|
Name |
Accession |
Description |
Interval |
E-value |
| PL48 |
pfam15903 |
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific ... |
17-365 |
0e+00 |
|
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific HL-60 cell differentiation. The N-terminal part of the family is found to induce the formation of filopodia. It is found in vertebrates.
:
Pssm-ID: 464930 Cd Length: 297 Bit Score: 553.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 17 VSRSQSFAGVLGSHERgpRSFTVFSPPGPPRKPLvlSRVSRMFSVAH---PAPKVPQPERLDLVYTALKRGLTAYLEVHQ 93
Cdd:pfam15903 1 ITRSQSFAGFSSAQER--RNLSSFSRPSLRSKPP--SKSSRMFTSSHksgPPPKVPQPERVDRVYEALKKGLKEYLEVHQ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 94 QEQEKLQRQIKESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKidelyeaycvqrrlrdgaynmvraystgspgsrea 173
Cdd:pfam15903 77 AELDKLSRQQKDTKRNSRLGFLYDLDKQIKSVERYIRRLEFHISK----------------------------------- 121
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 174 rdslaeatrghreyteSMCLLENELEAQLGEFHLRMKGLAGFARLCVGDQYEICMKYGRQRWKLRGRIESSGKQVWDSEE 253
Cdd:pfam15903 122 ----------------DMCLLEGELENLLGEFHIKMKGLAGFARLCPGDQYEVLMRYGRQRWKLRGRIETDDKQVWDEEE 185
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 254 TVFLPLLTEFLSIKVTELKGLANHVVVGSVSCETKDLFAALPQVVAVDINDLGTIKLSLEVIWSPFDKDDQPSAASTVNK 333
Cdd:pfam15903 186 MVFLPLIHENFEIKVTELKGLANHVLVGSVTCETKDLFAARPQVVAVDINDLGTIKLQLEVTWNPFDKEDQLPSASSVSK 265
|
330 340 350
....*....|....*....|....*....|..
gi 145301546 334 ASTVTKRFSTYSQSPPDTPSLREQAFYNMLRR 365
Cdd:pfam15903 266 ASVVSRRGSVYSWTPPDTPSFREKYFLSMLRQ 297
|
|
| Herpes_BLLF1 super family |
cl37540 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
444-749 |
8.23e-11 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
The actual alignment was detected with superfamily member pfam05109:
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 66.48 E-value: 8.23e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 444 SRTLSHISEASVDAALTEAVEAVdSQSPIPGPSPLVYPDSTHVERVSSVLPVLNNGHSATSPALST---TGPAP------ 514
Cdd:pfam05109 406 TRTATNATTTTHKVIFSKAPEST-TTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTadvTSPTPagttsg 484
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 515 -TFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSPLtstgSVPNATdstq 593
Cdd:pfam05109 485 aSPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTT----PTPNAT---- 556
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 594 aTPSPTHSTPSPTHTTIRLTHTT-----VSPTHSSPSPIHTTPSPTHTTVSPTCTTPSSGHSTTSPTQEAkMSTHTTGAV 668
Cdd:pfam05109 557 -SPTPAVTTPTPNATIPTLGKTSptsavTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNA-TSAVTTGQH 634
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 669 GPVQTTTS-----PISTTESPSPSTdvaiissssaesTGPGTEPLPCSHPASPP----YTKADPTASCTSYQSLASSGSK 739
Cdd:pfam05109 635 NITSSSTSsmslrPSSISETLSPST------------SDNSTSHMPLLTSAHPTggenITQVTPASTSTHHVSTSSPAPR 702
|
330
....*....|
gi 145301546 740 PLTSPAPDSP 749
Cdd:pfam05109 703 PGTTSQASGP 712
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1069-1190 |
5.28e-07 |
|
HEAT repeat [General function prediction only];
:
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 50.01 E-value: 5.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 1069 LLVQNLNSDDQAVVLKALRLApeGRLR-KDGLRALSSLLVHGNNKVMAAVStqlrsLSLGPVFRERALLCFLDQLEDGDV 1147
Cdd:COG1413 20 ALIAALADEDPDVRAAAARAL--GRLGdPRAVPALLEALKDPDPEVRAAAA-----EALGRIGDPEAVPALIAALKDEDP 92
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 145301546 1148 QTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQ 1190
Cdd:COG1413 93 EVRRAAAEALGRLGDPAAVPALLEALKDPDWEVRRAAARALGR 135
|
|
| HR1 super family |
cl00087 |
Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small ... |
138-205 |
3.79e-04 |
|
Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases; The HR1 domain, also called the ACC (anti-parallel coiled-coil) finger domain or Rho-binding domain binds small GTPases from the Rho family. It is found in Rho effector proteins including PKC-related kinases such as vertebrate PRK1 (or PKN) and yeast PKC1 protein kinases C, as well as in rhophilins and Rho-associated kinase (ROCK). Rho family members function as molecular switches, cycling between inactive and active forms, controlling a variety of cellular processes. HR1 domains may occur in repeat arrangements (PKN contains three HR1 domains), separated by a short linker region.
