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Conserved domains on  [gi|145330691|ref|NP_001078021|]
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jacalin-related lectin 22 [Arabidopsis thaliana]

Protein Classification

jacalin family lectin; zinc metalloproteinase family protein( domain architecture ID 10477402)

jacalin family lectin is a sugar-binding protein containing a jacalin domain| zinc metalloproteinase family protein contains an HEXXH motif characteristic of metallopeptidases; contains a Jacalin-like lectin domain that may bind mono- or oligosaccharides

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 292-423 7.04e-55

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


:

Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 178.24  E-value: 7.04e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691  292 GVTWDDGVYDGVRKILVGQGNDGVSFVKFEYSKGKDLVPGDDHGKKTLLGAEEFVLEDG-EYLMNIDGYYDKIFGVEEPI 370
Cdd:pfam01419   1 GASWDDGVYDGVRKVYVGQGGDGITYIKFEYVKGGGKVEGDEHGKKGLLGPEEFEIDYPdEYITSVEGTYDKVFGSDSEV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 145330691  371 IVCLQFKTNKRE-SMPFGMDSGKKFSLGEEGHKIVGFHGQASDVVHSIGVTIVP 423
Cdd:pfam01419  81 ITSLTFKTNKGRtSPFFGTPSGTKFSLEVKGKKIVGFHGRAGNALNALGAYFAP 134
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 141-271 1.22e-49

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


:

Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 164.76  E-value: 1.22e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691  141 GRVWDDGSYDGIKTLRIDQDNSRITYLEVEYEK-DGEAKTCNHGGKGDT-PSEFVLGYPDEYIKSVEATYQKPNIFSNTA 218
Cdd:pfam01419   1 GASWDDGVYDGVRKVYVGQGGDGITYIKFEYVKgGGKVEGDEHGKKGLLgPEEFEIDYPDEYITSVEGTYDKVFGSDSEV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 145330691  219 ITSLKFLTSKGRTS-FFGYNVGKKFVLEQKGHRLVGFHGKEDAAIDALGAYFGP 271
Cdd:pfam01419  81 ITSLTFKTNKGRTSpFFGTPSGTKFSLEVKGKKIVGFHGRAGNALNALGAYFAP 134
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 16-122 2.53e-38

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


:

Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 135.10  E-value: 2.53e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691   16 GQEWDDDVYEGVRKVYVGQDLNRITYIKFEYVQEDGEVVTTEYGT-TNQHPKEFVIQYPDEHIIAVEGSYHQVALIATEV 94
Cdd:pfam01419   1 GASWDDGVYDGVRKVYVGQGGDGITYIKFEYVKGGGKVEGDEHGKkGLLGPEEFEIDYPDEYITSVEGTYDKVFGSDSEV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 145330691   95 ITSLVFKTSK-------------------------GFHGRAGDAVDALGVYFV 122
Cdd:pfam01419  81 ITSLTFKTNKgrtspffgtpsgtkfslevkgkkivGFHGRAGNALNALGAYFA 133
 
Name Accession Description Interval E-value
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 292-423 7.04e-55

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 178.24  E-value: 7.04e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691  292 GVTWDDGVYDGVRKILVGQGNDGVSFVKFEYSKGKDLVPGDDHGKKTLLGAEEFVLEDG-EYLMNIDGYYDKIFGVEEPI 370
Cdd:pfam01419   1 GASWDDGVYDGVRKVYVGQGGDGITYIKFEYVKGGGKVEGDEHGKKGLLGPEEFEIDYPdEYITSVEGTYDKVFGSDSEV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 145330691  371 IVCLQFKTNKRE-SMPFGMDSGKKFSLGEEGHKIVGFHGQASDVVHSIGVTIVP 423
Cdd:pfam01419  81 ITSLTFKTNKGRtSPFFGTPSGTKFSLEVKGKKIVGFHGRAGNALNALGAYFAP 134
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 141-271 1.22e-49

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 164.76  E-value: 1.22e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691  141 GRVWDDGSYDGIKTLRIDQDNSRITYLEVEYEK-DGEAKTCNHGGKGDT-PSEFVLGYPDEYIKSVEATYQKPNIFSNTA 218
Cdd:pfam01419   1 GASWDDGVYDGVRKVYVGQGGDGITYIKFEYVKgGGKVEGDEHGKKGLLgPEEFEIDYPDEYITSVEGTYDKVFGSDSEV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 145330691  219 ITSLKFLTSKGRTS-FFGYNVGKKFVLEQKGHRLVGFHGKEDAAIDALGAYFGP 271
Cdd:pfam01419  81 ITSLTFKTNKGRTSpFFGTPSGTKFSLEVKGKKIVGFHGRAGNALNALGAYFAP 134
PLN02193 PLN02193
nitrile-specifier protein
 281-421 1.44e-42

