLMYLIIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353   114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:pfam13853  81 ESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSCA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353   194 NIHINAVYGLFVV-SFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNIPH 272
Cdd:pfam13853 161 DIKVNNIYGLFVVtSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRFGHNVPP 240
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 47606353   273 YIHILVANLYLVIPPFLNPIIYGVRTKQIRERVLHIF 309
Cdd:pfam13853 241 LLQIMMANAYLFFPPVLNPIVYSVKTKQIRDCVKRML 277
 
Name Accession Description Interval E-value
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
29-301 8.05e-153

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 428.72  E-value: 8.05e-153
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  29 WISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIH 108
Cdd:cd15952   2 WIGFPFCAVYLIALLGNCTILFVIKTEQSLHQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFIH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 109 ALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIA 188
Cdd:cd15952  82 TFTGMESAVLVAMAFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGHNIIPHTYCEHMGIA 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 189 KLSCGNIHINAVYGLFVVSFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGH 268
Cdd:cd15952 162 KLACASIRINIIYGLFAISVLVLDVILIALSYVLILRAVFRLPSHDARLKALSTCGSHVCVILAFYTPALFSFLTHRFGH 241
                       250       260       270
                ....*....|....*....|....*....|...
gi 47606353 269 NIPHYIHILVANLYLVIPPFLNPIIYGVRTKQI 301
Cdd:cd15952 242 NIPRYIHILLANLYVVLPPMLNPVIYGVRTKQI 274
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
28-301 9.50e-134

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 380.48  E-value: 9.50e-134
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  28 AWISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLI 107
Cdd:cd15917   1 IWLSIPFCAMYLVALLGNITILFVIKIESSLHEPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMFFI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 108 HALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSI 187
Cdd:cd15917  81 HSFTAMESGVLLAMAFDRYVAICYPLRYTTILTNTVVGKIGLAILLRAVALIIPLPLLVRRLPYCGSNVISHSYCEHMAV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 188 AKLSCGNIHINAVYGLFVVSFFL-LNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRF 266
Cdd:cd15917 161 VKLACGDTRVNSIYGLFVALLIVgFDLLFIALSYVLILRAVLQLPSKEARLKALSTCGSHICVILIFYTPALFSFLTHRF 240
                       250       260       270
                ....*....|....*....|....*....|....*
gi 47606353 267 GHNIPHYIHILVANLYLVIPPFLNPIIYGVRTKQI 301
Cdd:cd15917 241 GHHVPPHVHILLANLYLLLPPMLNPIVYGVRTKQI 275
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
29-301 1.83e-133

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 379.71  E-value: 1.83e-133
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  29 WISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIH 108
Cdd:cd15221   2 WISIPFCSMYIVALLGNSLLLFVIVTERSLHEPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFVH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 109 ALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIA 188
Cdd:cd15221  82 FVFVTESAILLAMAFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFCIVFPFVFLLKRLPYCGHNVIPHTYCEHMGIA 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 189 KLSCGNIHINAVYGLFV-VSFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFG 267
Cdd:cd15221 162 RLACADITVNIWYGLTVaLLTVGLDVVLIAVSYALILRAVFRLPSKDARLKALSTCGSHVCVILMFYTPAFFSFLTHRFG 241
                       250       260       270
                ....*....|....*....|....*....|....
gi 47606353 268 HNIPHYIHILVANLYLVIPPFLNPIIYGVRTKQI 301
Cdd:cd15221 242 RHIPRHVHILLANLYVLVPPMLNPIVYGVKTKQI 275
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
28-301 2.23e-125

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 359.35  E-value: 2.23e-125
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  28 AWISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLI 107
Cdd:cd15951   1 VWISIPFCIMYAVALLGNFTILFIVKTEPSLHEPMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 108 HALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSI 187
Cdd:cd15951  81 HSFSTMESGIFVAMALDRYVAICNPLRHSTILTNSVVAKIGLAVVLRGGILVSPHPFLLRRLPYCRTNIIPHTYCEHMAV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 188 AKLSCGNIHINAVYGLFVVSFFL-LNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRF 266
Cdd:cd15951 161 VKLACADTRVSRAYGLSVAFLVGgLDVIFIAVSYIQILRAVFKLPSKEARLKTFGTCGSHICVILVFYIPALFSFLTHRF 240
                       250       260       270
                ....*....|....*....|....*....|....*
gi 47606353 267 GHNIPHYIHILVANLYLVIPPFLNPIIYGVRTKQI 301
Cdd:cd15951 241 GHNVPPHVHILIANVYLLVPPMLNPIIYGVRTKQI 275
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
29-301 6.71e-125

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 357.97  E-value: 6.71e-125
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  29 WISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIH 108
Cdd:cd15222   2 WISIPFCLLYLVALLGNSTILFVIKTEPSLHEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFIH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 109 ALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIA 188
Cdd:cd15222  82 TFSFMESSVLLAMAFDRFVAICNPLRYASILTNSRIAKIGLAIVLRSVLLLLPLPFLLKRLPFCHSNVLSHSYCLHQDVM 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 189 KLSCGNIHINAVYGLFVVSF-FLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFG 267
Cdd:cd15222 162 KLACSDTRVNSIYGLFVVLStMGLDSLLILLSYVLILKTVLGIASREERLKALNTCVSHICAVLIFYVPMIGLSMVHRFG 241
                       250       260       270
                ....*....|....*....|....*....|....
gi 47606353 268 HNIPHYIHILVANLYLVIPPFLNPIIYGVRTKQI 301
Cdd:cd15222 242 KHASPLVHVLMANVYLLVPPVLNPIIYSVKTKQI 275
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
29-301 4.18e-122

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 351.18  E-value: 4.18e-122
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  29 WISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIH 108
Cdd:cd15953   2 WISIPFCLMYIVTLLGNCTILFVVGKEQSLHKPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFIH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 109 ALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIA 188
Cdd:cd15953  82 TLSIMESAVLVAMAFDRYVAICNPLRYATILTNSRIAKLGLVGLIRGVLLILPLPLLLSRLPFCANRIIPHTYCEHMAVV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 189 KLSCGNIHINAVYGLFVVSFFL-LNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFG 267
Cdd:cd15953 162 KLACGDTTINRIYGLVVALLVVgLDLLLIALSYALIIRAVLRLSSKKARQKALNTCTAHICVILMSYTPALFSFLTHRFG 241
                       250       260       270
                ....*....|....*....|....*....|....
gi 47606353 268 HNIPHYIHILVANLYLVIPPFLNPIIYGVRTKQI 301
Cdd:cd15953 242 QGIAPHIHIILANLYLLVPPMLNPIIYGVKTKEI 275
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
29-301 5.50e-116

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 335.54  E-value: 5.50e-116
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  29 WISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIH 108
Cdd:cd15950   2 WIAIPFCSMYVIALLGNGTILLVIKLDPSLHEPMYYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMFFVH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 109 ALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIA 188
Cdd:cd15950  82 SFTAVESGVLLAMAFDRYVAICHPLRYSAILTSQVIAQIGLAIVLRALLFMTPLTCLVTSLPYCGSRVVPHSYCEHMAVV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 189 KLSCGNIHINAVYGLFVVSFFL-LNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFG 267
Cdd:cd15950 162 KLACADPRPSSLYSITGSTLVVgTDSAFIAVSYGLILRAVLGLSSKEARLKAFSTCGSHVCVILLFYIPGLLSIYTQRFG 241
                       250       260       270
                ....*....|....*....|....*....|....
gi 47606353 268 HNIPHYIHILVANLYLVIPPFLNPIIYGVRTKQI 301
Cdd:cd15950 242 QGVPPHTQVLLADLYLLVPPMLNPIIYGMRTKQI 275
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
12-302 1.31e-107

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 314.79  E-value: 1.31e-107
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  12 PATFFLIGIPGLEEIHAWISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFD 91
Cdd:cd15949   1 PSTFILLGIPGLEPLHVWISIPFCSMYLIAVLGNCTILFIIKSEPSLHQPMYFFLSMLAIIDLVLSTSTMPKLLAIFWFS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  92 AHEINFGGCVAQMFLIHALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPF 171
Cdd:cd15949  81 SNEIPLHACLLQMFLIHSFSAIESGIFLAMAFDRYVAICNPLRHKTILTNTTVIRIGLAAVIRGVLYISPLPLLVRRLPW 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 172 CQAHVIAHSYCEHMSIAKLSCGNIHINAVYGLfVVSFF--LLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAV 249
Cdd:cd15949 161 YRTNIIAHSYCEHMAVVGLACGDVSINNHYGL-TIGFLvlIMDSLFIVLSYIMILRVVQRLATSEARLKTFGTCVSHVCA 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 47606353 250 LCVFYIPSVFSFLTHRFGHNIPHYIHILVANLYLVIPPFLNPIIYGVRTKQIR 302
Cdd:cd15949 240 ILAFYVPIAVSSLIHRFGQNVPPPTHILLANFYLLIPPMLNPIVYGVRTKQIQ 292
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
28-305 4.74e-106

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 310.38  E-value: 4.74e-106
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  28 AWISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLI 107
Cdd:cd15223   1 HWLSLPFLLLYLVALVANSLLLLIIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 108 HALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSI 187
Cdd:cd15223  81 HFFTAMESSILLVMALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMAL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 188 AKLSCGNIHINAVYGLFVVSFFL-LNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRF 266
Cdd:cd15223 161 VSLACGDTTINSIYGLAVAWLIVgSDIILIFFSYALILRAVLRLASGEARSKALNTCGSHLIVILFFYTAVLVSSLTYRF 240
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47606353 267 GHNIPHYIHILVANLYLVIPPFLNPIIYGVRTKQIRERV 305
Cdd:cd15223 241 GKTIPPDVHVLLSVLYILIPPALNPIIYGVRTKEIRQGF 279
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
27-302 5.42e-102

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 300.28  E-value: 5.42e-102
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  27 HAWISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFL 106
Cdd:cd15948   1 HPWISIPFCSAFTVALLGNCTLLYVIKTEPSLHEPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 107 IHALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMS 186
Cdd:cd15948  81 LHSFSIMESAVLLAMAFDRYVAICNPLRYATILTNSVITKIGLAALARAVTLMTPLPFLLRRLPYCRSHVIAHCYCEHMA 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 187 IAKLSCGNIHINAVYGLFVVSFFL-LNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHR 265
Cdd:cd15948 161 VVKLACGDTRFNNIYGIAVALFIVgLDLMFIILSYVFILRAVLSLASKEEQLKAFGTCGSHICAILVFYTPVVLSSTMHR 240
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47606353 266 FGHNIPHYIHILVANLYLVIPPFLNPIIYGVRTKQIR 302
Cdd:cd15948 241 FARHVAPHVHILLANFYLLFPPMMNPIVYGVKTKQIR 277
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
34-309 5.76e-99

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 292.48  E-value: 5.76e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353    34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:pfam13853   1 FCLMYLIIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353   114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:pfam13853  81 ESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSCA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353   194 NIHINAVYGLFVV-SFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNIPH 272
Cdd:pfam13853 161 DIKVNNIYGLFVVtSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRFGHNVPP 240
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 47606353   273 YIHILVANLYLVIPPFLNPIIYGVRTKQIRERVLHIF 309
Cdd:pfam13853 241 LLQIMMANAYLFFPPVLNPIVYSVKTKQIRDCVKRML 277
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
29-301 7.76e-98

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 289.36  E-value: 7.76e-98
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  29 WISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIH 108
Cdd:cd15955   2 WIGIPFCIMFLLAVLGNCTLLIVIKRERSLHQPMYIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFIH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 109 ALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIY-RLPFCQAHVIAHSYCEHMSI 187
Cdd:cd15955  82 TLQAFESGILLAMALDRYVAICHPLRHSSILTPQVLLGIGVLVVVRAVVLIIPCPLLIKlRLHHFRSTVISHSYCEHMAV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 188 AKLSCGNIHINAVYGLFVV-SFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRF 266
Cdd:cd15955 162 VKLAADDVRVNKIYGLFVAfSILGFDIIFITTSYALIFRAVFRLPQKEARLKAFNTCTAHIFVFLLFYTLAFFSFFAHRF 241
                       250       260       270
                ....*....|....*....|....*....|....*
gi 47606353 267 GHNIPHYIHILVANLYLVIPPFLNPIIYGVRTKQI 301
Cdd:cd15955 242 GHHVAPYVHILLSNLYLLVPPVLNPIVYGVKTKQI 276
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
29-301 1.09e-97

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 289.07  E-value: 1.09e-97
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  29 WISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIH 108
Cdd:cd15956   2 WLSLPFCFIYVLSLLGNGVLLSVVWKEHRLHQPMFLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLVH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 109 ALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIA 188
Cdd:cd15956  82 AFSAMESGVLVAMALDRFVAICNPLHYATILTLEVVAKAGLLLALRGVAIVIPFPLLVCRLSFCASHTIAHTYCEHMAVV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 189 KLSCGNIHINAVYGlFVVSFFL--LNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRF 266
Cdd:cd15956 162 KLACGATTVDSLYG-LALALFIggGDVLFIAYSYGLIVKTVLRLPSPEARGKAFSTCSAHICVILFFYIPGLLSVLMHRF 240
                       250       260       270
                ....*....|....*....|....*....|....*
gi 47606353 267 GHNIPHYIHILVANLYLVIPPFLNPIIYGVRTKQI 301
Cdd:cd15956 241 GHSVPSAAHVLLSNLYLLLPPALNPIVYGIRTKQI 275
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
29-301 1.12e-89

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 268.62  E-value: 1.12e-89
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  29 WISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIH 108
Cdd:cd15954   2 WISIPFCFMYIIAMVGNCGLLYLIWIEEALHRPMYYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFVH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 109 ALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIA 188
Cdd:cd15954  82 TFTGMESGVLMLMALDRYVAICYPLRYATILTNPVITKAGLATFLRGVMLIIPFPLLTKRLPYCRGNFIPHTYCDHMSVV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 189 KLSCGNIHINAVYGLFVVSFF-LLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRF- 266
Cdd:cd15954 162 KLACANIRVDAIYGLMVALLIgGFDILCISVSYAMILRAVVSLSSKEARSKAFSTCTAHICAIVITYTPAFFTFFAHRFg 241
                       250       260       270
                ....*....|....*....|....*....|....*
gi 47606353 267 GHNIPHYIHILVANLYLVIPPFLNPIIYGVRTKQI 301
Cdd:cd15954 242 GHHITPHIHIIMANLYLLLPPMMNPIVYGVKTKQI 276
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
28-297 4.83e-79

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 241.23  E-value: 4.83e-79
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  28 AWISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLI 107
Cdd:cd13954   1 ILLFVLFLLIYLLTLLGNLLIILLVRLDSRLHTPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 108 HALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSI 187
Cdd:cd13954  81 FSLGGTECFLLAVMAYDRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVLISQLPFCGSNVINHFFCDIPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 188 AKLSCGNIHINAVYGLFVVSFFLL-NLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRF 266
Cdd:cd13954 161 LKLSCSDTSLNELVIFILAGFVGLgSFLLTLVSYIYIISTILKIPSAEGRQKAFSTCASHLTVVSLFYGTIIFMYVRPSS 240
                       250       260       270
                ....*....|....*....|....*....|.
gi 47606353 267 GHniPHYIHILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd13954 241 SY--SSDLDKVVSVFYTVVTPMLNPIIYSLR 269
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
34-303 2.62e-64

