NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|158517816|ref|NP_001035219|]
View 

transmembrane protein 141 isoform 1 [Mus musculus]

Protein Classification

TMEM141 domain-containing protein( domain architecture ID 10633441)

TMEM141 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
TMEM141 pfam15110
TMEM141 protein family; The function of this family of transmembrane proteins, TMEM141, has ...
 6-96 5.35e-54

TMEM141 protein family; The function of this family of transmembrane proteins, TMEM141, has not, as yet, been determined. Members of this family remain uncharacterized. TMEM141 protein family is found in eukaryotes. Proteins in this family are typically between 103 and 124 amino acids in length. There are two completely conserved residues (C and W) that may be functionally important.


:

Pssm-ID: 464509  Cd Length: 91  Bit Score: 163.32  E-value: 5.35e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158517816    6 LSRVDDAVAARHPGLEEFAACQSHAFMKGVFTFVTGTGATFGLLMFIKRKFPYPVQWSFLVSAIAGSVASYRVTSMECQK 85
Cdd:pfam15110   1 ISRLDDAVAAKHPGLQEYAACQSRAFMKGLATFVLGTAATFFLQKLVQKRLPYPLQWNLLVSAVAGSVASYQVTRVETQK 80

                          90
                  ....*....|.
gi 158517816   86 CSNLWLFLETG 96
Cdd:pfam15110  81 CQALWLALETG 91
 
Name Accession Description Interval E-value
TMEM141 pfam15110
TMEM141 protein family; The function of this family of transmembrane proteins, TMEM141, has ...
 6-96 5.35e-54

TMEM141 protein family; The function of this family of transmembrane proteins, TMEM141, has not, as yet, been determined. Members of this family remain uncharacterized. TMEM141 protein family is found in eukaryotes. Proteins in this family are typically between 103 and 124 amino acids in length. There are two completely conserved residues (C and W) that may be functionally important.


Pssm-ID: 464509  Cd Length: 91  Bit Score: 163.32  E-value: 5.35e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158517816    6 LSRVDDAVAARHPGLEEFAACQSHAFMKGVFTFVTGTGATFGLLMFIKRKFPYPVQWSFLVSAIAGSVASYRVTSMECQK 85
Cdd:pfam15110   1 ISRLDDAVAAKHPGLQEYAACQSRAFMKGLATFVLGTAATFFLQKLVQKRLPYPLQWNLLVSAVAGSVASYQVTRVETQK 80

                          90
                  ....*....|.
gi 158517816   86 CSNLWLFLETG 96
Cdd:pfam15110  81 CQALWLALETG 91
 
Name Accession Description Interval E-value
TMEM141 pfam15110
TMEM141 protein family; The function of this family of transmembrane proteins, TMEM141, has ...
 6-96 5.35e-54

TMEM141 protein family; The function of this family of transmembrane proteins, TMEM141, has not, as yet, been determined. Members of this family remain uncharacterized. TMEM141 protein family is found in eukaryotes. Proteins in this family are typically between 103 and 124 amino acids in length. There are two completely conserved residues (C and W) that may be functionally important.


Pssm-ID: 464509  Cd Length: 91  Bit Score: 163.32  E-value: 5.35e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158517816    6 LSRVDDAVAARHPGLEEFAACQSHAFMKGVFTFVTGTGATFGLLMFIKRKFPYPVQWSFLVSAIAGSVASYRVTSMECQK 85
Cdd:pfam15110   1 ISRLDDAVAAKHPGLQEYAACQSRAFMKGLATFVLGTAATFFLQKLVQKRLPYPLQWNLLVSAVAGSVASYQVTRVETQK 80

                          90
                  ....*....|.
gi 158517816   86 CSNLWLFLETG 96
Cdd:pfam15110  81 CQALWLALETG 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH