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Conserved domains on  [gi|71995382|ref|NP_001021788|]
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Amino acid transporter [Caenorhabditis elegans]

Protein Classification

amino acid permease( domain architecture ID 1000062)

amino acid permease facilitates the transport of amino acids, similar to solute carrier family 7 (SLC7) members

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
2A0308 super family cl30119
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
19-477 1.44e-97

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00911:

Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 304.75  E-value: 1.44e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382    19 QMGLWSCMSYVIANIIGAGIFITPGTVLKLALTNGMALVVWLGCGLISLIGGICYIELGTSIRDPGCDFAYNVYVGWEGI 98
Cdd:TIGR00911  43 EITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLL 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382    99 AFSFMWVGVIMSFPASAAVQAQTFGQYIVAGLSPiwhlGSPYDVILERGLGFALIIILTVLNLYAIdKYASKFQIFVTIA 178
Cdd:TIGR00911 123 AFLRLWIELLVIRPGSQAVNALNFAIYILTPVFP----DCEVPEWAIRLVAVLCVLLLTLVNCLSV-KWATRVQDIFTAC 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   179 KLLSLAIIIVTGFWYLIvKGETEHF--KDAFTplpNEKYDIGQISLAFYGALWSFAGWDILNYGTPEIKNPRRTMPIALL 256
Cdd:TIGR00911 198 KLLALLLIIITGWVQLG-KGGVESLnpKNAFE---GTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAII 273
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   257 GGISAVTLVYMAMNVSYMTVLDTETLKNSSAVAADFARITLGDFSYAIPFMISILLIGTLNSNIFCGSRFTHAAAREGHL 336
Cdd:TIGR00911 274 ISMPIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHL 353
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   337 PTFLSCINAESNSPRAALLFQLICTIAVTFV-DTESLITYVTFVMFGQRVFTMAALLWIRYRNIPVHPdAIRVPLIFSIL 415
Cdd:TIGR00911 354 PSLLSMIHVKRLTPLPSLLIVCTLTLLMLFSgDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNR-PIKVPLFFPVF 432
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 71995382   416 FFMITIALVVTPFIEDFTTTIVGVGLVLMGFLLYMIFMKPKQLPGFLYRFNDGITRVTCKIL 477
Cdd:TIGR00911 433 FLLSCLFLIILSLYSPPVGCGVGFIIMLTGVPVYFFGVWWQNKPKWFRYLIVSKTVLLQKVL 494
 
Name Accession Description Interval E-value
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
19-477 1.44e-97

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 304.75  E-value: 1.44e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382    19 QMGLWSCMSYVIANIIGAGIFITPGTVLKLALTNGMALVVWLGCGLISLIGGICYIELGTSIRDPGCDFAYNVYVGWEGI 98
Cdd:TIGR00911  43 EITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLL 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382    99 AFSFMWVGVIMSFPASAAVQAQTFGQYIVAGLSPiwhlGSPYDVILERGLGFALIIILTVLNLYAIdKYASKFQIFVTIA 178
Cdd:TIGR00911 123 AFLRLWIELLVIRPGSQAVNALNFAIYILTPVFP----DCEVPEWAIRLVAVLCVLLLTLVNCLSV-KWATRVQDIFTAC 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   179 KLLSLAIIIVTGFWYLIvKGETEHF--KDAFTplpNEKYDIGQISLAFYGALWSFAGWDILNYGTPEIKNPRRTMPIALL 256
Cdd:TIGR00911 198 KLLALLLIIITGWVQLG-KGGVESLnpKNAFE---GTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAII 273
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   257 GGISAVTLVYMAMNVSYMTVLDTETLKNSSAVAADFARITLGDFSYAIPFMISILLIGTLNSNIFCGSRFTHAAAREGHL 336
Cdd:TIGR00911 274 ISMPIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHL 353
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   337 PTFLSCINAESNSPRAALLFQLICTIAVTFV-DTESLITYVTFVMFGQRVFTMAALLWIRYRNIPVHPdAIRVPLIFSIL 415
Cdd:TIGR00911 354 PSLLSMIHVKRLTPLPSLLIVCTLTLLMLFSgDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNR-PIKVPLFFPVF 432
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 71995382   416 FFMITIALVVTPFIEDFTTTIVGVGLVLMGFLLYMIFMKPKQLPGFLYRFNDGITRVTCKIL 477
Cdd:TIGR00911 433 FLLSCLFLIILSLYSPPVGCGVGFIIMLTGVPVYFFGVWWQNKPKWFRYLIVSKTVLLQKVL 494
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
17-454 6.66e-58