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 155.88  E-value: 1.44e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691 281 SKKLPAIGGNEGVTWDDGVYDGVRKILVGQGNDGVSFVKFEYSKGKDLVPGDDHGKKTLLGAEEFVLEDGEYLMNIDGYY 360
Cdd:PLN02193   2 AQKLEAKGGETGDVWDDGVYDNVRKVYVGQGQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEIDADDYIVYVEGYR 81

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 145330691 361 DKIFGVEEPIIVCLQFKTNK-RESMPFGMDSGKKFSLgeEGHKIVGFHGQASDVVHSIGVTI 421
Cdd:PLN02193  82 EKVNDMTSEMITFLSFKTYKgKTSHPIEKRPGVKFVL--QGGKIVGFHGRSTDVLHSLGAYI 141
Jacalin smart00915
Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a ...
 141-271 1.85e-41

Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry. Some lectins in this group stimulate distinct T- and B- cell functions, such as Jacalin, which binds to the T-antigen and acts as an agglutinin. This domain is found in 1 to 6 copies in lectins. The domain is also found in the salt-stress induced protein from rice and an animal prostatic spermine-binding protein.


Pssm-ID: 214909 [Multi-domain]  Cd Length: 128  Bit Score: 143.14  E-value: 1.85e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691   141 GRVWDDGSYDGIKTLRIDQDNSRITYLEVEYEKDGEAKTCNHGGKGDTPSEFVLgYPDEYIKSVEATYQKPNIfsntaIT 220
Cdd:smart00915   1 GTEWDDGAFDGVRKIYVGQGGEGIKSIQFDYDKGGKVWGDEHGGKGGTGEEILL-YPGEYITSVEGTYDKSGV-----IT 74

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 145330691   221 SLKFLTSKGRTS-FFGYNVGKKFVLE-QKGHRLVGFHG-KEDAAIDALGAYFGP 271
Cdd:smart00915  75 SLTFKTNKGRTSpFGGYEGGTKFVLEsKEGKKIVGFHGrSSGDGLDSLGAYFSP 128
Jacalin smart00915
Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a ...
 292-423 3.60e-41

Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry. Some lectins in this group stimulate distinct T- and B- cell functions, such as Jacalin, which binds to the T-antigen and acts as an agglutinin. This domain is found in 1 to 6 copies in lectins. The domain is also found in the salt-stress induced protein from rice and an animal prostatic spermine-binding protein.


Pssm-ID: 214909 [Multi-domain]  Cd Length: 128  Bit Score: 142.37  E-value: 3.60e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691   292 GVTWDDGVYDGVRKILVGQGNDGVSFVKFEYSKGKDLVpGDDHGKKTLLGaEEFVLEDGEYLMNIDGYYDKIfgveePII 371
Cdd:smart00915   1 GTEWDDGAFDGVRKIYVGQGGEGIKSIQFDYDKGGKVW-GDEHGGKGGTG-EEILLYPGEYITSVEGTYDKS-----GVI 73

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 145330691   372 VCLQFKTNK-RESMPFGMDSGKKFSLG-EEGHKIVGFHGQAS-DVVHSIGVTIVP 423
Cdd:smart00915  74 TSLTFKTNKgRTSPFGGYEGGTKFVLEsKEGKKIVGFHGRSSgDGLDSLGAYFSP 128
Jacalin cd09612
Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains ...
 141-269 1.71e-40

Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. The family was initially named after an abundant protein found in the jackfruit seed. Jacalin specifically binds to the alpha-O-glycoside of the disaccharide Gal-beta1-3-GalNAc, and has proven useful in the study of O-linked glycoproteins. Jacalin-like lectins in this family may occur in various oligomerization states.


