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Conserved domains on  [gi|71984717|ref|NP_001021421|]
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ATP synthase subunit O, mitochondrial [Caenorhabditis elegans]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 51-224 3.75e-54

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


:

Pssm-ID: 459714  Cd Length: 172  Bit Score: 171.16  E-value: 3.75e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717    51 VEGRYAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKLgLTKETGNFLGLLAEN 130
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAENPDLAAFLSNPTISAEEKKALLLELFKGL-LSPLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717   131 GRLNKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIGKsGQKLTVTYAVKPSILGGLVVTIGDKYVD 210
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTG-KKKVKLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 71984717   211 LSIASRVKKYKDAL 224
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
 
Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 51-224 3.75e-54

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 171.16  E-value: 3.75e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717    51 VEGRYAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKLgLTKETGNFLGLLAEN 130
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAENPDLAAFLSNPTISAEEKKALLLELFKGL-LSPLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717   131 GRLNKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIGKsGQKLTVTYAVKPSILGGLVVTIGDKYVD 210
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTG-KKKVKLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 71984717   211 LSIASRVKKYKDAL 224
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 50-225 4.29e-47

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 153.39  E-value: 4.29e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717  50 GVEGRYAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKLgLTKETGNFLGLLAE 129
Cdd:COG0712   5 TIARRYAKALFELAKEKGALDEVEEELFALAALLAENPELRALLSSPVISAEEKKELLEALFGGK-LSPETLNFLKLLVE 83

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717 130 NGRLNKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKigKSGQKLTVTYAVKPSILGGLVVTIGDKYV 209
Cdd:COG0712  84 NGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEK--KTGKKVELNVKVDPSLIGGVVVRVGDKVI 161

                       170
                ....*....|....*.
gi 71984717 210 DLSIASRVKKYKDALA 225
Cdd:COG0712 162 DGSVRGRLNRLRRALK 177
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 50-225 5.51e-41

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 138.00  E-value: 5.51e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717   50 GVEGRYAAALYSAGHKQNKLDQISTDLNnVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTklGLTKETGNFLGLLAE 129
Cdd:PRK05758   6 TVARPYAKALFEVALEKGSLDAWSEELT-FLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFK--SLSEYVQNFLKVLAE 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717  130 NGRLNKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKigKSGQKLTVTYAVKPSILGGLVVTIGDKYV 209
Cdd:PRK05758  83 NGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEK--RLGRKVKLNEKVDPSLIGGVIIKVGDRVI 160

                        170
                 ....*....|....*.
gi 71984717  210 DLSIASRVKKYKDALA 225
Cdd:PRK05758 161 DGSVRGKLERLKDALK 176
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 54-224 4.45e-29

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 107.01  E-value: 4.45e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717    54 RYAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAIsTKLGLTKETGNFLGLLAENGRL 133
Cdd:TIGR01145   4 PYAKALFEIANEKSSLEEWGEMLNFVKEVLKNNKELKKFLSNPLISAEKKKEFIKNV-FGEQLDESSLNLLLLLAENGRL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717   134 NKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIGKSgQKLTVTYAVKPSILGGLVVTIGDKYVDLSI 213
Cdd:TIGR01145  83 AALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGA-AKVKLNCKVDKDLIGGVIIRIGDRVIDGSV 161

                         170
                  ....*....|.
gi 71984717   214 ASRVKKYKDAL 224
Cdd:TIGR01145 162 RGQLKRLSRQL 172
 
Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 51-224 3.75e-54

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 171.16  E-value: 3.75e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717    51 VEGRYAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKLgLTKETGNFLGLLAEN 130
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAENPDLAAFLSNPTISAEEKKALLLELFKGL-LSPLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717   131 GRLNKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIGKsGQKLTVTYAVKPSILGGLVVTIGDKYVD 210
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTG-KKKVKLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 71984717   211 LSIASRVKKYKDAL 224
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 50-225 4.29e-47

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 153.39  E-value: 4.29e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717  50 GVEGRYAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKLgLTKETGNFLGLLAE 129
Cdd:COG0712   5 TIARRYAKALFELAKEKGALDEVEEELFALAALLAENPELRALLSSPVISAEEKKELLEALFGGK-LSPETLNFLKLLVE 83

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717 130 NGRLNKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKigKSGQKLTVTYAVKPSILGGLVVTIGDKYV 209
Cdd:COG0712  84 NGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEK--KTGKKVELNVKVDPSLIGGVVVRVGDKVI 161

                       170
                ....*....|....*.
gi 71984717 210 DLSIASRVKKYKDALA 225
Cdd:COG0712 162 DGSVRGRLNRLRRALK 177
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 50-225 5.51e-41

