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Conserved domains on  [gi|1677537626|ref|NP_001074020|]
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protein shortage in chiasmata 1 ortholog isoform 2 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF5587 pfam17825
Family of unknown function (DUF5587); This is a family of unknown function found in chordata.
46-1405 0e+00

Family of unknown function (DUF5587); This is a family of unknown function found in chordata.


:

Pssm-ID: 465523  Cd Length: 1442  Bit Score: 2631.14  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626   46 LFIDDKGILFVSS----RKHLPTLPTLLSRLKLFLVKDPLLDFKGQIFTEANFSRECFSLQETLEAFVKEDFCMDKVNFC 121
Cdd:pfam17825   85 LFIDDEEIIFVNNlatyKSHLPTLNTLLSRLKLFLIKDPLLDFKEQIFTEANFFREYFSFQEDLEPFVKEDFYMDKENFC 164
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  122 QEKLEdticlNEPSSFLIEYEFLIPPSLKPEIDIPSLSELKELLNPVPEIINYVDEKEKLFERDLTNKHGIeDIGDIKFS 201
Cdd:pfam17825  165 QEKLE-----NETPSFLSECEFLISTSLKQEIDIPSPSELKESLNLVPEIINYVDENEKLFKRDLTTKHGI-DIEDIKCS 238
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  202 STEILTIQSQSEPEeCSKPGELEMPLTPLFLTCQHSSVNSLRTELQTFPLSPVCKINLLTAEESANEYYMMWQLERCRSP 281
Cdd:pfam17825  239 STEILAIQSQCEPE-CSEPGELEMPLTPLHLTNQHSSVNSLCTGLQTFPFSPVCKINLLTAEESANKYCMVWQLESCRSS 317
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  282 LNPFLLTVPRIQEPHSQYSVTDLKKIFSVKEESLVINLEKAEWWKQAGLNLKMMETLEHLNTYLCHDNLSSNDTKIEIFL 361
Cdd:pfam17825  318 LNSFLLTVPRTQEPNSQYSVTDLKKIFSIKEESLVINPVKAEWWKQAGLNLIMTETLEHLNTYLCHDDLSSDDTKMEIFL 397
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  362 PTKVLQLESCLEHKSHSSPIALIDEKSTNAHLSLPQKSPSLAKEVPDLCFSDDYFSDKGAAKEEKPKNDQEPVNRIIQKK 441
Cdd:pfam17825  398 PTKVLQLESWLEHKSCSSPIVLINEKSTNDHLLLPQKSPSPAKEVPDLCFSDEYISVKKPKKEEKPKNDQEPVARIIQKK 477
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  442 ENNDHFELDCTGPSIKSPSSSIIKKASFEHGKKQENDLDLLSDFIMLRNKYKTCTSKTEVTNSDEKHDKEACSLTLQEES 521
Cdd:pfam17825  478 ENNDCLELDCTVPSIESSSSSKIEKASFKHGKKQENDLDLLSDFIMLRNKYKTCTSKTEVTDSDEKNDKEEYSLTLQEES 557
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  522 PIVHINKTLEEINQERGTDSVIEIQASDSQCQAFCLLEAAASPILKNLVSLCTLPTANWKFATVIFDQTRFLLKEQEKVV 601
Cdd:pfam17825  558 PVVSTNKTLEKINQERRADNVIEIQASDSQCQAYCLLEAAATPILKKLVCLCTLPAANWKFATVIFDQTRFFLKEQEKVI 637
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  602 SDAVRQGTIDEREMTFKHAALLHLLVTIRDVLLTCSLDTALGYLSKAKDIYNSILGPYLGDIWRQLEIVQFIRGKKPETN 681
Cdd:pfam17825  638 SDAIHQGTNDEREMTFKHAALLHLLVTIRDVLLTCSLDTALGYLSNAKDIYKSILGSYLDDIWRQLEIVQFIREKNPETN 717
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  682 YKIQELQCQILSWMQSQQQIKVLIIIRMDSDGEKHFLIKILNKIEGLTLTVLHSNERKDFLESEGVLRGTSSCVVVHNQY 761
Cdd:pfam17825  718 YKIQELQCQILSWMQSEQQIKVLIIIRMDSDGEKHLLIKILNKIEGLTLTVLHSNKRKDFLESEGVLNGTSSCVVVHNQY 797
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  762 IGADFPWSNFSFVVEYNYVEDSCWTKHCKELNIPYMAFKVILPDTVLERSTLLDRFGGFLLEIQIPYVFFASEGLLNTPD 841
Cdd:pfam17825  798 IGADFPWSNFSFVVEYNYVENSCWTKHCKKLNIPYMAFKVILPDTVLKRSTLLDRFGGFLLEIQIPYVFFASEGLLNTPE 877
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  842 ILQLLESNYNISLVERGCSESLKLFGSSECYVVVTIDEHTAIILQDLEELNYEKASDNIIMRLMALSLQYRYCWIILYTK 921
Cdd:pfam17825  878 ILQLLESNYNITLVERCCSESLKLFGGTECYVVVTIDEHTAIILQDLEELNCEKASDNIIMRLMALSFQYSYCWIILYTK 957
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  922 ETLNSEYLLTEKTLHHLALIYAALVSFGLNSEELDVKLIIAPGVEATALIIRQIADHSLMTSKRDPHEWLDKSWLKVSPS 1001
Cdd:pfam17825  958 ETLNSEYHLTEKTLHHLALIYAALVSFGLKSEELDVKLIIAPGVEETALIIRQIADHNLMTSKRDPHEWLDKSWLEVSPS 1037
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626 1002 EEEMYLLDFPCINPLVAQLMLNKGPSLHWILLATLCQLQELLPEVPEKVLKHFCSITSLFKIGSSSITKSPQISSPQENR 1081
Cdd:pfam17825 1038 KEEMYLLDFPCINPLVAQLMLNKGPSLHWILLATLCQLQELLPEVPEKVLKHFCSITSLFKISSSSITKSPQISSPQENG 1117
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626 1082 NQISTLSSQSSASDLDSVIQEHNEYYQYLGLGETVQEDKTTILNDNSSIMELKEISSFLPPVTSYNQTSYWKDSSCKSNI 1161
Cdd:pfam17825 1118 NQTSTFISQSSASGSDSVIQEHNEYYQYSDLGETVQEDTNTTSNDNSSLMELREMPCVLPPVTSYSQTSYWKDSSCNPNI 1197
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626 1162 GQNTPFLINIESRRPAYNSFLNHSDSESDVFSLGLTQMNCETIKSPTDTQKRVSvvPRFINSQKRRTHEAKGFINKDVSD 1241
Cdd:pfam17825 1198 VQNNPFLINIESRKVAGNSFLNQNDSESDVFSLGLTQMNCETIISPIDTQRRVA--PNFINYQKKGTHEAKGPINKEVSA 1275
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626 1242 PIFSLEGTQSPLHWNFKKNIWEQENHPFNLQYGAQQTACNKLYSQKGNLFTDQQKCLSDESEGLTCESSKD---ETFWRE 1318
Cdd:pfam17825 1276 PVFSLEGSQSPLHWNFKKNVWEQQNHSFNLQYGAEQTTCDKWYSQKDNLFTNQQKCLSDELEGLTYESSNAgtkETFWRE 1355
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626 1319 LPSVPSLDLFRASDSNANQKEFNSLYFYQRAGKSLGQKRHHESSFNSGDKESLTGFMCSQLPQFKKRRLAYEKVPGRVDG 1398
Cdd:pfam17825 1356 LPSVPSLDLFCASDSNVNQKEFNSLYFYQRAGKCLGQKRHLESSSNSGDKKSLTDLMCSQLPQFKKRRLVYEKVPGRADG 1435

                   ....*..
gi 1677537626 1399 QTRLRFF 1405
Cdd:pfam17825 1436 QTRLRFF 1442
 
Name Accession Description Interval E-value
DUF5587 pfam17825
Family of unknown function (DUF5587); This is a family of unknown function found in chordata.
46-1405 0e+00

Family of unknown function (DUF5587); This is a family of unknown function found in chordata.