Pssm-ID: 187708 [Multi-domain]  Cd Length: 130  Bit Score: 140.78  E-value: 1.71e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691 141 GRVWDDGSY-DGIKTLRIDQDNSRITYLEVEYEKDGE-AKTCNHGGKGDTPSEFVLGYPDEYIKSVEATYQKpnIFSNTA 218
Cdd:cd09612    1 GSAWDDGVFpDGLRKITVRSGENGIDSIKFEYDKDGQhVVGPWHGGGGGTPEEIVLDYPDEYITSVSGTYGP--VSGSNV 78

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 145330691 219 ITSLKFLTSKGRTSFFGYNVGKKFVLEQKGHRLVGFHGKEDAAIDALGAYF 269
Cdd:cd09612   79 ITSLTFKTNKRTYGPFGVESGTPFSLPVEGGKIVGFHGRSGDYLDAIGVYV 129
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 16-122 2.53e-38

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 135.10  E-value: 2.53e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691   16 GQEWDDDVYEGVRKVYVGQDLNRITYIKFEYVQEDGEVVTTEYGT-TNQHPKEFVIQYPDEHIIAVEGSYHQVALIATEV 94
Cdd:pfam01419   1 GASWDDGVYDGVRKVYVGQGGDGITYIKFEYVKGGGKVEGDEHGKkGLLGPEEFEIDYPDEYITSVEGTYDKVFGSDSEV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 145330691   95 ITSLVFKTSK-------------------------GFHGRAGDAVDALGVYFV 122
Cdd:pfam01419  81 ITSLTFKTNKgrtspffgtpsgtkfslevkgkkivGFHGRAGNALNALGAYFA 133
Jacalin cd09612
Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains ...
 292-419 4.58e-38

Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. The family was initially named after an abundant protein found in the jackfruit seed. Jacalin specifically binds to the alpha-O-glycoside of the disaccharide Gal-beta1-3-GalNAc, and has proven useful in the study of O-linked glycoproteins. Jacalin-like lectins in this family may occur in various oligomerization states.


Pssm-ID: 187708 [Multi-domain]  Cd Length: 130  Bit Score: 134.23  E-value: 4.58e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691 292 GVTWDDGVY-DGVRKILVGQGNDGVSFVKFEYSKGKDLVPGDDHGKKTLlGAEEFVLED-GEYLMNIDGYYDKIFGVeeP 369
Cdd:cd09612    1 GSAWDDGVFpDGLRKITVRSGENGIDSIKFEYDKDGQHVVGPWHGGGGG-TPEEIVLDYpDEYITSVSGTYGPVSGS--N 77

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 145330691 370 IIVCLQFKTNKRESMPFGMDSGKKFSLGEEGHKIVGFHGQASDVVHSIGV 419
Cdd:cd09612   78 VITSLTFKTNKRTYGPFGVESGTPFSLPVEGGKIVGFHGRSGDYLDAIGV 127
Jacalin cd09612
Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains ...
 16-121 1.57e-30

Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. The family was initially named after an abundant protein found in the jackfruit seed. Jacalin specifically binds to the alpha-O-glycoside of the disaccharide Gal-beta1-3-GalNAc, and has proven useful in the study of O-linked glycoproteins. Jacalin-like lectins in this family may occur in various oligomerization states.


Pssm-ID: 187708 [Multi-domain]  Cd Length: 130  Bit Score: 114.20  E-value: 1.57e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691  16 GQEWDDDVY-EGVRKVYVGQDLNRITYIKFEYVQEDGEVVTTEYGTTNQHPKEFVIQYPDEHIIAVEGSYHQVAliATEV 94
Cdd:cd09612    1 GSAWDDGVFpDGLRKITVRSGENGIDSIKFEYDKDGQHVVGPWHGGGGGTPEEIVLDYPDEYITSVSGTYGPVS--GSNV 78

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 145330691  95 ITSLVFKTSK------------------------GFHGRAGDAVDALGVYF 121
Cdd:cd09612   79 ITSLTFKTNKrtygpfgvesgtpfslpveggkivGFHGRSGDYLDAIGVYV 129
Jacalin smart00915
Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a ...
 16-121 3.04e-30

Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry. Some lectins in this group stimulate distinct T- and B- cell functions, such as Jacalin, which binds to the T-antigen and acts as an agglutinin. This domain is found in 1 to 6 copies in lectins. The domain is also found in the salt-stress induced protein from rice and an animal prostatic spermine-binding protein.