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 138.00  E-value: 5.51e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717   50 GVEGRYAAALYSAGHKQNKLDQISTDLNnVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTklGLTKETGNFLGLLAE 129
Cdd:PRK05758   6 TVARPYAKALFEVALEKGSLDAWSEELT-FLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFK--SLSEYVQNFLKVLAE 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717  130 NGRLNKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKigKSGQKLTVTYAVKPSILGGLVVTIGDKYV 209
Cdd:PRK05758  83 NGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEK--RLGRKVKLNEKVDPSLIGGVIIKVGDRVI 160

                        170
                 ....*....|....*.
gi 71984717  210 DLSIASRVKKYKDALA 225
Cdd:PRK05758 161 DGSVRGKLERLKDALK 176
PRK13429 PRK13429
F0F1 ATP synthase subunit delta; Provisional
 54-225 3.52e-39

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237386  Cd Length: 181  Bit Score: 133.41  E-value: 3.52e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717   54 RYAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKLGLTKETGNFLGLLAENGRL 133
Cdd:PRK13429   9 RYAKALFQLAKEKGQLDSVYEELKQLAELLEDSPELRDALSNPVLSAEEKKAVLEKLLGKLKVSPEVLNFLKLLADRRRL 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717  134 NKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIgkSGQKLTVTYAVKPSILGGLVVTIGDKYVDLSI 213
Cdd:PRK13429  89 GILPEIAARYLELADEQKGIVRATVTSAVPLSEAQQEAIRQKLEKM--TGKKVELDTAVDPSLIGGVVVKIGDKVLDASV 166

                        170
                 ....*....|..
gi 71984717  214 ASRVKKYKDALA 225
Cdd:PRK13429 167 RTQLRRLKETLK 178
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 54-224 4.45e-29

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 107.01  E-value: 4.45e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717    54 RYAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAIsTKLGLTKETGNFLGLLAENGRL 133
Cdd:TIGR01145   4 PYAKALFEIANEKSSLEEWGEMLNFVKEVLKNNKELKKFLSNPLISAEKKKEFIKNV-FGEQLDESSLNLLLLLAENGRL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717   134 NKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIGKSgQKLTVTYAVKPSILGGLVVTIGDKYVDLSI 213
Cdd:TIGR01145  83 AALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGA-AKVKLNCKVDKDLIGGVIIRIGDRVIDGSV 161

                         170
                  ....*....|.
gi 71984717   214 ASRVKKYKDAL 224
Cdd:TIGR01145 162 RGQLKRLSRQL 172
atpD CHL00119
ATP synthase CF1 delta subunit; Validated
 55-219 5.14e-21

ATP synthase CF1 delta subunit; Validated


Pssm-ID: 177042  Cd Length: 184  Bit Score: 86.19  E-value: 5.14e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717   55 YAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKLgLTKETGNFLGLLAENGRLN 134
Cdd:CHL00119  12 YAEALLEFAKEKNIMEQITADIQLILTFLNESPELKKFLANPLISKNAKKEVIKKTFGSQ-INENTLKFLMVLVDRGRIA 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717  135 KLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIGKSGQ-KLTVTyaVKPSILGGLVVTIGDKYVDLSI 213
Cdd:CHL00119  91 LLDAIIEKYLELVYKLASIKIAEVSTAVPLSSAQEEALIEKLKEMTNAKEiKLVIT--VDPSLIGGFLIKIGSKVIDTSI 168


                 ....*.
gi 71984717  214 ASRVKK 219
Cdd:CHL00119 169 KGQLKQ 174
PRK13441 PRK13441
F0F1 ATP synthase subunit delta; Provisional
 51-219 1.32e-13

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184054  Cd Length: 180  Bit Score: 66.70  E-value: 1.32e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717   51 VEGRYAAALYSAGHKQNKLDQISTDLNNVRSVYKdnkKFQEFVLDPTLKANKKKTAIEAISTKLG--LTKETGNFLGLLA 128
Cdd:PRK13441   6 IASKYARALLNVAIELEKEEEYGEFLDLVCQIYE---SAKEFFDNPIVKPEKKVSLIKEIMKEFGqeMDEFFENFLNLVF 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717  129 ENGRLNKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIGKSGQKLTVTyaVKPSILGGLVVTIGDKY 208
Cdd:PRK13441  83 ENKRQKLLPQIRALFEYEKILSEQKVPVNLTTAHELSDEELKLLRKFVRKYVLRDPVFEET--IDESLIAGAVVEFEGKR 160

                        170
                 ....*....|.
gi 71984717  209 VDLSIASRVKK 219
Cdd:PRK13441 161 LDVTVQGRLKK 171
PRK13430 PRK13430
F0F1 ATP synthase subunit delta; Provisional
 57-226 1.67e-13