The actual alignment was detected with superfamily member cd11636:
Pssm-ID: 469609 Cd Length: 74 Bit Score: 40.34 E-value: 3.79e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 145301546 138 KIDELYEAYCVQRRLRDGAYNMVRAYSTGSPGSREArdsLAEATRGHREYTESMCLLENELEAQLGEF 205
Cdd:cd11636 10 RIEELRHHFRVEHAVAEGAKNVLRLLGAGKAQDRKA---ISEAQSKLSESSQKLDLLRVSLEQRLVEL 74
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PL48 |
pfam15903 |
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific ... |
17-365 |
0e+00 |
|
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific HL-60 cell differentiation. The N-terminal part of the family is found to induce the formation of filopodia. It is found in vertebrates.
Pssm-ID: 464930 Cd Length: 297 Bit Score: 553.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 17 VSRSQSFAGVLGSHERgpRSFTVFSPPGPPRKPLvlSRVSRMFSVAH---PAPKVPQPERLDLVYTALKRGLTAYLEVHQ 93
Cdd:pfam15903 1 ITRSQSFAGFSSAQER--RNLSSFSRPSLRSKPP--SKSSRMFTSSHksgPPPKVPQPERVDRVYEALKKGLKEYLEVHQ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 94 QEQEKLQRQIKESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKidelyeaycvqrrlrdgaynmvraystgspgsrea 173
Cdd:pfam15903 77 AELDKLSRQQKDTKRNSRLGFLYDLDKQIKSVERYIRRLEFHISK----------------------------------- 121
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 174 rdslaeatrghreyteSMCLLENELEAQLGEFHLRMKGLAGFARLCVGDQYEICMKYGRQRWKLRGRIESSGKQVWDSEE 253
Cdd:pfam15903 122 ----------------DMCLLEGELENLLGEFHIKMKGLAGFARLCPGDQYEVLMRYGRQRWKLRGRIETDDKQVWDEEE 185
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 254 TVFLPLLTEFLSIKVTELKGLANHVVVGSVSCETKDLFAALPQVVAVDINDLGTIKLSLEVIWSPFDKDDQPSAASTVNK 333
Cdd:pfam15903 186 MVFLPLIHENFEIKVTELKGLANHVLVGSVTCETKDLFAARPQVVAVDINDLGTIKLQLEVTWNPFDKEDQLPSASSVSK 265
|
330 340 350
....*....|....*....|....*....|..