Pssm-ID: 214909 [Multi-domain]  Cd Length: 128  Bit Score: 113.48  E-value: 3.04e-30
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691    16 GQEWDDDVYEGVRKVYVGQDLNRITYIKFEYVQeDGEVVTTEYGTTNQHpKEFVIQYPDEHIIAVEGSYHQvaliaTEVI 95
Cdd:smart00915   1 GTEWDDGAFDGVRKIYVGQGGEGIKSIQFDYDK-GGKVWGDEHGGKGGT-GEEILLYPGEYITSVEGTYDK-----SGVI 73

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 145330691    96 TSLVFKTSK--------------------------GFHGR-AGDAVDALGVYF 121
Cdd:smart00915  74 TSLTFKTNKgrtspfggyeggtkfvleskegkkivGFHGRsSGDGLDSLGAYF 126
PLN02193 PLN02193
nitrile-specifier protein
 4-127 8.53e-24

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 103.11  E-value: 8.53e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691   4 MYRKLALCGGEGGQEWDDDVYEGVRKVYVGQDLNRITYIKFEYVQEDGEVVTTEYGT-TNQHPKEFVIQyPDEHIIAVEG 82
Cdd:PLN02193   1 MAQKLEAKGGETGDVWDDGVYDNVRKVYVGQGQYGIAFVKFEYVNGSQVVVGDEHGKkTELGVEEFEID-ADDYIVYVEG 79

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 145330691  83 SYHQVALIATEVITSLVFKTSK-----------------------GFHGRAGDAVDALGVYFVLDTTP 127
Cdd:PLN02193  80 YREKVNDMTSEMITFLSFKTYKgktshpiekrpgvkfvlqggkivGFHGRSTDVLHSLGAYISLPSTP 147
 
Name Accession Description Interval E-value
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 292-423 7.04e-55

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 178.24  E-value: 7.04e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691  292 GVTWDDGVYDGVRKILVGQGNDGVSFVKFEYSKGKDLVPGDDHGKKTLLGAEEFVLEDG-EYLMNIDGYYDKIFGVEEPI 370
Cdd:pfam01419   1 GASWDDGVYDGVRKVYVGQGGDGITYIKFEYVKGGGKVEGDEHGKKGLLGPEEFEIDYPdEYITSVEGTYDKVFGSDSEV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 145330691  371 IVCLQFKTNKRE-SMPFGMDSGKKFSLGEEGHKIVGFHGQASDVVHSIGVTIVP 423
Cdd:pfam01419  81 ITSLTFKTNKGRtSPFFGTPSGTKFSLEVKGKKIVGFHGRAGNALNALGAYFAP 134
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 141-271 1.22e-49

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 164.76  E-value: 1.22e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691  141 GRVWDDGSYDGIKTLRIDQDNSRITYLEVEYEK-DGEAKTCNHGGKGDT-PSEFVLGYPDEYIKSVEATYQKPNIFSNTA 218
Cdd:pfam01419   1 GASWDDGVYDGVRKVYVGQGGDGITYIKFEYVKgGGKVEGDEHGKKGLLgPEEFEIDYPDEYITSVEGTYDKVFGSDSEV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 145330691  219 ITSLKFLTSKGRTS-FFGYNVGKKFVLEQKGHRLVGFHGKEDAAIDALGAYFGP 271
Cdd:pfam01419  81 ITSLTFKTNKGRTSpFFGTPSGTKFSLEVKGKKIVGFHGRAGNALNALGAYFAP 134
PLN02193 PLN02193
nitrile-specifier protein
 281-421 1.44e-42

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 155.88  E-value: 1.44e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691 281 SKKLPAIGGNEGVTWDDGVYDGVRKILVGQGNDGVSFVKFEYSKGKDLVPGDDHGKKTLLGAEEFVLEDGEYLMNIDGYY 360
Cdd:PLN02193   2 AQKLEAKGGETGDVWDDGVYDNVRKVYVGQGQYGIAFVKFEYVNGSQVVVGDEHGKKTELGVEEFEIDADDYIVYVEGYR 81

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 145330691 361 DKIFGVEEPIIVCLQFKTNK-RESMPFGMDSGKKFSLgeEGHKIVGFHGQASDVVHSIGVTI 421
Cdd:PLN02193  82 EKVNDMTSEMITFLSFKTYKgKTSHPIEKRPGVKFVL--QGGKIVGFHGRSTDVLHSLGAYI 141
Jacalin smart00915
Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a ...
 141-271 1.85e-41

Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry. Some lectins in this group stimulate distinct T- and B- cell functions, such as Jacalin, which binds to the T-antigen and acts as an agglutinin. This domain is found in 1 to 6 copies in lectins. The domain is also found in the salt-stress induced protein from rice and an animal prostatic spermine-binding protein.