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 203.84  E-value: 2.62e-64
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15225   7 FLLIYLVTLLGNLLIILITKVDPALHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFFLFLGGT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15225  87 ECFLLAAMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSNEINHFFCDIPPVLKLACA 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVYGLFVVSFFLL-NLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNIPh 272
Cdd:cd15225 167 DTSLNEIAIFVASVLVILvPFLLILVSYIFIISTILKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRPKSSYSPE- 245
                       250       260       270
                ....*....|....*....|....*....|.
gi 47606353 273 yIHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15225 246 -TDKLLSLFYTVVTPMLNPIIYSLRNKEVKG 275
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
30-303 2.35e-61

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 196.33  E-value: 2.35e-61
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  30 ISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHA 109
Cdd:cd15231   3 LFLIFLIIYLVTLLGNLLIITLVLLDSHLHTPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFFVS 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 110 LTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAK 189
Cdd:cd15231  83 FVGTECLLLAVMAYDRYVAICNPLHYAVIMSRKVCLQLAAASWLCGFLNSAVHTVLTFRLSFCGSNQISHFFCDIPPLLK 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 190 LSCGNIHINAVYgLFVVSFF--LLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFG 267
Cdd:cd15231 163 LSCSDTSLNEVL-LLVASVFigLTPFLFIVISYVYIISTILKIRSAEGRRKAFSTCASHLTVVTLFYGTAIFNYNRPSSG 241
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 47606353 268 HNIphYIHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15231 242 YSL--DKDTLISVLYSIVTPMLNPIIYSLRNKEVKG 275
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
34-297 4.11e-60

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 192.83  E-value: 4.11e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15918   7 FLGMYLVTVLGNLLIILAIGSDSHLHTPMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYFFLLFGDL 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHV-LMGISICVVVRptlFICPMIY--LIYRLPFCQAHVIAHSYCEHMSIAKL 190
Cdd:cd15918  87 DNFLLAVMAYDRYVAICHPLHYTTIMSPRLcILLVAASWVIT---NLHSLLHtlLMARLSFCASNEIPHFFCDLNPLLKL 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 191 SCGNIHINAVYGLFVVSF-FLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHN 269
Cdd:cd15918 164 SCSDTHLNELVILVLGGLvGLVPFLCILVSYVRIVSAVLRIPSAGGKWKAFSTCGSHLSVVSLFYGTVIGVYLSPPSSHS 243
                       250       260
                ....*....|....*....|....*...
gi 47606353 270 IPHyiHILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15918 244 ASK--DSVAAVMYTVVTPMLNPFIYSLR 269
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
34-303 4.44e-60

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 193.21  E-value: 4.44e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15235   8 FLAMYLLTLLGNLLIVLLIRSDPRLHTPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMYFFIAFGNT 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15235  88 DSFLLAVMAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGSNEIPHFFCDLQPLLKLSCS 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVYGLFVVSF-FLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFY---------IPSVFSFLT 263
Cdd:cd15235 168 DTSLNELLIFTEGAVvVLGPFLLIVLSYARILAAVLKVPSAAGRRKAFSTCGSHLTVVALFYgtiigvyfqPSSSYSADK 247
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 47606353 264 HRFghniphyihilVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15235 248 DRV-----------ATVMYTVVTPMLNPFIYSLRNKDVKG 276
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
34-297 1.77e-59

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 191.13  E-value: 1.77e-59
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15227   7 FLLIYLAALTGNLLIITVVTLDHHLHTPMYFFLKNLSFLDLCYISVTVPKSIANSLTNTRSISFLGCVAQVFLFIFFAAS 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTIltshvlMGISICVVVRPTLFICPMIYLI------YRLPFCQAHVIAHSYCEHMSI 187
Cdd:cd15227  87 ELALLTVMAYDRYVAICHPLHYEVI------MNRGACVQMAAASWLSGLLYGAlhtantFSLPFCGSNVIHQFFCDIPQL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 188 AKLSCGNIHINaVYGLFVVSFFL--LNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLthR 265
Cdd:cd15227 161 LKLSCSDTYLN-EIGVLVLSVCLglGCFVFIIVSYVHIFSTVLRIPSAQGRSKAFSTCLPHLIVVSLFLSTGSFAYL--K 237
                       250       260       270
                ....*....|....*....|....*....|..
gi 47606353 266 FGHNIPHYIHILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15227 238 PPSDSPSLLDLLLSVFYSVVPPTLNPIIYSLR 269
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
37-299 3.69e-58

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 188.14  E-value: 3.69e-58
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGMEAE 116
Cdd:cd15421  10 IFLVALTGNALLILLIWLDSRLHTPMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQIFFFLTLGGAECL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 117 VLMAMAFDRYVAICVPLHYTTILTSHV--LMGISICVVVrptlFICPMIYLIY--RLPFCQAHVIAHSYCEHMSIAKLSC 192
Cdd:cd15421  90 LLALMAYDRYVAICHPLRYPVLMSPRVclLMAAGSWLGG----SLNSLIHTVYtmHFPYCGSREIHHFFCEVPALLKLSC 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 193 GNIHI--NAVYGLFVVsFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNI 270
Cdd:cd15421 166 ADTSAyeTVVYVSGVL-FLLIPFSLILASYALILLTVLRMRSAEGRKKALATCSSHLTVVSLYYGPAIFTYMRPGSYHSP 244
                       250       260
                ....*....|....*....|....*....
gi 47606353 271 PHyiHILVANLYLVIPPFLNPIIYGVRTK 299
Cdd:cd15421 245 EQ--DKVVSVFYTILTPMLNPLIYSLRNK 271
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
34-297 1.53e-56

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 183.57  E-value: 1.53e-56
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15939   7 FLLIYLATVLGNLLIVVTIKASQTLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFAEHFFGGA 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15939  87 EIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFPLLKLACT 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHinaVYGLFVVS----FFLLNLVLIGISYGYILHAVfRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLthRFGHN 269
Cdd:cd15939 167 DTY---VIGLLVVAnsglICLLSFLILLISYIVILYSL-RTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYM--RPVTT 240
                       250       260
                ....*....|....*....|....*...
gi 47606353 270 IPhyIHILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15939 241 FP--IDKVVAVFYTIITPMLNPLIYTLR 266
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
30-303 2.72e-56

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 183.29  E-value: 2.72e-56
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  30 ISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHA 109
Cdd:cd15411   3 LFVLFLVIYVITVMGNLGMILLIRADSQLHTPMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFFIA 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 110 LTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISicVVVRPTLFICPMI--YLIYRLPFCQAHVIAHSYCEHMSI 187
Cdd:cd15411  83 LATTECFLLGLMAYDRYVAICNPLLYTVVMSRRVCLKLA--AGSYAAGFLNSLIhtTLISRLSFCGSNVINHFFCDTPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 188 AKLSCGNIHINAVYGLFVVSFFLL-NLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLthRF 266
Cdd:cd15411 161 LKLSCSDTHVNEMLIFILAGLTLVgSLLIILVSYTYILSTILKIRSAEGRRKAFSTCASHLTAVTIFYGTGIFTYL--RP 238
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47606353 267 GHNIPHYIHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15411 239 SSSYSLGQDKVASVFYTVVIPMLNPLIYSLRNKEVKN 275
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
34-297 3.30e-56

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 183.07  E-value: 3.30e-56
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15911   7 FLVIYIVTMAGNILIIVLVVADRHLHTPMYFFLGNLSCLEICYTSTILPRMLASLLTGDRTISVSGCIVQFYFFGSLAAT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15911  87 ECYLLAVMSYDRYLAICKPLHYASLMNGRLCLQLAAGSWISGFLASTITVILMSQLTFCGPNEIDHFFCDFAPLLKLSCS 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVYGLFVVSFF-LLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFY--------IPSVfsflth 264
Cdd:cd15911 167 DTSLVELVTFILSSIVtLPPFLLTLTSYICIISTILRIPSTTGRQKAFSTCSSHLIVVTIFYgtliivyvVPST------ 240
                       250       260       270
                ....*....|....*....|....*....|...
gi 47606353 265 rfghNIPHYIHILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15911 241 ----NTSRDLNKVFSLFYTVLTPLVNPLIYSLR 269
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
34-303 3.99e-56

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 182.80  E-value: 3.99e-56
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15229   7 FLVIYLLTLLGNLLIMLVIRADSHLHTPMYFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFFFFFFAGT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15229  87 EAFLLSAMAYDRYAAICHPLHYVQIMSKQVCVQLVGGAWALGFLYALINTLLLLNLHFCGPNEINHFSCELPSLLPLSCS 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHIN-AVYGLFVVSFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNIPh 272
Cdd:cd15229 167 DTFANkMVLLTSSVIFGLGSFLLTLVSYIHIISTILRIRSAEGRSKAFSTCSSHLTVVGLFYGTGFFRYLRPNSASSSV- 245
                       250       260       270
                ....*....|....*....|....*....|.
gi 47606353 273 yIHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15229 246 -LDRVFSIQYSILTPMLNPIIYSLKNKEVKA 275
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
34-297 7.21e-56

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 181.94  E-value: 7.21e-56
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15230   7 FLLIYLITLVGNLGMIVLIRIDSRLHTPMYFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFFFAVFGTT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVlmgiSICVVVRPTL--FICPMIY--LIYRLPFCQAHVIAHSYCEHMSIAK 189
Cdd:cd15230  87 ECFLLAAMAYDRYVAICNPLLYTVIMSKRV----CIQLVAGSYLcgFVNSIVHtsSTFSLSFCGSNVINHFFCDIPPLLK 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 190 LSCGNIHINAVYgLFVVSFF--LLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLThrfg 267
Cdd:cd15230 163 LSCSDTHINELV-LFAFSGFigLSTLLIILISYLYILITILRIRSAEGRRKAFSTCASHLTAVSLFYGTLIFMYLR---- 237
                       250       260       270
                ....*....|....*....|....*....|....*
gi 47606353 268 hniPHYIHIL-----VANLYLVIPPFLNPIIYGVR 297
Cdd:cd15230 238 ---PSSSYSLdqdkvVSVFYTVVIPMLNPLIYSLR 269
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
34-303 1.49e-55

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 181.37  E-value: 1.49e-55
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15420   7 FSLLYIFTLLGNGLILGLIWLDSRLHTPMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLFLALAHT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15420  87 ECVLLAVMSYDRYVAICHPLRYTVIMNWRVCTTLAATSWACGFLLALVHVVLLLRLPFCGPNEVNHFFCEILAVLKLACA 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVYGLFVVSFFLLN-LVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHniPH 272
Cdd:cd15420 167 DTWINEILIFAGCVFILLGpFSLILISYLHILAAILKIQSAEGRRKAFSTCSSHLCVVGLFYGTAMFMYMVPGSSN--SA 244
                       250       260       270
                ....*....|....*....|....*....|.
gi 47606353 273 YIHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15420 245 EQEKILSLFYSLFNPMLNPLIYSLRNKQVKG 275
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
32-297 2.04e-55

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 180.76  E-value: 2.04e-55
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  32 LPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALT 111
Cdd:cd15912   5 LLLLLTYLLTLLGNLLIITITLVDHRLHTPMYFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSFFYFFLG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 112 GMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLS 191
Cdd:cd15912  85 TTEFFLLAVMSFDRYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTILVFQLPFCGPNVINHFFCDSGPLLKLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 192 CGNIHINAVYGLFVVSFFLL-NLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFL----THRF 266
Cdd:cd15912 165 CSDTRLIELLDFILASVVLLgSLLLTIVSYIYIISTILRIPSASGRQKAFSTCASHLTVVSIFYGSCIFMYVrpsqSSSL 244
                       250       260       270
                ....*....|....*....|....*....|.
gi 47606353 267 GHNiphyihILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15912 245 DLN------KVVALLNTVVTPLLNPFIYTLR 269
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
34-303 3.47e-55

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 180.58  E-value: 3.47e-55
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15419   7 FLVIYMVTVLGNIGMIIIISTDSRLHTPMYFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFFFSLFGTT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYttiltsHVLMGISICVVVRPTLFICPMIYLI------YRLPFCQAHVIAHSYCEHMSI 187
Cdd:cd15419  87 EGFLLAAMAYDRFIAICNPLLY------PVIMSRRVCVQLVAGSYLCGCINSIiqtsftFSLSFCGSNEIDHFFCDVPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 188 AKLSCGNIHINAVYGLFVVSFFLLNLVL-IGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRF 266
Cdd:cd15419 161 LKLSCSDTFINELVMFVLCGLIIVSTILvILVSYAYILSTILRIPSAEGRKKAFSTCASHLTAVSLFYGTVFFMYAQPGA 240
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47606353 267 GHNiPHYIHIlVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15419 241 VSS-PEQSKV-VSVFYTLVIPMLNPLIYSLRNKDVKE 275
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
37-297 4.27e-54

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 177.43  E-value: 4.27e-54
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGMEAE 116
Cdd:cd15947  10 FYLLTLLGNTAIILLSLLDPRLHTPMYFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYIFLWLGSTECV 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 117 VLMAMAFDRYVAICVPLHYTTILTSHV---LMGISICVVVRPTLFICPmiyLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15947  90 LLAVMAFDRYVAVCRPLHYTVIMHPRLcvqLAALSWLSGLANSLLQTT---LTLQLPLCGHHTLDHFFCEVPALIKLACV 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVyGLFVVS--FFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLthRFGHNIP 271
Cdd:cd15947 167 DTTFNEL-ELFVASvfFLLVPLSLILVSYGFIARAVLRIKSAEGRRKAFGTCSSHLLVVSLFYGTAIYMYL--QPPSSYS 243
                       250       260
                ....*....|....*....|....*.
gi 47606353 272 HYIHILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15947 244 QDQGKFISLFYTVVTPTLNPLIYTLR 269
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
34-297 5.34e-54

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 177.06  E-value: 5.34e-54
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15232   7 FLFLYAAALTGNSLIILAISTSPKLHTPMYFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFFTWSLGS 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15232  87 ELLLLTAMAYDRYVAICHPLHYSTIMRKEVCVGLATGVWAIGMLNSAVHTGLMLRLSFCGPNIINHFFCEIPPLLLLSCS 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVYgLFVVSFFL--LNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNIP 271
Cdd:cd15232 167 DTSLNEIM-AFVADVFFgvGNFLLTLTSYGFIIRSILRIRSTEGKKKAFSTCSSHLIVVSLYYSTVIYTYIRPSSSYSPE 245
                       250       260
                ....*....|....*....|....*.
gi 47606353 272 HYihILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15232 246 KD--KVVAVLYSVVTPTLNPLIYSLR 269
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
15-303 8.53e-54

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 177.56  E-value: 8.53e-54
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  15 FFLIGIPGLEEIHAWISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHE 94
Cdd:cd15943   2 FILLGLTDNPELQVILFAVFLVIYLITLVGNLGMIVLIRLDSRLHTPMYFFLSHLSFLDLCYSSAITPKMLVNFLAENKT 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  95 INFGGCVAQMFLIHALTGMEAEVLMAMAFDRYVAICVPLHYTtiltshVLMGISICVVVRPTLFICPMI------YLIYR 168
Cdd:cd15943  82 ISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAICNPLLYT------VIMSPRVCIQLVAGSYLIGFVnaliqtICTFR 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 169 LPFCQAHVIAHSYCEHMSIAKLSCGNIHINAVYgLFVVSFFL--LNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSH 246
Cdd:cd15943 156 LPFCGSNVINHFFCDVPPLLKLSCSDTHVNEIV-LFAFAIFLgiFTSLEILVSYVYILSAILRIHSSEGRRKAFSTCASH 234
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 47606353 247 VAVLCVFYIPSVFSFLTHRFGHNIPHyiHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15943 235 LMAVTIFYGTTLFMYLRPSSSYSLDQ--DKVVSVFYTVVIPMLNPLIYSLRNKEVKD 289
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
15-302 1.89e-53