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 198.97  E-value: 6.66e-58
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  17 RHQMGLWSCMSYVIANIIGAGIFITPGTVLKLAltNGMALVVWLGCGLISLIGGICYIELGTSIRDPGCDFAYNVYVGWE 96
Cdd:COG0531  10 KRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLA--GPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGP 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  97 GIAFSFMWVGVIMSFPASAAVqAQTFGQYIVAGLSPIWHLGspydvilergLGFALIIILTVLNLYAIdKYASKFQIFVT 176
Cdd:COG0531  88 LLGFLAGWALLLSYVLAVAAV-AVAFGGYLSSLFPAGGSVL----------IALVLILLLTLLNLRGV-KESAKVNNILT 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382 177 IAKLLSLAIIIVTGFWYLIVkgetehfkDAFTPLPNEKYDIGQISLAFYGALWSFAGWDILNYGTPEIKNPRRTMPIALL 256
Cdd:COG0531 156 VLKLLVLLLFIVVGLFAFDP--------ANFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAII 227
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382 257 GGISAVTLVYMAMNVSYMTVLDTETLKNSSAVAADFARITLGD-FSYAIPFMISILLIGTLNSNIFCGSRFTHAAAREGH 335
Cdd:COG0531 228 LSLLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPwGAILIALGALLSLLGALNASILGASRLLYAMARDGL 307
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382 336 LPTFLSCINAESNSPRAALLFQLICTIAVTFV---DTESLITYVTFVMFGQRVFTMAALLWIRYRNiPVHPDAIRVPLIF 412
Cdd:COG0531 308 LPKVFAKVHPRFGTPVNAILLTGVIALLLLLLgaaSFTALASLASVGVLLAYLLVALAVIVLRRRR-PDLPRPFRVPLPL 386
                       410       420       430       440
                ....*....|....*....|....*....|....*....|..
gi 71995382 413 SILFFMITIALVVtpFIEDFTTTIVGVGLVLMGFLLYMIFMK 454
Cdd:COG0531 387 IPILGILLCLFLL--YLLGPGALLIGLVLLAIGLLLYLLYRR 426
frlA PRK11357
amino acid permease;
19-429 5.11e-34

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 133.83  E-value: 5.11e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   19 QMGLWSCMSYVIANIIGAGIFITPGTVLKLALTNGMALVVWLGCGLISLIGGICYIELGTSIRDPGCDFAYNVYVGWEGI 98
Cdd:PRK11357   9 KLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRPL 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   99 AFSFMWVGVIMSFPASAAVQAQTFGQYIVaglspiwhLGSPYDVILERGLGFALIIILTVLNLYAIDKYAsKFQIFVTIA 178
Cdd:PRK11357  89 AFLSGWASFWANDAPSLSIMALAIVSNLG--------FLTPIDPLLGKFIAAGLIIAFMLLHLRSVEGGA-AFQTLITIA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  179 KLLSLAIIIVTGFWYLivkgETEHFKDAFTPLPNEKYDIGQISLAFYGALWSFAGWDILNYGTPEIKNPRRTMPIALLGG 258
Cdd:PRK11357 160 KIIPFTIVIGLGIFWF----KAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGS 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  259 ISAVTLVYMAMNVSYMTVLDTETLKNSSAVAADFARITLGDFSYA---IPFMISILLIGTLNSNIFCGSRFTHAAAREGH 335
Cdd:PRK11357 236 CLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIPALGSTAgifVAITAMIVILGSLSSCVMYQPRLEYAMAKDNL 315
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  336 LPTFLSCINAESNSPRAALLFQliCTIAVTFV---DTESLITYVTFVMFGQRVFTMAALLWIRYRNiPVHPdAIRVPL-- 410
Cdd:PRK11357 316 FFKCFGHVHPKYNTPDVSIILQ--GALGIFFIfvsDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRD-DYKP-LWRTPAfg 391
                        410
                 ....*....|....*....
gi 71995382  411 IFSILFFMITIALVVTPFI 429
Cdd:PRK11357 392 LMTTLAIASSLILVASTFV 410
AA_permease_2 pfam13520
Amino acid permease;
21-427 2.26e-26

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 111.63  E-value: 2.26e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382    21 GLWSCMSYVIANIIGAGIFITPGTvlklaLTNGMALVVW--LGCGLISLIGGICYIELGTSIRDPGCDF-----AYNVYV 93
Cdd:pfam13520   2 GLLSAFALVIGSVIGSGIFVAPLV-----ASGGPALIVWgwIAAIIFSLAVGLVYAELSSALPRSGGIYvylenAFGKFV 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382    94 GWegIAFSFMWVGVIMSFPASAAVqaqtFGQYIVAGLSPIWhlgsPYDVILERGLGFALIIILTVLNLYAIdKYASKFQI 173
Cdd:pfam13520  77 AF--LAGWSNWFAYVLGLASSASV----AASYLLSALGPDL----VPTTWLTYGIAIAILIIFAIINIRGV-RESAKIQN 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   174 FVTIAKLLS-LAIIIVTGFWYLIVKGETEHFKDAFTPLPNekyDIGQISLAFYGALWSFAGWDILNYGTPEIKNprRTMP 252
Cdd:pfam13520 146 ILGILKLLLpLILIIILGLVTADGGGFNLLSGEWHTFFPD---GWPGVFAGFLGVLWSFTGFESAANVSEEVKK--RNVP 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   253 IALLGGISAVTLVYMAMNVSYMTVLDTETLKNSS---AVAADFARITLGD-FSYAIPFMISILLIGTLNSNIFCGSRFTH 328
Cdd:pfam13520 221 KAIFIGVIIVGVLYILVNIAFFGVVPDDEIALSSglgQVAALLFQAVGGKwGAIIVVILLALSLLGAVNTAIVGASRLLY 300
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   329 AAAREGHLP--TFLSCINAeSNSPRAALLFQLICTIAVTF------VDTESLITYVTFVMFGQRVFTMAALLWIRYRNIP 400
Cdd:pfam13520 301 ALARDGVLPfsRFFAKVNK-FGSPIRAIILTAILSLILLLlfllspAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPD 379
                         410       420
                  ....*....|....*....|....*...
gi 71995382   401 VHPDAIRVPL-IFSILFFMITIALVVTP 427
Cdd:pfam13520 380 LGRIPGRWPVaIFGILFSLFLIVALFFP 407
 
Name Accession Description Interval E-value
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
19-477 1.44e-97

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 304.75  E-value: 1.44e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382    19 QMGLWSCMSYVIANIIGAGIFITPGTVLKLALTNGMALVVWLGCGLISLIGGICYIELGTSIRDPGCDFAYNVYVGWEGI 98
Cdd:TIGR00911  43 EITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLL 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382    99 AFSFMWVGVIMSFPASAAVQAQTFGQYIVAGLSPiwhlGSPYDVILERGLGFALIIILTVLNLYAIdKYASKFQIFVTIA 178
Cdd:TIGR00911 123 AFLRLWIELLVIRPGSQAVNALNFAIYILTPVFP----DCEVPEWAIRLVAVLCVLLLTLVNCLSV-KWATRVQDIFTAC 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   179 KLLSLAIIIVTGFWYLIvKGETEHF--KDAFTplpNEKYDIGQISLAFYGALWSFAGWDILNYGTPEIKNPRRTMPIALL 256
Cdd:TIGR00911 198 KLLALLLIIITGWVQLG-KGGVESLnpKNAFE---GTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAII 273
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   257 GGISAVTLVYMAMNVSYMTVLDTETLKNSSAVAADFARITLGDFSYAIPFMISILLIGTLNSNIFCGSRFTHAAAREGHL 336
Cdd:TIGR00911 274 ISMPIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHL 353
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   337 PTFLSCINAESNSPRAALLFQLICTIAVTFV-DTESLITYVTFVMFGQRVFTMAALLWIRYRNIPVHPdAIRVPLIFSIL 415
Cdd:TIGR00911 354 PSLLSMIHVKRLTPLPSLLIVCTLTLLMLFSgDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNR-PIKVPLFFPVF 432
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 71995382   416 FFMITIALVVTPFIEDFTTTIVGVGLVLMGFLLYMIFMKPKQLPGFLYRFNDGITRVTCKIL 477
Cdd:TIGR00911 433 FLLSCLFLIILSLYSPPVGCGVGFIIMLTGVPVYFFGVWWQNKPKWFRYLIVSKTVLLQKVL 494
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
17-454 6.66e-58