gi 145301546 334 ASTVTKRFSTYSQSPPDTPSLREQAFYNMLRR 365
Cdd:pfam15903 266 ASVVSRRGSVYSWTPPDTPSFREKYFLSMLRQ 297
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
444-749 |
8.23e-11 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 66.48 E-value: 8.23e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 444 SRTLSHISEASVDAALTEAVEAVdSQSPIPGPSPLVYPDSTHVERVSSVLPVLNNGHSATSPALST---TGPAP------ 514
Cdd:pfam05109 406 TRTATNATTTTHKVIFSKAPEST-TTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTadvTSPTPagttsg 484
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 515 -TFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSPLtstgSVPNATdstq 593
Cdd:pfam05109 485 aSPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTT----PTPNAT---- 556
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 594 aTPSPTHSTPSPTHTTIRLTHTT-----VSPTHSSPSPIHTTPSPTHTTVSPTCTTPSSGHSTTSPTQEAkMSTHTTGAV 668
Cdd:pfam05109 557 -SPTPAVTTPTPNATIPTLGKTSptsavTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNA-TSAVTTGQH 634
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 669 GPVQTTTS-----PISTTESPSPSTdvaiissssaesTGPGTEPLPCSHPASPP----YTKADPTASCTSYQSLASSGSK 739
Cdd:pfam05109 635 NITSSSTSsmslrPSSISETLSPST------------SDNSTSHMPLLTSAHPTggenITQVTPASTSTHHVSTSSPAPR 702
|
330
....*....|
gi 145301546 740 PLTSPAPDSP 749
Cdd:pfam05109 703 PGTTSQASGP 712
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1069-1190 |
5.28e-07 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 50.01 E-value: 5.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 1069 LLVQNLNSDDQAVVLKALRLApeGRLR-KDGLRALSSLLVHGNNKVMAAVStqlrsLSLGPVFRERALLCFLDQLEDGDV 1147
Cdd:COG1413 20 ALIAALADEDPDVRAAAARAL--GRLGdPRAVPALLEALKDPDPEVRAAAA-----EALGRIGDPEAVPALIAALKDEDP 92
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 145301546 1148 QTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQ 1190
Cdd:COG1413 93 EVRRAAAEALGRLGDPAAVPALLEALKDPDWEVRRAAARALGR 135
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
499-709 |
1.75e-06 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 52.06 E-value: 1.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 499 GHSATSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSP 578
Cdd:COG3469 8 ASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 579 LTSTGSVPNATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPTHSSPSPIHTTPSpthttVSPTCTTPSSGHSTTSPTQEA 658
Cdd:COG3469 88 AATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASAT-----SSAGSTTTTTTVSGTETATGG 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 145301546 659 KMSTHTTGAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLP 709
Cdd:COG3469 163 TTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLP 213
|
|
| HR1_PKN1_3 |
cd11636 |
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein ... |
138-205 |
3.79e-04 |
|
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N1; PKN1, also called PKNalpha or Protein-kinase C-related kinase 1 (PRK1), is a serine/threonine protein kinase that is activated by the Rho family of small GTPases, and by fatty acids such as arachidonic and linoleic acids. It is expressed ubiquitously and is the most abundant PKN isoform in neurons. PKN1 is implicated in a variety of functions including cytoskeletal reorganization, cardiac cell survival, cell adhesion, and glucose transport, among others. PKN1 contains three HR1 domains, a C2 domain, and a kinase domain. This model characterizes the third HR1 domain of PKN1. HR1 domains are anti-parallel coiled-coil (ACC) domains that bind small GTPases from the Rho family; PKN1 binds the GTPases RhoA, RhoB, and RhoC, and can also interact weakly with Rac.
Pssm-ID: 212026 Cd Length: 74 Bit Score: 40.34 E-value: 3.79e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 145301546 138 KIDELYEAYCVQRRLRDGAYNMVRAYSTGSPGSREArdsLAEATRGHREYTESMCLLENELEAQLGEF 205
Cdd:cd11636 10 RIEELRHHFRVEHAVAEGAKNVLRLLGAGKAQDRKA---ISEAQSKLSESSQKLDLLRVSLEQRLVEL 74
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
641-743 |
5.68e-04 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 42.97 E-value: 5.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 641 TCTTPSSGhSTTSPTQEAKMSTHTTGAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLPCSHPASPPYTK 720
Cdd:PHA03255 25 TSSGSSTA-SAGNVTGTTAVTTPSPSASGPSTNQSTTLTTTSAPITTTAILSTNTTTVTSTGTTVTPVPTTSNASTINVT 103
|
90 100
....*....|....*....|...
gi 145301546 721 ADPTASCTSYQSLASSGSKPLTS 743
Cdd:PHA03255 104 TKVTAQNITATEAGTGTSTGVTS 126
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
1099-1189 |
6.54e-04 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 40.01 E-value: 6.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 1099 LRALSSLLVHGNNKVMAAVSTQlrslSLGPVFRERALLCFLDQLEDGDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTE 1178
Cdd:pfam13646 1 LPALLQALLRDPDPEVRAAAIR----ALGRIGDPEAVPALLELLKDEDPAVRRAAAEALGKIGDPEALPALLELLRDDDD 76
|
90
....*....|..
gi 145301546 1179 A-VREAARQSLQ 1189
Cdd:pfam13646 77 DvVRAAAAEALA 88
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PL48 |
pfam15903 |
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific ... |
17-365 |
0e+00 |
|
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific HL-60 cell differentiation. The N-terminal part of the family is found to induce the formation of filopodia. It is found in vertebrates.