Pssm-ID: 465523  Cd Length: 1442  Bit Score: 2631.14  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626   46 LFIDDKGILFVSS----RKHLPTLPTLLSRLKLFLVKDPLLDFKGQIFTEANFSRECFSLQETLEAFVKEDFCMDKVNFC 121
Cdd:pfam17825   85 LFIDDEEIIFVNNlatyKSHLPTLNTLLSRLKLFLIKDPLLDFKEQIFTEANFFREYFSFQEDLEPFVKEDFYMDKENFC 164
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  122 QEKLEdticlNEPSSFLIEYEFLIPPSLKPEIDIPSLSELKELLNPVPEIINYVDEKEKLFERDLTNKHGIeDIGDIKFS 201
Cdd:pfam17825  165 QEKLE-----NETPSFLSECEFLISTSLKQEIDIPSPSELKESLNLVPEIINYVDENEKLFKRDLTTKHGI-DIEDIKCS 238
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  202 STEILTIQSQSEPEeCSKPGELEMPLTPLFLTCQHSSVNSLRTELQTFPLSPVCKINLLTAEESANEYYMMWQLERCRSP 281
Cdd:pfam17825  239 STEILAIQSQCEPE-CSEPGELEMPLTPLHLTNQHSSVNSLCTGLQTFPFSPVCKINLLTAEESANKYCMVWQLESCRSS 317
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  282 LNPFLLTVPRIQEPHSQYSVTDLKKIFSVKEESLVINLEKAEWWKQAGLNLKMMETLEHLNTYLCHDNLSSNDTKIEIFL 361
Cdd:pfam17825  318 LNSFLLTVPRTQEPNSQYSVTDLKKIFSIKEESLVINPVKAEWWKQAGLNLIMTETLEHLNTYLCHDDLSSDDTKMEIFL 397
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  362 PTKVLQLESCLEHKSHSSPIALIDEKSTNAHLSLPQKSPSLAKEVPDLCFSDDYFSDKGAAKEEKPKNDQEPVNRIIQKK 441
Cdd:pfam17825  398 PTKVLQLESWLEHKSCSSPIVLINEKSTNDHLLLPQKSPSPAKEVPDLCFSDEYISVKKPKKEEKPKNDQEPVARIIQKK 477
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  442 ENNDHFELDCTGPSIKSPSSSIIKKASFEHGKKQENDLDLLSDFIMLRNKYKTCTSKTEVTNSDEKHDKEACSLTLQEES 521
Cdd:pfam17825  478 ENNDCLELDCTVPSIESSSSSKIEKASFKHGKKQENDLDLLSDFIMLRNKYKTCTSKTEVTDSDEKNDKEEYSLTLQEES 557
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  522 PIVHINKTLEEINQERGTDSVIEIQASDSQCQAFCLLEAAASPILKNLVSLCTLPTANWKFATVIFDQTRFLLKEQEKVV 601
Cdd:pfam17825  558 PVVSTNKTLEKINQERRADNVIEIQASDSQCQAYCLLEAAATPILKKLVCLCTLPAANWKFATVIFDQTRFFLKEQEKVI 637
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  602 SDAVRQGTIDEREMTFKHAALLHLLVTIRDVLLTCSLDTALGYLSKAKDIYNSILGPYLGDIWRQLEIVQFIRGKKPETN 681
Cdd:pfam17825  638 SDAIHQGTNDEREMTFKHAALLHLLVTIRDVLLTCSLDTALGYLSNAKDIYKSILGSYLDDIWRQLEIVQFIREKNPETN 717
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  682 YKIQELQCQILSWMQSQQQIKVLIIIRMDSDGEKHFLIKILNKIEGLTLTVLHSNERKDFLESEGVLRGTSSCVVVHNQY 761