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 198.97  E-value: 6.66e-58
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  17 RHQMGLWSCMSYVIANIIGAGIFITPGTVLKLAltNGMALVVWLGCGLISLIGGICYIELGTSIRDPGCDFAYNVYVGWE 96
Cdd:COG0531  10 KRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLA--GPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGP 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  97 GIAFSFMWVGVIMSFPASAAVqAQTFGQYIVAGLSPIWHLGspydvilergLGFALIIILTVLNLYAIdKYASKFQIFVT 176
Cdd:COG0531  88 LLGFLAGWALLLSYVLAVAAV-AVAFGGYLSSLFPAGGSVL----------IALVLILLLTLLNLRGV-KESAKVNNILT 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382 177 IAKLLSLAIIIVTGFWYLIVkgetehfkDAFTPLPNEKYDIGQISLAFYGALWSFAGWDILNYGTPEIKNPRRTMPIALL 256
Cdd:COG0531 156 VLKLLVLLLFIVVGLFAFDP--------ANFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAII 227
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382 257 GGISAVTLVYMAMNVSYMTVLDTETLKNSSAVAADFARITLGD-FSYAIPFMISILLIGTLNSNIFCGSRFTHAAAREGH 335
Cdd:COG0531 228 LSLLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPwGAILIALGALLSLLGALNASILGASRLLYAMARDGL 307
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382 336 LPTFLSCINAESNSPRAALLFQLICTIAVTFV---DTESLITYVTFVMFGQRVFTMAALLWIRYRNiPVHPDAIRVPLIF 412
Cdd:COG0531 308 LPKVFAKVHPRFGTPVNAILLTGVIALLLLLLgaaSFTALASLASVGVLLAYLLVALAVIVLRRRR-PDLPRPFRVPLPL 386
                       410       420       430       440
                ....*....|....*....|....*....|....*....|..
gi 71995382 413 SILFFMITIALVVtpFIEDFTTTIVGVGLVLMGFLLYMIFMK 454
Cdd:COG0531 387 IPILGILLCLFLL--YLLGPGALLIGLVLLAIGLLLYLLYRR 426
frlA PRK11357
amino acid permease;
19-429 5.11e-34

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 133.83  E-value: 5.11e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   19 QMGLWSCMSYVIANIIGAGIFITPGTVLKLALTNGMALVVWLGCGLISLIGGICYIELGTSIRDPGCDFAYNVYVGWEGI 98
Cdd:PRK11357   9 KLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRPL 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   99 AFSFMWVGVIMSFPASAAVQAQTFGQYIVaglspiwhLGSPYDVILERGLGFALIIILTVLNLYAIDKYAsKFQIFVTIA 178
Cdd:PRK11357  89 AFLSGWASFWANDAPSLSIMALAIVSNLG--------FLTPIDPLLGKFIAAGLIIAFMLLHLRSVEGGA-AFQTLITIA 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  179 KLLSLAIIIVTGFWYLivkgETEHFKDAFTPLPNEKYDIGQISLAFYGALWSFAGWDILNYGTPEIKNPRRTMPIALLGG 258
Cdd:PRK11357 160 KIIPFTIVIGLGIFWF----KAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGS 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  259 ISAVTLVYMAMNVSYMTVLDTETLKNSSAVAADFARITLGDFSYA---IPFMISILLIGTLNSNIFCGSRFTHAAAREGH 335
Cdd:PRK11357 236 CLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIPALGSTAgifVAITAMIVILGSLSSCVMYQPRLEYAMAKDNL 315
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  336 LPTFLSCINAESNSPRAALLFQliCTIAVTFV---DTESLITYVTFVMFGQRVFTMAALLWIRYRNiPVHPdAIRVPL-- 410
Cdd:PRK11357 316 FFKCFGHVHPKYNTPDVSIILQ--GALGIFFIfvsDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRD-DYKP-LWRTPAfg 391
                        410
                 ....*....|....*....
gi 71995382  411 IFSILFFMITIALVVTPFI 429
Cdd:PRK11357 392 LMTTLAIASSLILVASTFV 410
AA_permease_2 pfam13520
Amino acid permease;
21-427 2.26e-26

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 111.63  E-value: 2.26e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382    21 GLWSCMSYVIANIIGAGIFITPGTvlklaLTNGMALVVW--LGCGLISLIGGICYIELGTSIRDPGCDF-----AYNVYV 93
Cdd:pfam13520   2 GLLSAFALVIGSVIGSGIFVAPLV-----ASGGPALIVWgwIAAIIFSLAVGLVYAELSSALPRSGGIYvylenAFGKFV 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382    94 GWegIAFSFMWVGVIMSFPASAAVqaqtFGQYIVAGLSPIWhlgsPYDVILERGLGFALIIILTVLNLYAIdKYASKFQI 173
Cdd:pfam13520  77 AF--LAGWSNWFAYVLGLASSASV----AASYLLSALGPDL----VPTTWLTYGIAIAILIIFAIINIRGV-RESAKIQN 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   174 FVTIAKLLS-LAIIIVTGFWYLIVKGETEHFKDAFTPLPNekyDIGQISLAFYGALWSFAGWDILNYGTPEIKNprRTMP 252
Cdd:pfam13520 146 ILGILKLLLpLILIIILGLVTADGGGFNLLSGEWHTFFPD---GWPGVFAGFLGVLWSFTGFESAANVSEEVKK--RNVP 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   253 IALLGGISAVTLVYMAMNVSYMTVLDTETLKNSS---AVAADFARITLGD-FSYAIPFMISILLIGTLNSNIFCGSRFTH 328
Cdd:pfam13520 221 KAIFIGVIIVGVLYILVNIAFFGVVPDDEIALSSglgQVAALLFQAVGGKwGAIIVVILLALSLLGAVNTAIVGASRLLY 300
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   329 AAAREGHLP--TFLSCINAeSNSPRAALLFQLICTIAVTF------VDTESLITYVTFVMFGQRVFTMAALLWIRYRNIP 400
Cdd:pfam13520 301 ALARDGVLPfsRFFAKVNK-FGSPIRAIILTAILSLILLLlfllspAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPD 379
                         410       420
                  ....*....|....*....|....*...
gi 71995382   401 VHPDAIRVPL-IFSILFFMITIALVVTP 427
Cdd:pfam13520 380 LGRIPGRWPVaIFGILFSLFLIVALFFP 407
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
23-396 1.67e-19