Pssm-ID: 464930 Cd Length: 297 Bit Score: 553.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 17 VSRSQSFAGVLGSHERgpRSFTVFSPPGPPRKPLvlSRVSRMFSVAH---PAPKVPQPERLDLVYTALKRGLTAYLEVHQ 93
Cdd:pfam15903 1 ITRSQSFAGFSSAQER--RNLSSFSRPSLRSKPP--SKSSRMFTSSHksgPPPKVPQPERVDRVYEALKKGLKEYLEVHQ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 94 QEQEKLQRQIKESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKidelyeaycvqrrlrdgaynmvraystgspgsrea 173
Cdd:pfam15903 77 AELDKLSRQQKDTKRNSRLGFLYDLDKQIKSVERYIRRLEFHISK----------------------------------- 121
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 174 rdslaeatrghreyteSMCLLENELEAQLGEFHLRMKGLAGFARLCVGDQYEICMKYGRQRWKLRGRIESSGKQVWDSEE 253
Cdd:pfam15903 122 ----------------DMCLLEGELENLLGEFHIKMKGLAGFARLCPGDQYEVLMRYGRQRWKLRGRIETDDKQVWDEEE 185
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 254 TVFLPLLTEFLSIKVTELKGLANHVVVGSVSCETKDLFAALPQVVAVDINDLGTIKLSLEVIWSPFDKDDQPSAASTVNK 333
Cdd:pfam15903 186 MVFLPLIHENFEIKVTELKGLANHVLVGSVTCETKDLFAARPQVVAVDINDLGTIKLQLEVTWNPFDKEDQLPSASSVSK 265
|
330 340 350
....*....|....*....|....*....|..
gi 145301546 334 ASTVTKRFSTYSQSPPDTPSLREQAFYNMLRR 365
Cdd:pfam15903 266 ASVVSRRGSVYSWTPPDTPSFREKYFLSMLRQ 297
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
444-749 |
8.23e-11 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 66.48 E-value: 8.23e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 444 SRTLSHISEASVDAALTEAVEAVdSQSPIPGPSPLVYPDSTHVERVSSVLPVLNNGHSATSPALST---TGPAP------ 514
Cdd:pfam05109 406 TRTATNATTTTHKVIFSKAPEST-TTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTadvTSPTPagttsg 484
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 515 -TFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSPLtstgSVPNATdstq 593
Cdd:pfam05109 485 aSPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTT----PTPNAT---- 556
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 594 aTPSPTHSTPSPTHTTIRLTHTT-----VSPTHSSPSPIHTTPSPTHTTVSPTCTTPSSGHSTTSPTQEAkMSTHTTGAV 668
Cdd:pfam05109 557 -SPTPAVTTPTPNATIPTLGKTSptsavTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNA-TSAVTTGQH 634
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 669 GPVQTTTS-----PISTTESPSPSTdvaiissssaesTGPGTEPLPCSHPASPP----YTKADPTASCTSYQSLASSGSK 739
Cdd:pfam05109 635 NITSSSTSsmslrPSSISETLSPST------------SDNSTSHMPLLTSAHPTggenITQVTPASTSTHHVSTSSPAPR 702
|
330
....*....|
gi 145301546 740 PLTSPAPDSP 749
Cdd:pfam05109 703 PGTTSQASGP 712
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1069-1190 |
5.28e-07 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 50.01 E-value: 5.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 1069 LLVQNLNSDDQAVVLKALRLApeGRLR-KDGLRALSSLLVHGNNKVMAAVStqlrsLSLGPVFRERALLCFLDQLEDGDV 1147
Cdd:COG1413 20 ALIAALADEDPDVRAAAARAL--GRLGdPRAVPALLEALKDPDPEVRAAAA-----EALGRIGDPEAVPALIAALKDEDP 92
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 145301546 1148 QTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQ 1190
Cdd:COG1413 93 EVRRAAAEALGRLGDPAAVPALLEALKDPDWEVRRAAARALGR 135
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
499-709 |
1.75e-06 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 52.06 E-value: 1.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 499 GHSATSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSP 578
Cdd:COG3469 8 ASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 579 LTSTGSVPNATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPTHSSPSPIHTTPSpthttVSPTCTTPSSGHSTTSPTQEA 658
Cdd:COG3469 88 AATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASAT-----SSAGSTTTTTTVSGTETATGG 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 145301546 659 KMSTHTTGAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLP 709
Cdd:COG3469 163 TTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLP 213
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1092-1207 |
2.44e-06 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 48.09 E-value: 2.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 1092 GRLR-KDGLRALSSLLVHGNNKV-MAAVStqlrslSLGPVFRERALLCFLDQLEDGDVQTRVAGCLALGCIKAPEGIEPL 1169
Cdd:COG1413 10 GRLGdPAAVPALIAALADEDPDVrAAAAR------ALGRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGDPEAVPAL 83
|
90 100 110
....*....|....*....|....*....|....*...
gi 145301546 1170 VYLCQTDTEAVREAARQSLQQCGEEgqSAHRQLEESLD 1207
Cdd:COG1413 84 IAALKDEDPEVRRAAAEALGRLGDP--AAVPALLEALK 119
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
440-751 |
3.67e-06 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 51.11 E-value: 3.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 440 HAPYSRTLSH--ISEASVDAALTEAVEAVDSQSPIPG----PSPLVYPDSTHVERVSSVLPVLNNghSATSPALSTTGPA 513
Cdd:pfam17823 90 HTPHGTDLSEpaTREGAADGAASRALAAAASSSPSSAaqslPAAIAALPSEAFSAPRAAACRANA--SAAPRAAIAAASA 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 514 PTFIDPAPTTQldlvhKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSPLTSTGS---VPNATD 590
Cdd:pfam17823 168 PHAASPAPRTA-----ASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNsspAAGTVT 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 591 STQATPSP----THSTPSPTHTTIRLTHTTVSPTHSSPSPIHTtpspthttvSPTCTTPSSGHSTTSPTQEAKMSTHTTG 666
Cdd:pfam17823 243 AAVGTVTPaalaTLAAAAGTVASAAGTINMGDPHARRLSPAKH---------MPSDTMARNPAAPMGAQAQGPIIQVSTD 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 667 AvgPVQTTT-----SPISTTESPSPSTDVAIISSSSAESTGPGTEPlPCSHPASPPYTKADPTASCTSyqslassgskPL 741
Cdd:pfam17823 314 Q--PVHNTAgeptpSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKE-PSASPVPVLHTSMIPEVEATS----------PT 380
|
330
....*....|
gi 145301546 742 TSPAPDSPEQ 751
Cdd:pfam17823 381 TQPSPLLPTQ 390
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
447-690 |
1.13e-05 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 49.37 E-value: 1.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 447 LSHISEASVDAALTEAVEAVDSQSPIPGPSPLVYPDSTHVErVSSVLPVLNNGHSATSPALSTTGPAPTfidpAPTTQLD 526
Cdd:COG3469 1 SSSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATT-VVSTTGSVVVAASGSAGSGTGTTAASS----TAATSST 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 527 LVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAhtttpspLTSTGSVPNATDSTQATPSPTHSTPSPT 606
Cdd:COG3469 76 TSTTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAG-------SVTSTTSSTAGSTTTSGASATSSAGSTT 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 607 HTTIRLTHTTVSPThsspspihttpspthTTVSPTCTTPSSGHSTTSPTqeakmSTHTTGAVGPVQTTTSPISTTESPSP 686
Cdd:COG3469 149 TTTTVSGTETATGG---------------TTTTSTTTTTTSASTTPSAT-----TTATATTASGATTPSATTTATTTGPP 208
|
....