Cdd:pfam17825  718 YKIQELQCQILSWMQSEQQIKVLIIIRMDSDGEKHLLIKILNKIEGLTLTVLHSNKRKDFLESEGVLNGTSSCVVVHNQY 797
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  762 IGADFPWSNFSFVVEYNYVEDSCWTKHCKELNIPYMAFKVILPDTVLERSTLLDRFGGFLLEIQIPYVFFASEGLLNTPD 841
Cdd:pfam17825  798 IGADFPWSNFSFVVEYNYVENSCWTKHCKKLNIPYMAFKVILPDTVLKRSTLLDRFGGFLLEIQIPYVFFASEGLLNTPE 877
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  842 ILQLLESNYNISLVERGCSESLKLFGSSECYVVVTIDEHTAIILQDLEELNYEKASDNIIMRLMALSLQYRYCWIILYTK 921
Cdd:pfam17825  878 ILQLLESNYNITLVERCCSESLKLFGGTECYVVVTIDEHTAIILQDLEELNCEKASDNIIMRLMALSFQYSYCWIILYTK 957
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  922 ETLNSEYLLTEKTLHHLALIYAALVSFGLNSEELDVKLIIAPGVEATALIIRQIADHSLMTSKRDPHEWLDKSWLKVSPS 1001
Cdd:pfam17825  958 ETLNSEYHLTEKTLHHLALIYAALVSFGLKSEELDVKLIIAPGVEETALIIRQIADHNLMTSKRDPHEWLDKSWLEVSPS 1037
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626 1002 EEEMYLLDFPCINPLVAQLMLNKGPSLHWILLATLCQLQELLPEVPEKVLKHFCSITSLFKIGSSSITKSPQISSPQENR 1081
Cdd:pfam17825 1038 KEEMYLLDFPCINPLVAQLMLNKGPSLHWILLATLCQLQELLPEVPEKVLKHFCSITSLFKISSSSITKSPQISSPQENG 1117
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626 1082 NQISTLSSQSSASDLDSVIQEHNEYYQYLGLGETVQEDKTTILNDNSSIMELKEISSFLPPVTSYNQTSYWKDSSCKSNI 1161
Cdd:pfam17825 1118 NQTSTFISQSSASGSDSVIQEHNEYYQYSDLGETVQEDTNTTSNDNSSLMELREMPCVLPPVTSYSQTSYWKDSSCNPNI 1197
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626 1162 GQNTPFLINIESRRPAYNSFLNHSDSESDVFSLGLTQMNCETIKSPTDTQKRVSvvPRFINSQKRRTHEAKGFINKDVSD 1241
Cdd:pfam17825 1198 VQNNPFLINIESRKVAGNSFLNQNDSESDVFSLGLTQMNCETIISPIDTQRRVA--PNFINYQKKGTHEAKGPINKEVSA 1275
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626 1242 PIFSLEGTQSPLHWNFKKNIWEQENHPFNLQYGAQQTACNKLYSQKGNLFTDQQKCLSDESEGLTCESSKD---ETFWRE 1318
Cdd:pfam17825 1276 PVFSLEGSQSPLHWNFKKNVWEQQNHSFNLQYGAEQTTCDKWYSQKDNLFTNQQKCLSDELEGLTYESSNAgtkETFWRE 1355
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626 1319 LPSVPSLDLFRASDSNANQKEFNSLYFYQRAGKSLGQKRHHESSFNSGDKESLTGFMCSQLPQFKKRRLAYEKVPGRVDG 1398
Cdd:pfam17825 1356 LPSVPSLDLFCASDSNVNQKEFNSLYFYQRAGKCLGQKRHLESSSNSGDKKSLTDLMCSQLPQFKKRRLVYEKVPGRADG 1435