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 91.80  E-value: 1.67e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382    23 WSCMSYVIANIIGAGIFITPGTVLKLalTNGMALVV-WLGCGLISLIGGICYIELGTSIRDPGCDFAYN-VYVGwEGIAF 100
Cdd:TIGR00906  33 WDLMALGIGSTIGAGIYVLTGEVARN--DSGPAIVLsFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSyVTVG-ELWAF 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   101 SFMWvGVIMSFPASAAVQAQTFGQYI-------VAGLSPIWH-LGSPYDVILERGLGFALIIILTVLNLYAIdKYASKFQ 172
Cdd:TIGR00906 110 ITGW-NLILEYVIGTAAVARSWSAYFdellnkqIGQFRRTYFkLNYDGLAEYPDFFAVCLILLLAVLLSFGV-KESAWVN 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   173 IFVTIAKLLSLAIIIVTGFwyliVKGETEHFKdaftpLPNEKYDIGQISLAFYGAL-------WSFAGWDILNYGTPEIK 245
Cdd:TIGR00906 188 KIFTAINILVLLFVIIAGF----TKADVANWS-----ITEEKGAGGFMPYGFTGVLsgaatcfFAFIGFDAIATTGEEVK 258
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   246 NPRRTMPIALLGGISAVTLVYMAMNVSYMTVLDTETLKNSSAVAADFARITLGDFSYAIPFMISILLIGTLNSNIFCGSR 325
Cdd:TIGR00906 259 NPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPDAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPLPR 338
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 71995382   326 FTHAAAREGHLPTFLSCINAESNSPRAALLFQLICTIAVTFV-DTESLITYVTFVMFGQRVFTMAALLWIRY 396
Cdd:TIGR00906 339 VIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLfDLKALVDLLSIGTLLAYSLVAACVLILRY 410
AA_permease pfam00324
Amino acid permease;
30-429 3.25e-14

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 75.05  E-value: 3.25e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382    30 IANIIGAGIFITPGTVLKLALTNGmALVVWLGCGLISLIGGICYIELGTSIRDPGCDFAYnvyvGWEGIAFSFMWVGVIM 109
Cdd:pfam00324   7 LGGVIGTGLFVGSGSVLGQAGPAG-ALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTY----ASRFLGPSLGFATGWN 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   110 SFPASAAVQAqtFGQYIVAGLSPIWHLGSpyDVILERGLGFALIIILTVLNLYAIdKYASKFQIFVTIAKLLSLAIIIVT 189
Cdd:pfam00324  82 YWLSWITVLA--LELTAASILIQFWELVP--DIPYLWVWGAVFLVLLTIINLVGV-KWYGEAEFWFALIKIIAIIGFIIV 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   190 GFWYLIVKGETEHFKDAFTPLPNEK-----YDIGQISLAFYGALWSFAGWDILNYGTPEIKNPRRTMPIALLGGISAVTL 264
Cdd:pfam00324 157 GIILLSGGNPNDGAIFRYLGDNGGKnnfppGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITI 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   265 VYMAMNVSYMTVL--DTETLKNSSAVAADFARI--TLGDFSYAIPFMISILLIGTL---NSNIFCGSRFTHAAAREGHLP 337
Cdd:pfam00324 237 FYILSLLAIGLLVpwNDPGLLNDSASAASPFVIffKFLGISGLAPLINAVILTAALsaaNSSLYSGSRMLYSLARDGLAP 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   338 TFLSCINaESNSPRAALLFQLIctIAVTFVDTESLITYVTFVMF-------GQRVFTMAALLWIRYRNI----PVHPDAI 406
Cdd:pfam00324 317 KFLKKVD-KRGVPLRAILVSMV--ISLLALLLASLNPAIVFNFLlaisglsGLIVWGLISLSHLRFRKAfkyqGRSIDEL 393
                         410       420
                  ....*....|....*....|...
gi 71995382   407 RVPLIFSILFFMITIALVVTPFI 429
Cdd:pfam00324 394 PFKAPLGPLGVILGLAAIIIILI 416
PRK10644 PRK10644
arginine/agmatine antiporter;
1-394 3.74e-13