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237387 [Multi-domain]  Cd Length: 271  Bit Score: 67.66  E-value: 1.67e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717   57 AALYSAgHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEA-ISTKLglTKETGNFLGLLAENGRLNK 135
Cdd:PRK13430 106 ALLASA-EAQGALDDVEDELFRLGRILASNPELRLALSDRAAPAEAKRELLARlLYGKV--TPVTERLAEQAVGRPRGRS 182

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717  136 LESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIgkSGQKLTVTYAVKPSILGGLVVTIGDKYVDLSIAS 215
Cdd:PRK13430 183 IEEGLDELSNLAAARRGRSVATVTTAVPLSDEQKQRLAAALSRI--YGRPVHLNSEVDPSVLGGMRVQVGDEVIDGSVAG 260

                        170
                 ....*....|.
gi 71984717  216 RVKKYKDALAT 226
Cdd:PRK13430 261 RLERLRRRLAG 271
PRK13428 PRK13428
F0F1 ATP synthase subunit delta; Provisional
 137-224 4.46e-12

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184048 [Multi-domain]  Cd Length: 445  Bit Score: 64.75  E-value: 4.46e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717  137 ESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKIgkSGQKLTVTYAVKPSILGGLVVTIGDKYVDLSIASR 216
Cdd:PRK13428 358 EEAVLFLAELAVARRGEVVAQVSAAAELSDAQRTRLTEVLSRI--YGRPVSVQLHIDPELLGGLSIAVGDEVIDGTLSSR 435


                 ....*...
gi 71984717  217 VKKYKDAL 224
Cdd:PRK13428 436 LAAAEAQL 443
PRK13434 PRK13434
F0F1 ATP synthase subunit delta; Provisional
 50-224 4.45e-11

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 139571  Cd Length: 184  Bit Score: 59.56  E-value: 4.45e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717   50 GVEGRYAAALYSAGhkqNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLK-ANKKKTAIEAISTKLglTKETGNFLGLLA 128
Cdd:PRK13434   5 GVSKVYASALLGAA---NSPEEVEQELGDLVQLLFKDEKIRNFFLSPTVSpEEKEQTLAKNLRGKI--SDITLNFLGVLL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717  129 ENGRLNKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKigKSGQKLTVTYAVKPSILGGLVVTIGDKY 208
Cdd:PRK13434  80 NKGRFIYLPEIQKDFTVELDKKKGRVRAQIVSYPSLEPAQVDKLGSILSE--KFKSEFILEVSEDKNLLGGFVVQFNDLK 157

                        170
                 ....*....|....*.
gi 71984717  209 VDLSIASRVKKYKDAL 224
Cdd:PRK13434 158 IEKSIASQLGEIKKAM 173
PRK13436 PRK13436
F0F1 ATP synthase subunit delta; Provisional
 55-221 2.03e-08

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184053  Cd Length: 179  Bit Score: 52.36  E-value: 2.03e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717   55 YAAALYSAGHKQNKLDQISTDLNNVRSVYKDNKKFQEFVLDPTLKANKKKTAIEAISTKlGLTKETGNFLGLLAENGRLN 134
Cdd:PRK13436  11 YAEALFDIANEENNVEKYINEVFKIIEILKNNKDLIKLLTSYFIDKEEKFKIIDKIFSA-KIDIYLVNFLKILAKNNLFI 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717  135 KLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSKigKSGQKLTVTYAVKPSILGGLVVTIGDKYVDLSIA 214
Cdd:PRK13436  90 YIKQILKKFVKLSNEKLNITYGEIYTTEPLSEVQISRFESKLSK--KLNKKVHLVNKIDPKLIAGIKIKVDNKVFENSIK 167


                 ....*..
gi 71984717  215 SRVKKYK 221
Cdd:PRK13436 168 SKLKELK 174
PRK08474 PRK08474
F0F1 ATP synthase subunit delta; Validated
 54-178 3.28e-08

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 236271  Cd Length: 176  Bit Score: 51.52  E-value: 3.28e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71984717   54 RYAAALySAGHKQNKLDQISTDLNNVRSVYKDnKKFQEFVLDPTLKANKKKTAIEAISTKLGltKETGNFLGLLAENGRL 133
Cdd:PRK08474   8 RYAKAL-LSSLSSDELNDIYSNLKILSSAFAD-EKFKEIISSPEISKEQKIEFLLSFVDNAN--AKFQNFIKLLAENKRL 83

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 71984717  134 NKLESVVSSFESIMRAHRGELFVQVTSAEELSSSNQKALSDALSK 178
Cdd:PRK08474  84 ELIPAIAKELERQIALKENEYVGVVYSNEKLSEETLKKLEEKLSK 128
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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