                   ....*..
gi 1677537626 1399 QTRLRFF 1405
Cdd:pfam17825 1436 QTRLRFF 1442
 
Name Accession Description Interval E-value
DUF5587 pfam17825
Family of unknown function (DUF5587); This is a family of unknown function found in chordata.
46-1405 0e+00

Family of unknown function (DUF5587); This is a family of unknown function found in chordata.


Pssm-ID: 465523  Cd Length: 1442  Bit Score: 2631.14  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626   46 LFIDDKGILFVSS----RKHLPTLPTLLSRLKLFLVKDPLLDFKGQIFTEANFSRECFSLQETLEAFVKEDFCMDKVNFC 121
Cdd:pfam17825   85 LFIDDEEIIFVNNlatyKSHLPTLNTLLSRLKLFLIKDPLLDFKEQIFTEANFFREYFSFQEDLEPFVKEDFYMDKENFC 164
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  122 QEKLEdticlNEPSSFLIEYEFLIPPSLKPEIDIPSLSELKELLNPVPEIINYVDEKEKLFERDLTNKHGIeDIGDIKFS 201
Cdd:pfam17825  165 QEKLE-----NETPSFLSECEFLISTSLKQEIDIPSPSELKESLNLVPEIINYVDENEKLFKRDLTTKHGI-DIEDIKCS 238
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  202 STEILTIQSQSEPEeCSKPGELEMPLTPLFLTCQHSSVNSLRTELQTFPLSPVCKINLLTAEESANEYYMMWQLERCRSP 281
Cdd:pfam17825  239 STEILAIQSQCEPE-CSEPGELEMPLTPLHLTNQHSSVNSLCTGLQTFPFSPVCKINLLTAEESANKYCMVWQLESCRSS 317
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  282 LNPFLLTVPRIQEPHSQYSVTDLKKIFSVKEESLVINLEKAEWWKQAGLNLKMMETLEHLNTYLCHDNLSSNDTKIEIFL 361
Cdd:pfam17825  318 LNSFLLTVPRTQEPNSQYSVTDLKKIFSIKEESLVINPVKAEWWKQAGLNLIMTETLEHLNTYLCHDDLSSDDTKMEIFL 397
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  362 PTKVLQLESCLEHKSHSSPIALIDEKSTNAHLSLPQKSPSLAKEVPDLCFSDDYFSDKGAAKEEKPKNDQEPVNRIIQKK 441
Cdd:pfam17825  398 PTKVLQLESWLEHKSCSSPIVLINEKSTNDHLLLPQKSPSPAKEVPDLCFSDEYISVKKPKKEEKPKNDQEPVARIIQKK 477
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  442 ENNDHFELDCTGPSIKSPSSSIIKKASFEHGKKQENDLDLLSDFIMLRNKYKTCTSKTEVTNSDEKHDKEACSLTLQEES 521
Cdd:pfam17825  478 ENNDCLELDCTVPSIESSSSSKIEKASFKHGKKQENDLDLLSDFIMLRNKYKTCTSKTEVTDSDEKNDKEEYSLTLQEES 557
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  522 PIVHINKTLEEINQERGTDSVIEIQASDSQCQAFCLLEAAASPILKNLVSLCTLPTANWKFATVIFDQTRFLLKEQEKVV 601
Cdd:pfam17825  558 PVVSTNKTLEKINQERRADNVIEIQASDSQCQAYCLLEAAATPILKKLVCLCTLPAANWKFATVIFDQTRFFLKEQEKVI 637
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  602 SDAVRQGTIDEREMTFKHAALLHLLVTIRDVLLTCSLDTALGYLSKAKDIYNSILGPYLGDIWRQLEIVQFIRGKKPETN 681
Cdd:pfam17825  638 SDAIHQGTNDEREMTFKHAALLHLLVTIRDVLLTCSLDTALGYLSNAKDIYKSILGSYLDDIWRQLEIVQFIREKNPETN 717