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 176.36  E-value: 1.89e-53
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  15 FFLIGIPGLEEIHAWISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHE 94
Cdd:cd15408   1 FILLGFTDQPELQVLLFVVFLLIYVITLVGNLGMILLIRLDSRLHTPMYFFLSHLSFLDICYSSTITPKTLLNLLAERKV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  95 INFGGCVAQMFLIHALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQA 174
Cdd:cd15408  81 ISFTGCLTQLYFYAVFATTECYLLAAMAYDRYVAICNPLLYTVIMSQRVCVSLVAGSYLAGFLNSTVHTGFILRLSFCGS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 175 HVIAHSYCEHMSIAKLSCGNIHINAVYGLFVVSFFLLNLVL-IGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVF 253
Cdd:cd15408 161 NVINHFFCDGPPLLALSCSDTSLNEMLLFAFVGFNVLTTTLvILISYTYILATILRMRSAEGRHKAFSTCASHLTAVTLF 240
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 47606353 254 YIPSVFSFLTHRFGHNIPHyiHILVANLYLVIPPFLNPIIYGVRTKQIR 302
Cdd:cd15408 241 YGSLAFMYLRPSSRYSLDL--DKVASVFYTVVIPMLNPLIYSLRNKEVK 287
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
34-303 1.42e-52

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 173.74  E-value: 1.42e-52
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15412   7 FLVIYLITLLGNLGMILLIRLDSRLHTPMYFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYFFIALVIT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15412  87 EYYMLAVMAYDRYMAICNPLLYSVKMSRRVCISLVTFPYIYGFLNGLIQTILTFRLSFCGSNVINHFYCADPPLIKLSCS 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAvYGLFVVSFFLL--NLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNIP 271
Cdd:cd15412 167 DTYVKE-TAMFIVAGFNLssSLLIILISYLFILIAILRIRSAEGRCKAFSTCGSHLTAVTIFYGTLFCMYLRPPSEESVE 245
                       250       260       270
                ....*....|....*....|....*....|..
gi 47606353 272 HyiHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15412 246 Q--SKIVAVFYTFVSPMLNPLIYSLRNKDVKQ 275
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
29-297 1.52e-52

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 173.33  E-value: 1.52e-52
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  29 WISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIH 108
Cdd:cd15914   2 LLFILLLLIYLFIITGNLLIFTVVRLDTHLHTPMYFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFFH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 109 ALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIA 188
Cdd:cd15914  82 SLGITECYLLTAMAYDRYLAICNPLHYPSIMTPKLCTQLAAGCWLCGFLGPVPEIILISTLPFCGPNQIQHIFCDFPPLL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 189 KLSCGNIHINAVYGLFVVSF-FLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLthRFG 267
Cdd:cd15914 162 SLACTDTSLNVLVDFVIHAViILLTFLLILLSYVKIISVVLKIPSAEGRQKAFSTCAAHLTVVLLFFGSVSFMYL--RLS 239
                       250       260       270
                ....*....|....*....|....*....|
gi 47606353 268 HNIPHYIHILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15914 240 KSYSLDYDRAIAVVYAVLTPFFNPIIYSLR 269
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
37-297 3.74e-52

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 172.41  E-value: 3.74e-52
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGMEAE 116
Cdd:cd15431  10 VYLVTLLGNGLIILLIRVDSQLHTPMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYISLFLGITECL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 117 VLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVrPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCGNIH 196
Cdd:cd15431  90 LLAVMAYDRFVAICNPLRYTLIMSWRVCIQLAAGSWV-SAFLLTVIPVLTMPLHFCGPNVINHFFCEVQALLKLACSDTS 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 197 INAVYgLFVVSFF--LLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNipHYI 274
Cdd:cd15431 169 LNEIL-MFATSIFtlLLPFSFILVSYIRIGVAVLRIRSAEGRRKAFSTCGSHLTVVTIFYGTAIFMYLRPQSKSS--SDQ 245
                       250       260
                ....*....|....*....|...
gi 47606353 275 HILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15431 246 DKIISVFYGVVTPMLNPLIYSLR 268
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
34-297 5.71e-52

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 172.08  E-value: 5.71e-52
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15237   7 FLLIYLLTLLGNGLIILLIWLDSRLHTPMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMFFFLALGVT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15237  87 ECVLLAVMAYDRYVAICNPLRYSVIMSRRVCVRLAATSWASGFLNSLVLTSLTLRLPFCGPNHINHFFCEAPAVLKLACA 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVYgLFVVSFF--LLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNIP 271
Cdd:cd15237 167 DTSLNEAV-IFVTSVLvlLIPFSLILASYIRILATILRIQSAEGRKKAFSTCASHLTVVTLFYGTAIFMYMRPHSTHSPD 245
                       250       260
                ....*....|....*....|....*.
gi 47606353 272 HYIHILVanLYLVIPPFLNPIIYGVR 297
Cdd:cd15237 246 QDKMISV--FYTIVTPMLNPLIYSLR 269
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
32-303 8.28e-52

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 171.67  E-value: 8.28e-52
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  32 LPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALT 111
Cdd:cd15417   5 VLFLGIYLVTLLWNLGLIILIRMDSHLHTPMYFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFVFSGMG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 112 GMEAEVLMAMAFDRYVAICVPLHYTTIltshvlMGISICV--VVRPTL--FICPMI--YLIYRLPFCQAHVIAHSYCEHM 185
Cdd:cd15417  85 LTECFLLAAMAYDRYVAICNPLLYSVI------MSPRLCVqlVAGAYLggFLNSLIqtVSMFQLSFCGPNVIDHFFCDIP 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 186 SIAKLSCGNIHINAVYGLFVVSFF-LLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTH 264
Cdd:cd15417 159 PLLSLSCSDTFISQVVLFLVAVLFgVFSVLVVLISYGYIISTILKIRSAKGRSKAFNTCASHLTAVTLFYGTGLFVYLRP 238
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47606353 265 RFGHNIPHyiHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15417 239 SSSHSQDQ--DKVASVFYTVVIPMLNPLIYSLRNKEIKD 275
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
32-303 2.18e-51

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 170.67  E-value: 2.18e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  32 LPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALT 111
Cdd:cd15409   5 LVFLAIYLITLVGNLGLIALIWKDSHLHTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFFGFSA 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 112 GMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLS 191
Cdd:cd15409  85 TTECFLLAAMAYDRYVAICNPLLYPVVMSNRLCVQLITASYIGGFLHSMIHVGLTFRLSFCGSNEINHFFCDIPPLLKIS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 192 CGNIHINAVYgLFVVSFFL--LNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHN 269
Cdd:cd15409 165 CTDPSINELV-LFIFSGSIqvFTILTVLISYSYILFTILKMKSAEGRRKAFSTCGSHLLSVSLFYGSLFFMYVRPSSLYA 243
                       250       260       270
                ....*....|....*....|....*....|....
gi 47606353 270 IPHyiHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15409 244 LDQ--DMMDSLFYTIVIPLLNPFIYSLRNKEVID 275
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
28-303 2.43e-51

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 170.66  E-value: 2.43e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  28 AWISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLI 107
Cdd:cd15429   1 LGLFVLFLVMYLLTLLGNFLIILLIRLDPRLHTPMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFIS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 108 HALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSI 187
Cdd:cd15429  81 LALGGTEFILLAVMAYDRYVAVCHPLRYTVIMSGGLCIQLAAASWTSGFLNSLVQTAFTFRLPFCGHNTINHFSCELLAV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 188 AKLSCGNIHINAVygLFVVSFFLLNLV---LIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTH 264
Cdd:cd15429 161 VRLACVDTSLNEV--AILVSSVVVLLTpcfLVLLSYIHIISAILRIRSSEGRHKAFSTCASHLTVVSLCYGTAIFTYMRP 238
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47606353 265 RFGHNipHYIHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15429 239 RSGSS--ALQEKMISLFYAVVTPMLNPLIYSLRNKEVKG 275
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
38-303 3.26e-51

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 170.25  E-value: 3.26e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  38 YLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGMEAEV 117
Cdd:cd15434  11 YLLTLVGNTTIILVSCLDSRLHTPMYFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLFIALGLGGTECVL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 118 LMAMAFDRYVAICVPLHYTTILTSHV---LMGISICVVVRPTLFICPmiyLIYRLPFCQAHVIAHSYCEHMSIAKLSCGN 194
Cdd:cd15434  91 LAVMAYDRYAAVCQPLHYTVVMHPRLcwkLVAMSWLIGFGNSLVLSP---LTLSLPRCGHHRVDHFFCEMPALIKLACVD 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 195 IH-INAVYGLFVVSFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLthRFGHNIPHY 273
Cdd:cd15434 168 TTaYEATIFALGVFILLFPLSLILVSYGYIARAVLKIKSAAGRKKAFGTCGSHLTVVSLFYGTIIYMYL--QPKNSVSQD 245
                       250       260       270
                ....*....|....*....|....*....|
gi 47606353 274 IHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15434 246 QGKFLTLFYTIVTPSLNPLIYTLRNKDVKG 275
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
34-303 3.88e-51

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 170.07  E-value: 3.88e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15234   7 FLSMYLVTVLGNLLIILAVSSDSHLHTPMYFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCFFLLFGGL 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHvlmgisICVV-VRPTLFICPMIYLIY-----RLPFCQAHVIAHSYCEHMSI 187
Cdd:cd15234  87 DNFLLAVMAYDRYVAICHPLHYTVIMNPC------LCGLlVLLSLLISILDSLLHslmvlQLSFCTDVEIPHFFCELAQV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 188 AKLSCGNIHINAVYgLFVVSFFLLNLVLIGI--SYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFY-------IPSV 258
Cdd:cd15234 161 LKLACSDTLINNIL-IYLATVIFGGIPLSGIifSYYKIVSSILRIPSSGGKYKAFSTCGSHLSVVSLFYgtglgvyISSA 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 47606353 259 FSFLTHRfghniphyihILVANL-YLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15234 240 VTHSSRK----------TAVASVmYTVVTPMLNPFIYSLRNKDMKG 275
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
34-303 9.70e-51

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 169.14  E-value: 9.70e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15407   7 FTLIYLITLVGNLGMILLILLDSRLHTPMYFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFFVVFATV 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15407  87 ENFLLASMAYDRHAAVCKPLHYTTTMTTKVCACLTIGCYVCGFLNASIHTGNTFRLSFCKSNVINHFFCDIPPVLALSCS 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVYGLFVVSF-FLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNIPh 272
Cdd:cd15407 167 DIHISEIVLFFLASFnVFFALLVILISYLFIFITILRMRSAEGHQKAFSTCASHLTAVSIFYGTVIFMYLQPSSSHSMD- 245
                       250       260       270
                ....*....|....*....|....*....|.
gi 47606353 273 yIHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15407 246 -TDKMASVFYTMVIPMLNPLVYSLRNKEVKS 275
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
37-301 2.08e-50

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 168.38  E-value: 2.08e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGMEAE 116
Cdd:cd15424  10 IYLLTILGNLVIIILVQTDSRLHTPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIALSLGSTECL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 117 VLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCGNIH 196
Cdd:cd15424  90 LLGAMAYDRYLAICHPLLYAAAMGRWRQLQLALSCWAIGFLLSVINVGCTLRHPFCGPNHINHFFCELPVVLKLACADTH 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 197 IN--AVYGLFVVsFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNIPHYI 274
Cdd:cd15424 170 ITeaIVFGAGVL-ILLVPLSVILTSYGLILASVLQMQSAAGRHKAFSTCASHLAVVTLFYGTVISMYMRPRSGSTPDRDK 248
                       250       260
                ....*....|....*....|....*..
gi 47606353 275 HILVanLYLVIPPFLNPIIYGVRTKQI 301
Cdd:cd15424 249 QIAV--FYIVITPLLNPIIYTLRNKDV 273
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
34-297 5.87e-50

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 166.61  E-value: 5.87e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15226   7 FSLFYVATVLGNLLIVVTVTSDPHLHSPMYFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFLHFFGGS 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15226  87 EMVLLIAMAFDRYVAICKPLHYLTIMSPRMCILLVVASWIIGFIHSLSQLAFVVNLPFCGPNVVDSFFCDLPLVIKLACT 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIH-----INAVYGLF-VVSFFLLNlvligISYGYILHAVfRLPSHDARLKALSTCGSHVAVLCVFYIPSVF-------S 260
Cdd:cd15226 167 DTYvlelmVVANSGLIsLVCFLLLL-----ISYIVILVTV-RKHSSGGSSKALSTCSAHITVVVLFFGPCIFiyvwpfsT 240
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47606353 261 FLTHRFghniphyihilVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15226 241 FPVDKF-----------LAVFYTVITPLLNPIIYTLR 266
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
15-303 6.63e-50

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 167.45  E-value: 6.63e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  15 FFLIGIPGLEEIHAWISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHE 94
Cdd:cd15410   1 FILLGFTDYPELQVPLFLVFLAIYGITLLGNLGMIVLIKIDPKLHTPMYFFLSHLSFVDFCYSSVIAPKMLVNFLAEDKA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  95 INFGGCVAQMFLIHALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLmgISICVVVRPTLFICPMI--YLIYRLPFC 172
Cdd:cd15410  81 ISYSGCMLQFFFFCTFVVTESFLLAVMAYDRYVAICNPLLYTVIMSRKLC--VLLVAGSYLWGIVCSLIhtCGLLRLSFC 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 173 QAHVIAHSYCEHMSIAKLSCGNIHINAVYGLFVVSFF-LLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLC 251
Cdd:cd15410 159 GSNVINHFFCDLPPLLSLSCSDTYLNELLLFIFGSLNeASTLLIILTSYVFIIVTILRIRSAEGRQKAFSTCASHLTAIT 238
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 47606353 252 VFYIPSVFSFLthrfghnIPHYIHILVAN-----LYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15410 239 IFHGTILFMYC-------RPSSSYSLDTDkvasvFYTVVIPMLNPLIYSLRNKDVKD 288
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
34-303 2.55e-49

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 165.62  E-value: 2.55e-49
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15406  16 FLGIYVVTVVGNLGMILLITLSSQLHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISYPECMTQLFFFCVFAIA 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMgiSICVVVRPTLFICPMIYLIY--RLPFCQAHVIAHSYCEHMSIAKLS 191
Cdd:cd15406  96 ECYMLTAMAYDRYVAICNPLLYNVTMSPRVCS--LLVAGVYIMGLIGATVHTSCmlRLSFCGDNVINHYFCDILPLLKLS 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 192 CGNIHINAVYGLFVVSFFLLNLVL-IGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNI 270
Cdd:cd15406 174 CSSTYINELLLFIVGGFNVLATTLaILISYAFILSSILRIRSAEGRSKAFSTCSSHLAAVGVFYGSIIFMYLKPSSSSSM 253
                       250       260       270
                ....*....|....*....|....*....|....
gi 47606353 271 phyIHILVANL-YLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15406 254 ---TQEKVSSVfYTTVIPMLNPLIYSLRNKDVKN 284
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
15-303 4.38e-49

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 165.30  E-value: 4.38e-49
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  15 FFLIGIPGLEEIHAWISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHE 94
Cdd:cd15945   1 FILLGFTDYLSLKVTLFLVFLLVYLLTLVGNVGMIILIRMDSQLHTPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRKS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  95 INFGGCVAQMFLIHALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHV----LMGISICVVVRPTLFICpmiyLIYRLP 170
Cdd:cd15945  81 IPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRRVcyllLVGAYLSGMATSLVHTT----LTFRLS 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 171 FCQAHVIAHSYCEHMSIAKLSCGNIHINAVYgLFVVSFF--LLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVA 248
Cdd:cd15945 157 FCGSNTINHFFCDIPPLLALSCSDTQINELL-LFALCGFiqTSTFLAIIISYCYIIITVLKIRSAEGRFKAFSTCASHLT 235
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 47606353 249 VLCVFYIPSVFSFLTHRFGHNIPHyiHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15945 236 AVGLFYGTLLFMYLRPSSSYSLDT--DKMTSVFYTLVIPMLNPLIYSLRNKDVKE 288
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
34-303 1.07e-48