Pssm-ID: 214909 [Multi-domain]  Cd Length: 128  Bit Score: 143.14  E-value: 1.85e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691   141 GRVWDDGSYDGIKTLRIDQDNSRITYLEVEYEKDGEAKTCNHGGKGDTPSEFVLgYPDEYIKSVEATYQKPNIfsntaIT 220
Cdd:smart00915   1 GTEWDDGAFDGVRKIYVGQGGEGIKSIQFDYDKGGKVWGDEHGGKGGTGEEILL-YPGEYITSVEGTYDKSGV-----IT 74

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....
gi 145330691   221 SLKFLTSKGRTS-FFGYNVGKKFVLE-QKGHRLVGFHG-KEDAAIDALGAYFGP 271
Cdd:smart00915  75 SLTFKTNKGRTSpFGGYEGGTKFVLEsKEGKKIVGFHGrSSGDGLDSLGAYFSP 128
Jacalin smart00915
Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a ...
 292-423 3.60e-41

Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry. Some lectins in this group stimulate distinct T- and B- cell functions, such as Jacalin, which binds to the T-antigen and acts as an agglutinin. This domain is found in 1 to 6 copies in lectins. The domain is also found in the salt-stress induced protein from rice and an animal prostatic spermine-binding protein.


Pssm-ID: 214909 [Multi-domain]  Cd Length: 128  Bit Score: 142.37  E-value: 3.60e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691   292 GVTWDDGVYDGVRKILVGQGNDGVSFVKFEYSKGKDLVpGDDHGKKTLLGaEEFVLEDGEYLMNIDGYYDKIfgveePII 371
Cdd:smart00915   1 GTEWDDGAFDGVRKIYVGQGGEGIKSIQFDYDKGGKVW-GDEHGGKGGTG-EEILLYPGEYITSVEGTYDKS-----GVI 73

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 145330691   372 VCLQFKTNK-RESMPFGMDSGKKFSLG-EEGHKIVGFHGQAS-DVVHSIGVTIVP 423
Cdd:smart00915  74 TSLTFKTNKgRTSPFGGYEGGTKFVLEsKEGKKIVGFHGRSSgDGLDSLGAYFSP 128
Jacalin cd09612
Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains ...
 141-269 1.71e-40

Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. The family was initially named after an abundant protein found in the jackfruit seed. Jacalin specifically binds to the alpha-O-glycoside of the disaccharide Gal-beta1-3-GalNAc, and has proven useful in the study of O-linked glycoproteins. Jacalin-like lectins in this family may occur in various oligomerization states.


Pssm-ID: 187708 [Multi-domain]  Cd Length: 130  Bit Score: 140.78  E-value: 1.71e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691 141 GRVWDDGSY-DGIKTLRIDQDNSRITYLEVEYEKDGE-AKTCNHGGKGDTPSEFVLGYPDEYIKSVEATYQKpnIFSNTA 218
Cdd:cd09612    1 GSAWDDGVFpDGLRKITVRSGENGIDSIKFEYDKDGQhVVGPWHGGGGGTPEEIVLDYPDEYITSVSGTYGP--VSGSNV 78

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 145330691 219 ITSLKFLTSKGRTSFFGYNVGKKFVLEQKGHRLVGFHGKEDAAIDALGAYF 269
Cdd:cd09612   79 ITSLTFKTNKRTYGPFGVESGTPFSLPVEGGKIVGFHGRSGDYLDAIGVYV 129
Jacalin pfam01419
Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 ...
 16-122 2.53e-38

Jacalin-like lectin domain; Proteins containing this domain are lectins. It is found in 1 to 6 copies in these proteins. The domain is also found in the animal prostatic spermine-binding protein.


Pssm-ID: 396138 [Multi-domain]  Cd Length: 134  Bit Score: 135.10  E-value: 2.53e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691   16 GQEWDDDVYEGVRKVYVGQDLNRITYIKFEYVQEDGEVVTTEYGT-TNQHPKEFVIQYPDEHIIAVEGSYHQVALIATEV 94
Cdd:pfam01419   1 GASWDDGVYDGVRKVYVGQGGDGITYIKFEYVKGGGKVEGDEHGKkGLLGPEEFEIDYPDEYITSVEGTYDKVFGSDSEV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 145330691   95 ITSLVFKTSK-------------------------GFHGRAGDAVDALGVYFV 122
Cdd:pfam01419  81 ITSLTFKTNKgrtspffgtpsgtkfslevkgkkivGFHGRAGNALNALGAYFA 133
Jacalin cd09612
Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains ...
 292-419 4.58e-38

Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. The family was initially named after an abundant protein found in the jackfruit seed. Jacalin specifically binds to the alpha-O-glycoside of the disaccharide Gal-beta1-3-GalNAc, and has proven useful in the study of O-linked glycoproteins. Jacalin-like lectins in this family may occur in various oligomerization states.


