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Conserved domains on  [gi|122937187|ref|NP_001073862|]
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glucoside xylosyltransferase 2 precursor [Homo sapiens]

Protein Classification

glycosyltransferase family 8 protein( domain architecture ID 10157678)

glycosyltransferase family 8 protein similar to glucoside xylosyltransferase, which acts as a glycosyltransferase that elongates the O-linked glucose attached to EGF-like repeats in the extracellular domain of Notch proteins by catalyzing the addition of xylose

CATH:  3.90.550.10
CAZY:  GT8
EC:  2.4.-.-
Gene Ontology:  GO:0016757|GO:0006486
SCOP:  3000077

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GT8_like_2 cd06430
GT8_like_2 represents a subfamily of GT8 with unknown function; A subfamily of ...
110-413 0e+00

GT8_like_2 represents a subfamily of GT8 with unknown function; A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.


:

Pssm-ID: 133052  Cd Length: 304  Bit Score: 555.54  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 110 IHLAVVACGNRLEETLVMLKSAVLFSHRKIQFHIFTEDSLKPEFDKQLRQWPDSYTKKFEHRIYPITFSVGNPQEWKKLF 189
Cdd:cd06430    1 MHLAVVACGERLEETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEWKKLF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 190 KPCAAQRLFLPVILKDVDSLLYVDTDVLFLRPVDDIWKLLRLFNSTQLAAMAPEHEIPKIGWYSRFARHPFYGSAGVNSG 269
Cdd:cd06430   81 KPCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 270 VMLMNLTRIRSTQFKNSMIPTGLAWEDMLYPLYQKYKNAITWGDQDLLNIIFYFNPECLYVFPCQWNYRPDHCMYGSNCR 349
Cdd:cd06430  161 VMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHHNPEMLYVFPCHWNYRPDHCMYGSNCK 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 122937187 350 EAEHEGVSVLHGNRGVYHDDKQPTFRALYEAIRDFPFQDNLFQSMYYPLQLKFLETVHTLCGRI 413
Cdd:cd06430  241 AAEEEGVFILHGNRGVYHSDKQPAFRAVYEAIREYTFGDDLHQSLLRPLELSLQLTVHTYCGKA 304
 
Name Accession Description Interval E-value
GT8_like_2 cd06430
GT8_like_2 represents a subfamily of GT8 with unknown function; A subfamily of ...
110-413 0e+00

GT8_like_2 represents a subfamily of GT8 with unknown function; A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.


Pssm-ID: 133052  Cd Length: 304  Bit Score: 555.54  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 110 IHLAVVACGNRLEETLVMLKSAVLFSHRKIQFHIFTEDSLKPEFDKQLRQWPDSYTKKFEHRIYPITFSVGNPQEWKKLF 189
Cdd:cd06430    1 MHLAVVACGERLEETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEWKKLF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 190 KPCAAQRLFLPVILKDVDSLLYVDTDVLFLRPVDDIWKLLRLFNSTQLAAMAPEHEIPKIGWYSRFARHPFYGSAGVNSG 269
Cdd:cd06430   81 KPCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 270 VMLMNLTRIRSTQFKNSMIPTGLAWEDMLYPLYQKYKNAITWGDQDLLNIIFYFNPECLYVFPCQWNYRPDHCMYGSNCR 349
Cdd:cd06430  161 VMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHHNPEMLYVFPCHWNYRPDHCMYGSNCK 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 122937187 350 EAEHEGVSVLHGNRGVYHDDKQPTFRALYEAIRDFPFQDNLFQSMYYPLQLKFLETVHTLCGRI 413
Cdd:cd06430  241 AAEEEGVFILHGNRGVYHSDKQPAFRAVYEAIREYTFGDDLHQSLLRPLELSLQLTVHTYCGKA 304
RfaJ COG1442
Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope ...
110-341 3.05e-21

Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441051 [Multi-domain]  Cd Length: 301  Bit Score: 93.50  E-value: 3.05e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 110 IHLAVVACGNRLEETLVMLKSAVLFS-HRKIQFHIFTeDSLKPEFDKQLRQwpdsYTKKFEHRIYPITFsvgNPQEWKKL 188
Cdd:COG1442    6 INIVFAIDDNYLPGLGVSIASLLENNpDRPYDFHILT-DGLSDENKERLEA----LAAKYNVSIEFIDV---DDELLKDL 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 189 fkPCAAQ-------RLFLPVIL-KDVDSLLYVDTDVLFLRPVDDIWKLLrlFNStQLAAMAPEHEIPKIGWYS----RFA 256
Cdd:COG1442   78 --PVSKHiskatyyRLLIPELLpDDYDKVLYLDADTLVLGDLSELWDID--LGG-NLLAAVRDGTVTGSQKKRakrlGLP 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 257 RHPFYgsagVNSGVMLMNLTRIRSTQFKNSMIptglaweDMLyplyQKYKNAITWGDQDLLNIIfyFNPECLYVfPCQWN 336
Cdd:COG1442  153 DDDGY----FNSGVLLINLKKWREENITEKAL-------EFL----KENPDKLKYPDQDILNIV--LGGKVKFL-PPRYN 214

                 ....*
gi 122937187 337 YRPDH 341
Cdd:COG1442  215 YQYSL 219
Glyco_transf_8 pfam01501
Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to ...
111-339 3.45e-13

Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase.


Pssm-ID: 279798 [Multi-domain]  Cd Length: 252  Bit Score: 69.27  E-value: 3.45e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187  111 HLAVVACGNRLEETLVMLKSAVLF-SHRKIQFHIFTeDSLKPEFDKQLRQWPDSYtkkfeHRIYPITFSVGNPQEWKKLF 189
Cdd:pfam01501   1 CIALALDKNYLLGASVSIKSLLKNnSDFALNFHIFT-DDIPVENLDILNWLASSY-----KPVLPLLESDIKIFEYFSKL 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187  190 KPCAAQ--------RLFLPVILKDVDSLLYVDTDVLFLrpvDDIWKLLRLFNSTQLAAMAPEHEIPKIGWYS-RFARHPF 260
Cdd:pfam01501  75 KLRSPKywsllnylRLYLPDLFPKLDKILYLDADIVVQ---GDLSPLWDIDLGGKVLAAVEDNYFQRYPNFSePIILENF 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187  261 YGSAGV-NSGVMLMNLTRIRSTQFKNSMIptglAWEDMlYPLYQKYKnaitWGDQDLLNIIFYfnPECLYVfPCQWNYRP 339
Cdd:pfam01501 152 GPPACYfNAGMLLFDLDAWRKENITERYI----KWLNL-NENRTLWK----LGDQDPLNIVFY--GKVKPL-DPRWNVLG 219
 
Name Accession Description Interval E-value
GT8_like_2 cd06430
GT8_like_2 represents a subfamily of GT8 with unknown function; A subfamily of ...
110-413 0e+00

GT8_like_2 represents a subfamily of GT8 with unknown function; A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.


Pssm-ID: 133052  Cd Length: 304  Bit Score: 555.54  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 110 IHLAVVACGNRLEETLVMLKSAVLFSHRKIQFHIFTEDSLKPEFDKQLRQWPDSYTKKFEHRIYPITFSVGNPQEWKKLF 189
Cdd:cd06430    1 MHLAVVACGERLEETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEWKKLF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 190 KPCAAQRLFLPVILKDVDSLLYVDTDVLFLRPVDDIWKLLRLFNSTQLAAMAPEHEIPKIGWYSRFARHPFYGSAGVNSG 269
Cdd:cd06430   81 KPCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 270 VMLMNLTRIRSTQFKNSMIPTGLAWEDMLYPLYQKYKNAITWGDQDLLNIIFYFNPECLYVFPCQWNYRPDHCMYGSNCR 349
Cdd:cd06430  161 VMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHHNPEMLYVFPCHWNYRPDHCMYGSNCK 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 122937187 350 EAEHEGVSVLHGNRGVYHDDKQPTFRALYEAIRDFPFQDNLFQSMYYPLQLKFLETVHTLCGRI 413
Cdd:cd06430  241 AAEEEGVFILHGNRGVYHSDKQPAFRAVYEAIREYTFGDDLHQSLLRPLELSLQLTVHTYCGKA 304
Glyco_transf_8 cd00505
Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis ...
110-370 1.04e-67

Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis; Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.