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 163.80  E-value: 1.07e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15432   7 FLIFYILTLLGNLAIILVSRLDPQLHTPMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFIFLGLGST 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15432  87 ECVLLAVMAFDRFAAICQPLHYSVIMHQRLCQQLAAGAWISGFANSLVQSTLTLKMPRCGRRRVDHFFCEVPALLKLSCV 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVyGLFVVS--FFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLthRFGHNIP 271
Cdd:cd15432 167 DTTANEA-ELFVISvlLLLIPLGLILISYIFIVRAVLRIRSAEGRRKAFNTCGSHLLVVSLFYGTAISMYL--QPPSNSS 243
                       250       260       270
                ....*....|....*....|....*....|..
gi 47606353 272 HYIHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15432 244 HDRGKMVALFYGIITPMLNPLIYTLRNKDVKE 275
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
32-302 1.40e-48

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 163.39  E-value: 1.40e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  32 LPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRML-GIFWFDAHEINFGGCVAQMFLIHAL 110
Cdd:cd15916   5 LIFLIIYLLTVLGNLLILLTVWVDSHLHRPMYIFLGHLSFLDMWLSTVTVPKMLaGFLEPGGKVISFGGCVAQLYFFHFL 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 111 TGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKL 190
Cdd:cd15916  85 GSTECFLYTLMAYDRYLAICHPLHYPTIMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPNRIDYFFCDIPPLLKL 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 191 SCGNIHINAVYGLFVVSFFLLN-LVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLThrfgHN 269
Cdd:cd15916 165 ACADTTINELVIFASIGVVALGcFILILLSYGNIVRAILRIRTAEGRRRAFSTCASHLIVVLCFYVPCVFIYLR----PG 240
                       250       260       270
                ....*....|....*....|....*....|...
gi 47606353 270 IPHYIHILVANLYLVIPPFLNPIIYGVRTKQIR 302
Cdd:cd15916 241 SKEALDGVIAVFYTVVTPLLNPLIYTLRNKEVK 273
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
34-303 1.54e-48

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 163.31  E-value: 1.54e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15416   7 FLVIYSVTLLGNLSIILLIRISSQLHTPMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSAATFGTV 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15416  87 ECFLLAAMAYDRYVAICNPLLYSTIMSQKVCVLLVAASYLGGCLNALVFTTCVFSLSFCGPNEINHFFCDFPPLLKLSCS 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVYGLFV-VSFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNIPH 272
Cdd:cd15416 167 DIRLAKILPSISsGIIILVTVLTIIISYLYILIAILRIRSTEGRHKAFSTCASHLTAVTLFYGTITFIYVMPNSSYSMDQ 246
                       250       260       270
                ....*....|....*....|....*....|.
gi 47606353 273 yiHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15416 247 --NKVVSVFYMVVIPMLNPLIYSLRNKEVKG 275
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
34-297 1.94e-48

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 162.86  E-value: 1.94e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15915   7 FLLLYLASLLGNGAILAVVIAEPRLHSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFFHFLGSS 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHV-LMGISICVVvrpTLFICPMIYLIY--RLPFCQAHVIAHSYCEHMSIAKL 190
Cdd:cd15915  87 EAMLLAVMAYDRYVAICNPLRYTVIMNPQVcLLLAVACWV---TGFFHALMHTVMtsRLPFCGPNKINHFFCDIKPLLKL 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 191 SCGNIHIN-----AVYGLFVVSFFLLNLvligISYGYIL-HAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTH 264
Cdd:cd15915 164 ACGDTSLNlwllnIVTGSIALGTFILTL----LSYIYIIsFLLLKVRSKEGRHKAFSTCASHLTVVLLLYGPALFTYIRP 239
                       250       260       270
                ....*....|....*....|....*....|...
gi 47606353 265 RFGHNIPHyiHILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15915 240 SSGDSLEQ--DRIVALLYTVVTPVLNPLIYTLR 270
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
32-302 4.06e-48

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 162.22  E-value: 4.06e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  32 LPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALT 111
Cdd:cd15942   5 LFFLVVYLLTLSGNSLIILVVISDLQLHKPMYWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQLFFFHFLG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 112 GMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLS 191
Cdd:cd15942  85 CAECFLYTVMAYDRFLAICKPLHYSTIMNHRACLCLSLGTWLGGCLHSTFQTSLTFRLPYGQKNEVDYIFCDIPAMLKLA 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 192 CGNIHINAVYGLFVVSFFLLN-LVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLthRFGHNI 270
Cdd:cd15942 165 CADTAFNELVTFIDIGLVAMTcFLLILMSYVYIVSAILKIPSAEGQRRAFSTCTAHLTVVVIYYVPLTFIYL--RPGSQD 242
                       250       260       270
                ....*....|....*....|....*....|..
gi 47606353 271 PhyIHILVANLYLVIPPFLNPIIYGVRTKQIR 302
Cdd:cd15942 243 P--LDGVVAVFYTTVTPLLNPVIYTLRNKEMK 272
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
34-297 1.45e-47

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 160.53  E-value: 1.45e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15224   7 FLIAYVLTLLENLLIILTIWLNSQLHKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFLSLACT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15224  87 ECVLLAVMAYDRYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNVINHFFCDISPLLNLSCT 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVYGLFVVSFFLL-NLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSF----LTHRFGH 268
Cdd:cd15224 167 DMSLAELVDFILALIILLvPLLVTVASYICIISTVLRIPSATGRQKAFSTCASHLTVVIIFYSATLFMYarpkAISSFDS 246
                       250       260
                ....*....|....*....|....*....
gi 47606353 269 NiphyihILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15224 247 N------KLVSVLYTVVTPLLNPIIYCLR 269
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
30-312 2.24e-47

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 160.67  E-value: 2.24e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  30 ISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHA 109
Cdd:cd15414   3 LFLLFLLVYLITLLGNLGMIILIQVDSRLHTPMYFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFFGL 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 110 LTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVrpTLFICPMIY--LIYRLPFCQAHVIAHSYCEHMSI 187
Cdd:cd15414  83 FVAAECFLLASMAYDRYVAICNPLLYTVIMSQRVCVQLVVGPYV--VGLLNTTTHttAAFFLPFCGPNVINHFFCDIPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 188 AKLSCGNIHINAVYgLFVVSFFLLNL--VLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLthR 265
Cdd:cd15414 161 LSLSCADTQINKWV-LFIMAGALGVLsgLIILVSYIYILIAILRIRSAEGRRKAFSTCSSHLTAVSILYGTLFFIYV--R 237
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 47606353 266 FGHNIPHYIHILVANLYLVIPPFLNPIIYGVRTKQIRERVLHIFTKR 312
Cdd:cd15414 238 PSSSSSLDLDKVVSVFYTAVIPMLNPLIYSLRNKEVKDALRRTIRRK 284
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
34-302 3.19e-47

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 159.96  E-value: 3.19e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15233   7 FLLAYIVTIGGNLSILAAILLEPKLHTPMYFFLGNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLFFFHLLAGA 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMG-ISICVVVRPTLFICPMIyLIYRLPFCQAHVIAHSYCEHMSIAKLSC 192
Cdd:cd15233  87 DCFLLTAMAYDRYLAICQPLTYSVRMSWRVQTAlVGISCACAFTNALTHTV-AMSTLKFCGPNVINHFFCDLPPLFQLSC 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 193 GNIHINAVYgLFVVSFF--LLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLthRFGHNI 270
Cdd:cd15233 166 SSTHLNELL-LFVFAFFmaLAPCVLIVVSYAHVVAAVLRIRSAEGRRKAFSTCGSHLTVVCIFYGTGVFSYM--RLGSVY 242
                       250       260       270
                ....*....|....*....|....*....|..
gi 47606353 271 PHYIHILVANLYLVIPPFLNPIIYGVRTKQIR 302
Cdd:cd15233 243 SSDKDKVIGILNTVLSPMLNPLIYSLRNKDVK 274
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
37-297 3.94e-47

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 159.46  E-value: 3.94e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGMEAE 116
Cdd:cd15430  10 MYLVILLGNGVLIIITILDSHLHTPMYFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYLSLAMGSTECV 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 117 VLMAMAFDRYVAICVPLHYttiltsHVLMGISICVVVRPTLFICPMI------YLIYRLPFCQAHVIAHSYCEHMSIAKL 190
Cdd:cd15430  90 LLAVMAYDRYVAICNPLRY------PIIMNKRLCVQMAAGSWVTGFLnslvetVLAMQLPFCGNNVINHFTCEILAVLKL 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 191 SCGNIHINAVYGLFV-VSFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHN 269
Cdd:cd15430 164 ACVDISLNEIIMLVGnIIFLVIPLLLICISYIFILSTILRINSAEGRKKAFSTCSAHLTVVIIFYGTILFMYMKPKSKNA 243
                       250       260
                ....*....|....*....|....*...
gi 47606353 270 ipHYIHILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15430 244 --QISDKLITLFYGVVTPMLNPIIYSLR 269
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
34-303 3.52e-45

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 154.88  E-value: 3.52e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15415   7 FLLIYFITLLGNLGMIVLIRINPQLHTPMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFFFAVFVTT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVlmgiSICVVVRPTL--FICPMIYLI--YRLPFCQAHVIAHSYCEHMSIAK 189
Cdd:cd15415  87 EGFLLAVMAYDRYVAICNPLLYTVAMTKRV----CVQLVAGSYLggLINSLTHTIglLKLSFCGPNVINHYFCDIPPLLK 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 190 LSCGNIHINAVYGL-FVVSFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGH 268
Cdd:cd15415 163 LSCSDTHINELLLLtFSGVIAMSTLLTIIISYIFILFAILRIRSAEGRRKAFSTCASHLTAVTLFYGSVSFSYIQPSSQY 242
                       250       260       270
                ....*....|....*....|....*....|....*
gi 47606353 269 NIPHyiHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15415 243 SLEQ--EKVSAVFYTLVIPMLNPLIYSLRNKDVKD 275
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
34-297 1.31e-44

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 152.87  E-value: 1.31e-44
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15936   7 FLLVYLTTWLGNLLIIITVISDPHLHTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFFHFTGGA 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15936  87 EVFLLSVMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCGPNVLDNFYCDVPQVIKLACT 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVY-----GLFVVSFFLLNLvligISYGYILhAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFltHRFGH 268
Cdd:cd15936 167 DTFLLELLmvsnsGLVTLLIFFILL----ISYTVIL-VKIRTHVTEGKRKALSTCASQITVVTLIFVPCIYIY--ARPFQ 239
                       250       260
                ....*....|....*....|....*....
gi 47606353 269 NIPhyIHILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15936 240 TFP--MDKAVSVLYTVITPMLNPMIYTLR 266
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
15-303 3.56e-44

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 152.63  E-value: 3.56e-44
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  15 FFLIGIPGLEEIHAWISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHE 94
Cdd:cd15944   1 FILLGFTQDPQMQIILFVVFLIIYLVNVVGNLGMIILITTDSQLHTPMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHKV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  95 INFGGCVAQMFLIHALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQA 174
Cdd:cd15944  81 ISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSYLAGLVNLVIHTTATFSLSFCGS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 175 HVIAHSYCEHMSIAKLSCGNIHINAVYGLFVVSFFLL-NLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVF 253
Cdd:cd15944 161 NIINHFFCDVPPLLALSCSDTHINEILLYVFCGFVEMsSLSIILISYLFILVAILRMRSAEGRRKAFSTCASHFTGVTLF 240
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 47606353 254 YIPSVFSFLThrfghniPHYIHIL-----VANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15944 241 YGTVIFMYLR-------PTSVYSLdqdkwASVFYTVVIPMLNPLIYSLRNKDVKE 288
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
34-297 4.43e-44

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 151.44  E-value: 4.43e-44
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15940   7 FLVLYLLTLSGNILIMITIVMDPRLHTPMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFLHLFACT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15940  87 EIFLLTIMAYDRYVAICNPLHYPTVMNHKVCLWLVAALWLGGTVHSLAQTFLTIRLPYCGPNEIDSFFCDVPPVIKLACT 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVY-----GLFVVSFFLLNLVligiSYGYILHAVfRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLThrfgH 268
Cdd:cd15940 167 DTYLIDILivsnsGLISLVCFVALLG----SYIVILVSL-RKRSTEGRRKALSTCASHLTVVTLFFGPCIFIYTR----P 237
                       250       260
                ....*....|....*....|....*....
gi 47606353 269 NIPHYIHILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15940 238 STSFSEDKVVSVFYTVVTPLLNPIIYTLR 266
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
34-297 7.62e-44

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 151.09  E-value: 7.62e-44
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15946   7 FLLIYLSILLGNGLIITLICLDSRLHTPMYFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIFLALGIT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTshvlMGISICVVVRPTL--FICPMIYLIY--RLPFCQAHVIAHSYCEHMSIAK 189
Cdd:cd15946  87 ECTLFSVMAYDRYVAICHPLRYKVIMS----WGLCILMVAGSWVcgVFSSLLHTFFtmRLPYCGPNEINHYFCEVPAVLK 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 190 LSCGNIHINAVYGlFVVSFFLL--NLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLthRFG 267
Cdd:cd15946 163 LACADTSLNEMVD-FVLGVIVLvvPLSLILASYVNIFKAILKIRSTQGRCKAFSTCASHITVVTMFYGPAMFMYM--RPG 239
                       250       260       270
                ....*....|....*....|....*....|
gi 47606353 268 HNIPHYIHILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15946 240 SNYSPERDKKISLFYNVFTALLNPVIYSLR 269
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
34-303 1.75e-43

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 150.17  E-value: 1.75e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15413   7 FLVIYLTTVMGNLGMIILTRLDSRLQTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAFFLTFIIS 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15413  87 ELFLLSAMAYDRYVAICNPLLYTVIMSQRVCIVLVAIPYLYSFFVALFHTIKTFRLSFCGSNVINHFYCDDLPLLALSCS 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVYGLFVVSF-FLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNIPh 272
Cdd:cd15413 167 DTHEKELIILIFAGFnLISSLLIVLVSYLFILSAILRIRSAEGRQKAFSTCGSHLTVVTIFYGTLIFMYLQPKSSHSLD- 245
                       250       260       270
                ....*....|....*....|....*....|.
gi 47606353 273 yIHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15413 246 -TDKMASVFYTLVIPMLNPLIYSLRNKEVKD 275
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
34-302 4.68e-43

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 149.12  E-value: 4.68e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15228   7 FLAFYLCTLLGNLLILSAILSDPRLHTPMYFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFYHFLGST 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15228  87 ECLLYTVMAYDRYVAICHPLRYLLIMNRRVCALLAAGTWITSSFHATILTSLTFTLPYCGSNVVDYFFCDIFPVLKLACA 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVYGLFVVSFF-LLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNIPH 272
Cdd:cd15228 167 DTSIAETVSFTNVGLVpLTCFLLILASYVRIVISILKMRSAEGRRKAFSTCSSHLTVVTLFFGPCALIYTQPTPSPVLVT 246
                       250       260       270
                ....*....|....*....|....*....|
gi 47606353 273 YIHILVAnlylVIPPFLNPIIYGVRTKQIR 302
Cdd:cd15228 247 PVQIFNN----VVTPMLNPLIYTLRNKEVK 272
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
34-297 3.74e-42

