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Conserved domains on  [gi|313103019|ref|NP_001034697|]
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mini-chromosome maintenance complex-binding protein [Rattus norvegicus]

Protein Classification

mini-chromosome maintenance complex-binding protein( domain architecture ID 10560849)

mini-chromosome maintenance (MCM) complex-binding protein is an associated component of the MCM complex that acts as a regulator of DNA replication; it binds to the MCM complex and promotes its disassembly from chromatin, thereby acting as a key regulator of the pre-replication complex (pre-RC) unloading from replicated DNA

Gene Ontology:  GO:0003682|GO:0006261
PubMed:  21196493

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MCM_bind pfam09739
Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 ...
36-628 0e+00

Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 residues in length containing alternating regions of conservation and low complexity. The Arabidopsis protein is a replisome factor found to bind with the mini-chromosome maintenance, MCM-binding, complex and is crucial for efficient DNA replication. The family now spans the full-length proteins.


:

Pssm-ID: 462870  Cd Length: 572  Bit Score: 903.94  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019   36 FKEKLKENNAPKWVPSLNEVPLHYLKPNSFVKFRCMIQDMFDPEFYMGVYETVNQNTKARVLHFGKYRDVAECGPQQELD 115
Cdd:pfam09739   1 FKEKLKDDSILSSIPLLNDVPLHNLKPNTLVRFRCMIQDMFDPEFYLGAYEVKNTTTGESRWRTGKYRDVAECPSQEEVD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  116 LNSPRSTTSERQTFYCVPVPGESLWVKEAYV-NANQARVSPSTSYTPSRHKRSY-EDDEDMDLQPNKQKDQHSGArqagg 193
Cdd:pfam09739  81 FNSESNVTWERQTLYCVPIPGENSWVKEHEEnNNSQARVESSTSTSSNREKRSReEDDEEMDVDVSEDKTEISSS----- 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  194 lgglHWRGEPKRLETEASSGQQLNSLNLSSPFDLNFPLPGEKGPACLVKVYEDWDCFKVNDVLELYGVLSVDPILSILNN 273
Cdd:pfam09739 156 ----EGACESKRSETDTPSSASASSSVSSADYLLNFPLPGEPGPACLVKVYDDPDEFKLNDVLEFVGVLSVDPALSAISD 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  274 EERDasalldpmeCTDMAEEQRVHSPPASLVPRIHVILAQKLQHINPLLPtclnkeESRTCQFVSNFMSELSPVRAELLG 353
Cdd:pfam09739 232 DSDD---------LMDTLEEDQAHNPPPSLVPRLHAIIVRKLSHNNPLLN------NSPNSNFEPSFPELAAAIREELLD 296
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  354 FLTHALLGDSLAAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPQ--NSTFTEHLYRIIQHLVPASFRLQMTIENMNQLK 431
Cdd:pfam09739 297 HLTHLLGGDELAAEYLLLHLISRVYSRRDVLALGKFSLNLSGLPKesLSVFTKQLYQAIQQLVPKSHYLPMTLENLNTLR 376
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  432 LIPHKDYTANRLVSGLLQLPNNTSLVIDETLLEQGQLDTPGVHNVAALSNLITWQKVDYDFSYHQMEFPCNINVLITSEG 511
Cdd:pfam09739 377 FIPKKDYTTNRLVSGVLQLAPGTHLVLDETQLQQGQLDSTGVENVTALKNLIEWQKVEYDFEYYQMEFPTDIPVLVLSEG 456
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  512 RSLLPADCQIHLQPQLIPPNM-EEYMNGLLSAVlPSVLNKFRIYLTLLRFLDYNLSDDITKAVEDDFVEMRKNDPQsITA 590
Cdd:pfam09739 457 KSMLPSDCQVPLQPDSSPSELvEEYLEAAHHYT-PELLNKFRIYLTTARLLDYSISEEMTKAIEDDFVAMRQADRK-VSA 534
                         570       580       590
                  ....*....|....*....|....*....|....*...
gi 313103019  591 DDLHQLLVVARFLSLSAGQTTLSRERWLRAKQLEHSRR 628
Cdd:pfam09739 535 DDLHRLLVLARLLSLSYGETTLSLEHWQRAKELERLRK 572
 
