podocalyxin isoform 1 precursor [Homo sapiens]
Dcp1 family protein; LCP family protein( domain architecture ID 13557104)
Dcp1 (mRNA-decapping enzyme subunit 1) family protein similar to Arabidopsis thaliana mRNA-decapping enzyme-like protein that acts as a component of the decapping complex and is involved in the degradation of mRNAs| LytR-CpsA-Psr (LCP) family protein is implicated in the attachment of anionic polymers to cell wall peptidoglycan in bacteria
List of domain hits
Name | Accession | Description | Interval | E-value | |||||
CD34_antigen | pfam06365 | CD34/Podocalyxin family; This family consists of several mammalian CD34 antigen proteins. The ... |
358-558 | 7.29e-76 | |||||
CD34/Podocalyxin family; This family consists of several mammalian CD34 antigen proteins. The CD34 antigen is a human leukocyte membrane protein expressed specifically by lymphohematopoietic progenitor cells. CD34 is a phosphoprotein. Activation of protein kinase C (PKC) has been found to enhance CD34 phosphorylation. This family contains several eukaryotic podocalyxin proteins. Podocalyxin is a major membrane protein of the glomerular epithelium and is thought to be involved in maintenance of the architecture of the foot processes and filtration slits characteriztic of this unique epithelium by virtue of its high negative charge. Podocalyxin functions as an anti-adhesin that maintains an open filtration pathway between neighbouring foot processes in the glomerular epithelium by charge repulsion. : Pssm-ID: 461884 Cd Length: 211 Bit Score: 239.26 E-value: 7.29e-76
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Herpes_BLLF1 super family | cl37540 | Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
37-304 | 1.94e-06 | |||||
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo. The actual alignment was detected with superfamily member pfam05109: Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 50.69 E-value: 1.94e-06
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Name | Accession | Description | Interval | E-value | |||||
CD34_antigen | pfam06365 | CD34/Podocalyxin family; This family consists of several mammalian CD34 antigen proteins. The ... |
358-558 | 7.29e-76 | |||||
CD34/Podocalyxin family; This family consists of several mammalian CD34 antigen proteins. The CD34 antigen is a human leukocyte membrane protein expressed specifically by lymphohematopoietic progenitor cells. CD34 is a phosphoprotein. Activation of protein kinase C (PKC) has been found to enhance CD34 phosphorylation. This family contains several eukaryotic podocalyxin proteins. Podocalyxin is a major membrane protein of the glomerular epithelium and is thought to be involved in maintenance of the architecture of the foot processes and filtration slits characteriztic of this unique epithelium by virtue of its high negative charge. Podocalyxin functions as an anti-adhesin that maintains an open filtration pathway between neighbouring foot processes in the glomerular epithelium by charge repulsion. Pssm-ID: 461884 Cd Length: 211 Bit Score: 239.26 E-value: 7.29e-76
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Herpes_BLLF1 | pfam05109 | Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
37-304 | 1.94e-06 | |||||
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo. Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 50.69 E-value: 1.94e-06
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PHA03307 | PHA03307 | transcriptional regulator ICP4; Provisional |
39-333 | 6.23e-04 | |||||
transcriptional regulator ICP4; Provisional Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.85 E-value: 6.23e-04
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Chi1 | COG3469 | Chitinase [Carbohydrate transport and metabolism]; |
33-234 | 3.41e-03 | |||||
Chitinase [Carbohydrate transport and metabolism]; Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 40.12 E-value: 3.41e-03
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Name | Accession | Description | Interval | E-value | ||||||
CD34_antigen | pfam06365 | CD34/Podocalyxin family; This family consists of several mammalian CD34 antigen proteins. The ... |
358-558 | 7.29e-76 | ||||||
CD34/Podocalyxin family; This family consists of several mammalian CD34 antigen proteins. The CD34 antigen is a human leukocyte membrane protein expressed specifically by lymphohematopoietic progenitor cells. CD34 is a phosphoprotein. Activation of protein kinase C (PKC) has been found to enhance CD34 phosphorylation. This family contains several eukaryotic podocalyxin proteins. Podocalyxin is a major membrane protein of the glomerular epithelium and is thought to be involved in maintenance of the architecture of the foot processes and filtration slits characteriztic of this unique epithelium by virtue of its high negative charge. Podocalyxin functions as an anti-adhesin that maintains an open filtration pathway between neighbouring foot processes in the glomerular epithelium by charge repulsion. Pssm-ID: 461884 Cd Length: 211 Bit Score: 239.26 E-value: 7.29e-76
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Herpes_BLLF1 | pfam05109 | Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
37-304 | 1.94e-06 | ||||||
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo. Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 50.69 E-value: 1.94e-06
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Herpes_BLLF1 | pfam05109 | Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
33-333 | 8.82e-05 | ||||||
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo. Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 45.68 E-value: 8.82e-05
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PHA03307 | PHA03307 | transcriptional regulator ICP4; Provisional |
39-333 | 6.23e-04 | ||||||
transcriptional regulator ICP4; Provisional Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.85 E-value: 6.23e-04
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Chi1 | COG3469 | Chitinase [Carbohydrate transport and metabolism]; |
33-234 | 3.41e-03 | ||||||
Chitinase [Carbohydrate transport and metabolism]; Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 40.12 E-value: 3.41e-03
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Chi1 | COG3469 | Chitinase [Carbohydrate transport and metabolism]; |
32-203 | 9.59e-03 | ||||||
Chitinase [Carbohydrate transport and metabolism]; Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 38.58 E-value: 9.59e-03
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Blast search parameters | ||||
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