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 146.69  E-value: 3.74e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15913   7 FSVIYILTLLGNGAIICAVWWDRRLHTPMYILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFFFSLGTT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISI-CVVVRPTLFICPmIYLIYRLPFCQAHVIAHSYCEHMSIAKLSC 192
Cdd:cd15913  87 ECFFLSVMAFDRYLAICRPLHYPTIMTGQLCGKLVAfCWVCGFLWFLIP-VVLISQLPFCGPNIIDHFLCDPGPLLALSC 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 193 GNIHINA-VYGLFVVSFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHniP 271
Cdd:cd15913 166 VPAPGTElICYTLSSLIIFGTFLFILGSYTLVLRAVLRVPSAAGRHKAFSTCGSHLAVVSLFYGSVMVMYVSPGSGN--S 243
                       250       260
                ....*....|....*....|....*.
gi 47606353 272 HYIHILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15913 244 TGMQKIVTLFYSVVTPLLNPLIYSLR 269
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
38-302 6.78e-42

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 146.09  E-value: 6.78e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  38 YLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGMEAEV 117
Cdd:cd15433  11 YLLTLVGNTIIILLSVRDLRLHTPMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFISLALGSAECVL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 118 LMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCGNIHI 197
Cdd:cd15433  91 LAVMAFDRYAAVCRPLHYAALMSPRLCQTLASISWLSGFVNSVAQTGLLAERPLCGHRLLDHFFCEMPVFLKLACGDDET 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 198 NAVYgLFV--VSFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLthRFGHNIPHYIH 275
Cdd:cd15433 171 TEVQ-MFVarVVILLLPAALILGSYGHVAHAVLRIKSSAGRRRAFGTCGSHLMVVFLFYGSAIYTYL--QPIHRYSQAHG 247
                       250       260
                ....*....|....*....|....*..
gi 47606353 276 ILVANLYLVIPPFLNPIIYGVRTKQIR 302
Cdd:cd15433 248 KFVSLFYTVMTPALNPLIYTLRNKDVK 274
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
34-303 1.13e-41

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 145.69  E-value: 1.13e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15418   8 FLLSYILTLVGNLTLIALICLDSRLHTPMYFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFFSAGLAYS 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15418  88 ECFLLAAMAYDRYVAICNPLLYSSAMSKKLCMGLVAASYLGGFANAIIHTSNTFRLHFCGDNIIDHFFCDLPPLVKLACD 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVYGLFVVSFFLLN-LVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHnIPH 272
Cdd:cd15418 168 DTRVYELILYFILGFNVIApTALILASYTFILAAILRIHSASGRHKAFSTCSAHLTSVTLYYGSILFIYSRPSSSH-TPD 246
                       250       260       270
                ....*....|....*....|....*....|.
gi 47606353 273 YIHIlVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15418 247 RDKV-VALFYTVVNPLLNPLIYSLRNKDVKE 276
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
34-302 5.69e-41

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 143.77  E-value: 5.69e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15428   7 FLIIYLMTVLGNLLLVLLVIVDSHLHTPMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFFLSFGIT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15428  87 ECALLSVMSYDRYVAICLPLRYSLIMTWKVCISLATGSWVGGLLVSAVDTAFTLNLSFGGHNKINHFLCEMPALLKLAST 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIH-INAVYGLFVVSFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRfGHNIPH 272
Cdd:cd15428 167 DTHqAEMAMFIMCVFTLVLPVLLILASYTRIIYTVFGMQSLTGRLKAFSTCSSHLMVVSLFYGSVLSTYMRPK-SSTSKE 245
                       250       260       270
                ....*....|....*....|....*....|
gi 47606353 273 YIHIlVANLYLVIPPFLNPIIYGVRTKQIR 302
Cdd:cd15428 246 YDKM-ISVFYIIVTPMLNPLIYSLRNKEVK 274
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
34-302 8.26e-41

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 143.37  E-value: 8.26e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15236   7 FLAMYLTTVLGNLLIILLIRLDSHLHTPMYFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFFIFFGCL 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15236  87 DSFLLAVMAYDRYVAICHPLHYTAIMRPELCVLLVAGSWVLTCFHALLHTLLLARLSFCADNVIPHFFCDLVALLKLSCS 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVYgLFVVSFFLLNLVLIGI--SYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLthRFGHNIP 271
Cdd:cd15236 167 STSLNELV-IFTEGGLLFVLPLLLIlgSYIRIAATILKVPSTKGICKAFSTCGSHLSVVFLYYGTIIGVYF--FPSSNNS 243
                       250       260       270
                ....*....|....*....|....*....|.
gi 47606353 272 HYIHILVANLYLVIPPFLNPIIYGVRTKQIR 302
Cdd:cd15236 244 SDKDIVASVMYTVVTPMLNPFIYSLRNRDIK 274
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
32-302 1.54e-40

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 142.68  E-value: 1.54e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  32 LPFCCIYLVALVGNTMILVVIKTGRSLRE-PMFYFLAILSSVDLALSTTSVPRML-GIFWFDAHEINFGGCVAQMFLIHA 109
Cdd:cd15941   5 LLFLLIYLLTVLGNLLILLTIGSDPHLHGlPMYHFLGHLSFLDACLSSVTVPKVLaGLLTLSGRTISFEGCVVQLYAFHF 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 110 LTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAK 189
Cdd:cd15941  85 LASTECFLYTVMAYDRYLAICHPLHYPTAMNRRMCAGLAGGTWATGATHAAIHTSLTFRLPYCGPCQIAYFFCDIPPVLK 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 190 LSCGNIHINAVYGLFVVSFFLLN-LVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGH 268
Cdd:cd15941 165 LACADTTINELVILANIGIVAAGcFLLIVISYIYIVAAVLRIRTAEGRQRAFSTCSAHLTGVLLYYVPSVFIYLQPSSSQ 244
                       250       260       270
                ....*....|....*....|....*....|....
gi 47606353 269 NIPHyihiLVANLYLVIPPFLNPIIYGVRTKQIR 302
Cdd:cd15941 245 AGAG----APAVFYTIVTPMLNPFIYTLRNKEVK 274
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
30-297 1.02e-39

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 140.28  E-value: 1.02e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  30 ISLPFCCIYLVALVGNTMILVVIKTGRSLRE-PMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIH 108
Cdd:cd15935   3 LFVLVLACYAAILLGNLLIVVTVHADPHLLQsPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFLH 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 109 ALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIA 188
Cdd:cd15935  83 FLGGSEMLLLTLMAYDRYVAICHPLRYLAVMNRQLCIKLLAACWAGGFLHSATQAALVLRLPFCGPNELDNFYCDVPQVI 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 189 KLSCGNIHINAVygLFVVSFFLLNLV---LIGISYGYILhAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHR 265
Cdd:cd15935 163 KLACMDTYVVEV--LMVANSGLLSLVcflVLLVSYGIIL-TTLRGRFREGGGKALSTCSSHLTVVSLIFVPCIFVYLRPF 239
                       250       260       270
                ....*....|....*....|....*....|..
gi 47606353 266 FGHNIPHYIHIlvanLYLVIPPFLNPIIYGVR 297
Cdd:cd15935 240 SSSSVDKVASV----FYTLITPALNPLIYTLR 267
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
34-302 2.12e-39

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 139.47  E-value: 2.12e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15405   7 FLGIYVVTVVGNLGLITLICLNSHLHTPMYFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFFCFFVIS 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPtlFICPMIYL--IYRLPFCQAHVIAHSYCEHMSIAKLS 191
Cdd:cd15405  87 ECYVLTAMAYDRYVAICNPLLYTVTMSPQVCSLLMLGSYVMG--FAGAMAHTgcMLRLTFCDSNIINHYMCDILPLLQLS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 192 CGNIHINAVYGLFVVSF-FLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNI 270
Cdd:cd15405 165 CTSTYVNELVVFVVVGInIIVPSVTIFISYALILSNILHISSTEGRSKAFSTCSSHIIAVSLFFGSGAFMYLKPSSVGSV 244
                       250       260       270
                ....*....|....*....|....*....|..
gi 47606353 271 PHYIHILVanLYLVIPPFLNPIIYGVRTKQIR 302
Cdd:cd15405 245 NQGKVSSV--FYTNVVPMLNPLIYSLRNKDVK 274
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
34-297 3.62e-36

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 130.76  E-value: 3.62e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15938   7 FLLAYTMVLVGNLLIMVTVRSDPKLSSPMYFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFFLHFVGAA 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15938  87 EMFLLTVMAYDRYVAICKPLHYTTIMSRRLCWVLVAASWAGGFLHSIVQTLLTIQLPFCGPNQVNNFFCDVPPVIKLACT 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVY-----GLFVVSFFllnLVLIGiSYGYILhavFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLthRFGH 268
Cdd:cd15938 167 DTCVTELLmvsnsGLISTVCF---VVLVT-SYTTIL---VTIRSTEGRRKALSTCASHLMVVTLFFGPCIFIYA--RPFS 237
                       250       260
                ....*....|....*....|....*....
gi 47606353 269 NIPHYIHILVanLYLVIPPFLNPIIYGVR 297
Cdd:cd15938 238 TFPVDKHVSV--LYNVITPMLNPLIYTLR 264
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
34-297 2.40e-35

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 128.70  E-value: 2.40e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15937   7 FLLFYLIILPGNILIILTIQGDPQLGSPMYFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFLHFLGAA 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15937  87 EMFLLVAMAYDRYVAICKPLHYTTVVNRRVCCVLVGASWAGGFIHSIIQVALIIRLPFCGPNVLDNFFCDITQVIKLACT 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVY-----GLFVVSFFLLNLvligISYGYILhAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFlTHRFgH 268
Cdd:cd15937 167 NTYTVELLmfsnsGLVILLCFLLLL----ISYAFLL-AKLRTHSSKGKSKAASTCITHIIIVFVMFGPAIYIY-ARPF-R 239
                       250       260
                ....*....|....*....|....*....
gi 47606353 269 NIPhyIHILVANLYLVIPPFLNPIIYGVR 297
Cdd:cd15937 240 SFP--MDKVVAVFHTVIFPLLNPMIYTLR 266
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
34-297 2.43e-20

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 88.50  E-value: 2.43e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd00637   5 YILIFVVGLVGNLLVILVILRNRRLRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQSVSLLA 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMsiaklscg 193
Cdd:cd00637  85 SILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWGVYDYGGYCCCCLCWPDLT-------- 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 niHINAVYGLFVVSFFLLNLVLIGISYGYILHAVFR--------------LPSHDARLKALSTCGSHVAVLCVFYIPSVF 259
Cdd:cd00637 157 --LSKAYTIFLFVLLFLLPLLVIIVCYVRIFRKLRRhrrrirssssnssrRRRRRRERKVTKTLLIVVVVFLLCWLPYFI 234
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 47606353 260 SFLTHRFGHNIPHYIHIL--VANLYLVIPPFLNPIIYGVR 297
Cdd:cd00637 235 LLLLDVFGPDPSPLPRILyfLALLLAYLNSAINPIIYAFF 274
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
44-294 5.90e-18

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 81.57  E-value: 5.90e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353    44 GNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPrmlgiFWFDAHEINF------GGCVAQMFLIHALTGMEAEV 117
Cdd:pfam00001   1 GNLLVILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLP-----FWLVYYLNHGdwpfgsALCKIVGALFVVNGYASILL 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353   118 LMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAhsyCEHMSIAKLSCGNIHi 197
Cdd:pfam00001  76 LTAISIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVPEGNVTV---CFIDFPEDLSKPVSY- 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353   198 naVYGLFVVSFFLLnLVLIGISYGYILHAVF-------RLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNI 270
Cdd:pfam00001 152 --TLLISVLGFLLP-LLVILVCYTLIIRTLRksaskqkSSERTQRRRKALKTLAVVVVVFILCWLPYHIVNLLDSLALDC 228
                         250       260
                  ....*....|....*....|....*...
gi 47606353   271 PHYIHI----LVANLYLVIPPFLNPIIY 294
Cdd:pfam00001 229 ELSRLLdkalSVTLWLAYVNSCLNPIIY 256
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
29-303 3.71e-08

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 53.34  E-value: 3.71e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  29 WISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVP-----RMLGIFWFDAHE------INF 97
Cdd:cd14967   1 LLAVFLSLIILVTVFGNLLVILAVYRNRRLRTVTNYFIVSLAVADLLVALLVMPfsavyTLLGYWPFGPVLcrfwiaLDV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  98 GGCVAQMFlihaltgmeaeVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIyliyrlpfcqahVI 177
Cdd:cd14967  81 LCCTASIL-----------NLCAISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISLPPL------------VG 137
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 178 AHSYCEHMSIAKLSCGNIHINAVYGLFVVSFFLLNLVLIgISYGYILHAVFRlpshdaRLKALSTCGSHVAVLCVFYIPS 257
Cdd:cd14967 138 WRDETQPSVVDCECEFTPNKIYVLVSSVISFFIPLLIMI-VLYARIFRVARR------ELKAAKTLAIIVGAFLLCWLPF 210
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 47606353 258 VFSFLTHRFghNIPHYIHILVANLYLVIPPF---LNPIIYGVRTKQIRE 303
Cdd:cd14967 211 FIIYLVSAF--CPPDCVPPILYAVFFWLGYLnsaLNPIIYALFNRDFRR 257
7tmA_ETH-R cd14997
ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G ...
30-165 1.22e-07

ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the ecdysis-triggering hormone receptors found in insects, which are members of the class A family of seven-transmembrane G-protein coupled receptors. Ecdysis-triggering hormones are vital regulatory signals that govern the stereotypic physiological sequence leading to cuticle shedding in insects. Thus, the ETH signaling system has been a target for the design of more sophisticated insect-selective pest control strategies. Two subtypes of ecdysis-triggering hormone receptor were identified in Drosophila melanogaster. Blood-borne ecdysis-triggering hormone (ETH) activates the behavioral sequence through direct actions on the central nervous system. In insects, ecdysis is thought to be controlled by the interaction between peptide hormones; in particular between ecdysis-triggering hormone (ETH) from the periphery and eclosion hormone (EH) and crustacean cardioactive peptide (CCAP) from the central nervous system. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320128 [Multi-domain]  Cd Length: 294  Bit Score: 52.29  E-value: 1.22e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  30 ISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWfdAHEINFGG---CVAQMFL 106
Cdd:cd14997   3 VSVVYGVIFVVGVLGNVLVGIVVWKNKDMRTPTNIFLVNLSVADLLVLLVCMPVALVETW--AREPWLLGefmCKLVPFV 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 47606353 107 IHALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYL 165
Cdd:cd14997  81 ELTVAHASVLTILAISFERYYAICHPLQAKYVCTKRRALVIIALIWLLALLTSSPVLFI 139
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
37-140 1.92e-07

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 51.47  E-value: 1.92e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWfdAHEINFGGCVAQMFLIHALTGMEAE 116
Cdd:cd15069  10 IAALSVAGNVLVCAAVGTNSTLQTPTNYFLVSLAAADVAVGLFAIPFAITISL--GFCTDFHSCLFLACFVLVLTQSSIF 87
                        90       100
                ....*....|....*....|....
gi 47606353 117 VLMAMAFDRYVAICVPLHYTTILT 140
Cdd:cd15069  88 SLLAVAVDRYLAIKVPLRYKSLVT 111
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
30-224 3.25e-07