Name Accession Description Interval E-value
MCM_bind pfam09739
Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 ...
36-628 0e+00

Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 residues in length containing alternating regions of conservation and low complexity. The Arabidopsis protein is a replisome factor found to bind with the mini-chromosome maintenance, MCM-binding, complex and is crucial for efficient DNA replication. The family now spans the full-length proteins.


Pssm-ID: 462870  Cd Length: 572  Bit Score: 903.94  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019   36 FKEKLKENNAPKWVPSLNEVPLHYLKPNSFVKFRCMIQDMFDPEFYMGVYETVNQNTKARVLHFGKYRDVAECGPQQELD 115
Cdd:pfam09739   1 FKEKLKDDSILSSIPLLNDVPLHNLKPNTLVRFRCMIQDMFDPEFYLGAYEVKNTTTGESRWRTGKYRDVAECPSQEEVD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  116 LNSPRSTTSERQTFYCVPVPGESLWVKEAYV-NANQARVSPSTSYTPSRHKRSY-EDDEDMDLQPNKQKDQHSGArqagg 193
Cdd:pfam09739  81 FNSESNVTWERQTLYCVPIPGENSWVKEHEEnNNSQARVESSTSTSSNREKRSReEDDEEMDVDVSEDKTEISSS----- 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  194 lgglHWRGEPKRLETEASSGQQLNSLNLSSPFDLNFPLPGEKGPACLVKVYEDWDCFKVNDVLELYGVLSVDPILSILNN 273
Cdd:pfam09739 156 ----EGACESKRSETDTPSSASASSSVSSADYLLNFPLPGEPGPACLVKVYDDPDEFKLNDVLEFVGVLSVDPALSAISD 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  274 EERDasalldpmeCTDMAEEQRVHSPPASLVPRIHVILAQKLQHINPLLPtclnkeESRTCQFVSNFMSELSPVRAELLG 353
Cdd:pfam09739 232 DSDD---------LMDTLEEDQAHNPPPSLVPRLHAIIVRKLSHNNPLLN------NSPNSNFEPSFPELAAAIREELLD 296
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  354 FLTHALLGDSLAAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPQ--NSTFTEHLYRIIQHLVPASFRLQMTIENMNQLK 431
Cdd:pfam09739 297 HLTHLLGGDELAAEYLLLHLISRVYSRRDVLALGKFSLNLSGLPKesLSVFTKQLYQAIQQLVPKSHYLPMTLENLNTLR 376
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  432 LIPHKDYTANRLVSGLLQLPNNTSLVIDETLLEQGQLDTPGVHNVAALSNLITWQKVDYDFSYHQMEFPCNINVLITSEG 511
Cdd:pfam09739 377 FIPKKDYTTNRLVSGVLQLAPGTHLVLDETQLQQGQLDSTGVENVTALKNLIEWQKVEYDFEYYQMEFPTDIPVLVLSEG 456
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  512 RSLLPADCQIHLQPQLIPPNM-EEYMNGLLSAVlPSVLNKFRIYLTLLRFLDYNLSDDITKAVEDDFVEMRKNDPQsITA 590
Cdd:pfam09739 457 KSMLPSDCQVPLQPDSSPSELvEEYLEAAHHYT-PELLNKFRIYLTTARLLDYSISEEMTKAIEDDFVAMRQADRK-VSA 534
                         570       580       590
                  ....*....|....*....|....*....|....*...
gi 313103019  591 DDLHQLLVVARFLSLSAGQTTLSRERWLRAKQLEHSRR 628
Cdd:pfam09739 535 DDLHRLLVLARLLSLSYGETTLSLEHWQRAKELERLRK 572
 
Name Accession Description Interval E-value
MCM_bind pfam09739
Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 ...
36-628 0e+00

Mini-chromosome maintenance replisome factor; This entry is of proteins of approximately 600 residues in length containing alternating regions of conservation and low complexity. The Arabidopsis protein is a replisome factor found to bind with the mini-chromosome maintenance, MCM-binding, complex and is crucial for efficient DNA replication. The family now spans the full-length proteins.