gi 145301546 687 STDV 690
Cdd:COG3469 209 TPGL 212
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
502-783 |
4.78e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 47.65 E-value: 4.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 502 ATSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAP--------SELPSITHTTTSSAYSAV-----SLVNSVPSLTSTTI 568
Cdd:pfam17823 66 APAPVTLTKGTSAAHLNSTEVTAEHTPHGTDLSEPatregaadGAASRALAAAASSSPSSAaqslpAAIAALPSEAFSAP 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 569 GSAHTTTPSPLTSTGSVPNATDSTQATPSPTHSTPSPT--HTTIRLTHTTVSPTHSSPS---PIHTTPSPTHTTVSPTCT 643
Cdd:pfam17823 146 RAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTaaSSTTAASSAPTTAASSAPAtltPARGISTAATATGHPAAG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 644 TPSS--GHSTTSP-TQEAKMSTHTTGAVGPVQT-------------TTSPISTTESPSPSTDVAIISSSSAESTGPGTEp 707
Cdd:pfam17823 226 TALAavGNSSPAAgTVTAAVGTVTPAALATLAAaagtvasaagtinMGDPHARRLSPAKHMPSDTMARNPAAPMGAQAQ- 304
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 145301546 708 lpcshpasppytkaDPTASCTSYQSLASSGSKPLTSPAPDSPEQIPKSPSSSPSSSAPEPQHSEHNLAAVAQAPVP 783
Cdd:pfam17823 305 --------------GPIIQVSTDQPVHNTAGEPTPSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASPVPVL 366
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
393-688 |
6.68e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 46.88 E-value: 6.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 393 TARHSTPKPLVQQpepLPVQVAfrRPESLTSGSMDEEPAMTPSLVNGHAPYSRTLShiSEASVDAALTEAVEAVDSQSPI 472
Cdd:pfam17823 117 AAASSSPSSAAQS---LPAAIA--ALPSEAFSAPRAAACRANASAAPRAAIAAASA--PHAASPAPRTAASSTTAASSTT 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 473 PGPSPLVYPDSTHVERVSSVLPVLNNGHSATSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSA-- 550
Cdd:pfam17823 190 AASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAgt 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 551 YSAVSLVNSVPSLTSTTigSAHTTTPSPLTSTGSVPNATDSTQATPSPTHST-PSPTHTTIRLTHTTVSPTHSSPSPIHT 629
Cdd:pfam17823 270 INMGDPHARRLSPAKHM--PSDTMARNPAAPMGAQAQGPIIQVSTDQPVHNTaGEPTPSPSNTTLEPNTPKSVASTNLAV 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 145301546 630 TPSPTHTTVSPTCTTPSSGHST-------TSPTQEAKMSTHTTGAVGP--------VQTTTSPISTTESPSPST 688
Cdd:pfam17823 348 VTTTKAQAKEPSASPVPVLHTSmipeveaTSPTTQPSPLLPTQGAAGPgillapeqVATEATAGTASAGPTPRS 421
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1125-1194 |
7.24e-05 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 43.85 E-value: 7.24e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 1125 SLGPVFRERALLCFLDQLEDGDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQCGEE 1194
Cdd:COG1413 8 ALGRLGDPAAVPALIAALADEDPDVRAAAARALGRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGDP 77
|
|
| HR1_PKN1_3 |
cd11636 |
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein ... |
138-205 |
3.79e-04 |
|
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N1; PKN1, also called PKNalpha or Protein-kinase C-related kinase 1 (PRK1), is a serine/threonine protein kinase that is activated by the Rho family of small GTPases, and by fatty acids such as arachidonic and linoleic acids. It is expressed ubiquitously and is the most abundant PKN isoform in neurons. PKN1 is implicated in a variety of functions including cytoskeletal reorganization, cardiac cell survival, cell adhesion, and glucose transport, among others. PKN1 contains three HR1 domains, a C2 domain, and a kinase domain. This model characterizes the third HR1 domain of PKN1. HR1 domains are anti-parallel coiled-coil (ACC) domains that bind small GTPases from the Rho family; PKN1 binds the GTPases RhoA, RhoB, and RhoC, and can also interact weakly with Rac.