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 71.36  E-value: 3.74e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382    1 MSSIEDLPTVGDVAATRhqmglwscmsYVIANIIGAGIFITPGTvlkLALTNGMALVVWLgcglISLIGG----ICYIEL 76
Cdd:PRK10644   1 MSSDADAHKVGLIPVTL----------MVAGNIMGSGVFLLPAN---LASTGGIAIYGWL----VTIIGAlglsMVYAKM 63
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   77 GTSIRDPGCDFAY-----NVYVGWEG--IAFSFMWVGVImsfpaSAAVQAQTFGQYIVAGLSpiwhlgspyDVILERGLG 149
Cdd:PRK10644  64 SSLDPSPGGSYAYarrcfGPFLGYQTnvLYWLACWIGNI-----AMVVIGVGYLSYFFPILK---------DPLVLTITC 129
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  150 FALIIILTVLNLYAiDKYASKFQIFVTIAKLLSLAIIIVTG-FWYlivKGETehFKDAFTPLPNEKYDIGQISLAFygAL 228
Cdd:PRK10644 130 VVVLWIFVLLNIVG-PKMITRVQAVATVLALIPIVGIAVFGwFWF---RGET--YMAAWNVSGLGTFGAIQSTLNV--TL 201
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  229 WSFAGWDILNYGTPEIKNPRRTMPIALLGGISAVTLVYMAMNVSYMTVLDTETLKNSSAVAADFARITLGDFSYAI-PFM 307
Cdd:PRK10644 202 WSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSSTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIvSFC 281
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  308 ISILLIGTLNSNIFCGSRFTHAAAREGHLPTFLSCINAE--------------------SNSPRAALLFQLICTIAVTFV 367
Cdd:PRK10644 282 AAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAgtpvagllivgvlmtifqlsSISPNASKEFGLVSSVSVIFT 361
                        410       420
                 ....*....|....*....|....*..
gi 71995382  368 DTESLITYVTFVMFGQRVFTMAALLWI 394
Cdd:PRK10644 362 LVPYLYTCAALLLLGHGHFGKARPAYL 388
PRK11021 PRK11021
putative transporter; Provisional
180-380 2.71e-05

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 46.44  E-value: 2.71e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  180 LLSLAIIIVTG--FWylivKGETEHFKDAFTPLpnEKYDIGQISLAFYGALWSFAGWDILNYGTPEIKNPRRTMPIALLG 257
Cdd:PRK11021 143 VIALLIVALVVaiWW----AGDIKPADIPFPAP--GSIEWSGLFAALGVMFWCFVGIEAFAHLASEFKNPERDFPRALMI 216
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  258 GISAVTLVYMAMNVSYMTV-LDTETLKNSSAVAADFARItLGDfsYAIpFMISIL--LIGTLNSNIFCGS--RFTHAAAR 332
Cdd:PRK11021 217 GLLLAGLVYWACTVVVLHFpAYGDKQAAAASLPGIFVQL-FGG--YAL-WVICVIgyLACFASVNIYTQSfaRLVWSQAR 292
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 71995382  333 EGHLPTFLSCINAeSNSPRAALLFQLICTIAVTFV------DTESLITYVT--FVM 380
Cdd:PRK11021 293 EGRPPSYLARLSA-RGVPVNALNAVLGCCAVSILLiyalglNLEALIAYANgiFVL 347
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
151-452 1.81e-03

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 40.89  E-value: 1.81e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   151 ALIIILTVLNLYAID--KYASKFQIFVTIAKLLSLAIIIVtgfwyLIVKGETEHFKDAFTPLPNEKYDIGQISLAFYGAL 228
Cdd:TIGR00907 149 GIHLIHALINSLPTKwlPRITSSAAYWSLLGFLTICITLL-----ACKSPKFNDGKFVFTNFNNSTGGWKPGGFAFLLGL 223
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   229 ----WSFAGWDILNYGTPEIKNPRRTMPIALLGGIS-AVTLVYMAMNVSYMTVLDTETLKNSSAVA--ADFARITLGDFS 301
Cdd:TIGR00907 224 lnpaWSMTGYDGTAHMAEEIENPEVVGPRAIIGAVAiGIVTGFCFNIVLFFSMGDIDSLISSTTGQpiAQIFYNALGNKA 303
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   302 YAIPFMISILLI--GTLNSNIFCGSRFTHAAAREGHLPT--FLSCINAESNSPRAALLFQLICTIAVTFVDTESL----- 372
Cdd:TIGR00907 304 GAIFLLCLILVTsfFCAITCMTANSRMIYAFSRDGGLPFspLWSRVNPRTQVPLNAVWLSAVWIILIGLLGLGSStafqa 383
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   373 ITYVTFVMFGQRVFTMAALLWIRYRNIPVHP-----------DAIRVPLI-FSILFFMITIALVVTPfiEDFTTTIVGVG 440
Cdd:TIGR00907 384 IFSVCTVALDVSYVIPIICKLAKGRNTIAPGpfwlgkygffvNAVAVAWTvFSSVLFSFPPVLPVTP--ENMNYAVVVFA 461
                         330
                  ....*....|..
gi 71995382   441 LVLMGFLLYMIF 452
Cdd:TIGR00907 462 GVLAISLVYWKY 473
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
34-363 4.19e-03