Pssm-ID: 187708 [Multi-domain]  Cd Length: 130  Bit Score: 134.23  E-value: 4.58e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691 292 GVTWDDGVY-DGVRKILVGQGNDGVSFVKFEYSKGKDLVPGDDHGKKTLlGAEEFVLED-GEYLMNIDGYYDKIFGVeeP 369
Cdd:cd09612    1 GSAWDDGVFpDGLRKITVRSGENGIDSIKFEYDKDGQHVVGPWHGGGGG-TPEEIVLDYpDEYITSVSGTYGPVSGS--N 77

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 145330691 370 IIVCLQFKTNKRESMPFGMDSGKKFSLGEEGHKIVGFHGQASDVVHSIGV 419
Cdd:cd09612   78 VITSLTFKTNKRTYGPFGVESGTPFSLPVEGGKIVGFHGRSGDYLDAIGV 127
Jacalin cd09612
Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains ...
 16-121 1.57e-30

Jacalin-like plant lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. The family was initially named after an abundant protein found in the jackfruit seed. Jacalin specifically binds to the alpha-O-glycoside of the disaccharide Gal-beta1-3-GalNAc, and has proven useful in the study of O-linked glycoproteins. Jacalin-like lectins in this family may occur in various oligomerization states.


Pssm-ID: 187708 [Multi-domain]  Cd Length: 130  Bit Score: 114.20  E-value: 1.57e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691  16 GQEWDDDVY-EGVRKVYVGQDLNRITYIKFEYVQEDGEVVTTEYGTTNQHPKEFVIQYPDEHIIAVEGSYHQVAliATEV 94
Cdd:cd09612    1 GSAWDDGVFpDGLRKITVRSGENGIDSIKFEYDKDGQHVVGPWHGGGGGTPEEIVLDYPDEYITSVSGTYGPVS--GSNV 78

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 145330691  95 ITSLVFKTSK------------------------GFHGRAGDAVDALGVYF 121
Cdd:cd09612   79 ITSLTFKTNKrtygpfgvesgtpfslpveggkivGFHGRSGDYLDAIGVYV 129
Jacalin smart00915
Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a ...
 16-121 3.04e-30

Jacalin-like lectin domain; This entry represents a mannose-binding lectin domain with a beta-prism fold consisting of three 4-stranded beta-sheets, with an internal pseudo 3-fold symmetry. Some lectins in this group stimulate distinct T- and B- cell functions, such as Jacalin, which binds to the T-antigen and acts as an agglutinin. This domain is found in 1 to 6 copies in lectins. The domain is also found in the salt-stress induced protein from rice and an animal prostatic spermine-binding protein.


Pssm-ID: 214909 [Multi-domain]  Cd Length: 128  Bit Score: 113.48  E-value: 3.04e-30
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691    16 GQEWDDDVYEGVRKVYVGQDLNRITYIKFEYVQeDGEVVTTEYGTTNQHpKEFVIQYPDEHIIAVEGSYHQvaliaTEVI 95
Cdd:smart00915   1 GTEWDDGAFDGVRKIYVGQGGEGIKSIQFDYDK-GGKVWGDEHGGKGGT-GEEILLYPGEYITSVEGTYDK-----SGVI 73

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 145330691    96 TSLVFKTSK--------------------------GFHGR-AGDAVDALGVYF 121
Cdd:smart00915  74 TSLTFKTNKgrtspfggyeggtkfvleskegkkivGFHGRsSGDGLDSLGAYF 126
PLN02193 PLN02193
nitrile-specifier protein
 4-127 8.53e-24

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 103.11  E-value: 8.53e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691   4 MYRKLALCGGEGGQEWDDDVYEGVRKVYVGQDLNRITYIKFEYVQEDGEVVTTEYGT-TNQHPKEFVIQyPDEHIIAVEG 82
Cdd:PLN02193   1 MAQKLEAKGGETGDVWDDGVYDNVRKVYVGQGQYGIAFVKFEYVNGSQVVVGDEHGKkTELGVEEFEID-ADDYIVYVEG 79

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 145330691  83 SYHQVALIATEVITSLVFKTSK-----------------------GFHGRAGDAVDALGVYFVLDTTP 127
Cdd:PLN02193  80 YREKVNDMTSEMITFLSFKTYKgktshpiekrpgvkfvlqggkivGFHGRSTDVLHSLGAYISLPSTP 147
Jacalin_EEP cd09615
Jacalin-like lectin domains of putative endonucleases/exonucleases/phosphatases and related ...
 175-272 4.87e-08

Jacalin-like lectin domains of putative endonucleases/exonucleases/phosphatases and related proteins; Members of this taxonomically diverse family co-occur with metal-dependent endonucleases/exonucleases/phosphatases. They have not been functionally characterized.