Pssm-ID: 132996 [Multi-domain]  Cd Length: 246  Bit Score: 216.15  E-value: 1.04e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 110 IHLAVVACG-NRLEETLVMLKSaVLFSHRK-IQFHIFTEDsLKPEFDKQLRQWPDSYTkkFEHRIYPITFSVGNPQEW-K 186
Cdd:cd00505    1 IAIVIVATGdEYLRGAIVLMKS-VLRHRTKpLRFHVLTNP-LSDTFKAALDNLRKLYN--FNYELIPVDILDSVDSEHlK 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 187 KLFKPCAAQRLFLPVILKDVDSLLYVDTDVLFLRPVDDIWKLlrlFNSTQLAAMAPEHEIPKIGWYSRFARHPFYGSAGV 266
Cdd:cd00505   77 RPIKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDT---PLGGQELAAAPDPGDRREGKYYRQKRSHLAGPDYF 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 267 NSGVMLMNLTRIRstqfknsmiptglaWEDMLYPLYQKY---KNAITWGDQDLLNIIFYFNPECLYVFPCQWNYRPDHCM 343
Cdd:cd00505  154 NSGVFVVNLSKER--------------RNQLLKVALEKWlqsLSSLSGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCY 219
                        250       260
                 ....*....|....*....|....*..
gi 122937187 344 YGSNCREAEHEGVSVLHGNRGVYHDDK 370
Cdd:cd00505  220 RSLNCFKAFVKNAKVIHFNGPTKPWNK 246
RfaJ COG1442
Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope ...
110-341 3.05e-21

Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441051 [Multi-domain]  Cd Length: 301  Bit Score: 93.50  E-value: 3.05e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 110 IHLAVVACGNRLEETLVMLKSAVLFS-HRKIQFHIFTeDSLKPEFDKQLRQwpdsYTKKFEHRIYPITFsvgNPQEWKKL 188
Cdd:COG1442    6 INIVFAIDDNYLPGLGVSIASLLENNpDRPYDFHILT-DGLSDENKERLEA----LAAKYNVSIEFIDV---DDELLKDL 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 189 fkPCAAQ-------RLFLPVIL-KDVDSLLYVDTDVLFLRPVDDIWKLLrlFNStQLAAMAPEHEIPKIGWYS----RFA 256
Cdd:COG1442   78 --PVSKHiskatyyRLLIPELLpDDYDKVLYLDADTLVLGDLSELWDID--LGG-NLLAAVRDGTVTGSQKKRakrlGLP 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 257 RHPFYgsagVNSGVMLMNLTRIRSTQFKNSMIptglaweDMLyplyQKYKNAITWGDQDLLNIIfyFNPECLYVfPCQWN 336
Cdd:COG1442  153 DDDGY----FNSGVLLINLKKWREENITEKAL-------EFL----KENPDKLKYPDQDILNIV--LGGKVKFL-PPRYN 214

                 ....*
gi 122937187 337 YRPDH 341
Cdd:COG1442  215 YQYSL 219
GT8_A4GalT_like cd04194
A4GalT_like proteins catalyze the addition of galactose or glucose residues to the ...
125-341 4.81e-20

A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface; The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.


Pssm-ID: 133037 [Multi-domain]  Cd Length: 248  Bit Score: 88.81  E-value: 4.81e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 125 LVMLKSAVLF-SHRKIQFHIFTEDsLKPEFDKQLRQwpdsYTKKFEHRIYPITFSVGNpqewkKLFKPCAAQ-------- 195
Cdd:cd04194   16 AVTIKSILANnSKRDYDFYILNDD-ISEENKKKLKE----LLKKYNSSIEFIKIDNDD-----FKFFPATTDhisyatyy 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 196 RLFLPVILKDVDSLLYVDTDVLFLRPVDDIWKLLrLfnSTQLAAMAPEHEIPKIgWYSRFARHPFYGSAGVNSGVMLMNL 275
Cdd:cd04194   86 RLLIPDLLPDYDKVLYLDADIIVLGDLSELFDID-L--GDNLLAAVRDPFIEQE-KKRKRRLGGYDDGSYFNSGVLLINL 161
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 122937187 276 TRIRSTQFKNSMIptglaweDMLyplyQKYKNAITWGDQDLLNIIFYfnPECLYVfPCQWNYRPDH 341
Cdd:cd04194  162 KKWREENITEKLL-------ELI----KEYGGRLIYPDQDILNAVLK--DKILYL-PPRYNFQTGF 213
GT8_LARGE_C cd06431
LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in ...
110-362 7.03e-15

LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis; The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil motif, and two putative catalytic domains. This catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis.