Pssm-ID: 212026 Cd Length: 74 Bit Score: 40.34 E-value: 3.79e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 145301546 138 KIDELYEAYCVQRRLRDGAYNMVRAYSTGSPGSREArdsLAEATRGHREYTESMCLLENELEAQLGEF 205
Cdd:cd11636 10 RIEELRHHFRVEHAVAEGAKNVLRLLGAGKAQDRKA---ISEAQSKLSESSQKLDLLRVSLEQRLVEL 74
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
641-743 |
5.68e-04 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 42.97 E-value: 5.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 641 TCTTPSSGhSTTSPTQEAKMSTHTTGAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLPCSHPASPPYTK 720
Cdd:PHA03255 25 TSSGSSTA-SAGNVTGTTAVTTPSPSASGPSTNQSTTLTTTSAPITTTAILSTNTTTVTSTGTTVTPVPTTSNASTINVT 103
|
90 100
....*....|....*....|...
gi 145301546 721 ADPTASCTSYQSLASSGSKPLTS 743
Cdd:PHA03255 104 TKVTAQNITATEAGTGTSTGVTS 126
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
1099-1189 |
6.54e-04 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 40.01 E-value: 6.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 1099 LRALSSLLVHGNNKVMAAVSTQlrslSLGPVFRERALLCFLDQLEDGDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTE 1178
Cdd:pfam13646 1 LPALLQALLRDPDPEVRAAAIR----ALGRIGDPEAVPALLELLKDEDPAVRRAAAEALGKIGDPEALPALLELLRDDDD 76
|
90
....*....|..
gi 145301546 1179 A-VREAARQSLQ 1189
Cdd:pfam13646 77 DvVRAAAAEALA 88
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
399-784 |
1.22e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 43.22 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 399 PKPLVQQPEPLPVQVAFRRPESLTSGSMDEEPAM-------------TPSLVNGHAPYSRTLShiSEASVDAALTEAvea 465
Cdd:pfam03154 65 SSKKIKEEAPSPLKSAKRQREKGASDTEEPERATakksktqeisrpnSPSEGEGESSDGRSVN--DEGSSDPKDIDQ--- 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 466 vDSQSPIPG-PSPL---VYPDSTHVERVSSVLPVLNNGHSATSPALSTTGPAPTFI-DPAPTTQLDLVHKTTDSAPSELP 540
Cdd:pfam03154 140 -DNRSTSPSiPSPQdneSDSDSSAQQQILQTQPPVLQAQSGAASPPSPPPPGTTQAaTAGPTPSAPSVPPQGSPATSQPP 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 541 SITHTTTSSaysaVSLVNSVPSLTSTTIGSAHTTTPSPLTSTgsvPNATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPT 620
Cdd:pfam03154 219 NQTQSTAAP----HTLIQQTPTLHPQRLPSPHPPLQPMTQPP---PPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQH 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 621 HSSPSPIHTTPSPTHTTVSPTCTTPSSGHSTTSPTQEAKMSTHTTGAVGPVQT--------------TTSPISTTESPSP 686
Cdd:pfam03154 292 PVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQPlppaplsmphikppPTTPIPQLPNPQS 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 687 STDVAIISSSSAESTGPGTEPLPCSHPASPPYTKADPTASCTSYQSLasSGSKPLTSPaPDSPEQIPKSPSSSPSSSAPE 766
Cdd:pfam03154 372 HKHPPHLSGPSPFQMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLM--PQSQQLPPP-PAQPPVLTQSQSLPPPAASHP 448
|
410
....*....|....*...
gi 145301546 767 PQHSEHNLAavAQAPVPE 784
Cdd:pfam03154 449 PTSGLHQVP--SQSPFPQ 464
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
413-750 |
3.34e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.70 E-value: 3.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 413 VAFRRPESLTSGSMDEEPAMTPSLVNGHAPYSRTLSHISEASVDAALTEAVEAVDSQSPIPGPSPLVYPDSTHVERVSSV 492
Cdd:PHA03307 55 VVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 493 LPVLNNGHSATSPALSTTGPAPtfiDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSlVNSVPSLTSTTIGSAH 572
Cdd:PHA03307 135 SEMLRPVGSPGPPPAASPPAAG---ASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPP-PSTPPAAASPRPPRRS 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 573 TTTPSPLTSTGSVP--NATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPTHSSPSPIHTTPSPTHTTVSPTCTTPSSGHS 650
Cdd:PHA03307 211 SPISASASSPAPAPgrSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 651 TTSPTQEAKMSThttgAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLP-CSHPASPPYTKADPTASCTS 729
Cdd:PHA03307 291 PRERSPSPSPSS----PGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPsPSRSPSPSRPPPPADPSSPR 366
|
330 340
....*....|....*....|.