Pssm-ID: 187711  Cd Length: 134  Bit Score: 51.63  E-value: 4.87e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691 175 GEAKTCNHGGKGDTPSEFVLGyPDEYIKSVEATYQKPNifSNTAITSLKFLTSKGRTSFFGYNVGKKFVLEQK-GHRLVG 253
Cdd:cd09615   39 TAGTTLAHGGTGGTASSLTLG-SGEYLTSATLCQGQKN--GHTRIFYASFTTSTGRTLAGGTTTSDCVTYTAPeGWQIVG 115

                         90
                 ....*....|....*....
gi 145330691 254 FHGKEDAAIDALGAYFGPV 272
Cdd:cd09615  116 FHGRAGDEVDKLGVIYAPQ 134
Jacalin_like cd09302
Jacalin-like lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly ...
 318-420 4.95e-08

Jacalin-like lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. Taxonomic distribution is not restricted to plants, the domain is also found in various mammalian proteins, for example.


Pssm-ID: 187706  Cd Length: 128  Bit Score: 51.25  E-value: 4.95e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691 318 VKFEYSKGKDLVPGDDHGKKTllgaEEFVLEDGEYLMNIDGYYDKIFGVEepIIVCLQFKTNKRESMPFGMDSGK---KF 394
Cdd:cd09302   28 IRVVLRDYTDGRHGGNGGPNT----SSVFLDPGEYITITSVSSGDNGGGT--RIDAIQFTTNKGRSGTYGTTSGAlgtEF 101

                         90       100
                 ....*....|....*....|....*.
gi 145330691 395 SLGEeGHKIVGFHGQASDVVHSIGVT 420
Cdd:cd09302  102 TVPV-GGEIVGIYGRAGDDVDAFGFI 126
Jacalin_ZG16_like cd09611
Jacalin-like lectin domain of the zymogen granule protein 16 and related proteins; ZG16p is a ...
 152-270 1.36e-06

Jacalin-like lectin domain of the zymogen granule protein 16 and related proteins; ZG16p is a conserved secreted vertebrate protein with tissue-specific expression profiles, which might play a role in glycoprotein secretion, perhaps as a linker protein that participates in the formation and/or transport of the zymogen granule. Its paralog ZG16b (PAUF) has been associated with roles in gene regulation and cancer. This domain family also contains mammalian proteins labelled as prostatic spermine-binding protein (SBP) and salivary-gland specific secreted proteins.


Pssm-ID: 187707 [Multi-domain]  Cd Length: 128  Bit Score: 47.32  E-value: 1.36e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691 152 IKTLRIDQDNSRITYLEVEYekdGEAKTCNHGGKGDTPSEFVLGyPDEYIKSVEATYQkpnifsnTAITSLKFLTSKGRT 231
Cdd:cd09611   18 ITGIRVSVGNNYIKGIQVRY---GSNWSDVYGGRGGNEQEIVLE-PGESITKVSGSYK-------IYLHGLVFTTNKGRY 86

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 145330691 232 SFFGYNVGKKFVLE--QKGHRLVGFHGKEDAA-IDALGAYFG 270
Cdd:cd09611   87 LSFGKLRGRSFNATppPSNYVLRGISGRYGGLgIKSIGFHWG 128
Jacalin_ZG16_like cd09611
Jacalin-like lectin domain of the zymogen granule protein 16 and related proteins; ZG16p is a ...
 303-418 4.13e-05

Jacalin-like lectin domain of the zymogen granule protein 16 and related proteins; ZG16p is a conserved secreted vertebrate protein with tissue-specific expression profiles, which might play a role in glycoprotein secretion, perhaps as a linker protein that participates in the formation and/or transport of the zymogen granule. Its paralog ZG16b (PAUF) has been associated with roles in gene regulation and cancer. This domain family also contains mammalian proteins labelled as prostatic spermine-binding protein (SBP) and salivary-gland specific secreted proteins.