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 50.82  E-value: 3.25e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  30 ISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDaHEINFG--GCVAQMFLI 107
Cdd:cd14979   3 VTAIYVAIFVVGIVGNLLTCIVIARHKSLRTTTNYYLFSLAVSDLLILLVGLPVELYNFWWQ-YPWAFGdgGCKLYYFLF 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 108 HALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLpfcQAHVIAHSYCEHMSI 187
Cdd:cd14979  82 EACTYATVLTIVALSVERYVAICHPLKAKTLVTKRRVKRFILAIWLVSILCAIPILFLMGIQ---YLNGPLPGPVPDSAV 158
                       170       180       190
                ....*....|....*....|....*....|....*..
gi 47606353 188 AKLSCGNIHINAVYGLFVVSFFLLNLVLIGISYGYIL 224
Cdd:cd14979 159 CTLVVDRSTFKYVFQVSTFIFFVLPMFVISILYFRIG 195
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
35-229 1.11e-06

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 49.16  E-value: 1.11e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  35 CCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVprmLGIFWFDAHEINFGGCV-------AQMFLI 107
Cdd:cd15196   8 ATILVLALFGNSCVLLVLYRRRRKLSRMHLFILHLSVADLLVALFNV---LPQLIWDITYRFYGGDLlcrlvkyLQVVGM 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 108 HALTgmeaEVLMAMAFDRYVAICVPLHYTTILTSHVLMGIsicvvvrptlFICPMIYLIYRLPfcqaHVIAHSYCEHMSI 187
Cdd:cd15196  85 YASS----YVLVATAIDRYIAICHPLSSHRWTSRRVHLMV----------AIAWVLSLLLSIP----QLFIFSYQEVGSG 146
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 47606353 188 AKLSCGNIHINAVYGL----FVVSFFLLNLVLIGISYGYILHAVFR 229
Cdd:cd15196 147 VYDCWATFEPPWGLRAyitwFTVAVFVVPLIILAFCYGRICYVVWR 192
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
29-223 1.22e-06

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 49.13  E-value: 1.22e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  29 WISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIH 108
Cdd:cd14993   2 VLIVLYVVVFLLALVGNSLVIAVVLRNKHMRTVTNYFLVNLAVADLLVSLFCMPLTLLENVYRPWVFGEVLCKAVPYLQG 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 109 ALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYL--IYRLPFCQAHVIAHSYC-EHM 185
Cdd:cd14993  82 VSVSASVLTLVAISIDRYLAICYPLKARRVSTKRRARIIIVAIWVIAIIIMLPLLVVyeLEEIISSEPGTITIYICtEDW 161
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 47606353 186 SIAKLScgniHINAVYgLFVVsFFLLNLVLIGISYGYI 223
Cdd:cd14993 162 PSPELR----KAYNVA-LFVV-LYVLPLLIISVAYSLI 193
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
37-162 1.26e-06

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 49.18  E-value: 1.26e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPrmLGIFWFDAHEINFGGCVAQMFLIHALTGMEAE 116
Cdd:cd14968  10 IAVLSVLGNVLVIWAVKLNRALRTVTNYFIVSLAVADILVGALAIP--LAILISLGLPTNFHGCLFMACLVLVLTQSSIF 87
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 47606353 117 VLMAMAFDRYVAICVPLHYTTILTS-HVLMGISICVVVRPTLFICPM 162
Cdd:cd14968  88 SLLAIAIDRYLAIKIPLRYKSLVTGrRAWGAIAVCWVLSFLVGLTPM 134
7tmA_Adenosine_R_A2A cd15068
adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G ...
37-163 3.46e-06

adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2A receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320196 [Multi-domain]  Cd Length: 293  Bit Score: 47.62  E-value: 3.46e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFwfDAHEINFGGCVAQMFLIHALTGMEAE 116
Cdd:cd15068  10 IAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFIACFVLVLTQSSIF 87
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 47606353 117 VLMAMAFDRYVAICVPLHYTTILTSHVLMG-ISICVVVRPTLFICPMI 163
Cdd:cd15068  88 SLLAIAIDRYIAIRIPLRYNGLVTGTRAKGiIAICWVLSFAIGLTPML 135
7tmA_Adenosine_R_A3 cd15070
adenosine receptor subtype A3, member of the class A family of seven-transmembrane G ...
35-162 6.85e-06

adenosine receptor subtype A3, member of the class A family of seven-transmembrane G protein-coupled receptors; The A3 receptor, a member of the adenosine receptor family of G protein-coupled receptors, is coupled to G proteins of the inhibitory G(i) family, which lead to inhibition of adenylate cyclase and thereby lowering the intracellular cAMP levels. The A3 receptor has a sustained protective function in the heart during cardiac ischemia and contributes to inhibition of neutrophil degranulation in neutrophil-mediated tissue injury. Moreover, activation of A3 receptor by adenosine protects astrocytes from cell death induced by hypoxia.


Pssm-ID: 320198 [Multi-domain]  Cd Length: 280  Bit Score: 46.69  E-value: 6.85e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  35 CCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPrmLGIFWFDAHEINFGGCVAQMFLIHALTGME 114
Cdd:cd15070   8 ILIGLCAVVGNVLVIWVVKLNPSLRTTTFYFIVSLALADIAVGVLVIP--LAIVVSLGVTIHFYSCLFMSCLLVVFTHAS 85
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 47606353 115 AEVLMAMAFDRYVAICVPLHYTTILTS-HVLMGISICVVVRPTLFICPM 162
Cdd:cd15070  86 IMSLLAIAVDRYLRVKLTVRYRIVTTQrRIWLALGLCWLVSFLVGLTPM 134
7tmA_purinoceptor-like cd14982
purinoceptor and its related proteins, member of the class A family of seven-transmembrane G ...
34-305 7.51e-06

purinoceptor and its related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this subfamily include lysophosphatidic acid receptor, P2 purinoceptor, protease-activated receptor, platelet-activating factor receptor, Epstein-Barr virus induced gene 2, proton-sensing G protein-coupled receptors, GPR35, and GPR55, among others. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341318 [Multi-domain]  Cd Length: 283  Bit Score: 46.49  E-value: 7.51e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALsTTSVPRMLgIFWFDAHEINFGGCVAQ----MFLIHa 109
Cdd:cd14982   7 YSLIFILGLLGNILALWVFLRKMKKRSPTTIYMINLALADLLF-VLTLPFRI-YYYLNGGWWPFGDFLCRltglLFYIN- 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 110 ltgMEAEV--LMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMiyLIYRLPFCQAHVIAHSYCEHMSI 187
Cdd:cd14982  84 ---MYGSIlfLTCISVDRYLAVVHPLKSRRLRRKRYAVGVCAGVWILVLVASVPL--LLLRSTIAKENNSTTCFEFLSEW 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 188 AKLSCGNIHInavyglFVVSFFLLNLVLIGISYGYILHAVFRLPSHDA----RLKALSTCGSHVAVLCVFYIPSVFSFLT 263
Cdd:cd14982 159 LASAAPIVLI------ALVVGFLIPLLIILVCYSLIIRALRRRSKQSQksvrKRKALRMILIVLAVFLVCFLPYHVTRIL 232
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 47606353 264 H-----RFGHNIPHYIHILVANLYLVIPPFLN----PIIYGVRTKQIRERV 305
Cdd:cd14982 233 YllvrlSFIADCSARNSLYKAYRITLCLASLNscldPLIYYFLSKTFRKRL 283
7tmA_NTSR1 cd15355
neurotensin receptor subtype 1, member of the class A family of seven-transmembrane G ...
30-264 3.71e-05

neurotensin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320477 [Multi-domain]  Cd Length: 310  Bit Score: 44.84  E-value: 3.71e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  30 ISLPFCCIYLVALVGNTM---ILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFG--GCVAQM 104
Cdd:cd15355   3 VTAIYLALFVVGTVGNSItlyTLARKKSLQHLQSTVHYHLASLALSDLLILLLAMPVELYNFIWVHHPWAFGdaACRGYY 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 105 FLIHALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIY---LIYRLPFCQAHVIAHSY 181
Cdd:cd15355  83 FLRDACTYATALNVASLSVERYLAICHPFKAKSLMSRSRTKKFISAIWLASALLAIPMLFtmgEQNRSGTHPGGLICTPI 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 182 CEhMSIAKLScgnIHINAVYGlfvvsfFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSF 261
Cdd:cd15355 163 VD-TSTLKVV---IQVNAFLS------FLFPMLVISVLNTLIANQLTVMVNQAEQENQVCTIGGQRTVLSVSMEPGRVQS 232

                ...
gi 47606353 262 LTH 264
Cdd:cd15355 233 LRH 235
7tmA_Adenosine_R_A1 cd15071
adenosine receptor subtype A1, member of the class A family of seven-transmembrane G ...
37-163 3.95e-05

adenosine receptor subtype A1, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine A1 receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand. The A1 receptor has primarily inhibitory function on the tissues in which it is located. The A1 receptor slows metabolic activity in the brain and has a strong anti-adrenergic effects in the heart. Thus, it antagonizes beta1-adrenergic receptor-induced stimulation and thereby reduces cardiac contractility. The A1 receptor preferentially couples to G proteins of the G(i/o) family, which lead to inhibition of adenylate cyclase and thereby lowering the intracellular cAMP levels.


Pssm-ID: 341323 [Multi-domain]  Cd Length: 290  Bit Score: 44.45  E-value: 3.95e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPrmLGIFWFDAHEINFGGCVAQMFLIHALTGMEAE 116
Cdd:cd15071  10 IALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIP--LAIIINIGPQTEFYSCLMVACPVLILTQSSIL 87
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 47606353 117 VLMAMAFDRYVAICVPLHYTTILTS-HVLMGISICVVVRPTLFICPMI 163
Cdd:cd15071  88 ALLAIAVDRYLRVKIPTRYKSVVTPrRAAVAIAGCWILSFLVGLTPMF 135
7tmA_Galanin_R-like cd14971
galanin receptor and related proteins, member of the class A family of seven-transmembrane G ...
30-302 4.13e-05

galanin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled galanin receptors, kisspeptin receptor and allatostatin-A receptor (AstA-R) in insects. These receptors, which are members of the class A of seven transmembrane GPCRs, share a high degree of sequence homology among themselves. The galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, eating disorders, and epilepsy, among many others. KiSS1-derived peptide receptor (also known as GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. AstA-R is a G-protein coupled receptor that binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320102 [Multi-domain]  Cd Length: 281  Bit Score: 44.38  E-value: 4.13e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  30 ISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHA 109
Cdd:cd14971   3 VPLFFALIFLLGLVGNSLVILVVARNKPMRSTTNLFILNLAVADLTFLLFCVPFTATIYPLPGWVFGDFMCKFVHYFQQV 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 110 LTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLiYRLPfcQAHVIAHSYCehmsiAK 189
Cdd:cd14971  83 SMHASIFTLVAMSLDRFLAVVYPLRSLHIRTPRNALAASGCIWVVSLAVAAPVLAL-HRLR--NYTPGNRTVC-----SE 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 190 LSCGNIHINAVYGLFVVSFFLLNLVLIGISYGYILHAVFRLP--------SHDARLKALSTCGSHVAVLCVFYIPSVFSF 261
Cdd:cd14971 155 AWPSRAHRRAFALCTFLFGYLLPLLLICVCYAAMLRHLWRVAvrpvlsegSRRAKRKVTRLVLVVVVLFAACWGPIHAIL 234
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 47606353 262 LTHRFG---HNIPHYIHILVANLYLVIPPFLNPIIYGVRTKQIR 302
Cdd:cd14971 235 LLVALGpfpLTYATYALRIWAHCLAYSNSAVNPVLYAFLSEHFR 278
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
26-167 4.60e-05

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 44.16  E-value: 4.60e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  26 IHAWISLPFCCIylvALVGNTMILVVIkTGRSLREPMFYFLAILSSVDLALSTTSVPrmlgIFWFDAHEINFGG------ 99
Cdd:cd14978   2 LYGYVLPVICIF---GIIGNILNLVVL-TRKSMRSSTNVYLAALAVSDILVLLSALP----LFLLPYIADYSSSflsyfy 73
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47606353 100 ---CVAQMFLIHALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIY 167
Cdd:cd14978  74 ayfLPYIYPLANTFQTASVWLTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNLPRFFEYE 144
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
122-218 7.40e-05

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 43.70  E-value: 7.40e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 122 AFDRYVAICVPLHYTTILTSHVlMGISICVVvrptlFICPMIY--LIYRLPFCQAHVIAHSYCEHmsiaklSCgNIHINA 199
Cdd:cd15055  95 AIDRYVAVCDPLLYPTKITIRR-VKICICLC-----WFVSALYssVLLYDNLNQPGLIRYNSCYG------EC-VVVVNF 161
                        90       100
                ....*....|....*....|.
gi 47606353 200 VYGLF--VVSFFLLNLVLIGI 218
Cdd:cd15055 162 IWGVVdlVLTFILPCTVMIVL 182
7tmA_GPR19 cd15008
G protein-coupled receptor 19, member of the class A family of seven-transmembrane G ...
31-135 1.82e-04

G protein-coupled receptor 19, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor 19 is an orphan receptor that is expressed predominantly in neuronal cells during mouse embryogenesis. Its mRNA is found frequently over-expressed in patients with small cell lung cancer. GPR19 shares a significant amino acid sequence identity with the D2 dopamine and neuropeptide Y families of receptors. Human GPR19 gene, intronless in the coding region, also has a distribution in brain overlapping that of the D2 dopamine receptor gene, and is located on chromosome 12. GPR19 is a member of the class A family of GPCRs, which represents a widespread protein family that includes the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320137 [Multi-domain]  Cd Length: 275  Bit Score: 42.51  E-value: 1.82e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  31 SLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHAL 110
Cdd:cd15008   3 SLVFGVLWLVSVFGNSLVCLVIHRSRRTQSTTNYFVVSMACADLLLSVASAPFVLLQFTSGRWTLGSAMCKLVRYFQYLT 82
                        90       100
                ....*....|....*....|....*
gi 47606353 111 TGMEAEVLMAMAFDRYVAICVPLHY 135
Cdd:cd15008  83 PGVQIYVLLSICVDRFYTIVYPLSF 107
7tmA_alpha1B_AR cd15326
alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
39-140 2.11e-04

alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320449 [Multi-domain]  Cd Length: 261  Bit Score: 42.19  E-value: 2.11e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  39 LVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVP-----RMLGiFWFdaheinFGGCVAQMFLIHALTGM 113
Cdd:cd15326  12 LFAIVGNILVILSVVCNRHLRIPTNYFIVNLAIADLLLSFTVLPfsatlEILG-YWV------FGRIFCDIWAAVDVLCC 84
                        90       100
                ....*....|....*....|....*....
gi 47606353 114 EAEV--LMAMAFDRYVAICVPLHYTTILT 140
Cdd:cd15326  85 TASIlsLCAISIDRYIGVRHSLQYPTIVT 113
7tmA_tyramine_octopamine_R-like cd15060
tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G ...
37-135 3.58e-04

tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine/octopamine receptors and similar proteins found in insects and other invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320188 [Multi-domain]  Cd Length: 260  Bit Score: 41.26  E-value: 3.58e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPrmLGIFWFDAHEINFGGCVAQMFLIHALTGMEAE 116
Cdd:cd15060  10 IIAFTIVGNILVILSVFTYRPLRIVQNFFIVSLAVADLAVAIFVLP--LNVAYFLLGKWLFGIHLCQMWLTCDILCCTAS 87
                        90       100
                ....*....|....*....|.
gi 47606353 117 V--LMAMAFDRYVAICVPLHY 135
Cdd:cd15060  88 IlnLCAIALDRYWAIHDPINY 108
7tmA_Trissin_R cd15012
trissin receptor and related proteins, member of the class A family of seven-transmembrane G ...
34-303 3.79e-04

trissin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the Drosophila melanogaster trissin receptor and closely related invertebrate proteins which are a member of the class A family of seven-transmembrane G-protein coupled receptors. The cysteine-rich trissin has been shown to be an endogenous ligand for the orphan CG34381 in Drosophila melanogaster. Trissin is a peptide composed of 28 amino acids with three intrachain disulfide bonds with no significant structural similarities to known endogenous peptides. Cysteine-rich peptides are known to have antimicrobial or toxicant activities, although frequently their mechanism of action is poorly understood. Since the expression of trissin and its receptor is reported to predominantly localize to the brain and thoracicoabdominal ganglion, trissin is predicted to behave as a neuropeptide. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320140 [Multi-domain]  Cd Length: 277  Bit Score: 41.28  E-value: 3.79e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15012   6 YTLVFCCCFFGNLLVILVVTSHRRMRTITNFFLANLAVADLCVGIFCVLQNLSIYLIPSWPFGEVLCRMYQFVHSLSYTA 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 114 EAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPmiYLIYRlPFCQAHVIAHSYCEHMSIakLSCG 193
Cdd:cd15012  86 SIGILVVISVERYIAILHPLRCKQLLTAARLRVTIVTVWLTSAVYNTP--YFVFS-QTVEILVTQDGQEEEICV--LDRE 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVYGLFVVSFFLLNLVLIGISYGYILHAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFL-----THRFGH 268
Cdd:cd15012 161 MFNSKLYDTINFIVWYLIPLLIMTVLYSKISIVLWKSSSIEARRKVVRLLVAVVVSFALCNLPYHARKMwqywsEPYRCD 240
                       250       260       270
                ....*....|....*....|....*....|....*
gi 47606353 269 NIPHYIHILVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15012 241 SNWNALLTPLTFLVLYFNSAVNPLLYAFLSKRFRQ 275
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
37-159 4.95e-04