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  682 YKIQELQCQILSWMQSQQQIKVLIIIRMDSDGEKHFLIKILNKIEGLTLTVLHSNERKDFLESEGVLRGTSSCVVVHNQY 761
Cdd:pfam17825  718 YKIQELQCQILSWMQSEQQIKVLIIIRMDSDGEKHLLIKILNKIEGLTLTVLHSNKRKDFLESEGVLNGTSSCVVVHNQY 797
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  762 IGADFPWSNFSFVVEYNYVEDSCWTKHCKELNIPYMAFKVILPDTVLERSTLLDRFGGFLLEIQIPYVFFASEGLLNTPD 841
Cdd:pfam17825  798 IGADFPWSNFSFVVEYNYVENSCWTKHCKKLNIPYMAFKVILPDTVLKRSTLLDRFGGFLLEIQIPYVFFASEGLLNTPE 877
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  842 ILQLLESNYNISLVERGCSESLKLFGSSECYVVVTIDEHTAIILQDLEELNYEKASDNIIMRLMALSLQYRYCWIILYTK 921
Cdd:pfam17825  878 ILQLLESNYNITLVERCCSESLKLFGGTECYVVVTIDEHTAIILQDLEELNCEKASDNIIMRLMALSFQYSYCWIILYTK 957
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626  922 ETLNSEYLLTEKTLHHLALIYAALVSFGLNSEELDVKLIIAPGVEATALIIRQIADHSLMTSKRDPHEWLDKSWLKVSPS 1001
Cdd:pfam17825  958 ETLNSEYHLTEKTLHHLALIYAALVSFGLKSEELDVKLIIAPGVEETALIIRQIADHNLMTSKRDPHEWLDKSWLEVSPS 1037
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626 1002 EEEMYLLDFPCINPLVAQLMLNKGPSLHWILLATLCQLQELLPEVPEKVLKHFCSITSLFKIGSSSITKSPQISSPQENR 1081
Cdd:pfam17825 1038 KEEMYLLDFPCINPLVAQLMLNKGPSLHWILLATLCQLQELLPEVPEKVLKHFCSITSLFKISSSSITKSPQISSPQENG 1117
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626 1082 NQISTLSSQSSASDLDSVIQEHNEYYQYLGLGETVQEDKTTILNDNSSIMELKEISSFLPPVTSYNQTSYWKDSSCKSNI 1161
Cdd:pfam17825 1118 NQTSTFISQSSASGSDSVIQEHNEYYQYSDLGETVQEDTNTTSNDNSSLMELREMPCVLPPVTSYSQTSYWKDSSCNPNI 1197
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626 1162 GQNTPFLINIESRRPAYNSFLNHSDSESDVFSLGLTQMNCETIKSPTDTQKRVSvvPRFINSQKRRTHEAKGFINKDVSD 1241
Cdd:pfam17825 1198 VQNNPFLINIESRKVAGNSFLNQNDSESDVFSLGLTQMNCETIISPIDTQRRVA--PNFINYQKKGTHEAKGPINKEVSA 1275
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626 1242 PIFSLEGTQSPLHWNFKKNIWEQENHPFNLQYGAQQTACNKLYSQKGNLFTDQQKCLSDESEGLTCESSKD---ETFWRE 1318
Cdd:pfam17825 1276 PVFSLEGSQSPLHWNFKKNVWEQQNHSFNLQYGAEQTTCDKWYSQKDNLFTNQQKCLSDELEGLTYESSNAgtkETFWRE 1355
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1677537626 1319 LPSVPSLDLFRASDSNANQKEFNSLYFYQRAGKSLGQKRHHESSFNSGDKESLTGFMCSQLPQFKKRRLAYEKVPGRVDG 1398
Cdd:pfam17825 1356 LPSVPSLDLFCASDSNVNQKEFNSLYFYQRAGKCLGQKRHLESSSNSGDKKSLTDLMCSQLPQFKKRRLVYEKVPGRADG 1435

                   ....*..
gi 1677537626 1399 QTRLRFF 1405
Cdd:pfam17825 1436 QTRLRFF 1442
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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