Pssm-ID: 187707 [Multi-domain]  Cd Length: 128  Bit Score: 43.08  E-value: 4.13e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691 303 VRKILVGQGNDGVSFVKFEYSKGKDLVPGDDHGKKtllgaEEFVLEDGEYLMNIDGYYDkifgveePIIVCLQFKTNKRE 382
Cdd:cd09611   18 ITGIRVSVGNNYIKGIQVRYGSNWSDVYGGRGGNE-----QEIVLEPGESITKVSGSYK-------IYLHGLVFTTNKGR 85

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 145330691 383 SMPFGMDSGKKF--SLGEEGHKIVGFHGQAS-DVVHSIG 418
Cdd:cd09611   86 YLSFGKLRGRSFnaTPPPSNYVLRGISGRYGgLGIKSIG 124
Jacalin_like cd09302
Jacalin-like lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly ...
 181-266 2.07e-04

Jacalin-like lectin domain; Jacalin-like lectins are sugar-binding protein domains mostly found in plants. They adopt a beta-prism topology consistent with a circularly permuted three-fold repeat of a structural motif. Proteins containing this domain may bind mono- or oligosaccharides with high specificity. The domain can occur in tandem-repeat arrangements with up to six copies, and in architectures combined with a variety of other functional domains. Taxonomic distribution is not restricted to plants, the domain is also found in various mammalian proteins, for example.


Pssm-ID: 187706  Cd Length: 128  Bit Score: 40.85  E-value: 2.07e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691 181 NHGGKG-DTPSEFVLGyPDEYIKSVEATYQkpNIFSNTAITSLKFLTSKGRTSFFG---YNVGKKFVLeQKGHRLVGFHG 256
Cdd:cd09302   39 RHGGNGgPNTSSVFLD-PGEYITITSVSSG--DNGGGTRIDAIQFTTNKGRSGTYGttsGALGTEFTV-PVGGEIVGIYG 114

                         90
                 ....*....|
gi 145330691 257 KEDAAIDALG 266
Cdd:cd09302  115 RAGDDVDAFG 124
Jacalin_ZG16_like cd09611
Jacalin-like lectin domain of the zymogen granule protein 16 and related proteins; ZG16p is a ...
 21-133 8.65e-04

Jacalin-like lectin domain of the zymogen granule protein 16 and related proteins; ZG16p is a conserved secreted vertebrate protein with tissue-specific expression profiles, which might play a role in glycoprotein secretion, perhaps as a linker protein that participates in the formation and/or transport of the zymogen granule. Its paralog ZG16b (PAUF) has been associated with roles in gene regulation and cancer. This domain family also contains mammalian proteins labelled as prostatic spermine-binding protein (SBP) and salivary-gland specific secreted proteins.


Pssm-ID: 187707 [Multi-domain]  Cd Length: 128  Bit Score: 39.23  E-value: 8.65e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691  21 DDVYEGVRKVYVGQDLNRITYIKFEYvqedGEVVTTEYGTTNQHPKEFVIQyPDEHIIAVEGSYHqvaliatEVITSLVF 100
Cdd:cd09611   12 GEGGGPITGIRVSVGNNYIKGIQVRY----GSNWSDVYGGRGGNEQEIVLE-PGESITKVSGSYK-------IYLHGLVF 79

                         90       100       110
                 ....*....|....*....|....*....|...
gi 145330691 101 KTSKGFHGRAGDAVdalGVYFVlDTTPFPLYKL 133
Cdd:cd09611   80 TTNKGRYLSFGKLR---GRSFN-ATPPPSNYVL 108
griffithsin_like cd09614
Jacalin-like lectin domain of griffithsin and related proteins; Griffithsin is a lectin ...
 162-270 2.89e-03

Jacalin-like lectin domain of griffithsin and related proteins; Griffithsin is a lectin isolated from a red alga, which has shown potential as an inhibitor of viral entry, exhibiting antiviral activity against HIV and SARS. The biological functions of griffithsin and griffithsin-like proteins with respect to their source organisms are not known.


Pssm-ID: 187710  Cd Length: 128  Bit Score: 37.76  E-value: 2.89e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330691 162 SRITYLEVEYEKDGEAKTCNHGGKGDTPSEFVLGYPDEYIKSVEATYqkpnifsNTAITSLKFLTSKGRTSF-FGYNVGK 240
Cdd:cd09614   24 SYVDQIITDYQDLNGTQNFHHGGGGGNLSPTLNFSSGEYITEVTGRS-------GDRVDQVQFTTNYGGRTLpGGGGGGS 96

                         90       100       110
                 ....*....|....*....|....*....|.
gi 145330691 241 KFVLE-QKGHRLVGFHGKEDAAIDALGAYFG 270
Cdd:cd09614   97 AFTWTvPDNQKVIGFAGRSGSYLDQLQVYYL 127
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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