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 41.11  E-value: 4.95e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGMEAE 116
Cdd:cd15001   9 TFVLGLIGNSLVIFVVARFRRMRSVTNVFLASLATADLLLLVFCVPLKTAEYFSPTWSLGAFLCKAVAYLQLLSFICSVL 88
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 47606353 117 VLMAMAFDRYVAICVPLHYTTILTSH------VLMGISICVVVRPTLFI 159
Cdd:cd15001  89 TLTAISIERYYVILHPMKAKSFCTIGrarkvaLLIWILSAILASPVLFG 137
7tmA_OT_R cd15387
oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled ...
35-133 7.06e-04

oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Oxytocin is a peptide of nine amino acids synthesized in the hypothalamus and is released from the posterior pituitary gland. Oxytocin plays an important role in sexual reproduction of both sexes and is structurally very similar to vasopressin. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320509 [Multi-domain]  Cd Length: 297  Bit Score: 40.57  E-value: 7.06e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  35 CCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSV-PRMLGIFWFDAHEINFggcVAQMFLIHALTGM 113
Cdd:cd15387   8 ALILFLALTGNICVLLAIHTTRHKHSRMYFFMKHLSIADLVVAVFQVlPQLIWDITFRFYGPDF---LCRLVKYLQVVGM 84
                        90       100
                ....*....|....*....|..
gi 47606353 114 EAE--VLMAMAFDRYVAICVPL 133
Cdd:cd15387  85 FAStyMLLLMSIDRCLAICQPL 106
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
29-150 7.45e-04

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 40.65  E-value: 7.45e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  29 WISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPrmLGIFWFDAHEINFG--GCVAQMFL 106
Cdd:cd14969   2 VLAVYLSLIGVLGVVLNGLVIIVFLKKKKLRTPLNLFLLNLALADLLMSVVGYP--LSFYSNLSGRWSFGdpGCVIYGFA 79
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....
gi 47606353 107 IHALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISIC 150
Cdd:cd14969  80 VTFLGLVSISTLAALAFERYLVIVRPLKAFRLSKRRALILIAFI 123
7tmA_Parapinopsin cd15075
non-visual parapinopsin, member of the class A family of seven-transmembrane G protein-coupled ...
41-150 8.76e-04

non-visual parapinopsin, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the non-visual pineal pigment, parapinopsin, which is a member of the class A of the seven transmembrane G protein-coupled receptors. Parapinopsin serves as a UV-sensitive pigment for the wavelength discrimination in the pineal-related organs of lower vertebrates such as reptiles, amphibians, and fish. Although parapinopsin is phylogenetically related to vertebrate visual pigments such as rhodopsin, which releases its retinal chromophore and bleaches, the parapinopsin photoproduct is stable and does not bleach. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells.


Pssm-ID: 320203 [Multi-domain]  Cd Length: 279  Bit Score: 40.15  E-value: 8.76e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  41 ALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLAL-----STTSVPRMLGIFwfdaheiNFG--GCVAQMFLIhALTGM 113
Cdd:cd15075  14 SVVLNATVIIVTLRHKQLRQPLNYALVNLAVADLGTtvfggLLSVVTNAVGYF-------NLGrvGCVLEGFAV-AFFGI 85
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 47606353 114 EAEVLMAM-AFDRYVAICVPLHYTTILTSHVLMGISIC 150
Cdd:cd15075  86 AALCTVAViAVDRLFVVCKPLGTLTFQTRHALAGIASS 123
7tmA_TACR cd15390
neurokinin receptors (or tachykinin receptors), member of the class A family of ...
31-133 1.17e-03

neurokinin receptors (or tachykinin receptors), member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320512 [Multi-domain]  Cd Length: 289  Bit Score: 39.97  E-value: 1.17e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  31 SLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMlgiFWFDAHEI-NFG--GCVAQMFLi 107
Cdd:cd15390   4 SIVFVVMVLVAIGGNLIVIWIVLAHKRMRTVTNYFLVNLAVADLLISAFNTVFN---FTYLLYNDwPFGlfYCKFSNFV- 79
                        90       100
                ....*....|....*....|....*...
gi 47606353 108 hALTGMEAEV--LMAMAFDRYVAICVPL 133
Cdd:cd15390  80 -AITTVAASVftLMAISIDRYIAIVHPL 106
7tmA_Gal2_Gal3_R cd15097
galanin receptor subtypes 2 and 3, member of the class A family of seven-transmembrane G ...
30-304 1.56e-03

galanin receptor subtypes 2 and 3, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Three receptors subtypes have been so far identified: GAL1, GAL2, and GAL3. The specific functions of each subtype remains mostly unknown, although galanin is thought to be involved in a variety of neuronal functions such as hormone release and food intake. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, depression, eating disorders, epilepsy and stroke, among many others.


Pssm-ID: 320225 [Multi-domain]  Cd Length: 279  Bit Score: 39.42  E-value: 1.56e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  30 ISLPFCCIYLVALVGNTMIL-VVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIH 108
Cdd:cd15097   3 VPVVFSLIFLLGTVGNSLVLaVLLRSGQSGHNTTNLFILNLSVADLCFILFCVPFQATIYSLEGWVFGSFLCKAVHFFIY 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 109 ALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIA 188
Cdd:cd15097  83 LTMYASSFTLAAVSVDRYLAIRYPLRSRELRTPRNAVAAIALIWGLSLLFAGPYLSYYDLIDYANSTVCMPGWEEARRKA 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 189 KLSCgnihinavygLFVVSfFLLNLVLIGISYG----YILHAVFRLPSHDARLKALSTCGSHV----AVLCVFYIPS--- 257
Cdd:cd15097 163 MDTC----------TFAFG-YLIPVLVVSLSYTrtikYLWTAVDPLEAMSESKRAKRKVTKMIiivtALFCLCWLPHhvv 231
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 47606353 258 VFSFLTHRFGHNIPHYIHILVANLYLVIPPFLNPIIYGVRTKQIRER 304
Cdd:cd15097 232 ILCYLYGDFPFNQATYAFRLLSHCMAYANSCLNPIVYALVSKHFRKG 278
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
35-133 1.76e-03

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 39.28  E-value: 1.76e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  35 CCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLAlstTSVPRMLGIFWFDAHEINFGGCV-------AQMFLI 107
Cdd:cd14986   8 GVLFVFTLVGNGLVILVLRRKRKKRSRVNIFILNLAIADLV---VAFFTVLTQIIWEATGEWVAGDVlcrivkyLQVVGL 84
                        90       100
                ....*....|....*....|....*.
gi 47606353 108 HALTGMeaevLMAMAFDRYVAICVPL 133
Cdd:cd14986  85 FASTYI----LVSMSLDRYQAIVKPM 106
7tmA_Beta_AR cd15058
beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane ...
28-140 1.86e-03

beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta adrenergic receptor (beta adrenoceptor), also known as beta AR, is activated by hormone adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate, as well as pulmonary physiology. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of beta-ARs can lead to cardiac dysfunction such as arrhythmias or heart failure. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320186 [Multi-domain]  Cd Length: 305  Bit Score: 39.36  E-value: 1.86e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  28 AWISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLI 107
Cdd:cd15058   1 PGLLLLLALIILAIVVGNLLVIIAIARTSRLQTMTNIFITSLACADLVMGLLVVPLGATIVVTGKWQLGNFWCELWTSVD 80
                        90       100       110
                ....*....|....*....|....*....|...
gi 47606353 108 HALTGMEAEVLMAMAFDRYVAICVPLHYTTILT 140
Cdd:cd15058  81 VLCVTASIETLCVIAVDRYIAITRPLRYQVLLT 113
7tmA_capaR cd15134
neuropeptide capa receptor and similar invertebrate proteins, member of the class A family of ...
30-223 1.90e-03

neuropeptide capa receptor and similar invertebrate proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; CapaR is a G-protein coupled receptor for the Drosophila melanogaster capa neuropeptides (Drm-capa-1 and -2), which act on the Malpighian tubules to increase fluid transport. The capa peptides are evolutionarily related to vertebrate Neuromedin U neuropeptide and contain a C-terminal FPRXamide motif. CapaR regulates fluid homeostasis through its ligands, thereby acts as a desiccation stress-responsive receptor. CapaR undergoes desensitization, with internalization mediated by beta-arrestin-2.


Pssm-ID: 320262 [Multi-domain]  Cd Length: 298  Bit Score: 39.24  E-value: 1.90e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  30 ISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWfDAHEINFGG--CVAQMFLI 107
Cdd:cd15134   3 ITIIYGIIFVTGVVGNLCTCIVIARNRSMHTATNYYLFSLAVSDLLLLILGLPFELYTIW-QQYPWVFGEvfCKLRAFLS 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 108 HALTGMEAEVLMAMAFDRYVAICVPLHyttiltSHVLMGISICVVVRPTLFIC--------PMIYLIYRLPFCQAhviAH 179
Cdd:cd15134  82 EMSSYASVLTITAFSVERYLAICHPLR------SHTMSKLSRAIRIIIAIWIIafvcalpfAIQTRIVYLEYPPT---SG 152
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 47606353 180 SYCEHMSIAKLSCGNIHINAVYGLFVVSFFLLNLVLIGISYGYI 223
Cdd:cd15134 153 EALEESAFCAMLNEIPPITPVFQLSTFLFFIIPMIAIIVLYVLI 196
7tmA_KiSS1R cd15095
KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of ...
34-242 2.41e-03

KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled KiSS1-derived peptide receptor (GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (previously known as metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. The KiSS1 receptor is coupled to G proteins of the G(q/11) family, which lead to activation of phospholipase C and increase of intracellular calcium. This signaling cascade plays an important role in reproduction by regulating the secretion of gonadotropin-releasing hormone.


Pssm-ID: 320223 [Multi-domain]  Cd Length: 288  Bit Score: 38.80  E-value: 2.41e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIF----WfdaheiNFGG--CVAQMFLI 107
Cdd:cd15095   7 FAIIFLVGLAGNSLVIYVVSRHREMRTVTNYYIVNLAVTDLAFLVCCVPFTAALYatpsW------VFGDfmCKFVNYMM 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 108 HALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPmIYLIYRLPFCQAHVIaHSYCEHMSI 187
Cdd:cd15095  81 QVTVQATCLTLTALSVDRYYAIVHPIRSLRFRTPRVAVVVSACIWIVSFLLSIP-VAIYYRLEEGYWYGP-QTYCREVWP 158
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 47606353 188 AKlscgniHINAVYGLFVV-SFFLLNLVLIGISYGYILHAVFRLPSHDARLKALST 242
Cdd:cd15095 159 SK------AFQKAYMIYTVlLTYVIPLAIIAVCYGLILRRLWRRSVDGNNQSEQLS 208
7tmA_CCK-BR cd15979
cholecystokinin receptor type B, member of the class A family of seven-transmembrane G ...
37-133 2.49e-03

cholecystokinin receptor type B, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320645 [Multi-domain]  Cd Length: 275  Bit Score: 39.03  E-value: 2.49e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALST-----TSVPRMLGIFWFDAheinfGGCVAQMFLIHALT 111
Cdd:cd15979  10 IFLLSVFGNMLIIVVLGLNKRLRTVTNSFLLSLALSDLMLAVfcmpfTLIPNLMGTFIFGE-----VICKAVAYLMGVSV 84
                        90       100
                ....*....|....*....|..
gi 47606353 112 GMEAEVLMAMAFDRYVAICVPL 133
Cdd:cd15979  85 SVSTFSLVAIAIERYSAICNPL 106
7tmA_OXR cd15208
orexin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
37-303 2.76e-03

orexin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Orexins (OXs, also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. Thus, activation of OX1R or OX2R will activate phospholipase activity and the phosphatidylinositol and calcium signaling pathways. Additionally, OX2R activation can also lead to inhibition of adenylate cyclase.


Pssm-ID: 320336 [Multi-domain]  Cd Length: 303  Bit Score: 38.91  E-value: 2.76e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLgifWFDAHEINFGGCVAQMfLIHALTGMEAE 116
Cdd:cd15208  10 VFIVGLVGNVLVCFAVWRNHHMRTVTNYFIVNLSLADFLVIIICLPATL---LVDVTETWFFGQVLCK-IIPYLQTVSVS 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 117 V----LMAMAFDRYVAICVPLHY--TTILTSHVLMGISI--CVVVRPTLFICPmiyliyrlpfCQAHVIAHSYCEHMSIA 188
Cdd:cd15208  86 VsvltLSCIALDRWYAICHPLMFksTAKRARVSILIIWIvsLLIMIPQAIVME----------CSRVVPLANKTILLTVC 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 189 KLSCGNIHINAVYGL-FVVSFFLLNLVLIGISYGYILHAVFR--LPSHDARLKALSTCGSH------------------- 246
Cdd:cd15208 156 DERWSDSIYQKVYHIcFFLVTYLLPLCLMILAYFQIFRKLWCrqIPGTSSVVQRKWNKPRKsavaaeekqlrsrrktakm 235
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47606353 247 ----VAVLCVFYIP-SVFSFLTHRFG--HNIPHYIHI--LVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15208 236 livvVIMFAICYLPvHLLNILRYVFGlfTVDRETIYAwfLFSHWLVYANSAINPIIYNFMSGKFRE 301
7tmA_PrRP_R cd15394
prolactin-releasing peptide receptor, member of the class A family of seven-transmembrane G ...
34-134 2.88e-03

prolactin-releasing peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prolactin-releasing peptide (PrRP) receptor (previously known as GPR10) is expressed in the central nervous system with the highest levels located in the anterior pituitary and is activated by its endogenous ligand PrRP, a neuropeptide possessing a C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acids (PrRP-20) and the other consists of 31 amino acids (PrRP-31), where PrRP-20 is a C-terminal fragment of PrRP-31. Binding of PrRP to the receptor coupled to G(i/o) proteins activates the extracellular signal-related kinase (ERK) and it can also couple to G(q) protein leading to an increase in intracellular calcium and activation of c-Jun N-terminal protein kinase (JNK). The PrRP receptor shares significant sequence homology with the neuropeptide Y (NPY) receptor, and micromolar levels of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors. PrRP has been shown to reduce food intake and body weight and modify body temperature when administered in rats. It also has been shown to decrease circulating growth hormone levels by activating somatostatin-secreting neurons in the hypothalamic periventricular nucleus.