Pssm-ID: 462870  Cd Length: 572  Bit Score: 903.94  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019   36 FKEKLKENNAPKWVPSLNEVPLHYLKPNSFVKFRCMIQDMFDPEFYMGVYETVNQNTKARVLHFGKYRDVAECGPQQELD 115
Cdd:pfam09739   1 FKEKLKDDSILSSIPLLNDVPLHNLKPNTLVRFRCMIQDMFDPEFYLGAYEVKNTTTGESRWRTGKYRDVAECPSQEEVD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  116 LNSPRSTTSERQTFYCVPVPGESLWVKEAYV-NANQARVSPSTSYTPSRHKRSY-EDDEDMDLQPNKQKDQHSGArqagg 193
Cdd:pfam09739  81 FNSESNVTWERQTLYCVPIPGENSWVKEHEEnNNSQARVESSTSTSSNREKRSReEDDEEMDVDVSEDKTEISSS----- 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  194 lgglHWRGEPKRLETEASSGQQLNSLNLSSPFDLNFPLPGEKGPACLVKVYEDWDCFKVNDVLELYGVLSVDPILSILNN 273
Cdd:pfam09739 156 ----EGACESKRSETDTPSSASASSSVSSADYLLNFPLPGEPGPACLVKVYDDPDEFKLNDVLEFVGVLSVDPALSAISD 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  274 EERDasalldpmeCTDMAEEQRVHSPPASLVPRIHVILAQKLQHINPLLPtclnkeESRTCQFVSNFMSELSPVRAELLG 353
Cdd:pfam09739 232 DSDD---------LMDTLEEDQAHNPPPSLVPRLHAIIVRKLSHNNPLLN------NSPNSNFEPSFPELAAAIREELLD 296
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  354 FLTHALLGDSLAAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPQ--NSTFTEHLYRIIQHLVPASFRLQMTIENMNQLK 431
Cdd:pfam09739 297 HLTHLLGGDELAAEYLLLHLISRVYSRRDVLALGKFSLNLSGLPKesLSVFTKQLYQAIQQLVPKSHYLPMTLENLNTLR 376
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  432 LIPHKDYTANRLVSGLLQLPNNTSLVIDETLLEQGQLDTPGVHNVAALSNLITWQKVDYDFSYHQMEFPCNINVLITSEG 511
Cdd:pfam09739 377 FIPKKDYTTNRLVSGVLQLAPGTHLVLDETQLQQGQLDSTGVENVTALKNLIEWQKVEYDFEYYQMEFPTDIPVLVLSEG 456
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 313103019  512 RSLLPADCQIHLQPQLIPPNM-EEYMNGLLSAVlPSVLNKFRIYLTLLRFLDYNLSDDITKAVEDDFVEMRKNDPQsITA 590
Cdd:pfam09739 457 KSMLPSDCQVPLQPDSSPSELvEEYLEAAHHYT-PELLNKFRIYLTTARLLDYSISEEMTKAIEDDFVAMRQADRK-VSA 534
                         570       580       590
                  ....*....|....*....|....*....|....*...
gi 313103019  591 DDLHQLLVVARFLSLSAGQTTLSRERWLRAKQLEHSRR 628
Cdd:pfam09739 535 DDLHRLLVLARLLSLSYGETTLSLEHWQRAKELERLRK 572
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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