Pssm-ID: 133053  Cd Length: 280  Bit Score: 74.43  E-value: 7.03e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 110 IHLAVVACGNRLEETLVMLKSAVLF-SHRKIQFHIFTEDSLKPEFDKQLRQWPDSYTKKFEHriypitfsvgNPQEWKKL 188
Cdd:cd06431    1 IHVAIVCAGYNASRDVVTLVKSVLFyRRNPLHFHLITDEIARRILATLFQTWMVPAVEVSFY----------NAEELKSR 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 189 F---------KPCAAQRLFLPVIL-KDVDSLLYVDTDVLFLRPVDDIWKLLRLFNSTQLAAMAPEHEipkiGWY--SRFA 256
Cdd:cd06431   71 VswipnkhysGIYGLMKLVLTEALpSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQS----DWYlgNLWK 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 257 RH---PFYGSaGVNSGVMLMNLTRIRStqfknsmiptgLAWEDMLYPLYQKYKNAI---TWGDQDLLNIIFYFNPECLYV 330
Cdd:cd06431  147 NHrpwPALGR-GFNTGVILLDLDKLRK-----------MKWESMWRLTAERELMSMlstSLADQDIFNAVIKQNPFLVYQ 214
                        250       260       270
                 ....*....|....*....|....*....|...
gi 122937187 331 FPCQWNYR-PDHCMYGSNCREAEHegVSVLHGN 362
Cdd:cd06431  215 LPCAWNVQlSDHTRSEQCYRDVSD--LKVIHWN 245
Glyco_transf_8 pfam01501
Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to ...
111-339 3.45e-13

Glycosyl transferase family 8; This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase.


Pssm-ID: 279798 [Multi-domain]  Cd Length: 252  Bit Score: 69.27  E-value: 3.45e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187  111 HLAVVACGNRLEETLVMLKSAVLF-SHRKIQFHIFTeDSLKPEFDKQLRQWPDSYtkkfeHRIYPITFSVGNPQEWKKLF 189
Cdd:pfam01501   1 CIALALDKNYLLGASVSIKSLLKNnSDFALNFHIFT-DDIPVENLDILNWLASSY-----KPVLPLLESDIKIFEYFSKL 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187  190 KPCAAQ--------RLFLPVILKDVDSLLYVDTDVLFLrpvDDIWKLLRLFNSTQLAAMAPEHEIPKIGWYS-RFARHPF 260
Cdd:pfam01501  75 KLRSPKywsllnylRLYLPDLFPKLDKILYLDADIVVQ---GDLSPLWDIDLGGKVLAAVEDNYFQRYPNFSePIILENF 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187  261 YGSAGV-NSGVMLMNLTRIRSTQFKNSMIptglAWEDMlYPLYQKYKnaitWGDQDLLNIIFYfnPECLYVfPCQWNYRP 339
Cdd:pfam01501 152 GPPACYfNAGMLLFDLDAWRKENITERYI----KWLNL-NENRTLWK----LGDQDPLNIVFY--GKVKPL-DPRWNVLG 219
GT8_Glycogenin cd02537
Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen; Glycogenin ...
207-360 4.81e-05

Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen; Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.


Pssm-ID: 133018 [Multi-domain]  Cd Length: 240  Bit Score: 44.56  E-value: 4.81e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 122937187 207 DSLLYVDTDVLFLRPVDDIWKLlrlfnSTQLAAmapeheIPKIGWYSRFarhpfygsagvNSGVMLMnltrirstqfkns 286
Cdd:cd02537   91 DKVVFLDADTLVLRNIDELFDL-----PGEFAA------APDCGWPDLF-----------NSGVFVL------------- 135
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 122937187 287 mIPTGLAWEDMLyplyQKYKNAITW--GDQDLLNIifYFNPECLYV-FPCQWNYRPDHCMYGSNCREAEHEgVSVLH 360
Cdd:cd02537  136 -KPSEETFNDLL----DALQDTPSFdgGDQGLLNS--YFSDRGIWKrLPFTYNALKPLRYLHPEALWFGDE-IKVVH 204
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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