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 39.57  E-value: 4.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382    34 IGAGIFITPGTvlklALTNGMALVVWLGCGLISLIGgICYI----ELGTSIrdPGCDFAYNVYVGW---EGIAFSFMWVG 106
Cdd:TIGR00913  18 IGTGLLVGSGT----ALATGGPAGLLIGYAIMGSII-YCVMqslgEMATFY--PVVSGSFATYASRfvdPAFGFAVGWNY 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   107 VIM---SFPASAAVQAQTFGQYIVAGLSPIWHLgspydvilergLGFALIIILtvlNLYAIDKYAsKFQIFVTIAKLLSL 183
Cdd:TIGR00913  91 WLQwliVLPLELVTASMTIQYWTDKVNPAVWIA-----------IFYVFIVII---NLFGVKGYG-EAEFWFSSIKILAI 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   184 AIIIVTGFwYLIVKGETEH----FKDAFTPLPNEKYDIGQISLAFYG----ALWSFAGWDILNYGTPEIKNPRRTMPIAL 255
Cdd:TIGR00913 156 IGFIILSI-ILNCGGGPNHgyigFRYWHDPGAFAGGTIGGRFKGVCSvfvtAAFSFGGTELVALTAGEAANPRKSIPRAA 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   256 LGGISAVTLVYMA------MNVSYmtvlDTETLKNSSAVAAdfaritlgdfSYAIPFMISI---------------LLIG 314
Cdd:TIGR00913 235 KRTFWRILVFYILtlfligFLVPY----NDPRLLSSSSSSD----------SAASPFVIAIqnhgikvlphifnavILIS 300
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 71995382   315 TL---NSNIFCGSRFTHAAAREGHLPTFLSCINAESNSPRAALLFQLICTIA 363
Cdd:TIGR00913 301 VLsaaNSSLYASSRTLYALAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLA 352
PRK10197 PRK10197
GABA permease;
30-356 5.31e-03

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 39.22  E-value: 5.31e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382   30 IANIIGAGIFItpGTVLKLALTNGMALVVWLGCGLISLIGGICYIELGTSIRDPGC--DFAYNVYVGWEGIAFSFM-WVG 106
Cdd:PRK10197   4 IAGVIGASLFV--GSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSfsTYADKAIGRWAGYTIGWLyWWF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  107 VIMSFPASAAVQAQTFGQYIVAglSPIWHLGspydvilerglgFALIIILTVLNLYAIDKYAsKFQIFVTIAKLLSLAII 186
Cdd:PRK10197  82 WVLVIPLEANIAAMILHSWVPG--IPIWLFS------------LVITLALTGSNLLSVKNYG-EFEFWLALCKVIAILAF 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  187 I------VTGFWYLIVKGETEHFKDAFTPLPNekyDIGQISLAFYGALWSFAGWDILNYGTPEIKNPRRTMPIALLGGIS 260
Cdd:PRK10197 147 IflgavaISGFYPYAEVSGISRLWDSGGFMPN---GFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIW 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 71995382  261 AVTLVYMAmNVSYMTVLDTETLKNSSAVAADFARITLGDFSYAIPFMISILLIGT---LNSNIFCGSRFTHAAAREGHLP 337
Cdd:PRK10197 224 RISIFYLC-SIFVVVALIPWNMPGLKAVGSYRSVLELLNIPHAKLIMDCVILLSVtscLNSALYTASRMLYSLSRRGDAP 302
                        330
                 ....*....|....*....
gi 71995382  338 TFLSCINaESNSPRAALLF 356
Cdd:PRK10197 303 AVMGKIN-RSKTPYVAVLL 320
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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