gi 145301546 730 yQSLASSGSKPLTSPAPDSPE 750
Cdd:PHA03307 367 -KRPRPSRAPSSPAASAGRPT 386
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
599-751 |
3.59e-03 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 40.66 E-value: 3.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 599 THSTPSPTHTTIRLTHTTVS-PTHSSPSPIHTTPSPTHTTVSPTCTTPSSGHSTTSPTqeakmsthTTGAVGPVQTTTSP 677
Cdd:PHA03255 25 TSSGSSTASAGNVTGTTAVTtPSPSASGPSTNQSTTLTTTSAPITTTAILSTNTTTVT--------STGTTVTPVPTTSN 96
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 145301546 678 ISTtesPSPSTDVAIISSSSAEsTGPGTEPLPCSHPAsppyTKADPTASCTSYQSLASSGSKPLTSPAPDSPEQ 751
Cdd:PHA03255 97 AST---INVTTKVTAQNITATE-AGTGTSTGVTSNVT----TRSSSTTSATTRITNATTLAPTLSSKGTSNATK 162
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
457-654 |
3.71e-03 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 41.28 E-value: 3.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 457 AALTEAVEAVDSQSPIPGPSPLVYPDSTHVERVSSVLPVLNNGHSATSPALSTTGPAPTFIDPAPTTqldlvhkTTDSAP 536
Cdd:COG3469 30 ASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATSTSATL-------VATSTA 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 537 SELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSPLTSTGSVPNATDSTQATPSPTHSTPSPTHTTirlthtT 616
Cdd:COG3469 103 SGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGTTTTSTTTTTTSA------S 176
|
170 180 190
....*....|....*....|....*....|....*...
gi 145301546 617 VSPTHSSPSPIHTTPSPTHTTVSPTcTTPSSGHSTTSP 654
Cdd:COG3469 177 TTPSATTTATATTASGATTPSATTT-ATTTGPPTPGLP 213
|
|
| Metaviral_G |
pfam09595 |
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. ... |
587-735 |
3.73e-03 |
|
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. It is high in serine and threonine suggesting it is highly glycosylated.
Pssm-ID: 462833 [Multi-domain] Cd Length: 183 Bit Score: 39.94 E-value: 3.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 587 NATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPTHSSPSPiHTTPSPTHTTVSPTCTTPSSGHSTTSPTQEAKMSTHTTG 666
Cdd:pfam09595 46 IITDIIDININKQHPEQEHHENPPLNEAAKEAPSESEDAP-DIDPNNQHPSQDRSEAPPLEPAAKTKPSEHEPANPPDAS 124
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 145301546 667 AvgpvqTTTSPISTTESPSPSTdvaiisSSSAESTGPGTEPLPCSHPASPPYTKADPTASCTSYQSLAS 735
Cdd:pfam09595 125 N-----RLSPPDASTAAIREAR------TFRKPSTGKRNNPSSAQSDQSPPRANHEAIGRANPFAMSST 182
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
503-688 |
4.83e-03 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 40.27 E-value: 4.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 503 TSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAysavslvnsvpsLTSTTIGSAHTTTPSPLtst 582
Cdd:PHA03255 20 TSLIWTSSGSSTASAGNVTGTTAVTTPSPSASGPSTNQSTTLTTTSAP------------ITTTAILSTNTTTVTST--- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145301546 583 gsvpnatdSTQATPSPTHSTPSPTHTTIRLTHTTVSPThsspspihttpspthttvsptcttpSSGHSTTSPTQE--AKM 660
Cdd:PHA03255 85 --------GTTVTPVPTTSNASTINVTTKVTAQNITAT-------------------------EAGTGTSTGVTSnvTTR 131
|
170 180
....*....|....*....|....*...
gi 145301546 661 STHTTGAvgpvqTTTSPISTTESPSPST 688
Cdd:PHA03255 132 SSSTTSA-----TTRITNATTLAPTLSS 154
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
1142-1207 |
5.36e-03 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 37.32 E-value: 5.36e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 145301546 1142 LEDGDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQCGEEGQSAHrqLEESLD 1207
Cdd:pfam13646 9 LRDPDPEVRAAAIRALGRIGDPEAVPALLELLKDEDPAVRRAAAEALGKIGDPEALPA--LLELLR 72
|
|
| |