Pssm-ID: 320516 [Multi-domain]  Cd Length: 286  Bit Score: 38.57  E-value: 2.88e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLgifwfdAHEINFGGCVAQMFLIHALTGM 113
Cdd:cd15394   7 YSLVVLVGVVGNYLLIYVICRTKKMHNVTNFLIGNLAFSDMLMCATCVPLTL------AYAFEPRGWVFGRFMCYFVFLM 80
                        90       100
                ....*....|....*....|....*...
gi 47606353 114 EAEV-------LMAMAFDRYVAICVPLH 134
Cdd:cd15394  81 QPVTvyvsvftLTAIAVDRYYVTVYPLR 108
7tmA_Ap5-HTB1-like cd15065
serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of ...
37-218 3.43e-03

serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes Aplysia californica serotonin receptors Ap5-HTB1 and Ap5-HTB2, and similar proteins from bilateria including insects, mollusks, annelids, and worms. Ap5-HTB1 is one of the several different receptors for 5-hydroxytryptamine (5HT, serotonin). In Aplysia, serotonin plays important roles in a variety of behavioral and physiological processes mediated by the central nervous system. These include circadian clock, feeding, locomotor movement, cognition and memory, synaptic growth and synaptic plasticity. Both Ap5-HTB1 and Ap5-HTB2 receptors are coupled to G-proteins that stimulate phospholipase C, leading to the activation of phosphoinositide metabolism. Ap5-HTB1 is expressed in the reproductive system, whereas Ap5-HTB2 is expressed in the central nervous system.


Pssm-ID: 320193 [Multi-domain]  Cd Length: 300  Bit Score: 38.49  E-value: 3.43e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALS----TTSVPRMLGIFWFdaheinFGGCVAQMFLIHALTG 112
Cdd:cd15065   9 IIVLAIFGNVLVCLAIFTDRRLRKKSNLFIVSLAVADLLVAllvmTFAVVNDLLGYWL------FGETFCNIWISFDVMC 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 113 MEAEV--LMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVrptlficpMIYLIYRLP-FCQAHVIAHS---YCEHMS 186
Cdd:cd15065  83 STASIlnLCAISLDRYIHIKKPLKYERWMTTRRALVVIASVWI--------LSALISFLPiHLGWHRLSQDeikGLNHAS 154
                       170       180       190
                ....*....|....*....|....*....|....
gi 47606353 187 IAKLSCGnIHINAVYGLF--VVSFFLLNLVLIGI 218
Cdd:cd15065 155 NPKPSCA-LDLNPTYAVVssLISFYIPCLVMLLI 187
7tmA_alpha2C_AR cd15323
alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G ...
39-170 3.81e-03

alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320446 [Multi-domain]  Cd Length: 261  Bit Score: 38.38  E-value: 3.81e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  39 LVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLG----IFWFdaheinFGGCVAQMFLIHALTGME 114
Cdd:cd15323  12 VFTIVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLAnelmGYWY------FGQVWCNIYLALDVLFCT 85
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47606353 115 AEV--LMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLIYRLP 170
Cdd:cd15323  86 SSIvhLCAISLDRYWSVTQAVEYNLKRTPRRVKAIIVTVWLISAVISFPPLISMYRDP 143
7tmA_NMU-R cd15133
neuromedin U receptors, member of the class A family of seven-transmembrane G protein-coupled ...
30-303 4.08e-03

neuromedin U receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuromedin U (NMU) is a highly conserved neuropeptide with a common C-terminal heptapeptide sequence (FLFRPRN-amide) found at the highest levels in the gastrointestinal tract and pituitary gland of mammals. Disruption or replacement of residues in the conserved heptapeptide region can result in the reduced ability of NMU to stimulate smooth-muscle contraction. Two G-protein coupled receptor subtypes, NMU-R1 and NMU-R2, with a distinct expression pattern, have been identified to bind NMU. NMU-R1 is expressed primarily in the peripheral nervous system, while NMU-R2 is mainly found in the central nervous system. Neuromedin S, a 36 amino-acid neuropeptide that shares a conserved C-terminal heptapeptide sequence with NMU, is a highly potent and selective NMU-R2 agonist. Pharmacological studies have shown that both NMU and NMS inhibit food intake and reduce body weight, and that NMU increases energy expenditure.


Pssm-ID: 320261 [Multi-domain]  Cd Length: 298  Bit Score: 38.28  E-value: 4.08e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  30 ISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFD-AHEINFGGCVAQMFLIH 108
Cdd:cd15133   3 VCLTYLLIFVVGVVGNVLTCLVIARHKAMRTPTNYYLFSLAVSDLLVLLLGMPLELYELWQNyPFLLGSGGCYFKTFLFE 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 109 ALTGMEAEVLMAMAFDRYVAICVPLHYTTILTSHVLMGISICVVVRPTLFICPMIYLiYRLPFCQAHVIAHSYCEHMSIA 188
Cdd:cd15133  83 TVCLASILNVTALSVERYIAVVHPLAARTCSTRPRVTRVLGCVWGVSMLCALPNTSL-HGIKFLGSGVPASAQCTVRKPQ 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 189 KLscgnihINAVYGLFVVSFFLLNLVLIGISYGYILHAVFRLPSHDAR----LKALSTCGSH----------------VA 248
Cdd:cd15133 162 AI------YNMIPQHTGHLFFVLPMAVISVLYLLMALRLARERGLDATgagsKIGTRTGQLLqhprtraqvtkmlfilVV 235
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47606353 249 VLCVFYIP-----SVFSFLTH--RFGHNIPHYIHIlVANLYLVIPPFLNPIIYGVRTKQIRE 303
Cdd:cd15133 236 VFAICWAPfhidrLMWSFISDwtDNLHEVFQYVHI-ISGVFFYLSSAVNPILYNLMSTRFRE 296
7tmA_mAChR_M3 cd15299
muscarinic acetylcholine receptor subtype M3, member of the class A family of ...
37-141 4.13e-03

muscarinic acetylcholine receptor subtype M3, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. The M3 receptor is mainly located in smooth muscle, exocrine glands and vascular endothelium. It induces vomiting in the central nervous system and is a critical regulator of glucose homeostasis by modulating insulin secretion. Generally, M3 receptor causes contraction of smooth muscle resulting in vasoconstriction and increased glandular secretion. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320426 [Multi-domain]  Cd Length: 274  Bit Score: 38.39  E-value: 4.13e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGMEAE 116
Cdd:cd15299  13 LALVTIIGNILVIVSFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFTTYIIMNRWALGNLACDLWLSIDYVASNASVM 92
                        90       100
                ....*....|....*....|....*
gi 47606353 117 VLMAMAFDRYVAICVPLHYTTILTS 141
Cdd:cd15299  93 NLLVISFDRYFSITRPLTYRAKRTT 117
7tmA_MCR cd15103
melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
34-159 4.61e-03

melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320231 [Multi-domain]  Cd Length: 270  Bit Score: 37.85  E-value: 4.61e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQ--------MF 105
Cdd:cd15103   7 FLTLGIVSLLENILVILAIAKNKNLHSPMYFFICSLAVADMLVSVSNALETIVIILLNNGYLVPRDSFEQhidnvidsMI 86
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47606353 106 LIHALTGMEAevLMAMAFDRYVAICVPLHYTTILTSH----VLMGISICVVVRPTLFI 159
Cdd:cd15103  87 CSSLLASICS--LLAIAVDRYITIFYALRYHSIMTVRragvIITAIWVFCTVCGILFI 142
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
37-152 5.07e-03

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 38.08  E-value: 5.07e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPrMLGIFWFdAHEINFGGCVAQM--FLIHALTGME 114
Cdd:cd15083  10 IGLIGVVGNGLVIYAFCRFKSLRTPANYLIINLAISDFLMCILNCP-LMVISSF-SGRWIFGKTGCDMygFSGGLFGIMS 87
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 47606353 115 AEVLMAMAFDRYVAICVPLHYTTILTsHVLMGISICVV 152
Cdd:cd15083  88 INTLAAIAVDRYLVITRPMKASVRIS-HRRALIVIAVV 124
7tmA_NTSR cd15130
neurotensin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
34-140 5.77e-03

neurotensin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320258 [Multi-domain]  Cd Length: 281  Bit Score: 37.62  E-value: 5.77e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  34 FCCIYLVALVGNTMILVVI---KTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFG--GCVAQMFLIH 108
Cdd:cd15130   7 YLALFVVGTVGNSVTLFTLarkKSLQSLQSTVRYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGdaGCRGYYFLRD 86
                        90       100       110
                ....*....|....*....|....*....|..
gi 47606353 109 ALTGMEAEVLMAMAFDRYVAICVPLHYTTILT 140
Cdd:cd15130  87 ACTYATALNVASLSVERYLAICHPFKAKTLMS 118
7tmA_TACR-like cd15202
tachykinin receptors and related receptors, member of the class A family of ...
37-133 5.85e-03

tachykinin receptors and related receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the neurokinin/tachykinin receptors and its closely related receptors such as orphan GPR83 and leucokinin-like peptide receptor. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320330 [Multi-domain]  Cd Length: 288  Bit Score: 37.87  E-value: 5.85e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVAQMFLIHALTGMEAE 116
Cdd:cd15202  10 IIVFSLFGNVLVCWIIFKNQRMRTVTNYFIVNLAVADIMITLFNTPFTFVRAVNNTWIFGLFMCHFSNFAQYCSVHVSAY 89
                        90
                ....*....|....*..
gi 47606353 117 VLMAMAFDRYVAICVPL 133
Cdd:cd15202  90 TLTAIAVDRYQAIMHPL 106
7tmA_CCK_R cd15206
cholecystokinin receptors, member of the class A family of seven-transmembrane G ...
28-225 6.11e-03

cholecystokinin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320334 [Multi-domain]  Cd Length: 269  Bit Score: 37.76  E-value: 6.11e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  28 AWISLPFCCIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALST-----TSVPRMLGIFWFDAHEinfggCVA 102
Cdd:cd15206   1 ELIIPLYSVIFLLAVVGNILVIVTLVQNKRMRTVTNVFLLNLAVSDLLLAVfcmpfTLVGQLLRNFIFGEVM-----CKL 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 103 QMFLIHALTGMEAEVLMAMAFDRYVAICVPLHYTTILT-SHVLMGISICVVVRptlFICPMIYLIYrlpfcQAHVIAHSY 181
Cdd:cd15206  76 IPYFQAVSVSVSTFTLVAISLERYFAICHPLKSRVWQTlSHAYKVIAGIWLLS---FLIMSPILVF-----SNLIPMSRP 147
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 47606353 182 CEHMSIAKLScGNIHINAVYGLFVVSFFLLNLVLIGISYGYILH 225
Cdd:cd15206 148 GGHKCREVWP-NEIAEQAWYVFLDLMLLVIPGLVMSVAYGLISW 190
7tmA_V2R cd15388
vasopressin receptor 2, member of the class A family of seven-transmembrane G protein-coupled ...
37-133 7.51e-03

vasopressin receptor 2, member of the class A family of seven-transmembrane G protein-coupled receptors; The vasopressin type 2 receptor (V2R) is a G(s)-coupled receptor that controls balance of water and sodium ion by regulating their reabsorption in the renal collecting duct. Mutations of V2R is responsible for nephrogenic diabetes insipidus. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320510 [Multi-domain]  Cd Length: 295  Bit Score: 37.45  E-value: 7.51e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  37 IYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLgiFWfDAHEINFGG---CVAQMFLihALTGM 113
Cdd:cd15388  10 IFACALLSNSLVLLVLWRRRKQLARMHVFMLHLCIADLVVAFFQVLPQL--VW-DITDRFRGPdvlCRLVKYL--QVVGM 84
                        90       100
                ....*....|....*....|..
gi 47606353 114 EAEVLM--AMAFDRYVAICVPL 133
Cdd:cd15388  85 FASSYMivAMTFDRHQAICRPM 106
7tmA_GHSR-like cd15928
growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the ...
36-302 7.88e-03

growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes growth hormone secretagogue receptor (GHSR or ghrelin receptor), motilin receptor (also called GPR38), and related proteins. Both GHSR and GPR38 bind peptide hormones. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin is also called the hunger hormone and is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. Motilin, the ligand for GPR38, is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. It is involved in the regulation of digestive tract motility.


Pssm-ID: 320594 [Multi-domain]  Cd Length: 288  Bit Score: 37.47  E-value: 7.88e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  36 CIYLVALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLaLSTTSVPRMLGIFWfDAHEINFGGCVAQMFLIHALTGMEA 115
Cdd:cd15928   9 VLMLVGASGNLLTVLVIGRSRDMRTTTNLYLSSLAVSDL-LIFLVLPLDLYRLW-RYRPWRFGDLLCRLMYFFSETCTYA 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 116 EVLMAMAF--DRYVAICVPLHYTTILTShvlmgisicvvvRPTLFICPMIYLIYRLPFCQAHVIAHSYCEHMSIAKLSCG 193
Cdd:cd15928  87 SILHITALsvERYLAICHPLRAKVLVTR------------GRVKLLIAVIWAVAIVSAGPALVLVGVEHIQGQQTPRGFE 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353 194 NIHINAVYGLFVV------SFFLLNLVLIGISYGYILHAVFRlPSHDARLKALSTCGSH----VAVLCVFYIPSVFSFLT 263
Cdd:cd15928 155 CTVVNVSSGLLSVmlwvstSFFFVPMVCLSLLYGLIGRALWD-RRQRSRTAGASRRDNNhrqtVRMLAVIVLAFVLCWLP 233
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 47606353 264 HRFGHNI----------PHYIH---ILVANLYLVIPPFLNPIIYGVRTKQIR 302
Cdd:cd15928 234 FHVGRVIfnhsrastkhLHYVSqyfNLVSFVLFYLSAAINPILYNLMSKRYR 285
7tmA_NMU-R1 cd15358
neuromedin U receptor subtype 1, member of the class A family of seven-transmembrane G ...
32-140 8.29e-03

neuromedin U receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuromedin U (NMU) is a highly conserved neuropeptide with a common C-terminal heptapeptide sequence (FLFRPRN-amide) found at the highest levels in the gastrointestinal tract and pituitary gland of mammals. Disruption or replacement of residues in the conserved heptapeptide region can result in the reduced ability of NMU to stimulate smooth-muscle contraction. Two G-protein coupled receptor subtypes, NMU-R1 and NMU-R2, with a distinct expression pattern, have been identified to bind NMU. NMU-R1 is expressed primarily in the peripheral nervous system, while NMU-R2 is mainly found in the central nervous system. Neuromedin S, a 36 amino-acid neuropeptide that shares a conserved C-terminal heptapeptide sequence with NMU, is a highly potent and selective NMU-R2 agonist. Pharmacological studies have shown that both NMU and NMS inhibit food intake and reduce body weight, and that NMU increases energy expenditure.


Pssm-ID: 320480 [Multi-domain]  Cd Length: 305  Bit Score: 37.44  E-value: 8.29e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47606353  32 LPFCCIYL----VALVGNTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFD-AHEINFGGCVAQMFL 106
Cdd:cd15358   1 TPVCVTYLlifvVGAVGNGLTCIVILRHKVMRTPTNYYLFSLAVSDLLVLLLGMPLELYEMWSNyPFLLGAGGCYFKTLL 80
                        90       100       110
                ....*....|....*....|....*....|....
gi 47606353 107 IHALTGMEAEVLMAMAFDRYVAICVPLHYTTILT 140
Cdd:cd15358  81 FETVCFASILNVTALSVERYIAVVHPLKAKYVVT 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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